ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf48n08 |
|---|---|
| Clone Library Name | barley_pub |
>P27808:MGAT1_MOUSE Alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Mus musculus (Mouse) Length = 447 Score = 211 bits (538), Expect(3) = 3e-62 Identities = 106/225 (47%), Positives = 142/225 (63%), Gaps = 7/225 (3%) Frame = +1 Query: 601 HYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQK 780 HY+WAL ++F K F +++EDD+E+APDFF+YF+A LL TD S+ VS+WNDNG++ Sbjct: 190 HYRWALGQIFNKFKFPAAVVVEDDLEVAPDFFEYFQATYPLLRTDPSLWCVSAWNDNGKE 249 Query: 781 QFVYD--PKALYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRLKEVRRDRQFIRPE 954 Q V P+ LYR+DFFPGLGW+L W EL PKWPKA+WDDW+R E R+ R IRPE Sbjct: 250 QMVDSSKPELLYRTDFFPGLGWLLLADLWAELEPKWPKAFWDDWMRRPEQRKGRACIRPE 309 Query: 955 VCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWTSEDLSYLTED----NFLIK-FGKDV 1119 + RT FG G S GQFFDQ+LK IKLN + +T DLSYL ++ +FL + +G Sbjct: 310 ISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSYLQQEAYDRDFLAQVYGAPQ 369 Query: 1120 ASATPVHGFDELLKAHNLDVERIQYDDQGDFERVARQFGVFEEWK 1254 V D+ L R+QY + F+ A+ GV ++ K Sbjct: 370 LQVEKVRTNDQ----KELGEVRVQYTSRDSFKAFAKALGVMDDLK 410 Score = 36.2 bits (82), Expect(3) = 3e-62 Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Frame = +3 Query: 357 VVIMACNRPDYLQRTVESILKYQKAVASKFPLFISQDGTNGDVKNKALSY----TQIRY- 521 ++++AC+R ++R ++ +L Y+ + A +FP+ +SQD + + SY T IR Sbjct: 110 ILVIACDRST-VRRCLDKLLHYRPS-AERFPIIVSQDCGHEETAQVIASYGTAVTHIRQP 167 Query: 522 -MQHVDLEPVHTERPGEHIAYYKIA 593 + ++ ++P H + G YYKIA Sbjct: 168 DLSNIAVQPDHRKFQG----YYKIA 188 Score = 34.3 bits (77), Expect(3) = 3e-62 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +3 Query: 1353 KDGVPRAAYKGVVVFRYKSSRRRIYLVGPDS 1445 K GVPRA Y+G+V F+++ RR++L P + Sbjct: 410 KSGVPRAGYRGIVTFQFRG--RRVHLAPPQT 438
>Q09325:MGAT1_RAT Alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Rattus norvegicus (Rat) Length = 447 Score = 209 bits (532), Expect(2) = 3e-57 Identities = 104/223 (46%), Positives = 141/223 (63%), Gaps = 5/223 (2%) Frame = +1 Query: 601 HYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQK 780 HY+WAL ++F K F +++EDD+E+APDFF+YF+A LL D S+ VS+WNDNG++ Sbjct: 190 HYRWALGQIFNKFKFPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKE 249 Query: 781 QFVYD--PKALYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRLKEVRRDRQFIRPE 954 Q V P+ LYR+DFFPGLGW+L W EL PKWPKA+WDDW+R E R+ R IRPE Sbjct: 250 QMVDSSKPELLYRTDFFPGLGWLLLADLWAELEPKWPKAFWDDWMRRPEQRKGRACIRPE 309 Query: 955 VCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWTSEDLSYLTEDNFLIKFGKDVASATP 1134 + RT FG G S GQFFDQ+LK IKLN + +T DLSYL + + F V A Sbjct: 310 ISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSYLQREAYDRDFLAQVYGAPQ 369 Query: 1135 VHGFDELLKAHN---LDVERIQYDDQGDFERVARQFGVFEEWK 1254 + E ++ ++ L R+QY + F+ A+ GV ++ K Sbjct: 370 LQ--VEKVRTNDRKELGEVRVQYTSRDSFKAFAKALGVMDDLK 410 Score = 35.0 bits (79), Expect(2) = 3e-57 Identities = 14/31 (45%), Positives = 23/31 (74%) Frame = +3 Query: 1353 KDGVPRAAYKGVVVFRYKSSRRRIYLVGPDS 1445 K GVPRA Y+G+V F+++ RR++L P++ Sbjct: 410 KSGVPRAGYRGIVTFQFRG--RRVHLAPPET 438
