>Q5EAR6:CC115_DANRE Coiled-coil domain-containing protein 115 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 206
 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
 Frame = +3

Query: 435 ILRFMDSADGYLLLMDSLSSALRQGWLDLASARHSMGASRVSSTLFDHKEQSAATTLQVV 614
           +L FM+  +        L+S + +GW  +A AR+SMG  +VS+  +  + Q  A     +
Sbjct: 13  LLLFMEQLEALEEKRQRLNSLIEEGWFSIAKARYSMGNKQVSALQYASEMQPLAHVETSL 72

Query: 615 YPADLPPSESNPHFSLSKWCLKEESNSSDIVSAQDSVTTKLRYRGSAATPD-SSNESDAT 791
                        F   +   K E   +  +    +  T LR R      +    E D  
Sbjct: 73  LEG------GTAEFKCERSENKAEEQKTKTIEDIGAKETGLRRRVHTKQKEVKEGEQDTD 126

Query: 792 TAKSSTGVDANSQVQKARSKALSVFGALVSPKLRTAQISFETALELIVELANSRSAILSS 971
             K+ T    +S   + R+  L  FG LV   L+ AQ +F+  + L VE+A+ +S IL++
Sbjct: 127 EVKTKT----DSPTPEHRN-PLKWFGILVPQNLKQAQSAFKEVITLSVEIASLQSTILAT 181

>Q3SZB5:CC115_BOVIN Coiled-coil domain-containing protein 115 - Bos taurus (Bovine)|
          Length = 180

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 2/169 (1%)
 Frame = +3

Query: 483 SLSSALRQGWLDLASARHSMGASRVSSTLF-DHKEQSAATTLQVVYPADLPPSESNPHFS 659
           +L++ + +GWL L+ AR++MGA  V    +  H E                   S     
Sbjct: 30  ALNARVEEGWLSLSKARYAMGAKSVGPLQYASHMEPQVRV------------GTSESQDG 77

Query: 660 LSK-WCLKEESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANSQVQ 836
           L K W ++  + + + V ++++   + +       PDSS                     
Sbjct: 78  LQKFWMVRAGTQTPEEVGSREAALRRRKGLPRTPEPDSS--------------------- 116

Query: 837 KARSKALSVFGALVSPKLRTAQISFETALELIVELANSRSAILSSFSQI 983
            A    L  FG LV   LR AQ SF   L+L  ++A+ +S I    SQ+
Sbjct: 117 PAPQNPLKWFGILVPHSLRQAQASFREGLQLAADMASLQSRITWGQSQL 165

>O42970:YB95_SCHPO Uncharacterized serine-rich protein C1E8.05 precursor -|
           Schizosaccharomyces pombe (Fission yeast)
          Length = 317

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
 Frame = +3

Query: 483 SLSSALRQGWLDLASARHSMGASRVSSTLFDHKEQSAATTLQVVYPADLPPSESNPHFSL 662
           S SS    G +   S   SM  +R SS+ F     S  ++           S S+P  S 
Sbjct: 117 STSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSS-------SSSSSSPSSSS 169

Query: 663 SKWCLKEESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESDA-TTAKSSTGVDANSQVQK 839
           SK     +S+SS   S++ S ++    + S+++  SS  S + +++KSS+   ++S +  
Sbjct: 170 SKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITS 229

Query: 840 ARSKALSVFGALVSPKLRTAQI----SFETALELIVELANSRSAILSS 971
               + S  GA+VS   +TA      S  +A   +  + +S S+ LS+
Sbjct: 230 TTPASSSSSGAIVS-NAKTASTDDSSSASSATSSVSSVVSSASSALSA 276

>Q8VQ99:SRAP_STAAU Serine-rich adhesin for platelets precursor - Staphylococcus aureus|
          Length = 2283

 Score = 38.1 bits (87), Expect = 0.079
 Identities = 38/163 (23%), Positives = 74/163 (45%)
 Frame = +3

Query: 480  DSLSSALRQGWLDLASARHSMGASRVSSTLFDHKEQSAATTLQVVYPADLPPSESNPHFS 659
            DS S++L       AS + S   S+ +ST   +  QS +T++++        SES     
Sbjct: 1523 DSSSTSLSDS--TSASMQSSESDSQSTSTSLSNS-QSTSTSIRMSTIVSESVSESTSESG 1579

Query: 660  LSKWCLKEESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANSQVQK 839
             +     E  ++S  +S   S +      GSA+T  S+++S +T+A +ST +  ++   +
Sbjct: 1580 STSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSAPTSTSMRTSTLDSQ 1639

Query: 840  ARSKALSVFGALVSPKLRTAQISFETALELIVELANSRSAILS 968
            + S + S   ++      +  +S  T+       + S SA +S
Sbjct: 1640 SMSLSTSTSTSVSDSTSLSDSVSDSTSDSTSTSTSGSMSASIS 1682

>Q99ML9:RN111_MOUSE E3 ubiquitin-protein ligase Arkadia - Mus musculus (Mouse)|
          Length = 989

 Score = 34.7 bits (78), Expect = 0.87
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
 Frame = +3

