ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49d15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT832592.1| Oryza sativa (indica cultivar-group) cDNA clone:... 218 4e-53
2ref|NM_001059812.1| Oryza sativa (japonica cultivar-group) Os04g... 218 4e-53
3dbj|AK069997.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 4e-53
4gb|AY108451.1| Zea mays PCO137050 mRNA sequence 184 5e-43
5emb|CR855236.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 117 1e-22
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-22
7emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4,... 117 1e-22
8gb|DQ299898.1| Monascus pilosus clone BAC mps07 MRT non-LTR retr... 50 0.020
9gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete... 48 0.078
10ref|XM_529953.2| PREDICTED: Pan troglodytes hypothetical LOC4554... 46 0.31
11ref|XM_001056108.1| PREDICTED: Rattus norvegicus similar to ring... 46 0.31
12ref|XM_225701.4| PREDICTED: Rattus norvegicus similar to ring fi... 46 0.31
13ref|XM_001090387.1| PREDICTED: Macaca mulatta similar to ring fi... 46 0.31
14ref|NM_152470.2| Homo sapiens ring finger protein 165 (RNF165), ... 46 0.31
15ref|XM_617227.2| PREDICTED: Bos taurus similar to ring finger pr... 46 0.31
16gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome... 46 0.31
17gb|BC012190.1| Homo sapiens ring finger protein 165, mRNA (cDNA ... 46 0.31
18gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosom... 46 0.31
19dbj|AK127467.1| Homo sapiens cDNA FLJ45559 fis, clone BRTHA30032... 46 0.31
20dbj|AK122819.1| Homo sapiens cDNA FLJ16418 fis, clone BRACE3001948 46 0.31
21emb|AL929603.2|TBBCHR1A1 Trypanosoma brucei chromosome 1, comple... 44 1.2
22gb|DQ440534.1| Aedes aegypti male specific 1 protein (DSXM1) mRN... 44 1.2
23gb|DQ440533.1| Aedes aegypti female specific 2 protein (DSXF2) m... 44 1.2
24gb|DQ440532.1| Aedes aegypti female specific 1 protein (DSXF1) m... 44 1.2
25gb|AC079606.6| Trypanosoma brucei chromosome 2 clone RPCI93-3B10... 44 1.2
26gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho... 44 1.2
27gb|AC018931.9| Homo sapiens chromosome 18, clone RP11-418K9, com... 44 1.2
28emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chr... 44 1.2
29ref|NM_001068958.1| Oryza sativa (japonica cultivar-group) Os08g... 42 4.8
30ref|NM_001067780.1| Oryza sativa (japonica cultivar-group) Os08g... 42 4.8
31ref|NM_001059202.1| Oryza sativa (japonica cultivar-group) Os04g... 42 4.8
32emb|CR925760.12| Zebrafish DNA sequence from clone DKEYP-89A8 in... 42 4.8
33gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, comp... 42 4.8
34ref|XM_867319.1| PREDICTED: Bos taurus similar to Zinc finger pr... 42 4.8
35gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) ge... 42 4.8
36gb|AY344484.1| Oryza sativa (japonica cultivar-group) heat shock... 42 4.8
37gb|AC144826.2| Danio rerio clone CH211-20C7, complete sequence 42 4.8
38gb|AC125624.6| Homo sapiens 3 BAC RP11-42O1 (Roswell Park Cancer... 42 4.8
39gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, comp... 42 4.8
40dbj|AB126089.1| Oryza sativa (japonica cultivar-group) OsZIP4 mR... 42 4.8
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
42dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
43emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chro... 42 4.8
44emb|AL359844.15| Human DNA sequence from clone RP11-314J18 on ch... 42 4.8
45gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T... 42 4.8
46emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in... 42 4.8
47dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
48dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
49dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
50dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
51dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.8
52dbj|AK105258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.8
53emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in ... 42 4.8
54emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 i... 42 4.8
55dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 42 4.8
56gb|AY900582.1| Monascus pilosus non-LTR retrotransposon MRT1, co... 42 4.8
57gb|DQ299900.1| Monascus pilosus clone BAC mps13 MRT non-LTR retr... 42 4.8
58gb|DQ299899.1| Monascus pilosus clone BAC mps11 MRT non-LTR retr... 42 4.8
59gb|DQ299897.1| Monascus pilosus clone BAC mps02 MRT non-LTR retr... 42 4.8
60emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in l... 42 4.8
61emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 42 4.8 
>emb|CT832592.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122G06, full
           insert sequence
          Length = 1143
 Score =  218 bits (110), Expect = 4e-53
 Identities = 233/274 (85%)
 Strand = Plus / Plus

                                                                       
Query: 423 gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
           |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 237 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 296

                                                                       
Query: 483 tcgctctcctccgctcttcgccagggttggcttgatttggcaagtgcgcgtcactcgatg 542
           || || ||||||| ||| |||| ||| ||||||||| |||||||||| ||||||||||||
Sbjct: 297 tcactgtcctccgttctccgcccggggtggcttgatctggcaagtgcccgtcactcgatg 356

