ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf57b09 |
|---|---|
| Clone Library Name | barley_pub |
>P59326:YTHD1_MOUSE YTH domain family protein 1 - Mus musculus (Mouse)| Length = 559 Score = 206 bits (524), Expect = 3e-52 Identities = 99/181 (54%), Positives = 125/181 (69%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN +F K F+IKSY+ED +HRSIKY++W ST GN++LD A+R+ K Sbjct: 377 YNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSK---GP 433 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 V+L FSVNGSG FCGVAEM PVD+ S W QDKW G+F VKW +KDVPN LRHI Sbjct: 434 VYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIR 493 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENNDNKPVTNSRDTQEV LE Q+L I +++ T+I +DF YE+R+E + R+++ Sbjct: 494 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEEVVRKER 553 Query: 1708 Q 1710 Q Sbjct: 554 Q 554
>Q9BYJ9:YTHD1_HUMAN YTH domain family protein 1 - Homo sapiens (Human)| Length = 559 Score = 206 bits (523), Expect = 4e-52 Identities = 99/181 (54%), Positives = 125/181 (69%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN +F K F+IKSY+ED +HRSIKY++W ST GN++LDSA+R K Sbjct: 377 YNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSK---GP 433 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 V+L FSVNGSG FCGVAEM PVD+ S W QDKW G+F V+W +KDVPN LRHI Sbjct: 434 VYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIR 493 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENNDNKPVTNSRDTQEV LE Q+L I +++ T+I +DF YE+R+E + R+++ Sbjct: 494 LENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEEEVVRKER 553 Query: 1708 Q 1710 Q Sbjct: 554 Q 554
>Q4R5D9:YTHD2_MACFA YTH domain family protein 2 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 579 Score = 203 bits (517), Expect = 2e-51 Identities = 97/181 (53%), Positives = 126/181 (69%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K F+IKSY+ED +HRSIKYN+W ST GN++LD+AYR+ K Sbjct: 398 YNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGK---GP 454 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 V+L FSVNGSG FCGVAEM VD++ W QDKW G+F V+W +KDVPN+ LRHI Sbjct: 455 VYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIR 514 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENN+NKPVTNSRDTQEV LE Q+L I +++ T+I +DF YE+R+E + ++++ Sbjct: 515 LENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 574 Query: 1708 Q 1710 Q Sbjct: 575 Q 575
>Q9Y5A9:YTHD2_HUMAN YTH domain family protein 2 - Homo sapiens (Human)| Length = 579 Score = 203 bits (517), Expect = 2e-51 Identities = 97/181 (53%), Positives = 126/181 (69%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K F+IKSY+ED +HRSIKYN+W ST GN++LD+AYR+ K Sbjct: 398 YNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGK---GP 454 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 V+L FSVNGSG FCGVAEM VD++ W QDKW G+F V+W +KDVPN+ LRHI Sbjct: 455 VYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIR 514 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENN+NKPVTNSRDTQEV LE Q+L I +++ T+I +DF YE+R+E + ++++ Sbjct: 515 LENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 574 Query: 1708 Q 1710 Q Sbjct: 575 Q 575
>Q0VCZ3:YTHD2_BOVIN YTH domain family protein 2 - Bos taurus (Bovine)| Length = 580 Score = 203 bits (517), Expect = 2e-51 Identities = 97/181 (53%), Positives = 126/181 (69%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K F+IKSY+ED +HRSIKYN+W ST GN++LD+AYR+ K Sbjct: 399 YNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGK---GP 455 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 V+L FSVNGSG FCGVAEM VD++ W QDKW G+F V+W +KDVPN+ LRHI Sbjct: 456 VYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIR 515 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENN+NKPVTNSRDTQEV LE Q+L I +++ T+I +DF YE+R+E + ++++ Sbjct: 516 LENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 575 Query: 1708 Q 1710 Q Sbjct: 576 Q 576
>Q5RFL8:YTHD3_PONPY YTH domain family protein 3 - Pongo pygmaeus (Orangutan)| Length = 585 Score = 201 bits (510), Expect = 1e-50 Identities = 98/180 (54%), Positives = 123/180 (68%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K+ F+IKSY+ED +HRSIKY++W ST GN++LD+AYR+ K Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGK---GP 460 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 ++L FSVNGSG FCGVAEM VD++ W QDKW G+F VKW +KDVPN LRHI Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENNDNKPVTNSRDTQEV LE Q+L I + T+I +DF YE+R+E + RR++ Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRER 580 Score = 33.9 bits (76), Expect = 3.0 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Frame = +1 Query: 592 STVGEGQSYSPMHFPFSNPYYQPPASL--SMGYSNSGTGMSQGDPMLQ--------QEYF 741 S + SY PM P+ YY P S+G + T Q P L + ++ Sbjct: 41 SQTNQSNSYPPMSDPYMPSYYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHY 100 Query: 742 LPDGLLYSPTAV-YRQPFGSYNRAATQPSNA-------SGLFGQGNAPLAFGMQHG 885 +PDG+ P A+ PF + P NA SG GQ A+ +G Sbjct: 101 IPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYG 156
