ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf54b01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119547:Os11g0167800 | 75 | 9e-14 | 2 | AK119208:Os11g0167800 | 75 | 9e-14 | 3 | AK104677:Os11g0167800 | 75 | 9e-14 | 4 | AK064892:Os11g0167800 | 75 | 9e-14 | 5 | AF039573:Os11g0167800 | 75 | 9e-14 | 6 | AK105960:Os04g0423400 | 60 | 2e-09 | 7 | AK104594:Os04g0423400 | 60 | 2e-09 | 8 | AK104264:Os04g0423400 | 60 | 2e-09 | 9 | AK103997:Os04g0423400 | 60 | 2e-09 | 10 | AK061494:Os04g0423400 | 60 | 2e-09 | 11 | AK066415:Os02g0543000 | 57 | 2e-08 | 12 | AK062880:Os02g0543000 | 57 | 2e-08 | 13 | AK063053:Os01g0959100 | 54 | 2e-07 | 14 | AK104613:Os01g0963600 | 54 | 2e-07 | 15 | AK065858:Os01g0963600 | 54 | 2e-07 | 16 | AK060804:Os01g0963600 | 54 | 2e-07 | 17 | Os01g0959200:Os01g0959200 | 50 | 2e-06 | 18 | AK062319:Os02g0543000 | 44 | 1e-04 | 19 | AK069019:Os05g0199100 | 29 | 4.5 | 20 | Os04g0388600:Os04g0388600 | 29 | 5.8 |
|---|
>AK119547:Os11g0167800 | Length = 138 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/75 (50%), Positives = 44/75 (58%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELXXXXXXXXXXXXXXXXXXXXXXXX 443 LGE GA+AAGAFALYEKHEAKKDPE+AH+HKI EE+ Sbjct: 64 LGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIAATAAVGAGGYAFHEHHEKKKDHK 123 Query: 444 XXXXASGEKKHHHFG 488 ++GEKKHH FG Sbjct: 124 SAEESTGEKKHHLFG 138
>AK119208:Os11g0167800 | Length = 138 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/75 (50%), Positives = 44/75 (58%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELXXXXXXXXXXXXXXXXXXXXXXXX 443 LGE GA+AAGAFALYEKHEAKKDPE+AH+HKI EE+ Sbjct: 64 LGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIAATAAVGAGGYAFHEHHEKKKDHK 123 Query: 444 XXXXASGEKKHHHFG 488 ++GEKKHH FG Sbjct: 124 SAEESTGEKKHHLFG 138
>AK104677:Os11g0167800 | Length = 138 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/75 (50%), Positives = 44/75 (58%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELXXXXXXXXXXXXXXXXXXXXXXXX 443 LGE GA+AAGAFALYEKHEAKKDPE+AH+HKI EE+ Sbjct: 64 LGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIAATAAVGAGGYAFHEHHEKKKDHK 123 Query: 444 XXXXASGEKKHHHFG 488 ++GEKKHH FG Sbjct: 124 SAEESTGEKKHHLFG 138
>AK064892:Os11g0167800 | Length = 138 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/75 (50%), Positives = 44/75 (58%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELXXXXXXXXXXXXXXXXXXXXXXXX 443 LGE GA+AAGAFALYEKHEAKKDPE+AH+HKI EE+ Sbjct: 64 LGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIAATAAVGAGGYAFHEHHEKKKDHK 123 Query: 444 XXXXASGEKKHHHFG 488 ++GEKKHH FG Sbjct: 124 SAEESTGEKKHHLFG 138
>AF039573:Os11g0167800 | Length = 138 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/75 (50%), Positives = 44/75 (58%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELXXXXXXXXXXXXXXXXXXXXXXXX 443 LGE GA+AAGAFALYEKHEAKKDPE+AH+HKI EE+ Sbjct: 64 LGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIAATAAVGAGGYAFHEHHEKKKDHK 123 Query: 444 XXXXASGEKKHHHFG 488 ++GEKKHH FG Sbjct: 124 SAEESTGEKKHHLFG 138
>AK105960:Os04g0423400 | Length = 237 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/34 (73%), Positives = 33/34 (97%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 LGE+GA+AAGAFA+YE+H+AKKDPE+A +H+IEE Sbjct: 148 LGEVGALAAGAFAMYERHQAKKDPENAQRHRIEE 181
>AK104594:Os04g0423400 | Length = 237 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/34 (73%), Positives = 33/34 (97%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 LGE+GA+AAGAFA+YE+H+AKKDPE+A +H+IEE Sbjct: 148 LGEVGALAAGAFAMYERHQAKKDPENAQRHRIEE 181
>AK104264:Os04g0423400 | Length = 237 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/34 (73%), Positives = 33/34 (97%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 LGE+GA+AAGAFA+YE+H+AKKDPE+A +H+IEE Sbjct: 148 LGEVGALAAGAFAMYERHQAKKDPENAQRHRIEE 181