                                                                       
Query: 543 ggcgcatcacgtgtttcaagtacactgtttgatcataaagagcaatctgcagccactacg 602
           ||  ||||||||||||| |||||||| || ||||| ||||||||||||||||| |  | |
Sbjct: 357 ggtacatcacgtgtttcgagtacactcttcgatcacaaagagcaatctgcagctagcaag 416

                                                                       
Query: 603 ctgcaagtagtttatcctgcagacttgccaccatcagaatcaaacccgcatttttctcta 662
           |||||||| ||| || ||||||||| ||   |||||||  ||||||| ||||||   || 
Sbjct: 417 ctgcaagtggttgattctgcagactcgcagtcatcagagccaaacccacattttatcctg 476

                                             
Query: 663 tcaaagtggtgtttgaaagaagaatcaaactcca 696
           ||||||||||| ||| ||||| |||| |||||||
Sbjct: 477 tcaaagtggtgcttgcaagaaaaatccaactcca 510



 Score =  149 bits (75), Expect = 3e-32
 Identities = 177/211 (83%)
 Strand = Plus / Plus

                                                                       
Query: 775 atgaatcagatgcaactacggcaaagtcttctactggtgttgacgctaacagtcaggttc 834
           |||| |||||||||||| ||||| ||||| ||||| |||| ||| |||  || || ||||
Sbjct: 592 atgattcagatgcaactccggcagagtctgctactagtgtggacactagtagccatgttc 651

                                                                       
Query: 835 aaaaggcgagatcaaaagcattatcagtctttggagcattggtgtctccaaaattacgaa 894
           | ||||| |||||||||||| |||||  |||||||||| |||| ||||||||| ||||| 
Sbjct: 652 agaaggcaagatcaaaagcactatcaacctttggagcactggtatctccaaaactacgat 711

                                                                       
Query: 895 cagcccaaatttcctttgaaacagcacttgaactaatcgtggagttagcaaattcaagat 954
           | ||||| || ||||||||||||||||||||| |||| ||||| ||||||||||| || |
Sbjct: 712 cggcccagatgtcctttgaaacagcacttgaattaattgtggaattagcaaattctaggt 771

                                          
Query: 955 cagccatcctctctagtttctcccagataaa 985
           ||| |||  | ||||||||||| || |||||
Sbjct: 772 cagacatgttatctagtttctctcaaataaa 802
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>ref|NM_001059812.1| Oryza sativa (japonica cultivar-group) Os04g0509200 (Os04g0509200)
           mRNA, complete cds
          Length = 1138

 Score =  218 bits (110), Expect = 4e-53
 Identities = 233/274 (85%)
 Strand = Plus / Plus

                                                                       
Query: 423 gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
           |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 229 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 288

                                                                       
Query: 483 tcgctctcctccgctcttcgccagggttggcttgatttggcaagtgcgcgtcactcgatg 542
           || || ||||||| ||| |||| ||| ||||||||| |||||||||| ||||||||||||
Sbjct: 289 tcactgtcctccgttctccgcccggggtggcttgatctggcaagtgcccgtcactcgatg 348

                                                                       
Query: 543 ggcgcatcacgtgtttcaagtacactgtttgatcataaagagcaatctgcagccactacg 602
           ||  ||||||||||||| |||||||| || ||||| ||||||||||||||||| |  | |
Sbjct: 349 ggtacatcacgtgtttcgagtacactcttcgatcacaaagagcaatctgcagctagcaag 408

                                                                       
Query: 603 ctgcaagtagtttatcctgcagacttgccaccatcagaatcaaacccgcatttttctcta 662
           |||||||| ||| || ||||||||| ||   |||||||  ||||||| ||||||   || 
Sbjct: 409 ctgcaagtggttgattctgcagactcgcagtcatcagagccaaacccacattttatcctg 468

                                             
Query: 663 tcaaagtggtgtttgaaagaagaatcaaactcca 696
           ||||||||||| ||| ||||| |||| |||||||
Sbjct: 469 tcaaagtggtgcttgcaagaaaaatccaactcca 502



 Score =  167 bits (84), Expect = 1e-37
 Identities = 213/256 (83%)
 Strand = Plus / Plus

                                                                       
Query: 730 caaaactaaggtacagaggatcagctgctaccccagatagtagcaatgaatcagatgcaa 789
           ||||| |||||||| |||| ||||| || || |||||| | ||| |||| ||||||||||
Sbjct: 536 caaaattaaggtaccgagggtcagcagcaacgccagatggcagccatgattcagatgcaa 595

                                                                       
Query: 790 ctacggcaaagtcttctactggtgttgacgctaacagtcaggttcaaaaggcgagatcaa 849
           || ||||| ||||| ||||| |||| ||| |||  || || ||||| ||||| |||||||
Sbjct: 596 ctccggcagagtctgctactagtgtggacactagtagccatgttcagaaggcaagatcaa 655