>Q8BYK6:YTHD3_MOUSE YTH domain family protein 3 - Mus musculus (Mouse)| Length = 585 Score = 201 bits (510), Expect = 1e-50 Identities = 98/180 (54%), Positives = 123/180 (68%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K+ F+IKSY+ED +HRSIKY++W ST GN++LD+AYR+ K Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGK---GP 460 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 ++L FSVNGSG FCGVAEM VD++ W QDKW G+F VKW +KDVPN LRHI Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENNDNKPVTNSRDTQEV LE Q+L I + T+I +DF YE+R+E + RR++ Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRER 580 Score = 33.5 bits (75), Expect = 3.9 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Frame = +1 Query: 592 STVGEGQSYSPMHFPFSNPYYQPPASL--SMGYSNSGTGMSQGDPMLQ--------QEYF 741 S + SY PM P+ YY P S+G + T Q P L + ++ Sbjct: 41 SQTNQNNSYPPMSDPYMPSYYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHY 100 Query: 742 LPDGLLYSPTAV-YRQPFGSYNRAATQPSNA-------SGLFGQGNAPLAFGMQHG 885 +PDG+ P A+ PF + P NA SG GQ A+ +G Sbjct: 101 IPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQNSAYSSSYG 156
>Q7Z739:YTHD3_HUMAN YTH domain family protein 3 - Homo sapiens (Human)| Length = 585 Score = 201 bits (510), Expect = 1e-50 Identities = 98/180 (54%), Positives = 123/180 (68%) Frame = +1 Query: 1168 YNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSR 1347 YN DF K+ F+IKSY+ED +HRSIKY++W ST GN++LD+AYR+ K Sbjct: 404 YNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGK---GP 460 Query: 1348 VFLFFSVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHIT 1527 ++L FSVNGSG FCGVAEM VD++ W QDKW G+F VKW +KDVPN LRHI Sbjct: 461 LYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIR 520 Query: 1528 LENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQ 1707 LENNDNKPVTNSRDTQEV LE Q+L I + T+I +DF YE+R+E + RR++ Sbjct: 521 LENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRER 580 Score = 33.9 bits (76), Expect = 3.0 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 18/116 (15%) Frame = +1 Query: 592 STVGEGQSYSPMHFPFSNPYYQPPASL--SMGYSNSGTGMSQGDPMLQ--------QEYF 741 S + SY PM P+ YY P S+G + T Q P L + ++ Sbjct: 41 SQTNQSNSYPPMSDPYMPSYYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHY 100 Query: 742 LPDGLLYSPTAV-YRQPFGSYNRAATQPSNA-------SGLFGQGNAPLAFGMQHG 885 +PDG+ P A+ PF + P NA SG GQ A+ +G Sbjct: 101 IPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYG 156
>Q06390:YD374_YEAST YTH domain-containing protein YDR374C - Saccharomyces cerevisiae| (Baker's yeast) Length = 306 Score = 125 bits (313), Expect = 1e-27 Identities = 58/143 (40%), Positives = 92/143 (64%), Gaps = 1/143 (0%) Frame = +1 Query: 1210 FFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSRVFLFFSVNGSGQFC 1389 FFVIKS + HV RS +W+ST GN++L AY K+ ++VFLFFS+N SG+FC Sbjct: 157 FFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAY---KKLNSGAKVFLFFSINTSGRFC 213 Query: 1390 GVAEMIGPVDFDRSVDYWQQD-KWSGQFPVKWHIIKDVPNTLLRHITLENNDNKPVTNSR 1566 GVAEM+ + D W+ + K+ F V+W I++D+ N L+ + +N+ KP+T+SR Sbjct: 214 GVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSR 273 Query: 1567 DTQEVKLEYGLQMLSIFKNHEAE 1635 DTQE+ G+ ++++FK +++ Sbjct: 274 DTQEIPYSIGISIINLFKTQDSD 296
>Q9QY02:YTDC1_RAT YTH domain-containing protein 1 - Rattus norvegicus (Rat)| Length = 738 Score = 78.2 bits (191), Expect = 1e-13 Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Frame = +1 Query: 1036 NGALEFLNEQNRGPRAAKPKKQDRDNSLVDDK----SEKTTLLIDSELYNRPDFATEYK- 1200 +G+ E E+ R R P DR S + +K L S R D ++ K Sbjct: 295 DGSDEKKKERKRA-RGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKS 353 Query: 1201 ---DAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSRVFLFFSVN 1371 DA FF+IKS ++V + VW++ +KL+ A+R+A+ V L FSV Sbjct: 354 VLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS------VILIFSVR 407 Query: 1372 GSGQFCGVAEMIGPVDFDRSVDYW------QQDKWSGQFPVKWHIIKDVPNTLLRHITLE 1533 SG+F G A + S +W G F + W +++P T H+T Sbjct: 408 ESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNP 467 Query: 1534 NNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQQP 1713 N++KPV RD QE++LE G Q+ +F E+ D Y+ + + R QP Sbjct: 468 WNEHKPVKIGRDGQEIELECGTQLCLLFPPDES-------IDLYQLIHKMRHKRRMHSQP 520 Query: 1714 GS 1719 S Sbjct: 521 RS 522
>Q96MU7:YTDC1_HUMAN YTH domain-containing protein 1 - Homo sapiens (Human)| Length = 727 Score = 78.2 bits (191), Expect = 1e-13 Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 14/242 (5%) Frame = +1 Query: 1036 NGALEFLNEQNRGPRAAKPKKQDRDNSLVDDK----SEKTTLLIDSELYNRPDFATEYK- 1200 +G+ E E+ R R P DR S + +K L S R D ++ K Sbjct: 292 DGSDEKKKERKRA-RGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKY 350 Query: 1201 ---DAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSRVFLFFSVN 1371 DA FF+IKS ++V + VW++ +KL+ A+R+A+ V L FSV Sbjct: 351 VLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS------VILIFSVR 404 Query: 1372 GSGQFCGVAEMIGPVDFDRSVDYW------QQDKWSGQFPVKWHIIKDVPNTLLRHITLE 1533 SG+F G A + S +W G F + W +++P T H+T Sbjct: 405 ESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNP 464 Query: 1534 NNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQQP 1713 N++KPV RD QE++LE G Q+ +F E+ D Y+ + + R QP Sbjct: 465 WNEHKPVKIGRDGQEIELECGTQLCLLFPPDES-------IDLYQVIHKMRHKRRMHSQP 517 Query: 1714 GS 1719 S Sbjct: 518 RS 519