>P27115:MGAT1_RABIT Alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Oryctolagus cuniculus (Rabbit) Length = 447 Score = 206 bits (525), Expect(2) = 8e-56 Identities = 102/225 (45%), Positives = 140/225 (62%), Gaps = 7/225 (3%) Frame = +1 Query: 601 HYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQK 780 HY+WAL ++F ++ +++EDD+E+APDFF+YF+A LL D S+ VS+WNDNG++ Sbjct: 190 HYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKE 249 Query: 781 QFVYD--PKALYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRLKEVRRDRQFIRPE 954 Q V P+ LYR+DFFPGLGW+L W EL PKWPKA+WDDW+R E R+ R +RPE Sbjct: 250 QMVDSSKPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPE 309 Query: 955 VCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWTSEDLSYLTED----NFLIK-FGKDV 1119 + RT FG G S GQFFDQ+LK IKLN + +T DLSYL ++ +FL + +G Sbjct: 310 ISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSYLQQEAYDRDFLARVYGAPQ 369 Query: 1120 ASATPVHGFDELLKAHNLDVERIQYDDQGDFERVARQFGVFEEWK 1254 V D L R+QY + F+ A+ GV ++ K Sbjct: 370 LQVEKVRTNDR----KELGEVRVQYTGRDSFKAFAKALGVMDDLK 410 Score = 33.1 bits (74), Expect(2) = 8e-56 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 Query: 1353 KDGVPRAAYKGVVVFRYKSSRRRIYLVGPDS 1445 K GVPRA Y+G+V F ++ RR++L P + Sbjct: 410 KSGVPRAGYRGIVTFLFRG--RRVHLAPPQT 438
>P26572:MGAT1_HUMAN Alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Homo sapiens (Human) Length = 445 Score = 204 bits (520), Expect(2) = 2e-55 Identities = 104/225 (46%), Positives = 138/225 (61%), Gaps = 7/225 (3%) Frame = +1 Query: 601 HYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQK 780 HY+WAL ++F + F +++EDD+E+APDFF+YF A LL D S+ VS+WNDNG++ Sbjct: 188 HYRWALGQVFRQFRFPAAVVVEDDLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKE 247 Query: 781 QFV--YDPKALYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRLKEVRRDRQFIRPE 954 Q V P+ LYR+DFFPGLGW+L W EL PKWPKA+WDDW+R E R+ R IRPE Sbjct: 248 QMVDASRPELLYRTDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRQGRACIRPE 307 Query: 955 VCRTYNFGEHGSSMGQFFDQYLKPIKLNDAHIDWTSEDLSYLTED----NFLIK-FGKDV 1119 + RT FG G S GQFFDQ+LK IKLN + +T DLSYL + +FL + +G Sbjct: 308 ISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTQLDLSYLQREAYDRDFLARVYGAPQ 367 Query: 1120 ASATPVHGFDELLKAHNLDVERIQYDDQGDFERVARQFGVFEEWK 1254 V D L R+QY + F+ A+ GV ++ K Sbjct: 368 LQVEKVRTNDR----KELGEVRVQYTGRDSFKAFAKALGVMDDLK 408 Score = 33.9 bits (76), Expect(2) = 2e-55 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +3 Query: 1353 KDGVPRAAYKGVVVFRYKSSRRRIYLVGP 1439 K GVPRA Y+G+V F+++ RR++L P Sbjct: 408 KSGVPRAGYRGIVTFQFRG--RRVHLAPP 434