                                                                       
Query: 850 aagcattatcagtctttggagcattggtgtctccaaaattacgaacagcccaaatttcct 909
           ||||| |||||  |||||||||| |||| ||||||||| ||||| | ||||| || ||||
Sbjct: 656 aagcactatcaacctttggagcactggtatctccaaaactacgatcggcccagatgtcct 715

                                                                       
Query: 910 ttgaaacagcacttgaactaatcgtggagttagcaaattcaagatcagccatcctctcta 969
           ||||||||||||||||| |||| ||||| ||||||||||| || |||| |||  | ||||
Sbjct: 716 ttgaaacagcacttgaattaattgtggaattagcaaattctaggtcagacatgttatcta 775

                           
Query: 970 gtttctcccagataaa 985
           ||||||| || |||||
Sbjct: 776 gtttctctcaaataaa 791
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>dbj|AK069997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G06, full
           insert sequence
          Length = 1141

 Score =  218 bits (110), Expect = 4e-53
 Identities = 233/274 (85%)
 Strand = Plus / Plus

                                                                       
Query: 423 gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
           |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 230 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 289

                                                                       
Query: 483 tcgctctcctccgctcttcgccagggttggcttgatttggcaagtgcgcgtcactcgatg 542
           || || ||||||| ||| |||| ||| ||||||||| |||||||||| ||||||||||||
Sbjct: 290 tcactgtcctccgttctccgcccggggtggcttgatctggcaagtgcccgtcactcgatg 349

                                                                       
Query: 543 ggcgcatcacgtgtttcaagtacactgtttgatcataaagagcaatctgcagccactacg 602
           ||  ||||||||||||| |||||||| || ||||| ||||||||||||||||| |  | |
Sbjct: 350 ggtacatcacgtgtttcgagtacactcttcgatcacaaagagcaatctgcagctagcaag 409

                                                                       
Query: 603 ctgcaagtagtttatcctgcagacttgccaccatcagaatcaaacccgcatttttctcta 662
           |||||||| ||| || ||||||||| ||   |||||||  ||||||| ||||||   || 
Sbjct: 410 ctgcaagtggttgattctgcagactcgcagtcatcagagccaaacccacattttatcctg 469

                                             
Query: 663 tcaaagtggtgtttgaaagaagaatcaaactcca 696
           ||||||||||| ||| ||||| |||| |||||||
Sbjct: 470 tcaaagtggtgcttgcaagaaaaatccaactcca 503



 Score =  167 bits (84), Expect = 1e-37
 Identities = 213/256 (83%)
 Strand = Plus / Plus

                                                                       
Query: 730 caaaactaaggtacagaggatcagctgctaccccagatagtagcaatgaatcagatgcaa 789
           ||||| |||||||| |||| ||||| || || |||||| | ||| |||| ||||||||||
Sbjct: 537 caaaattaaggtaccgagggtcagcagcaacgccagatggcagccatgattcagatgcaa 596

                                                                       
Query: 790 ctacggcaaagtcttctactggtgttgacgctaacagtcaggttcaaaaggcgagatcaa 849
           || ||||| ||||| ||||| |||| ||| |||  || || ||||| ||||| |||||||
Sbjct: 597 ctccggcagagtctgctactagtgtggacactagtagccatgttcagaaggcaagatcaa 656

                                                                       
Query: 850 aagcattatcagtctttggagcattggtgtctccaaaattacgaacagcccaaatttcct 909
           ||||| |||||  |||||||||| |||| ||||||||| ||||| | ||||| || ||||
Sbjct: 657 aagcactatcaacctttggagcactggtatctccaaaactacgatcggcccagatgtcct 716

                                                                       
Query: 910 ttgaaacagcacttgaactaatcgtggagttagcaaattcaagatcagccatcctctcta 969
           ||||||||||||||||| |||| ||||| ||||||||||| || |||| |||  | ||||
Sbjct: 717 ttgaaacagcacttgaattaattgtggaattagcaaattctaggtcagacatgttatcta 776

                           
Query: 970 gtttctcccagataaa 985
           ||||||| || |||||
Sbjct: 777 gtttctctcaaataaa 792
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>gb|AY108451.1| Zea mays PCO137050 mRNA sequence
          Length = 1070

 Score =  184 bits (93), Expect = 5e-43
 Identities = 222/265 (83%)
 Strand = Plus / Plus

                                                                       
Query: 423 gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
           |||||||| ||||||||||||||||||||||||| |||| ||||||| ||||| ||||| 
Sbjct: 334 gacgacgaggagatcctgcgattcatggactcggtggacagctacctgctcctcatggac 393

                                                                       
Query: 483 tcgctctcctccgctcttcgccagggttggcttgatttggcaagtgcgcgtcactcgatg 542
           || || |||||||||||||| ||||| ||||||||  |||||||||| || || || |||
Sbjct: 394 tccctatcctccgctcttcgtcagggctggcttgacctggcaagtgctcgccattctatg 453