>Q5R746:YTDC2_PONPY YTH domain-containing protein 2 - Pongo pygmaeus (Orangutan)| Length = 671 Score = 73.9 bits (180), Expect = 3e-12 Identities = 45/137 (32%), Positives = 73/137 (53%) Frame = +1 Query: 1210 FFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSRVFLFFSVNGSGQFC 1389 +F++KS ++ S + +W++T S RKL+ A+ + S V+L FSV GSG F Sbjct: 531 YFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFW------ESSMVYLVFSVQGSGHFQ 584 Query: 1390 GVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHITLENNDNKPVTNSRD 1569 G + M + ++S D W G F V+W + +P H+ NDNK V SRD Sbjct: 585 GFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRD 643 Query: 1570 TQEVKLEYGLQMLSIFK 1620 QE++ + G Q+L +++ Sbjct: 644 GQELEPQVGEQLLQLWE 660
>Q9H6S0:YTDC2_HUMAN YTH domain-containing protein 2 - Homo sapiens (Human)| Length = 671 Score = 73.2 bits (178), Expect = 4e-12 Identities = 45/137 (32%), Positives = 73/137 (53%) Frame = +1 Query: 1210 FFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRAAKQKEDHSRVFLFFSVNGSGQFC 1389 +F++KS ++ S + +W++T S RKL+ A+ + S V+L FSV GSG F Sbjct: 531 YFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFW------ESSIVYLVFSVQGSGHFQ 584 Query: 1390 GVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKDVPNTLLRHITLENNDNKPVTNSRD 1569 G + M + ++S D W G F V+W + +P H+ NDNK V SRD Sbjct: 585 GFSRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRD 643 Query: 1570 TQEVKLEYGLQMLSIFK 1620 QE++ + G Q+L +++ Sbjct: 644 GQELEPQVGEQLLQLWE 660
>P56959:FUS_MOUSE RNA-binding protein FUS - Mus musculus (Mouse)| Length = 518 Score = 40.4 bits (93), Expect = 0.032 Identities = 43/148 (29%), Positives = 53/148 (35%) Frame = +1 Query: 532 MLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQ 711 M S Y YGAY GQ YS S PY Q S GY S Sbjct: 1 MASNDYTQQATQSYGAYP----TQPGQGYSQQS---SQPYGQQSYS---GYGQSADTSGY 50 Query: 712 GDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTM 891 G Y Y T Q +GS + S+ S +GQ ++ +G Q Sbjct: 51 GQSSYGSSYGQTQNTGYG-TQSAPQGYGSTGGYGSSQSSQSS-YGQQSSYPGYGQQPAPS 108 Query: 892 YNSGSYKAHQQASKYGGTTPNWGSAGRR 975 SGSY Q+S YG P G G++ Sbjct: 109 STSGSYGGSSQSSSYG--QPQSGGYGQQ 134
>O95487:SC24B_HUMAN Protein transport protein Sec24B - Homo sapiens (Human)| Length = 1268 Score = 37.7 bits (86), Expect = 0.21 Identities = 65/245 (26%), Positives = 86/245 (35%), Gaps = 49/245 (20%) Frame = +1 Query: 382 GEQPYVYQPNVYAPQPQTVYSG------GYINPSGQWEEYP--------------YYVSM 501 G P +Q N A V SG YI PSG + + P YY ++ Sbjct: 35 GAGPAPHQQNGPAQNQMQVPSGYGLHHQNYIAPSGHYSQGPGKMTSLPLDTQCGDYYSAL 94 Query: 502 EGVHSASPSIMLSPGYANNP---QMMYGAYSPV-----STVGEGQ----SYSPMHFPFSN 645 V P+ ++P N Q +Y P ST+G Q S S +H S Sbjct: 95 YTV----PTQNVTPNTVNQQPGAQQLYSRGPPAPHIVGSTLGSFQGAASSASHLHTSASQ 150 Query: 646 PY------YQPPASLSMGYSNSGTGMSQGDPMLQQEYFLP--DGLLYSPTA--------V 777 PY Y PA YS S + SQG P Y + Y + Sbjct: 151 PYSSFVNHYNSPAM----YSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDT 206 Query: 778 YRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGT-MYNSGSYKAHQQASKYGGTTPN 954 Y Q F S N +P + GQ A + H + + S + HQQ S G +T Sbjct: 207 YGQMFTSQNAPTVRPVKDNSFSGQNTA-----ISHPSPLPPLPSQQHHQQQSLSGYSTLT 261 Query: 955 WGSAG 969 W S G Sbjct: 262 WSSPG 266
>P35637:FUS_HUMAN RNA-binding protein FUS - Homo sapiens (Human)| Length = 526 Score = 37.0 bits (84), Expect = 0.36 Identities = 41/136 (30%), Positives = 50/136 (36%) Frame = +1 Query: 532 MLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQ 711 M S Y YGAY GQ YS S PY Q S GYS S Sbjct: 1 MASNDYTQQATQSYGAYP----TQPGQGYSQQS---SQPYGQQSYS---GYSQSTDTSGY 50 Query: 712 GDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTM 891 G Y Y T Q +GS + S+ S +GQ ++ +G Q Sbjct: 51 GQSSYSS-YGQSQNTGYG-TQSTPQGYGSTGGYGSSQSSQSS-YGQQSSYPGYGQQPAPS 107 Query: 892 YNSGSYKAHQQASKYG 939 SGSY + Q+S YG Sbjct: 108 STSGSYGSSSQSSSYG 123
>Q28009:FUS_BOVIN RNA-binding protein FUS - Bos taurus (Bovine)| Length = 513 Score = 37.0 bits (84), Expect = 0.36 Identities = 52/203 (25%), Positives = 65/203 (32%), Gaps = 17/203 (8%) Frame = +1 Query: 415 YAPQPQTVYSGGYINPSGQWEEYPYYVSME----GVHSASPSIMLSPGYANNPQMMYGAY 582 Y QP YS P GQ Y S + G S S S + + Q Y Sbjct: 17 YPTQPGQGYSQQSNQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGYSTQSAPQGY 76 Query: 583 SPVSTVGEGQSYSPMHFPFSN--PYYQPPA------SLSMGYSNSGTGMSQGDPMLQQEY 738 S G QS + S+ Y Q PA S +SG G QG QQ Sbjct: 77 SSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQPQGGGYGQQSG 136 Query: 739 FLPDGLLYSPTAVYRQPFG-----SYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSG 903 + Y Y P G YN + G +GQ ++ G G Sbjct: 137 YGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQPSMSSGG------GGG 190 Query: 904 SYKAHQQASKYGGTTPNWGSAGR 972 Y Q+ YGG + G GR Sbjct: 191 GYGNQDQSGGYGGGQQDRGGRGR 213 Score = 36.6 bits (83), Expect = 0.47 Identities = 39/148 (26%), Positives = 54/148 (36%) Frame = +1 Query: 532 MLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQ 711 M S Y YGAY GQ YS + PY Q GY S Sbjct: 1 MASNDYTQQATQSYGAYP----TQPGQGYSQQS---NQPYGQQSYG---GYGQSTDTSGY 50 Query: 712 GDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTM 891 G Y YS + + + ++Q S +S +GQ ++ +G Q Sbjct: 51 GQSSYSGSYGQTQNTGYSTQSAPQGYSSAGGYGSSQSSQSS--YGQQSSYPGYGQQPAPS 108 Query: 892 YNSGSYKAHQQASKYGGTTPNWGSAGRR 975 SGSY + Q+S YG P G G++ Sbjct: 109 GTSGSYGSSSQSSGYG--QPQGGGYGQQ 134