>AK103997:Os04g0423400 | Length = 237 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/34 (73%), Positives = 33/34 (97%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 LGE+GA+AAGAFA+YE+H+AKKDPE+A +H+IEE Sbjct: 148 LGEVGALAAGAFAMYERHQAKKDPENAQRHRIEE 181
>AK061494:Os04g0423400 | Length = 237 Score = 60.1 bits (144), Expect = 2e-09 Identities = 25/34 (73%), Positives = 33/34 (97%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 LGE+GA+AAGAFA+YE+H+AKKDPE+A +H+IEE Sbjct: 148 LGEVGALAAGAFAMYERHQAKKDPENAQRHRIEE 181
>AK066415:Os02g0543000 | Length = 105 Score = 57.4 bits (137), Expect = 2e-08 Identities = 24/36 (66%), Positives = 33/36 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEEL 371 LG +GA+AAGA+AL+EKH+AKKD E+AH HK++EE+ Sbjct: 40 LGGLGAIAAGAYALHEKHQAKKDTENAHGHKVKEEV 75
>AK062880:Os02g0543000 | Length = 105 Score = 57.4 bits (137), Expect = 2e-08 Identities = 24/36 (66%), Positives = 33/36 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEEL 371 LG +GA+AAGA+AL+EKH+AKKD E+AH HK++EE+ Sbjct: 40 LGGLGAIAAGAYALHEKHQAKKDTENAHGHKVKEEV 75
>AK063053:Os01g0959100 | Length = 96 Score = 53.9 bits (128), Expect = 2e-07 Identities = 21/36 (58%), Positives = 33/36 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEEL 371 L ++GAVAAGA+A++EKH+AKK+PE+A H+++EE+ Sbjct: 32 LAKLGAVAAGAYAMHEKHKAKKEPENARSHRVKEEI 67
>AK104613:Os01g0963600 | Length = 182 Score = 53.5 bits (127), Expect = 2e-07 Identities = 22/34 (64%), Positives = 31/34 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 +GE+GA+A+GAFALYE H+AKKDP +A +H+IE+ Sbjct: 102 VGEIGALASGAFALYEGHQAKKDPANAQRHRIEQ 135
>AK065858:Os01g0963600 | Length = 182 Score = 53.5 bits (127), Expect = 2e-07 Identities = 22/34 (64%), Positives = 31/34 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 +GE+GA+A+GAFALYE H+AKKDP +A +H+IE+ Sbjct: 102 VGEIGALASGAFALYEGHQAKKDPANAQRHRIEQ 135
>AK060804:Os01g0963600 | Length = 182 Score = 53.5 bits (127), Expect = 2e-07 Identities = 22/34 (64%), Positives = 31/34 (91%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 +GE+GA+A+GAFALYE H+AKKDP +A +H+IE+ Sbjct: 102 VGEIGALASGAFALYEGHQAKKDPANAQRHRIEQ 135
>Os01g0959200:Os01g0959200 | Length = 105 Score = 50.4 bits (119), Expect = 2e-06 Identities = 20/34 (58%), Positives = 29/34 (85%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEE 365 + ++GA AAGA+A++EK +AKKDPEHA HK++E Sbjct: 37 IAKLGAAAAGAYAMHEKKQAKKDPEHARSHKMKE 70 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Frame = +3 Query: 279 AVAAGAFALYEKHE---AKKDPEHAHKH 353 AV + FAL+E HE AKK HAH H Sbjct: 77 AVGSAGFALHEHHEKKEAKKHRRHAHHH 104
>AK062319:Os02g0543000 | Length = 91 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/27 (70%), Positives = 25/27 (92%) Frame = +3 Query: 264 LGEMGAVAAGAFALYEKHEAKKDPEHA 344 LG +GA+AAGA+AL+EKH+AKKD E+A Sbjct: 40 LGGLGAIAAGAYALHEKHQAKKDTENA 66
>AK069019:Os05g0199100 | Length = 329 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 653 PLHEQ-QPRLFSTRKIARRENHAQASTRPGPRPSLSRLWNTR 531 P H + +PRL + R RR ASTRP P+ R W TR Sbjct: 16 PFHRRHKPRLAAPRSRPRRRQWPTASTRP-RSPTHRRQWRTR 56
>Os04g0388600:Os04g0388600 | Length = 148 Score = 28.9 bits (63), Expect = 5.8 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -3 Query: 160 SAPPSAAGWKSSPSFLWWNRWWW 92 SA S G P + WW WWW Sbjct: 40 SAECSGGGGGGRPPWWWWCWWWW 62 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,187,487 Number of extensions: 282004 Number of successful extensions: 838 Number of sequences better than 10.0: 20 Number of HSP's gapped: 826 Number of HSP's successfully gapped: 21 Length of query: 329 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 228 Effective length of database: 11,355,714 Effective search space: 2589102792 Effective search space used: 2589102792 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