                                                                       
Query: 543 ggcgcatcacgtgtttcaagtacactgtttgatcataaagagcaatctgcagccactacg 602
           ||| ||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||| |
Sbjct: 454 ggcacatcacgcgtttcgagtacactgtttgatcacaaggagcagtctgctgccactaag 513

                                                                       
Query: 603 ctgcaagtagtttatcctgcagacttgccaccatcagaatcaaacccgcatttttctcta 662
           || ||||| ||| ||| ||  | | ||  | ||||||| ||||  || || ||| |||||
Sbjct: 514 cttcaagttgttgatcatgatggcctgaaatcatcagagtcaataccacactttgctcta 573

                                    
Query: 663 tcaaagtggtgtttgaaagaagaat 687
           |||||||||| |||| |||||||||
Sbjct: 574 tcaaagtggtctttgcaagaagaat 598



 Score =  101 bits (51), Expect = 6e-18
 Identities = 106/123 (86%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                       
Query: 831 gttcaaaaggcgagatcaaaagcattatcagtctttggagc-attggtgtctccaaaatt 889
           |||||||  ||||||||||||||||||||||||||||| |  |||||| || |||||| |
Sbjct: 742 gttcaaagagcgagatcaaaagcattatcagtctttggggggattggtatccccaaaact 801

                                                                       
Query: 890 acgaacagcccaaatttcctttgaaacagcacttgaactaatcgtggagttagcaaattc 949
           | |||| |||||| |||| |||||||||||||||||  | || |||||| ||||||||||
Sbjct: 802 aagaaccgcccaactttcatttgaaacagcacttgacttgattgtggagctagcaaattc 861

              
Query: 950 aag 952
           |||
Sbjct: 862 aag 864
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>emb|CR855236.1| Oryza sativa genomic DNA, chromosome 4, BAC clone:
            OSIGBa0157K09-H0214G12, complete sequence
          Length = 163903

 Score =  117 bits (59), Expect = 1e-22
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                        
Query: 505  agggttggcttgatttggcaagtgcgcgtcactcgatgggcgcatcacgtgtttcaagta 564
            |||| ||||||||| |||||||||| ||||||||||||||  ||||||||||||| ||||
Sbjct: 5774 aggggtggcttgatctggcaagtgcccgtcactcgatgggtacatcacgtgtttcgagta 5715

                                                                        
Query: 565  cactgtttgatcataaagagcaatctgcagccactacgctgcaagtagtttatcctgcag 624
            |||| || ||||| ||||||||||||||||| |  | ||||||||| ||| || ||||||
Sbjct: 5714 cactcttcgatcacaaagagcaatctgcagctagcaagctgcaagtggttgattctgcag 5655

               
Query: 625  act 627
            |||
Sbjct: 5654 act 5652



 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                        
Query: 423  gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
            |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 6700 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 6641

                                  
Query: 483  tcgctctcctccgctcttcgcc 504
            || || ||||||| ||| ||||
Sbjct: 6640 tcactgtcctccgttctccgcc 6619



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                        
Query: 829  aggttcaaaaggcgagatcaaaagcattatcagtctttggagcattggtgtctccaaaat 888
            ||||||| ||||| |||||||||||| |||||  |||||||||| |||| ||||||||| 
Sbjct: 4680 aggttcagaaggcaagatcaaaagcactatcaacctttggagcactggtatctccaaaac 4621

                                          
Query: 889  tacgaacagcccaaatttcctttgaaacag 918
            ||||| | ||||| || |||||||||||||
Sbjct: 4620 tacgatcggcccagatgtcctttgaaacag 4591



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 916  cagcacttgaactaatcgtggagttagcaaattcaagatcagccatcctctctagtttct 975
            ||||||||||| |||| ||||| ||||||||||| || |||| |||  | ||||||||||
Sbjct: 4506 cagcacttgaattaattgtggaattagcaaattctaggtcagacatgttatctagtttct 4447

                      
Query: 976  cccagataaa 985
            | || |||||
Sbjct: 4446 ctcaaataaa 4437
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  117 bits (59), Expect = 1e-22
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                            
Query: 505      agggttggcttgatttggcaagtgcgcgtcactcgatgggcgcatcacgtgtttcaagta 564
                |||| ||||||||| |||||||||| ||||||||||||||  ||||||||||||| ||||
Sbjct: 25443788 aggggtggcttgatctggcaagtgcccgtcactcgatgggtacatcacgtgtttcgagta 25443729

                                                                            
Query: 565      cactgtttgatcataaagagcaatctgcagccactacgctgcaagtagtttatcctgcag 624
                |||| || ||||| ||||||||||||||||| |  | ||||||||| ||| || ||||||
Sbjct: 25443728 cactcttcgatcacaaagagcaatctgcagctagcaagctgcaagtggttgattctgcag 25443669