>P91573:WRT6_CAEEL Warthog protein 6 precursor [Contains: Warthog protein 6 N-product;| Warthog protein 6 C-product] - Caenorhabditis elegans Length = 593 Score = 35.8 bits (81), Expect = 0.80 Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 3/111 (2%) Frame = +1 Query: 400 YQPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGA 579 Y NV AP V S Y + P S G +S P+ S Y P M A Sbjct: 292 YIDNV-APASPVVQSPAYPQTPAEMPLPPQSGSYSGSYSGYPTADASQ-YNAYPAMQQPA 349 Query: 580 YSPVSTVGEGQSYSPMHFPFSNPYYQP---PASLSMGYSNSGTGMSQGDPM 723 Y P +Y P + P P YQP PA + GYS + G+ G M Sbjct: 350 YQP--------AYQPAYQPAYQPAYQPAYQPAYSARGYSPNLNGLFGGTGM 392
>P32597:STH1_YEAST Nuclear protein STH1/NPS1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1359 Score = 35.0 bits (79), Expect = 1.4 Identities = 33/134 (24%), Positives = 59/134 (44%) Frame = +1 Query: 1531 ENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFDFYEQREEALKENRRQQQ 1710 + D++P+ R + V + GL + E + +ED ++R EA +E RR +Q Sbjct: 1041 KKEDSEPLGRIRQKKRVYYDDGLTEEQFLEAVEDDNMSLEDA--IKKRREA-RERRRLRQ 1097 Query: 1711 PGSAESLKPTDAKAVGSSVTHIVDSFSRSVQLKEIEKSDKRTDGAISVNGSQTATVKAEK 1890 G+ E+ T +S T ++++ S + + E +DK T + S S Sbjct: 1098 NGTKENEIETLENTPEASETSLIENNSFTAAVDEETNADKETTASRSKRRSSRKKRTISI 1157 Query: 1891 STANKTTGSVEESS 1932 TA + EES+ Sbjct: 1158 VTAEDKENTQEEST 1171
>P35658:NU214_HUMAN Nuclear pore complex protein Nup214 - Homo sapiens (Human)| Length = 2090 Score = 35.0 bits (79), Expect = 1.4 Identities = 42/172 (24%), Positives = 62/172 (36%), Gaps = 5/172 (2%) Frame = +1 Query: 520 SPSIMLSPGYANNPQMMYG--AYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNS 693 S S SP + ++G + S G+ S + F FS P + + S++ Sbjct: 1704 SSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASST 1763 Query: 694 GTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFG 873 T S G ++ A S++ + P+ GLFGQ NAP AFG Sbjct: 1764 PTSTS--------------GSVFG-AASSTSSSSSFSFGQSSPNTGGGLFGQSNAP-AFG 1807 Query: 874 MQHGTMYNSGSYKAHQQASKYGGT---TPNWGSAGRRFNNFDCNSSQQRGSI 1020 G Q S +GGT T ++G F S GS+ Sbjct: 1808 QSPG---------FGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSV 1850
>P19198:CAP1_DICDI cAMP-binding protein CABP1A/CABP1B - Dictyostelium discoideum| (Slime mold) Length = 333 Score = 35.0 bits (79), Expect = 1.4 Identities = 43/150 (28%), Positives = 52/150 (34%), Gaps = 16/150 (10%) Frame = +1 Query: 568 MYGAYSPVSTVGEGQSY-SPMHFP-FSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYF 741 MY P + G Y P P SNP P A+ + S T + G QQ+ Sbjct: 1 MYNPPPPSGSQGNNNYYRQPSSTPGVSNP--NPQANQFLPPQPSNTTQTPGGYPPQQQQR 58 Query: 742 LPDGLLYSPTAV--------------YRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQ 879 P G P +QP G Y Q GQ AP G Q Sbjct: 59 PPTGAPQQPGGYPTPPPPGAPGGYPPQQQPAGQYGAPPQQQPA-----GQYGAPQPAG-Q 112 Query: 880 HGTMYNSGSYKAHQQASKYGGTTPNWGSAG 969 +G +G Y A Q A +YG P G AG Sbjct: 113 YGAPQPAGQYGAPQPAGQYGAPPPPPGGAG 142
>Q9XZI6:PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11 -| Caenorhabditis elegans Length = 586 Score = 34.7 bits (78), Expect = 1.8 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 15/142 (10%) Frame = +1 Query: 418 APQPQTVYSGGYINPSGQW---EEYPYYVSMEGVHSA------SPSIMLSPGYANNPQMM 570 AP PQT NP G + +P V HSA +P +P YAN + Sbjct: 395 APAPQTA---DVTNPFGNFAAPSAFPTNVPPPAAHSAPFGVQPAPQHSAAPFYAN----L 447 Query: 571 YGAYSPVSTVGEGQSYSPMHFPFSNP--YYQPPASLSMGYSNSGTGMSQGDPMLQQEYF- 741 + A S G +P +P ++P + A +S+ + G + + F Sbjct: 448 HQAPPMQSQAPNGHQAAPFGYPNAHPDDLARMTAQMSLNQQGAPAGWNTTTSAVSNNPFG 507 Query: 742 ---LPDGLLYSPTAVYRQPFGS 798 P + +P +Y+QPFG+ Sbjct: 508 ATSAPQPMYTAPMGMYQQPFGA 529
>Q9QYX7:PCLO_MOUSE Protein piccolo - Mus musculus (Mouse)| Length = 5038 Score = 34.7 bits (78), Expect = 1.8 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +1 Query: 439 YSGGYINPSGQWEEYPYYVSMEGVH-SASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQS 615 Y G P + P + H A P++ L+P +P+++Y SP+S + G + Sbjct: 3479 YMGATSPPKDKKRPTPLEIGYSSSHLRADPTVQLAPSPPKSPKVLY---SPISPLSPGHA 3535 Query: 616 YSPMHFPFSNP 648 P P+ P Sbjct: 3536 LEPAFVPYEKP 3546
>Q9JKS6:PCLO_RAT Protein piccolo - Rattus norvegicus (Rat)| Length = 5085 Score = 34.3 bits (77), Expect = 2.3 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +1 Query: 439 YSGGYINPSGQWEEYPYYVSMEGVH-SASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQS 615 Y G P + P + H A P++ L+P +P+++Y SP+S + G + Sbjct: 3525 YLGATSPPKDKKRPTPLEIGYSSSHLRADPTVQLAPSPPKSPKVLY---SPISPLSPGNA 3581 Query: 616 YSPMHFPFSNP 648 P P+ P Sbjct: 3582 LEPAFVPYEKP 3592