Query: 531 RHSMGASRVSSTLFDHKEQSAATTLQVVYPADLP---PSESNPHFSLSKWCLKEESNSSD 701
           + S   SR+S T+     Q+AA  + +    D P   P+ S    S +       SN S 
Sbjct: 358 QESRNRSRIS-TVIQPLRQNAAEVVDLTVDEDEPTIVPTTSARMDSQTTSASINNSNPST 416

Query: 702 IVSAQDSVTTKLRYRGSAATPDSSNESDAT-TAKSSTGVDANSQVQKARSKALSVFGALV 878
              A D+ +T      +++ P + +E++AT T+ S+TG      V++  S A+   G   
Sbjct: 417 SEQASDTTSTV-----ASSQPSTVSETEATLTSNSATGSSVGDDVRRTASSAVPESGPPA 471

Query: 879 SPKL 890
            P+L
Sbjct: 472 MPRL 475

>Q03568:YLD3_CAEEL Uncharacterized protein C38C10.3 - Caenorhabditis elegans|
          Length = 301

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +3

Query: 618 PADLPPSESNPHFSLSKWCLKEESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESD 785
           P DL    + PH ++         NSS +VS   S T+  R R + A P SS+ESD
Sbjct: 78  PKDLNKMTAGPHIAVK--------NSSGLVSQISSTTSSERKRRTLARPSSSSESD 125

>Q8IXI1:MIRO2_HUMAN Mitochondrial Rho GTPase 2 - Homo sapiens (Human)|
          Length = 618

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 989  WSMICYLSLRFCTLAHHLSYLGYQQLCNQ 1075
            W+++ YL +R C    HL YLGY  LC Q
Sbjct: 365  WTLVTYLDVRSCL--GHLGYLGYPTLCEQ 391

>Q74ZH9:GDE1_ASHGO Glycerophosphodiester phosphodiesterase GDE1 - Ashbya gossypii|
           (Yeast) (Eremothecium gossypii)
          Length = 1321

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 708 SAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANSQVQKARSK 851
           S   S TT    + S+ TP +SNE  A  A+SST +D  S+  K   +
Sbjct: 653 SESGSTTTGSENKSSSLTPSTSNEMYALPARSSTSIDKISEPNKGNHR 700

>Q7TSA0:MIRO2_RAT Mitochondrial Rho GTPase 2 - Rattus norvegicus (Rat)|
          Length = 622

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 989  WSMICYLSLRFCTLAHHLSYLGYQQLCNQ 1075
            W+++ YL ++ C    HL YLGY  LC Q
Sbjct: 365  WTLVTYLDVQHCLA--HLGYLGYPTLCEQ 391

>P47033:PRY3_YEAST Protein PRY3 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 881

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 35/153 (22%), Positives = 63/153 (41%)
 Frame = +3

Query: 519 LASARHSMGASRVSSTLFDHKEQSAATTLQVVYPADLPPSESNPHFSLSKWCLKEESNSS 698
           + S+  S+G+S VSS        S AT+   V  +D   S +    + S       + SS
Sbjct: 231 ITSSTESVGSSTVSSASSSSVTTSYATSSSTVVSSDATSSTT----TTSSVATSSSTTSS 286

Query: 699 DIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANSQVQKARSKALSVFGALV 878
           D  S+  + ++      SAA   SS+ S    A SS+ + ++S +  A   +        
Sbjct: 287 DPTSSTAAASSSDPASSSAAA--SSSASTENAASSSSAISSSSSMVSAPLSSTLTTSTAS 344

Query: 879 SPKLRTAQISFETALELIVELANSRSAILSSFS 977
           S  + +  ++        V  A + S++ +S S
Sbjct: 345 SRSVTSNSVNSVKFANTTVFSAQTTSSVSASLS 377

>Q02496:MUC1_MOUSE Mucin-1 precursor - Mus musculus (Mouse)|
          Length = 630

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
 Frame = +3

Query: 477 MDSLSSALRQGWLDLASARHSMGASRVSSTLFDHKEQSAATTLQVVYPADLPPSESNP-H 653
           +DS SS +     D +S   S+     SS +      S AT+        L  S S+P H
Sbjct: 204 VDSTSSPVAHD--DTSSPATSLSEDSASSPVAHGGTSSPATS-------PLRDSTSSPVH 254

Query: 654 FSLSKWCLKEESNSSDIVSAQD----SVTTKLRYRGSAATPDSSNESDATTAKSSTGVDA 821
            S S   ++    +SD+ S  D    SVTT     GSA +PD S  S  TT  SS  V A
Sbjct: 255 SSAS---IQNIKTTSDLASTPDHNGTSVTTTSSALGSATSPDHSGTS--TTTNSSESVLA 309

Query: 822 NSQV 833
            + V
Sbjct: 310 TTPV 313

>Q6DIS1:MIRO2_XENTR Mitochondrial Rho GTPase 2 - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 616