                   
Query: 625      act 627
                |||
Sbjct: 25443668 act 25443666



 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 423      gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
                |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 25444714 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 25444655

                                      
Query: 483      tcgctctcctccgctcttcgcc 504
                || || ||||||| ||| ||||
Sbjct: 25444654 tcactgtcctccgttctccgcc 25444633



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                            
Query: 829      aggttcaaaaggcgagatcaaaagcattatcagtctttggagcattggtgtctccaaaat 888
                ||||||| ||||| |||||||||||| |||||  |||||||||| |||| ||||||||| 
Sbjct: 25442694 aggttcagaaggcaagatcaaaagcactatcaacctttggagcactggtatctccaaaac 25442635

                                              
Query: 889      tacgaacagcccaaatttcctttgaaacag 918
                ||||| | ||||| || |||||||||||||
Sbjct: 25442634 tacgatcggcccagatgtcctttgaaacag 25442605



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 916      cagcacttgaactaatcgtggagttagcaaattcaagatcagccatcctctctagtttct 975
                ||||||||||| |||| ||||| ||||||||||| || |||| |||  | ||||||||||
Sbjct: 25442520 cagcacttgaattaattgtggaattagcaaattctaggtcagacatgttatctagtttct 25442461

                          
Query: 976      cccagataaa 985
                | || |||||
Sbjct: 25442460 ctcaaataaa 25442451



 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 391      gtaatgcggcggcggcggcgg 411
                |||||||||||||||||||||
Sbjct: 19623912 gtaatgcggcggcggcggcgg 19623892
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>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13,
             complete sequence
          Length = 103039

 Score =  117 bits (59), Expect = 1e-22
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                         
Query: 505   agggttggcttgatttggcaagtgcgcgtcactcgatgggcgcatcacgtgtttcaagta 564
             |||| ||||||||| |||||||||| ||||||||||||||  ||||||||||||| ||||
Sbjct: 21281 aggggtggcttgatctggcaagtgcccgtcactcgatgggtacatcacgtgtttcgagta 21222

                                                                         
Query: 565   cactgtttgatcataaagagcaatctgcagccactacgctgcaagtagtttatcctgcag 624
             |||| || ||||| ||||||||||||||||| |  | ||||||||| ||| || ||||||
Sbjct: 21221 cactcttcgatcacaaagagcaatctgcagctagcaagctgcaagtggttgattctgcag 21162

                
Query: 625   act 627
             |||
Sbjct: 21161 act 21159



 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 423   gacgacgaagagatcctgcgattcatggactcggcggacggctacctcctcctgatggat 482
             |||||||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||||
Sbjct: 22207 gacgacgacgagatcctgcggttcatggactctgtggacggctacctcctcctcatggat 22148

                                   
Query: 483   tcgctctcctccgctcttcgcc 504
             || || ||||||| ||| ||||
Sbjct: 22147 tcactgtcctccgttctccgcc 22126



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 829   aggttcaaaaggcgagatcaaaagcattatcagtctttggagcattggtgtctccaaaat 888
             ||||||| ||||| |||||||||||| |||||  |||||||||| |||| ||||||||| 
Sbjct: 20187 aggttcagaaggcaagatcaaaagcactatcaacctttggagcactggtatctccaaaac 20128

                                           
Query: 889   tacgaacagcccaaatttcctttgaaacag 918
             ||||| | ||||| || |||||||||||||
Sbjct: 20127 tacgatcggcccagatgtcctttgaaacag 20098



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 916   cagcacttgaactaatcgtggagttagcaaattcaagatcagccatcctctctagtttct 975
             ||||||||||| |||| ||||| ||||||||||| || |||| |||  | ||||||||||
Sbjct: 20013 cagcacttgaattaattgtggaattagcaaattctaggtcagacatgttatctagtttct 19954

                       
Query: 976   cccagataaa 985
             | || |||||
Sbjct: 19953 ctcaaataaa 19944
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>gb|DQ299898.1| Monascus pilosus clone BAC mps07 MRT non-LTR retrotransposon
           gag-like protein and reverse transcriptase genes,
           complete cds
          Length = 6100

 Score = 50.1 bits (25), Expect = 0.020
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 290 cagctcctcctcctgaaggattgga 314
           |||||||||||||||||||||||||
Sbjct: 929 cagctcctcctcctgaaggattgga 953
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>gb|AC098732.3| Mus musculus BAC clone RP23-3L20 from 3, complete sequence
          Length = 274210

 Score = 48.1 bits (24), Expect = 0.078
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 1215  gtatggttgaaatagaaacataaa 1238
             ||||||||||||||||||||||||
Sbjct: 52553 gtatggttgaaatagaaacataaa 52530
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>ref|XM_529953.2| PREDICTED: Pan troglodytes hypothetical LOC455400 (LOC455400), mRNA
          Length = 7739