>Q11068:MGAT1_CAEEL Putative alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Caenorhabditis elegans Length = 449 Score = 182 bits (461), Expect(3) = 2e-54 Identities = 94/227 (41%), Positives = 136/227 (59%), Gaps = 9/227 (3%) Frame = +1 Query: 601 HYKWALDELFIKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQK 780 HYK AL+ +F+ + VII EDD++I+PDFF YF + LL+ D+ + V++WNDNG++ Sbjct: 178 HYKLALNHVFVDKGYSSVIITEDDLDISPDFFSYFSSTRYLLENDEKLWCVTAWNDNGKQ 237 Query: 781 QFVYDPKA--LYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRLKEVRRDRQFIRPE 954 + + A LYRSDFF GLGWM++ TW EL P WP +WDDW+R R+DRQ IRPE Sbjct: 238 ENIDMTAASTLYRSDFFAGLGWMMSSKTWHELEPIWPVGFWDDWMRDPARRKDRQCIRPE 297 Query: 955 VCRT--YNFGEHGSSMGQFFDQYLKPIKLNDAHIDWTSEDLSYLTEDNFLIKFGKDVASA 1128 + RT ++G+ G+S GQFF ++L IK+ND +I++ DL YL NF K +V Sbjct: 298 ISRTGMMSYGKEGASKGQFFSKHLAKIKVNDKYINFGKIDLDYLLPANFAKKTNLEVMKE 357 Query: 1129 TPVHGFDE----LLKAHNLDVE-RIQYDDQGDFERVARQFGVFEEWK 1254 D +L + N R+ YD D+ R A + + ++K Sbjct: 358 AVELSIDNVASFVLSSENKGKSVRVMYDGNIDYIRKADKLHIMHDFK 404 Score = 47.0 bits (110), Expect(3) = 2e-54 Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 4/83 (4%) Frame = +3 Query: 357 VVIMACNRPDYLQRTVESILKYQKAVASKFPLFISQDGTNGDVKNKALSY-TQIRYMQHV 533 V++ +CNR ++ VE +++Y+ + KFP+ ++QD N +VKN+ + ++ Y++H+ Sbjct: 95 VLVFSCNRAMAVRDHVEKLIRYRPS-QEKFPIIVTQDCDNENVKNEVKKFGDKVEYIKHL 153 Query: 534 DLEPVHTERPGEH---IAYYKIA 593 + + P H AYY+IA Sbjct: 154 AGDKANITIPPSHRQYTAYYRIA 176 Score = 26.9 bits (58), Expect(3) = 2e-54 Identities = 17/31 (54%), Positives = 18/31 (58%) Frame = +3 Query: 1350 FKDGVPRAAYKGVVVFRYKSSRRRIYLVGPD 1442 FK GVPR AY G+V RIYLV PD Sbjct: 403 FKAGVPRTAYDGIVTCFINGI--RIYLV-PD 430
>Q5XIN7:PMGT1_RAT Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 -| Rattus norvegicus (Rat) Length = 660 Score = 119 bits (298), Expect = 4e-26 Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 7/153 (4%) Frame = +1 Query: 601 HYKWALDELF-IKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQ 777 HYK +L F + + + ++LE+D++IA DFF + + LL+ D S+ +S+WND G Sbjct: 371 HYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGY 430 Query: 778 KQFVYDPKALYRSDFFPGLGWMLTKPTWM-ELSPKWPKAY----WDDWVRLKEVRRDRQF 942 + DP LYR + PGLGW+L K + EL PKWP WD W+R+ E RR R+ Sbjct: 431 EHTAEDPALLYRVETMPGLGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGREC 490 Query: 943 IRPEVCRTYNFGEHGSSM-GQFFDQYLKPIKLN 1038 I P+V R+Y+FG G +M G F + Y K K N Sbjct: 491 IIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFN 523