>P10388:GLT5_WHEAT Glutenin, high molecular weight subunit DX5 precursor - Triticum| aestivum (Wheat) Length = 839 Score = 34.3 bits (77), Expect = 2.3 Identities = 52/212 (24%), Positives = 66/212 (31%) Frame = +1 Query: 400 YQPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGA 579 Y P+V PQ Q Y G +P + +G + SP PG P+ Sbjct: 112 YYPSVTCPQ-QVSYYPGQASPQRPGQGQQPGQGQQGYYPTSPQ---QPGQWQQPEQGQQG 167 Query: 580 YSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLL 759 Y P S GQ QP G G QG P Sbjct: 168 YYPTSPQQPGQ------------LQQPAQGQQPGQGQQGQQPGQGQPG------------ 203 Query: 760 YSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYG 939 Y PT+ QP QP A G GQ G Q G G + QQ + Sbjct: 204 YYPTSSQLQP-----GQLQQP--AQGQQGQQPGQAQQGQQPGQGQQPGQGQQGQQPGQ-- 254 Query: 940 GTTPNWGSAGRRFNNFDCNSSQQRGSIPFNIQ 1035 G P G G++ Q+G P ++Q Sbjct: 255 GQQPGQGQQGQQL------GQGQQGYYPTSLQ 280
>Q01844:EWS_HUMAN RNA-binding protein EWS - Homo sapiens (Human)| Length = 656 Score = 34.3 bits (77), Expect = 2.3 Identities = 60/260 (23%), Positives = 89/260 (34%), Gaps = 32/260 (12%) Frame = +1 Query: 466 GQWEEYPYYVSMEGVHSAS-PSIMLSPGYANNPQMMYGAYSPVSTVGEGQS-YS------ 621 G YP Y + + P P + PQ G Y+ S +G GQS YS Sbjct: 119 GTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPS-LGYGQSNYSYPQVPG 177 Query: 622 --PMHFPFSNPYYQPPASLSM---------GYSNSGTGMSQGDPMLQQEYFLPDGLLYSP 768 PM P + P PP S S YS T Q Y P Sbjct: 178 SYPMQ-PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP 236 Query: 769 TAVYRQPFGSYNRAATQPSNASGLFGQGNA-----PLA---FGMQHGTMYNSGSYKA--- 915 Y GSY++A +Q S S +GQ ++ P + +G + G G ++ Sbjct: 237 PTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSG 296 Query: 916 --HQQASKYGGTTPNWGSAGRRFNNFDCNSSQQRGSIPFNIQNGALEFLNEQNRGPRAAK 1089 ++ + G GR S+ +RG FN G ++ + + GP Sbjct: 297 PDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGG--FNKPGGPMDEGPDLDLGPPVDP 354 Query: 1090 PKKQDRDNSLVDDKSEKTTL 1149 + D V ++ TL Sbjct: 355 DEDSDNSAIYVQGLNDSVTL 374
>Q497V6:BAHD1_MOUSE Bromo adjacent homology domain-containing 1 protein - Mus musculus| (Mouse) Length = 772 Score = 34.3 bits (77), Expect = 2.3 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 9/111 (8%) Frame = +1 Query: 397 VYQPNVYAPQ----PQTVYSGGYINPSGQWE-----EYPYYVSMEGVHSASPSIMLSPGY 549 ++QP+ APQ P Y P G E + Y +G+ + Y Sbjct: 335 LHQPSFPAPQLSPLPMPGNPADYSGPCGGPELTALGSFYLYCGQDGLQCGA--------Y 386 Query: 550 ANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTG 702 + P + G SPV+ EG +P P P+ PP S S+ TG Sbjct: 387 SPCPMLPEGKLSPVAAPNEGLLMAPSSVPSGVPFQHPPWSAPRYCSSEDTG 437
>O74345:UCP3_SCHPO UBA domain-containing protein 3 - Schizosaccharomyces pombe| (Fission yeast) Length = 601 Score = 33.9 bits (76), Expect = 3.0 Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 3/184 (1%) Frame = +1 Query: 292 EKTSASDARGSTSLKSPKGAQEKANFLGKGGEQPYVYQPNVYAPQPQTVYSGGYINPSGQ 471 E+ +A S + + + N G+ + PY VY S + +G Sbjct: 424 EQPAAPSNSNSQYMNTSMPTLDSTNMYGQSNQDPYSMSNGVYGSNYSAQPSTMQMQATGI 483 Query: 472 WEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPY 651 P +SM+ P M S GY + + Y+ +S G G + M++ Sbjct: 484 APPQPN-MSMQ-----MPMSMQSTGYQMPMENTWVDYNGMSQQGNGMQPATMNY------ 531 Query: 652 YQPPASLSMGYSNSGTGMSQGDPMLQQEY---FLPDGLLYSPTAVYRQPFGSYNRAATQP 822 S SMGY T + + QQ Y +P Y+ T Y QP + P Sbjct: 532 -----SNSMGYD---TNVPADNGYYQQGYGNVMMPPDASYTGTGSYVQPMNQPSGGMGAP 583 Query: 823 SNAS 834 +++S Sbjct: 584 ADSS 587
>Q9NHP5:TBP_DROVI TATA-box-binding protein - Drosophila virilis (Fruit fly)| Length = 349 Score = 33.9 bits (76), Expect = 3.0 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 8/84 (9%) Frame = +1 Query: 724 LQQEYFLPDGLLYSPTAV-----YRQPFGSYNRAATQPSNASGLFG-QGNAPLAF--GMQ 879 L + + P L +PTA +QP G+ +A S S LFG + + PLA Q Sbjct: 34 LPHQVYHPAALDPTPTATTTVQQQQQPDGNNGVSAADGSGGSNLFGHEPSIPLAHKQSYQ 93 Query: 880 HGTMYNSGSYKAHQQASKYGGTTP 951 Y + Q+S GGTTP Sbjct: 94 PSASYQQQQQQQQNQSSNTGGTTP 117
>Q6GX35:TARP2_CHLTR Translocated actin-recruiting phosphoprotein - Chlamydia trachomatis| Length = 1005 Score = 33.9 bits (76), Expect = 3.0 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = +1 Query: 1735 PTDAKAVGSSVTHIVDSFSRSVQLKEIEKSDKRTDGAISVNGSQTATVKAEKSTANKTTG 1914 PT S+ T +D+ + + Q +I +DK +DGA VNG + T +S++ +G Sbjct: 674 PTTQSTDASTDTSDIDNINTNNQTDDINTTDKDSDGAGGVNGDISET----ESSSGDDSG 729 Query: 1915 SVEES 1929 SV S Sbjct: 730 SVSSS 734
>P35084:RPB1_DICDI DNA-directed RNA polymerase II subunit RPB1 - Dictyostelium| discoideum (Slime mold) Length = 902 Score = 33.9 bits (76), Expect = 3.0 Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 14/116 (12%) Frame = +1 Query: 520 SPSIMLSPGYANNPQMMYGA----------YSPVSTVGEGQSYSPMHFPFS--NPYYQPP 663 SPS M SPGY N YG+ YSP S SYSP +S +P Y P Sbjct: 700 SPSAMNSPGY--NANKSYGSSYQYFPQSPTYSPTS-----PSYSPTSPSYSPTSPSYSP- 751 Query: 664 ASLSMGYSNSGTGMSQGDPMLQ--QEYFLPDGLLYSPTAVYRQPFGSYNRAATQPS 825 S YS + S P ++ P YSPT+ P S + + T PS Sbjct: 752 --TSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSP-TSPSYSPTSPS 804
>P06256:NU2C_TOBAC NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Nicotiana| tabacum (Common tobacco) Length = 510 Score = 33.9 bits (76), Expect = 3.0 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAV--LLVQKLQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + L++ L ++++ I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVLIGLLTSVVSIYYYLKIIKLLMTGRNQEITPHVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S++VC++ S I+ SM Sbjct: 478 NSIELSMIVCVIASTILGISM 498