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 800 tcctcgagctgcagcagctcctc 778
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>ref|XM_001056108.1| PREDICTED: Rattus norvegicus similar to ring finger protein 111
           (predicted) (RGD1560744_predicted), mRNA
          Length = 2300

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 749 tcctcgagctgcagcagctcctc 727
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>ref|XM_225701.4| PREDICTED: Rattus norvegicus similar to ring finger protein 111
            (predicted) (RGD1560744_predicted), mRNA
          Length = 2930

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 276  tcctcgagctgcagcagctcctc 298
            |||||||||||||||||||||||
Sbjct: 1379 tcctcgagctgcagcagctcctc 1357
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>ref|XM_001090387.1| PREDICTED: Macaca mulatta similar to ring finger protein 165
            (LOC702104), mRNA
          Length = 1943

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 276  tcctcgagctgcagcagctcctc 298
            |||||||||||||||||||||||
Sbjct: 1472 tcctcgagctgcagcagctcctc 1450
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>ref|NM_152470.2| Homo sapiens ring finger protein 165 (RNF165), mRNA
          Length = 5276

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 791 tcctcgagctgcagcagctcctc 769
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>ref|XM_617227.2| PREDICTED: Bos taurus similar to ring finger protein 165 (LOC537072),
            mRNA
          Length = 1524

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 276  tcctcgagctgcagcagctcctc 298
            |||||||||||||||||||||||
Sbjct: 1415 tcctcgagctgcagcagctcctc 1393
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>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence
          Length = 190937

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 281   gagctgcagcagctcctcctcct 303
             |||||||||||||||||||||||
Sbjct: 22361 gagctgcagcagctcctcctcct 22383
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>gb|BC012190.1| Homo sapiens ring finger protein 165, mRNA (cDNA clone
           IMAGE:4650122), with apparent retained intron
          Length = 2621

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 817 tcctcgagctgcagcagctcctc 795
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>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete
           sequence
          Length = 162693

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 281 gagctgcagcagctcctcctcct 303
           |||||||||||||||||||||||
Sbjct: 12  gagctgcagcagctcctcctcct 34
to top
>dbj|AK127467.1| Homo sapiens cDNA FLJ45559 fis, clone BRTHA3003225
 tpg|BK005135.1| TPA_inf: Homo sapiens putative ubiquitin ligase component (ARKL2)
           mRNA, complete cds
          Length = 4830

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 791 tcctcgagctgcagcagctcctc 769
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>dbj|AK122819.1| Homo sapiens cDNA FLJ16418 fis, clone BRACE3001948
          Length = 4399

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 276 tcctcgagctgcagcagctcctc 298
           |||||||||||||||||||||||
Sbjct: 367 tcctcgagctgcagcagctcctc 345
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>emb|AL929603.2|TBBCHR1A1 Trypanosoma brucei chromosome 1, complete sequence
          Length = 1064672

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1224  aaatagaaacataaataaattt 1245
             ||||||||||||||||||||||
Sbjct: 80643 aaatagaaacataaataaattt 80664
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>gb|DQ440534.1| Aedes aegypti male specific 1 protein (DSXM1) mRNA, complete cds
          Length = 1807

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 327  gcgacggcggcagcagaggtgg 348
            ||||||||||||||||||||||
Sbjct: 1283 gcgacggcggcagcagaggtgg 1262
to top
>gb|DQ440533.1| Aedes aegypti female specific 2 protein (DSXF2) mRNA, complete cds
          Length = 2276

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 327  gcgacggcggcagcagaggtgg 348
            ||||||||||||||||||||||
Sbjct: 1752 gcgacggcggcagcagaggtgg 1731
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>gb|DQ440532.1| Aedes aegypti female specific 1 protein (DSXF1) mRNA, complete cds
          Length = 2737

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 327  gcgacggcggcagcagaggtgg 348
            ||||||||||||||||||||||
Sbjct: 2213 gcgacggcggcagcagaggtgg 2192
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>gb|AC079606.6| Trypanosoma brucei chromosome 2 clone RPCI93-3B10, complete sequence
          Length = 160845

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1224  aaatagaaacataaataaattt 1245
             ||||||||||||||||||||||
Sbjct: 81609 aaatagaaacataaataaattt 81630
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>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216677

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 1129   gaatgtatatttttgtccatttattt 1154
              |||||||||||||| |||||||||||
Sbjct: 209351 gaatgtatatttttctccatttattt 209376
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>gb|AC018931.9| Homo sapiens chromosome 18, clone RP11-418K9, complete sequence
          Length = 185117

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 276   tcctcgagctgcagcagctcct 297
             ||||||||||||||||||||||
Sbjct: 71110 tcctcgagctgcagcagctcct 71089
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>emb|AL355588.8| Human DNA sequence from clone RP11-515J13 on chromosome 9, complete
             sequence
          Length = 123274