>Q91X88:PMGT1_MOUSE Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 -| Mus musculus (Mouse) Length = 660 Score = 119 bits (298), Expect = 4e-26 Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 7/153 (4%) Frame = +1 Query: 601 HYKWALDELF-IKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQ 777 HYK +L F + + + ++LE+D++IA DFF + + LL+ D S+ +S+WND G Sbjct: 371 HYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGY 430 Query: 778 KQFVYDPKALYRSDFFPGLGWMLTKPTWM-ELSPKWPKAY----WDDWVRLKEVRRDRQF 942 + DP LYR + PGLGW+L K + EL PKWP WD W+R+ E RR R+ Sbjct: 431 EHTAEDPALLYRVETMPGLGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGREC 490 Query: 943 IRPEVCRTYNFGEHGSSM-GQFFDQYLKPIKLN 1038 I P+V R+Y+FG G +M G F + Y K K N Sbjct: 491 IIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFN 523
>Q5EAB6:PMGT1_BOVIN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 -| Bos taurus (Bovine) Length = 660 Score = 119 bits (298), Expect = 4e-26 Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 7/153 (4%) Frame = +1 Query: 601 HYKWALDELF-IKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQ 777 HYK +L F + + + ++LE+D++IA DFF + + LL+ D S+ +S+WND G Sbjct: 371 HYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGY 430 Query: 778 KQFVYDPKALYRSDFFPGLGWMLTKPTWM-ELSPKWPKAY----WDDWVRLKEVRRDRQF 942 + DP LYR + PGLGW+L K + EL PKWP WD W+R+ E RR R+ Sbjct: 431 EHTAEDPALLYRVETMPGLGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGREC 490 Query: 943 IRPEVCRTYNFGEHGSSM-GQFFDQYLKPIKLN 1038 I P+V R+Y+FG G +M G F + Y K K N Sbjct: 491 IIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFN 523
>Q5RCB9:PMGT1_PONPY Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 -| Pongo pygmaeus (Orangutan) Length = 660 Score = 118 bits (295), Expect = 9e-26 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 7/153 (4%) Frame = +1 Query: 601 HYKWALDELF-IKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQ 777 HYK +L F + + + ++LE+D++IA DFF + + LL+ D S+ +S+WND G Sbjct: 371 HYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGY 430 Query: 778 KQFVYDPKALYRSDFFPGLGWMLTKPTWM-ELSPKWPKAY----WDDWVRLKEVRRDRQF 942 + DP LYR + PGLGW+L + + EL PKWP WD W+R+ E RR R+ Sbjct: 431 EHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGREC 490 Query: 943 IRPEVCRTYNFGEHGSSM-GQFFDQYLKPIKLN 1038 I P+V R+Y+FG G +M G F + Y K K N Sbjct: 491 IIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFN 523
>Q8WZA1:PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 -| Homo sapiens (Human) Length = 660 Score = 118 bits (295), Expect = 9e-26 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 7/153 (4%) Frame = +1 Query: 601 HYKWALDELF-IKHDFRRVIILEDDMEIAPDFFDYFEAAAKLLDTDKSIMAVSSWNDNGQ 777 HYK +L F + + + ++LE+D++IA DFF + + LL+ D S+ +S+WND G Sbjct: 371 HYKASLTATFNLFPEAKFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGY 430 Query: 778 KQFVYDPKALYRSDFFPGLGWMLTKPTWM-ELSPKWPKAY----WDDWVRLKEVRRDRQF 942 + DP LYR + PGLGW+L + + EL PKWP WD W+R+ E RR R+ Sbjct: 431 EHTAEDPALLYRVETMPGLGWVLRRSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGREC 490 Query: 943 IRPEVCRTYNFGEHGSSM-GQFFDQYLKPIKLN 1038 I P+V R+Y+FG G +M G F + Y K K N Sbjct: 491 IIPDVSRSYHFGIVGLNMNGYFHEAYFKKHKFN 523