>A1CEK6:HSE1_ASPCL Class E vacuolar protein-sorting machinery protein hse1 -| Aspergillus clavatus Length = 599 Score = 33.9 bits (76), Expect = 3.0 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Frame = +1 Query: 340 PKGAQEKANFLGKGGEQPYVYQPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSA 519 P GA + +Q Y P+ Y+P+ T P Q + PY G H A Sbjct: 490 PPGASAPPGVHQQLQQQQQEYSPSNYSPEDTTNPPTANFPPQPQQSQLPYPTGPAG-HQA 548 Query: 520 SPSIMLS--PGYANNPQMMYGAYSPVSTVGEGQSYSP 624 PS PG A+ P + GE Q+Y+P Sbjct: 549 PPSHQPPPVPGGASKPSPYPSLTPGAPSAGEYQAYNP 585
>O84462:TARP1_CHLTR Translocated actin-recruiting phosphoprotein - Chlamydia trachomatis| Length = 1005 Score = 33.5 bits (75), Expect = 3.9 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = +1 Query: 1735 PTDAKAVGSSVTHIVDSFSRSVQLKEIEKSDKRTDGAISVNGSQTATVKAEKSTANKTTG 1914 PT S+ T +D + + Q +I +DK +DGA VNG + T +S++ +G Sbjct: 552 PTTQSTDASTDTSDIDDINTNNQTDDINTTDKDSDGAGGVNGDISET----ESSSGDDSG 607 Query: 1915 SVEES 1929 SV S Sbjct: 608 SVSSS 612
>O75112:LDB3_HUMAN LIM domain-binding protein 3 - Homo sapiens (Human)| Length = 727 Score = 33.5 bits (75), Expect = 3.9 Identities = 29/113 (25%), Positives = 46/113 (40%) Frame = +1 Query: 403 QPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGAY 582 +P+VY P P + YS +P + PY S ++ SP +P Y +P Y Sbjct: 404 RPSVYQPVPASTYSP---SPGANYSPTPYTPSPAPAYTPSP----APAYTPSP---VPTY 453 Query: 583 SPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYF 741 +P S +P + P P Y P S++ YS + P + + F Sbjct: 454 TP--------SPAPAYTPSPAPNYNPAPSVA--YSGGPAEPASRPPWVTDDSF 496
>P28548:CSK2B_CAEEL Casein kinase II subunit beta - Caenorhabditis elegans| Length = 234 Score = 33.5 bits (75), Expect = 3.9 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +1 Query: 838 LFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGTTPNWGSAGRRFNNF 987 L+G P+A+G Q G NSG A+ A+ TTP +G +FNN+ Sbjct: 186 LYGFKIHPVAYGGQEG---NSGGNTANNVAAAQNNTTPAGQQSGGQFNNY 232
>P40049:YEQ6_YEAST Putative uncharacterized protein YER076C precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 302 Score = 33.1 bits (74), Expect = 5.2 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +3 Query: 480 VSLLCEYGRSPFCVTFNHAISWVCE--QPPNDVWS 578 VS + +G++ FCVT++H SW E ND WS Sbjct: 240 VSSMHNHGKTAFCVTYSHGDSWRAELRVVANDAWS 274
>Q0U4Z8:VPS27_PHANO Vacuolar protein sorting-associated protein 27 - Phaeosphaeria| nodorum (Septoria nodorum) Length = 720 Score = 33.1 bits (74), Expect = 5.2 Identities = 44/198 (22%), Positives = 66/198 (33%), Gaps = 25/198 (12%) Frame = +1 Query: 304 ASDARGSTSLKSPKGAQEKANFLGKGGEQPYVYQPNVYAPQPQTVYSGGYINPSGQWEEY 483 AS+ S +P GA E PY + YA Q+ Y P E+Y Sbjct: 465 ASNLYPSIQSGAPSGAGENYYTGNASQSDPYGRPQSHYAGGYQSTSQQPYRTPGQSQEQY 524 Query: 484 P-------YYVSM-------EGVHSASPSIML--SPGYANNPQMMYGAYSPVSTVGEGQS 615 P Y ++ +SP + +P PQ Y + +P STV + +S Sbjct: 525 PPAQQPSQPYPNLSQQAPPSSNYQQSSPQLQRQEAPNQQYPPQQAYPSQAPPSTVSDAES 584 Query: 616 YSPMHFPFSNPYY---------QPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSP 768 +N YY QPP S +++ P + + P SP Sbjct: 585 --------ANYYYGDNTQGQPSQPPMQRSQSFASQPAQQQPPSPQM-YNHAPPQQTPLSP 635 Query: 769 TAVYRQPFGSYNRAATQP 822 A + S + A P Sbjct: 636 PAYQNPSYPSQQQTAPPP 653
>Q6AYN2:TMM66_RAT Transmembrane protein 66 precursor - Rattus norvegicus (Rat)| Length = 334 Score = 33.1 bits (74), Expect = 5.2 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 6/115 (5%) Frame = +1 Query: 646 PYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPS 825 PY + P +GT + P + ++ P Y ++ + FG + A++ P Sbjct: 198 PYSEHPPYSQHSQRFAGTAGAP-PPGFKSDFTGPQSTSYGASSGFGSAFGGQSYASSGPG 256 Query: 826 NASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGT------TPNWGSAGR 972 SGL G FG SGS+ S Y G +P G AGR Sbjct: 257 FWSGLGAGGLLGYLFGSNRAATPFSGSWYHPSYPSSYAGAWNSHAYSPLGGGAGR 311
>P35074:RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1 - Caenorhabditis briggsae| Length = 1853 Score = 33.1 bits (74), Expect = 5.2 Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Frame = +1 Query: 484 PYYVSME-GVHS-ASPSI-MLSPGYANNPQMMYGAYSPVSTVGEGQS-YSPMHFPFSNPY 651 P Y M GV+S ASP M SP Y+ +YSP S GQS SP + P ++P Sbjct: 1568 PAYGGMSPGVYSPASPGFSMTSPHYSPTSP----SYSPTSPAHHGQSPVSPSYSP-TSPS 1622 Query: 652 YQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPS 825 Y P S YS + S P + P YSPT+ P S + + T PS Sbjct: 1623 YSP---TSPSYSPTSPSYSPTSPS-----YSPTSPSYSPTSPSYSP-TSPSYSPTSPS 1671
>Q5F3S2:PKHB2_CHICK Pleckstrin homology domain-containing family B member 2 - Gallus| gallus (Chicken) Length = 224 Score = 33.1 bits (74), Expect = 5.2 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +1 Query: 418 APQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGAYSPVST 597 AP P T Y+ PS + Y Y H A P++ PQ+ Y + Sbjct: 128 APPPYTAYA----TPSPEVYGYGY----GQYHGAYPTV--------GPQVFYAS------ 165 Query: 598 VGEGQSYS-PMHFPFSNPYYQPPAS 669 GQ+Y P +P+ PY QPPA+ Sbjct: 166 --NGQAYDVPYQYPYHGPYGQPPAN 188
>Q589A5:NU2C_SILLA NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Silene| latifolia (White campion) (Bladder campion) Length = 510 Score = 33.1 bits (74), Expect = 5.2 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 8/82 (9%) Frame = -2 Query: 1101 LFLWFCSTWAA---VLLVQKLQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRS 946 L+L++C W A +L++ L +++L I +Y L+TG +I R+P+RS Sbjct: 418 LYLFWCG-WQAGLYLLVLIGLLTSVLSIYYYLKIIKLLMTGRNQEITPHVRNYRRSPLRS 476 Query: 945 SASIFTSLLVCLVGSRIIHCSM 880 SI S++VC++ S I SM Sbjct: 477 KNSIELSMIVCVIASTIPGISM 498