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1081  gttgtagacaaaatatcataatacaa 1106
             |||||| |||||||||||||||||||
Sbjct: 17565 gttgtaaacaaaatatcataatacaa 17590
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>ref|NM_001068958.1| Oryza sativa (japonica cultivar-group) Os08g0546800 (Os08g0546800)
           mRNA, complete cds
          Length = 1940

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 112 gggagacgacggccagcggcg 132
           |||||||||||||||||||||
Sbjct: 191 gggagacgacggccagcggcg 211
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>ref|NM_001067780.1| Oryza sativa (japonica cultivar-group) Os08g0207500 (Os08g0207500)
           mRNA, complete cds
          Length = 1722

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 gtaatgcggcggcggcggcgg 411
           |||||||||||||||||||||
Sbjct: 153 gtaatgcggcggcggcggcgg 173
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>ref|NM_001059202.1| Oryza sativa (japonica cultivar-group) Os04g0397500 (Os04g0397500)
           mRNA, complete cds
          Length = 948

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 gtaatgcggcggcggcggcgg 411
           |||||||||||||||||||||
Sbjct: 428 gtaatgcggcggcggcggcgg 448
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>emb|CR925760.12| Zebrafish DNA sequence from clone DKEYP-89A8 in linkage group 10,
              complete sequence
          Length = 122664

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1135   atatttttgtccatttatttgttgt 1159
              |||||||||||||||||||| ||||
Sbjct: 119601 atatttttgtccatttatttattgt 119625
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>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence
          Length = 202156

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1137   atttttgtccatttatttgttgtactttg 1165
              |||||| ||||||| ||||||||||||||
Sbjct: 131287 atttttctccatttgtttgttgtactttg 131259
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>ref|XM_867319.1| PREDICTED: Bos taurus similar to Zinc finger protein 219
           (LOC615493), mRNA
          Length = 2641

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 285 tgcagcagctcctcctcctga 305
           |||||||||||||||||||||
Sbjct: 630 tgcagcagctcctcctcctga 610
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>gb|AY190958.1| Drosophila virilis clone DVIF01_45_J10 (D1457) genomic sequence
          Length = 44255

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 395  tgcggcggcggcggcggaact 415
            |||||||||||||||||||||
Sbjct: 8542 tgcggcggcggcggcggaact 8562
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>gb|AY344484.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF2
           mRNA, complete cds
          Length = 1938

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 112 gggagacgacggccagcggcg 132
           |||||||||||||||||||||
Sbjct: 193 gggagacgacggccagcggcg 213
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>gb|AC144826.2| Danio rerio clone CH211-20C7, complete sequence
          Length = 163056

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1135  atatttttgtccatttatttgttgt 1159
             |||||||||||||||||||| ||||
Sbjct: 29968 atatttttgtccatttatttattgt 29944
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>gb|AC125624.6| Homo sapiens 3 BAC RP11-42O1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177929

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 867   ggagcattggtgtctccaaaa 887
             |||||||||||||||||||||
Sbjct: 41626 ggagcattggtgtctccaaaa 41606
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>gb|AC099753.2| Homo sapiens chromosome 3 clone RP11-466A13, complete sequence
          Length = 171696

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1136  tatttttgtccatttatttgt 1156
             |||||||||||||||||||||
Sbjct: 15112 tatttttgtccatttatttgt 15132
to top
>dbj|AB126089.1| Oryza sativa (japonica cultivar-group) OsZIP4 mRNA for zinc
           transporter, complete cds
          Length = 1191

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 gtaatgcggcggcggcggcgg 411
           |||||||||||||||||||||
Sbjct: 119 gtaatgcggcggcggcggcgg 139
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 391     gtaatgcggcggcggcggcgg 411
               |||||||||||||||||||||
Sbjct: 6261633 gtaatgcggcggcggcggcgg 6261653



 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 112      gggagacgacggccagcggcg 132
                |||||||||||||||||||||
Sbjct: 27379650 gggagacgacggccagcggcg 27379630
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 396      gcggcggcggcggcggaactc 416
                |||||||||||||||||||||
Sbjct: 11151142 gcggcggcggcggcggaactc 11151162
to top
>emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chromosome 6 Contains the
             C6orf58 gene and the 5' end of a novel gene, complete
             sequence
          Length = 114100

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1224  aaatagaaacataaataaattttgg 1248
             ||||||||||||||||||| |||||
Sbjct: 39877 aaatagaaacataaataaaatttgg 39901
to top
>emb|AL359844.15| Human DNA sequence from clone RP11-314J18 on chromosome 10 Contains the
             gene for a novel protein (FLJ25162), the GU2 gene for
             nucleolar protein GU2 (GUB, MGC3199, RH-II/GuB), the DDX21
             gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21
             (GUA, GURDB, RH-II/GU, RH-II/GuA), the gene for a novel
             protein (DKFZP586B0923)(KIAA1279), an endothelial-derived
             gene 1 (EG1)(EG-1, DKFZP434N185) pseudogene, an actin,
             beta (ACTB) pseudogene and three CpG islands, complete
             sequence
          Length = 171364