>Q9XWW1:SPCS2_CAEEL Probable signal peptidase complex subunit 2 - Caenorhabditis elegans| Length = 180 Score = 38.5 bits (88), Expect = 0.091 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%) Frame = +1 Query: 1285 LEMCKV--FRCKPLLLMF*FF----CHFSRTVFHGQLTRVW-WSSDIRAVEDEYTLSA 1437 L +C V F C +L M+ ++ C + T G+ +R W WSS+I+A +D+YTLSA Sbjct: 75 LAVCSVSYFICMGILQMYQWYVEKDCIYEATEVDGKQSRKWAWSSEIKAHDDKYTLSA 132
>P16550:APA1_YEAST Protein APA1 [Includes: 5',5'''-P-1,P-4-tetraphosphate phosphorylase| - Saccharomyces cerevisiae (Baker's yeast) Length = 321 Score = 36.2 bits (82), Expect = 0.45 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = -2 Query: 1332 KHEQ*WFAPEDFTHFQSKLCPAKLHFLPLFKYSKLTSYTLEIALVVILNP 1183 KH Q PE F FQ +LC K HFLP F L + A V+ P Sbjct: 157 KHLQILQMPEKFVTFQDRLCNGKEHFLPTFNTEPLQDAKVSFAHFVLPMP 206
>Q615A2:SPCS2_CAEBR Probable signal peptidase complex subunit 2 - Caenorhabditis briggsae| Length = 180 Score = 35.8 bits (81), Expect = 0.59 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 7/58 (12%) Frame = +1 Query: 1285 LEMCKV--FRCKPLLLMF*FF----CHFSRTVFHGQLTRVW-WSSDIRAVEDEYTLSA 1437 L +C V F C +L +F ++ C + G+ TR W WSS+I+A +D+Y LSA Sbjct: 75 LLVCSVSYFICMGVLQLFQWYVEKDCFYEANEVDGKQTRKWAWSSEIKAHDDKYVLSA 132
>P42092:CGED_BACSU Protein cgeD - Bacillus subtilis| Length = 426 Score = 34.3 bits (77), Expect = 1.7 Identities = 16/59 (27%), Positives = 33/59 (55%) Frame = +3 Query: 354 AVVIMACNRPDYLQRTVESILKYQKAVASKFPLFISQDGTNGDVKNKALSYTQIRYMQH 530 ++++ + N+PDYLQ+ +ES+++ + + LFI D +N + Y R +Q+ Sbjct: 6 SIILTSYNKPDYLQKAIESVIQQTHDL---WELFIMDDHSNAETTAVIHKYLHDRRIQY 61
>P33891:TIP20_YEAST Protein transport protein TIP20 - Saccharomyces cerevisiae (Baker's| yeast) Length = 701 Score = 33.9 bits (76), Expect = 2.2 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +1 Query: 736 KSIMAVSSWNDNGQKQFVYDPKALYRSDFFPGLGWMLTKPTWMELSPKWPKAYWDDWVRL 915 +SI+ ++ +N NG QF++D F L +L+ P+ ++L Sbjct: 601 ESILKLNKFNQNGLNQFLHD---------FKSLSSILSLPSHATNYKCMSLHELVKILKL 651 Query: 916 KEVRRDRQFIRPEVCRTYNFGEHGSSMGQFFD-QYLKPIKLNDA 1044 K ++QF+ PE +T NF +S+ + + +YLK K+ DA Sbjct: 652 KYDPNNQQFLNPEYIKTGNF----TSLKEAYSIKYLKDTKIQDA 691
>Q9PQM4:SYV_UREPA Valyl-tRNA synthetase - Ureaplasma parvum (Ureaplasma urealyticum| biotype 1) Length = 874 Score = 33.9 bits (76), Expect = 2.2 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +1 Query: 1066 DLSYLTEDNFLIKFGKDVASATPVHGFD--ELLKAHNLDVERIQYDD 1200 +++ + +D I+FG V TP H F+ EL K HNL++ I D Sbjct: 256 EMTVILDDYIDIEFGTGVMKCTPAHDFNDYELAKKHNLEIINIMNAD 302