>Q02630:NU116_YEAST Nucleoporin NUP116/NSP116 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1113 Score = 33.1 bits (74), Expect = 5.2 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 11/118 (9%) Frame = +1 Query: 751 GLLYSPTAVYRQPFGSYNRAAT--------QPSNASGLFGQGNAPLAFGMQHGTMYNSGS 906 G+ +PT FG N+ + Q SNA GLFGQ N G +S + Sbjct: 371 GMNTNPTGTTGGLFGQTNQQQSGGGLFGQQQNSNAGGLFGQNNQSQNQSGLFGQQNSSNA 430 Query: 907 YKAHQQASKYGGTTPNWGSAGRRFNNFDCNSSQQRGSIPF---NIQNGALEFLNEQNR 1071 + QQ G+ P G G QQ+G+ F N QN ++ N Q + Sbjct: 431 FGQPQQQGGLFGSKPAGGLFG-----------QQQGASTFASGNAQNNSIFGQNNQQQ 477
>Q9UKN7:MYO15_HUMAN Myosin-XV - Homo sapiens (Human)| Length = 3530 Score = 33.1 bits (74), Expect = 5.2 Identities = 40/152 (26%), Positives = 52/152 (34%), Gaps = 10/152 (6%) Frame = +1 Query: 364 NFLGKGGEQPY-VYQPNVYAP--QPQTVYSGGYIN-------PSGQWEEYPYYVSMEGVH 513 ++ G E PY Y P+ Y P Y GY + PSG Y Y+ EG Sbjct: 277 HYYGYPPEDPYDYYHPDYYGGPFDPGYTYGYGYDDYEPPYAPPSGYSSPYSYHDGYEG-- 334 Query: 514 SASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNS 693 A P GY +P Y A P + P H P+ PY+ P Sbjct: 335 EAHPY-----GYYLDPYAPYDAPYPPYDL-------PYHTPYDVPYFDP----------- 371 Query: 694 GTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQP 789 G+ P + Y D +Y P Y P Sbjct: 372 -YGVHYTVPYAEGVYGGGDEAIYPPEVPYFYP 402
>Q8TFZ1:XRN2_ASPFU 5'-3' exoribonuclease 2 - Aspergillus fumigatus (Sartorya fumigata)| Length = 1058 Score = 32.7 bits (73), Expect = 6.7 Identities = 28/117 (23%), Positives = 43/117 (36%) Frame = +1 Query: 622 PMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSY 801 P H S +++PP G G QQ Y Y+ ++ Y Q Y Sbjct: 955 PPHGGMSGSHHRPPYGQGPGQYQGNHGQGDHYGQGQQGY-------YNQSSYYNQS-NQY 1006 Query: 802 NRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGTTPNWGSAGR 972 N ++ + G G G G G Y G Y+ +Q ++ ++ N G GR Sbjct: 1007 NGRSSDHGGSGGYRGGG------GYHRGGNYRGGGYRDQRQYNQDQYSSRNSGGYGR 1057
>P18616:RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1840 Score = 32.7 bits (73), Expect = 6.7 Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Frame = +1 Query: 484 PYYVSMEGVHSASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPP 663 PY+ M SP+ +LSP +P M +SP VG G ++SP P +P Sbjct: 1502 PYHEGM-----MSPNYLLSPNMRLSP-MSDAQFSPY--VG-GMAFSPSSSPGYSPSSPGY 1552 Query: 664 ASLSMGYSNSGTGMSQGDPMLQ--QEYFLPDGLLYSPTAVYRQPFGSYNRAATQPS 825 + S GYS + G S P + P YSPT+ P S + + T PS Sbjct: 1553 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP-TSPSYSPTSPS 1607
>Q16825:PTN21_HUMAN Tyrosine-protein phosphatase non-receptor type 21 - Homo sapiens| (Human) Length = 1174 Score = 32.7 bits (73), Expect = 6.7 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 2/176 (1%) Frame = +1 Query: 403 QPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGAY 582 QP V P PQ Y+G Y P ++ + + G + S + + + Q+ + Sbjct: 335 QPYVMPPPPQLHYNGHYTEPYASSQDNLFVPNQNGYYCHSQTSL------DRAQIDFNGR 388 Query: 583 SPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLY 762 +V S + ++ P PY Q P+ +S S +G+ + + D + + Y Sbjct: 389 IRNGSVYSAHSTNSLNNP--QPYLQ-PSPMSSNPSITGSDVMRPDYLPSHRHSAVIPPSY 445 Query: 763 SPTAVYRQPFGSYNRAATQPSNASGLFGQGN--APLAFGMQHGTMYNSGSYKAHQQ 924 PT Y NR S N + A+ +Y+ + H Q Sbjct: 446 RPTPDYETVMKQLNRGLVHAERQSHSLRNLNIGSSYAYSRPAALVYSQPEIREHAQ 501
>P12125:NU2C_ORYSJ NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Oryza sativa| subsp. japonica (Rice) Length = 510 Score = 32.7 bits (73), Expect = 6.7 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWY---APPLLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>P0C347:NU2C_ORYSI NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Oryza sativa| subsp. indica (Rice) Length = 510 Score = 32.7 bits (73), Expect = 6.7 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWY---APPLLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>P0C346:NU2C_ORYSA NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Oryza sativa| (Rice) Length = 510 Score = 32.7 bits (73), Expect = 6.7 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWY---APPLLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIVKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>Q02629:NU100_YEAST Nucleoporin NUP100/NSP100 - Saccharomyces cerevisiae (Baker's yeast)| Length = 959 Score = 32.7 bits (73), Expect = 6.7 Identities = 60/271 (22%), Positives = 94/271 (34%), Gaps = 4/271 (1%) Frame = +1 Query: 790 FGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGTTPNWGSAG 969 FG+ + ++P+ GLFG N S S Q +GGTT N G G Sbjct: 508 FGAKPDSQSKPALGGGLFGNSN--------------SNSSTIGQNKPVFGGTTQNTGLFG 553 Query: 970 RRFNNFDCNSSQQRGSIPFNIQNGALEFLNEQNRGPRAAKPKKQDRDNSLVDDK---SEK 1140 N S + F N L N G + P N+L+ S + Sbjct: 554 ATGTNSSAVGSTGK---LFGQNNNTL------NVGTQNVPPVNNTTQNALLGTTAVPSLQ 604 Query: 1141 TTLLIDSELYNRPDFATEYKDAIFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRA 1320 + + +L+++ + + T V+ +K N L SAYR Sbjct: 605 QAPVTNEQLFSKISIPNSITNPV-----KATTSKVNADMKRN---------SSLTSAYRL 650 Query: 1321 AKQKEDHSRVFLFF-SVNGSGQFCGVAEMIGPVDFDRSVDYWQQDKWSGQFPVKWHIIKD 1497 A + LF S NG +F + + D S D S ++ D Sbjct: 651 APKP-------LFAPSSNGDAKFQKWGKTLERSDRGSSTSNSITDPESSYLNSN-DLLFD 702 Query: 1498 VPNTLLRHITLENNDNKPVTNSRDTQEVKLE 1590 L+H+ ++NN N V N D + K++ Sbjct: 703 PDRRYLKHLVIKNNKNLNVINHNDDEASKVK 733