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1130  aatgtatatttttgtccatttattt 1154
             ||||||||||||||| |||||||||
Sbjct: 87480 aatgtatatttttgtacatttattt 87504
to top
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
            genes, complete cds; and unknown gene
          Length = 43606

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 395  tgcggcggcggcggcggaactcgag 419
            |||||||||||||||||| ||||||
Sbjct: 1300 tgcggcggcggcggcggagctcgag 1324
to top
>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22,
              complete sequence
          Length = 143845

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1130   aatgtatatttttgtccattt 1150
              |||||||||||||||||||||
Sbjct: 133710 aatgtatatttttgtccattt 133730
to top
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0004P20
          Length = 160410

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    gcggcggcggcggcggaactc 416
              |||||||||||||||||||||
Sbjct: 109949 gcggcggcggcggcggaactc 109969
to top
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1734_E04
          Length = 101439

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 391   gtaatgcggcggcggcggcgg 411
             |||||||||||||||||||||
Sbjct: 47770 gtaatgcggcggcggcggcgg 47790
to top
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1119_C05
          Length = 126112

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    gtaatgcggcggcggcggcgg 411
              |||||||||||||||||||||
Sbjct: 125026 gtaatgcggcggcggcggcgg 125046
to top
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   gggagacgacggccagcggcg 132
             |||||||||||||||||||||
Sbjct: 81177 gggagacgacggccagcggcg 81157
to top
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0544G09
          Length = 137481

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  gggagacgacggccagcggcg 132
            |||||||||||||||||||||
Sbjct: 6445 gggagacgacggccagcggcg 6425
to top
>dbj|AK105258.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G07, full
           insert sequence
          Length = 1722

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 gtaatgcggcggcggcggcgg 411
           |||||||||||||||||||||
Sbjct: 153 gtaatgcggcggcggcggcgg 173
to top
>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22,
             complete sequence
          Length = 219929

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1130  aatgtatatttttgtccattt 1150
             |||||||||||||||||||||
Sbjct: 36092 aatgtatatttttgtccattt 36112
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>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12,
              complete sequence
          Length = 171213

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1130   aatgtatatttttgtccattt 1150
              |||||||||||||||||||||
Sbjct: 134215 aatgtatatttttgtccattt 134235
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>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete
             sequences
          Length = 206624

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1230  aaacataaataaattttggtc 1250
             |||||||||||||||||||||
Sbjct: 49798 aaacataaataaattttggtc 49818
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>gb|AY900582.1| Monascus pilosus non-LTR retrotransposon MRT1, complete sequence; DNA
            primase, matrix protein, and exonuclease genes, complete
            cds; non-LTR retrotransposon MRT2, complete sequence; and
            unknown genes
          Length = 24200

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 290  cagctcctcctcctgaaggattgga 314
            ||||||||||||||||| |||||||
Sbjct: 5802 cagctcctcctcctgaatgattgga 5778
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>gb|DQ299900.1| Monascus pilosus clone BAC mps13 MRT non-LTR retrotransposon
           gag-like protein and reverse transcriptase genes,
           complete cds
          Length = 5900

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 290 cagctcctcctcctgaaggattgga 314
           ||||||||||||||||| |||||||
Sbjct: 739 cagctcctcctcctgaatgattgga 763
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>gb|DQ299899.1| Monascus pilosus clone BAC mps11 MRT non-LTR retrotransposon
           gag-like protein and reverse transcriptase genes,
           complete cds
          Length = 6000

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 290 cagctcctcctcctgaaggattgga 314
           ||||||||||||||||| |||||||
Sbjct: 91  cagctcctcctcctgaatgattgga 67



 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 290 cagctcctcctcctgaaggattgga 314
           ||||||||||||||||| |||||||
Sbjct: 835 cagctcctcctcctgaatgattgga 859
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>gb|DQ299897.1| Monascus pilosus clone BAC mps02 MRT non-LTR retrotransposon
           gag-like protein and reverse transcriptase genes,
           complete cds
          Length = 5600

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 290 cagctcctcctcctgaaggattgga 314
           ||||||||||||||||| |||||||
Sbjct: 363 cagctcctcctcctgaatgattgga 387
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>emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in linkage group 14, complete
              sequence
          Length = 197465

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1134   tatatttttgtccatttattt 1154
              |||||||||||||||||||||
Sbjct: 180470 tatatttttgtccatttattt 180450
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>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
             complete sequence
          Length = 166410

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 391   gtaatgcggcggcggcggcgg 411
             |||||||||||||||||||||
Sbjct: 74638 gtaatgcggcggcggcggcgg 74618


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 204,899,464
Number of extensions: 12337543
Number of successful extensions: 475341
Number of sequences better than 10.0: 61
Number of HSP's gapped: 475340
Number of HSP's successfully gapped: 78
Length of query: 1274
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1251
Effective length of database: 18,503,978,556
Effective search space: 23148477173556
Effective search space used: 23148477173556
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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