>Q8RA70:MUTL_THETN DNA mismatch repair protein mutL - Thermoanaerobacter tengcongensis| Length = 590 Score = 33.9 bits (76), Expect = 2.2 Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Frame = -2 Query: 1242 KYSKLTSYTLEIALVVILNPFHIQIVGLQQFIESMHRCGTSHIFPKF-DQEIVLREVAQV 1066 +Y ++ S + +VV L P ++IVG ++ E +++ G ++F +F + +VLREV + Sbjct: 443 QYERVQSRQVTFPIVVELQPGDMEIVGQER--ELLYKLG--YVFEEFGNNSVVLREVPVI 498 Query: 1065 LGGP 1054 LG P Sbjct: 499 LGQP 502
>P22108:APA2_YEAST 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 325 Score = 33.5 bits (75), Expect = 2.9 Identities = 20/50 (40%), Positives = 22/50 (44%) Frame = -2 Query: 1332 KHEQ*WFAPEDFTHFQSKLCPAKLHFLPLFKYSKLTSYTLEIALVVILNP 1183 KH Q PE F FQ LC K HFLP F L + A V+ P Sbjct: 160 KHLQIMQMPEKFIPFQDVLCNGKDHFLPTFNAEPLQDDKVSFAHFVLPLP 209
>P39621:SPSA_BACSU Spore coat polysaccharide biosynthesis protein spsA - Bacillus| subtilis Length = 256 Score = 33.1 bits (74), Expect = 3.8 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +3 Query: 342 LPVAAVVIMACNRPDYLQRTVESILKYQKAVASKFPLFISQDGTNGDVKN---KALSYTQ 512 +P +V++ + N+ DY+ +++ SIL S F LFI D +N + N L+ + Sbjct: 1 MPKVSVIMTSYNKSDYVAKSISSIL---SQTFSDFELFIMDDNSNEETLNVIRPFLNDNR 57 Query: 513 IRYMQ 527 +R+ Q Sbjct: 58 VRFYQ 62
>Q8VI59:PCX3_MOUSE Pecanex-like protein 3 - Mus musculus (Mouse)| Length = 1620 Score = 32.3 bits (72), Expect = 6.5 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = -3 Query: 566 PWSFSVHRFEIYMLHISYLGITQGLIFYISICSILRYK*WEL*SNCFLVLEDRFNCPLQI 387 P + F + + H Y ++QG + + S+L K W+L VL + P QI Sbjct: 789 PQQYLTLAFTVLLFHFDYPRLSQGFLLDYFLMSLLCSKLWDLLYKLRFVL--TYIAPWQI 846 Query: 386 VWSIASH 366 W A H Sbjct: 847 TWGSAFH 853
>Q9T6R3:CYB_RANRU Cytochrome b - Rana rugosa (Wrinkled frog)| Length = 380 Score = 32.0 bits (71), Expect = 8.5 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -2 Query: 1266 KLHFLPLFKYSKLTSYTLEIALVVILNPFHIQIVG-LQQFIESMHRCGTSHIFPKFD--- 1099 K+ F P F + L + + + + IL+ F ++G F + HI P++ Sbjct: 218 KVSFHPYFSFKDLLGFIILLGALAILSTFAPNLLGDPDNFTPATPLSTPPHIKPEWYLLF 277 Query: 1098 QEIVLREVAQVLGGPVNMSIV*FDWFQVLIEELSHA*SMLAKVVCSAYFW 949 +LR + LGG + + + F + I S S++ + A+FW Sbjct: 278 AYAILRSILNKLGGVLALLLSIMVLFLMPITHTSKLRSLMFRPTAKAFFW 327 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 327,880,585 Number of extensions: 7605381 Number of successful extensions: 18886 Number of sequences better than 10.0: 21 Number of HSP's gapped: 18871 Number of HSP's successfully gapped: 28 Length of query: 589 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 470 Effective length of database: 68,045,334 Effective search space: 31981306980 Effective search space used: 31981306980 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