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 989  WSMICYLSLRFCTLAHHLSYLGYQQLCNQQ 1078
            W+++ YL +  C    HL YLGY  LC Q+
Sbjct: 366  WTLVAYLDVHRCL--EHLGYLGYPILCEQE 393

>Q4P782:BST1_USTMA GPI inositol-deacylase - Ustilago maydis (Smut fungus)|
          Length = 1520

 Score = 32.7 bits (73), Expect = 3.3
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +3

Query: 435  ILRFMDSADGYLLLMDSLSSALRQGWLDLASARHSMGASRVSSTLFDHK 581
            I  ++D  D Y    ++ S+    G+L L  A+  +GASR+SS  +D +
Sbjct: 1238 IADYLDVLDRYQRARNATSALFSSGYLKLTRAKIELGASRLSSNSYDSR 1286

>Q5A1Z5:ATG13_CANAL Autophagy-related protein 13 - Candida albicans (Yeast)|
          Length = 761

 Score = 32.3 bits (72), Expect = 4.3
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
 Frame = +3

Query: 663  SKWCLKE-ESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANSQVQK 839
            S++CL E E   S     +D   TK +   S+ +P SS  S   T+ S        ++Q 
Sbjct: 262  SEFCLHENEELLSSHFHKRDEEETKKKV-SSSVSPLSSGTSLKETSTSPRKSQPPIRIQP 320

Query: 840  ARSKALSVFGALVSPKLR---TAQISFE-----TALELIVELANSRSAILSSFSQINRGA 995
             +  ++S    + SP +    TA I  +     ++LE  V + +++S   +S +   R A
Sbjct: 321  FKVGSMSTSPPVQSPSISQPGTAPIQNQPSVPSSSLERRVSITSNKSTSNASLAAFLRNA 380

Query: 996  *FAT*V*GSVPLHTIYPIWGTS---NYAISSGCRQNIIIQSE 1112
              +T    ++P+    PI GTS   +++ S+G   +I +  +
Sbjct: 381  RSSTPSANNIPIINANPISGTSVPRSFSSSTGHEDSIFVNPD 422

>P32583:SRP40_YEAST Suppressor protein SRP40 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 406

 Score = 31.6 bits (70), Expect = 7.4
 Identities = 18/64 (28%), Positives = 36/64 (56%)
 Frame = +3

Query: 636 SESNPHFSLSKWCLKEESNSSDIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGV 815
           S+S+   S S     E  + SD  S+  S ++       +++ DSS++SD++++ SS+  
Sbjct: 173 SDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSSDSSSDSDSSSSSSSSSS 232

Query: 816 DANS 827
           D++S
Sbjct: 233 DSDS 236

>Q8JZN7:MIRO2_MOUSE Mitochondrial Rho GTPase 2 - Mus musculus (Mouse)|
          Length = 620

 Score = 31.6 bits (70), Expect = 7.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 989  WSMICYLSLRFCTLAHHLSYLGYQQLCNQ 1075
            W+++ YL ++ C    HL YLGY  LC Q
Sbjct: 365  WTLMTYLDVQQCLA--HLGYLGYPTLCEQ 391

>Q8L7U5:BSL1_ARATH Serine/threonine-protein phosphatase BSL1 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 881

 Score = 31.6 bits (70), Expect = 7.4
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
 Frame = +3

Query: 516 DLASARHSMGASRVSSTLFDHKEQSAATTLQVVYPADLPPSESNPHFSLSKWCLKEESNS 695
           D   A +S   S +SS L        ++T +  Y A  PPS S P FS+S+    +E++ 
Sbjct: 353 DFLVAENSTFQSDISSPLLASDRTQQSSTPRFSYAAR-PPSGSEPSFSMSEGLSLDENSL 411

Query: 696 SDI--VSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGVDANS 827
             +   SA ++      +R +     + +E  +T+  SS  V++ +
Sbjct: 412 EKLTEASAAEAEVASSVWRAAQLGAGTLDEEPSTSDASSPIVESTT 457

>Q58032:VATD_METJA V-type ATP synthase subunit D - Methanococcus jannaschii|
          Length = 216

 Score = 31.2 bits (69), Expect = 9.6
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
 Frame = +3

Query: 699 DIVSAQDSVTTKLRYRGSAATPDSSNESDATTAKSSTGV-----DANSQVQKARSKALSV 863
           D++ AQ  + T      + A  +   E D  T K+  GV     +  +  +K   +  S 
Sbjct: 63  DLIMAQTVMGTLAVKEAALAAKNDKLEVDMDT-KNIMGVTVPTFEIYNVRRKVGERGYSP 121

Query: 864 FGALVSPKLRTAQISFETALELIVELANSRSAI 962
           +G  VS KL  A   FE ALELI ELA   ++I
Sbjct: 122 YG--VSSKLDEAAKKFEEALELITELAEIETSI 152


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 175,090,660
Number of extensions: 3272167
Number of successful extensions: 9054
Number of sequences better than 10.0: 18
Number of HSP's gapped: 9048
Number of HSP's successfully gapped: 18
Length of query: 424
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 308
Effective length of database: 68,868,219
Effective search space: 21211411452
Effective search space used: 21211411452
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)