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus| (Mouse) Length = 301 Score = 32.7 bits (73), Expect = 6.7 Identities = 23/73 (31%), Positives = 29/73 (39%) Frame = +1 Query: 778 YRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGTTPNW 957 Y Q +G+YN A N SG +G T YN G+Y Q + Y G + Sbjct: 235 YDQGYGNYNSAYGGDQNYSG----------YGGYDYTGYNYGNYGYGQGYADYSGQQSTY 284 Query: 958 GSAGRRFNNFDCN 996 G A R N N Sbjct: 285 GKASRGGGNHQNN 297
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens| (Human) Length = 420 Score = 32.7 bits (73), Expect = 6.7 Identities = 23/73 (31%), Positives = 29/73 (39%) Frame = +1 Query: 778 YRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGTTPNW 957 Y Q +G+YN A N SG +G T YN G+Y Q + Y G + Sbjct: 354 YDQGYGNYNSAYGGDQNYSG----------YGGYDYTGYNYGNYGYGQGYADYSGQQSTY 403 Query: 958 GSAGRRFNNFDCN 996 G A R N N Sbjct: 404 GKASRGGGNHQNN 416
>Q61545:EWS_MOUSE RNA-binding protein EWS - Mus musculus (Mouse)| Length = 655 Score = 32.7 bits (73), Expect = 6.7 Identities = 36/120 (30%), Positives = 45/120 (37%), Gaps = 17/120 (14%) Frame = +1 Query: 541 PGYANNPQMMYGAYSPVSTVGEGQS-YSPMHFPFS---NPYYQPPASLSMGYSNSG-TGM 705 P + PQ G Y+ S +G GQS YS P S P PP+ YS+S T Sbjct: 145 PAETSQPQSSTGGYNQPS-LGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSY 203 Query: 706 SQGDPMLQQEYFLPDGLLYS------------PTAVYRQPFGSYNRAATQPSNASGLFGQ 849 Q Q Y P P Y GSY++A +Q S S +GQ Sbjct: 204 DQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQ 263
>P35085:CBPA_DICDI Calcium-binding protein - Dictyostelium discoideum (Slime mold)| Length = 467 Score = 32.7 bits (73), Expect = 6.7 Identities = 48/178 (26%), Positives = 63/178 (35%), Gaps = 21/178 (11%) Frame = +1 Query: 373 GKGGEQPYVYQPNVYAPQPQTVYSGGYINPSG----QWEEYP-----------YYVSMEG 507 G+ G P QP Y PQ Q V G P G Q YP Y +G Sbjct: 243 GQPGAYPPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYPGQQGAYPGQQG 302 Query: 508 VHSASPSIMLSPGYANNPQMMYG--AYSPVSTVGEGQSY---SPMH-FPFSNPYYQPPAS 669 + P + PG Q YG AYS + + +Y +PM +P Y + Sbjct: 303 AYPGQPPMGAYPG-----QQQYGVSAYSQTTAAYQTGAYPGQTPMGVYPGQTTAYAAYQT 357 Query: 670 LSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLF 843 ++GY + T S P Y P YS TA + P G + AS F Sbjct: 358 TAIGYGATST-YSYTRP--TYSYATP----YSRTAAFVVPVGLPPHVVQKMMAASAAF 408
>P33204:ARPC4_YEAST ARP2/3 complex 20 kDa subunit - Saccharomyces cerevisiae (Baker's| yeast) Length = 171 Score = 32.7 bits (73), Expect = 6.7 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%) Frame = +1 Query: 1495 DVPNT----LLRHITLENNDNKPVTNSRDTQEVKLEYGLQMLSIFKNHEAETTIVEDFD- 1659 +VPNT LL+ + + N+N+ V V++ L + + E E +V F Sbjct: 39 EVPNTSAELLLQPMHISRNENEQVLIEPSVNSVRMS-----LMVKQADEIEQILVHKFTR 93 Query: 1660 FYEQREEALKENRRQQQPGSAESL----KPTDAKAVGSSVTHIVD 1782 F EQR EA RR PG + S K T++ G V I++ Sbjct: 94 FLEQRAEAFYILRRVPIPGYSISFLITNKHTESMKTGKLVDFIIE 138
>O13772:YE9A_SCHPO Uncharacterized proline/serine-rich protein C17A5.10 -| Schizosaccharomyces pombe (Fission yeast) Length = 224 Score = 32.3 bits (72), Expect = 8.8 Identities = 37/131 (28%), Positives = 48/131 (36%) Frame = +1 Query: 586 PVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYS 765 PVS+ G G +YS +P + P Q P S G N+ T + P P Y Sbjct: 57 PVSSSGSGNAYSQAPYPPARPTSQRPNSWQPG--NASTMYASPPPSSNYNTAKPP---YQ 111 Query: 766 PTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAHQQASKYGGT 945 + Y +P SY A PS G +++ G M YK H K G Sbjct: 112 TSQFYARPQSSY---APPPS--------GRPRISYPYPPGYM----CYKCHNTGYKDSGR 156 Query: 946 TPNWGSAGRRF 978 G RRF Sbjct: 157 P--CGRCARRF 165
>Q9ZE65:Y082_RICPR Uncharacterized protein RP082 - Rickettsia prowazekii| Length = 143 Score = 32.3 bits (72), Expect = 8.8 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Frame = +1 Query: 1510 LLRHITLENNDNKPVTNSRDTQE------VKLEYGLQMLSIFKNHEAETTIVEDFDFYEQ 1671 L R I L +N N+ +++ QE V EY M +FKN E D EQ Sbjct: 43 LQRQIILNHNQNEVNSHTTKNQEKFKTDNVTEEYLEDMALMFKNSE---------DTAEQ 93 Query: 1672 REEALKENRRQQQPGSAESLKPTDAKAVGSSVTHIVDSFSRSVQLKEIE 1818 +EE ++ +Q E + + + HI + KEI+ Sbjct: 94 KEEVNCQHHEEQNRQKQEHINTEEEAVHKEKIIHITEETETEAFKKEID 142
>P36594:RPB1_SCHPO DNA-directed RNA polymerase II subunit RPB1 - Schizosaccharomyces| pombe (Fission yeast) Length = 1752 Score = 32.3 bits (72), Expect = 8.8 Identities = 38/132 (28%), Positives = 51/132 (38%), Gaps = 2/132 (1%) Frame = +1 Query: 436 VYSGGYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANNPQMMYGAYSPVSTVGEGQS 615 V S GY +P Y ++ +SP SP Y + +YSP S S Sbjct: 1534 VQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSP----SYSPTS-----PS 1584 Query: 616 YSPMHFPFS--NPYYQPPASLSMGYSNSGTGMSQGDPMLQQEYFLPDGLLYSPTAVYRQP 789 YSP +S +P Y P S YS + S P + P YSPT+ P Sbjct: 1585 YSPTSPSYSPTSPSYSP---TSPSYSATSPSYSPTSPS-----YSPTSPSYSPTSPSYSP 1636 Query: 790 FGSYNRAATQPS 825 S + + T PS Sbjct: 1637 -TSPSYSPTSPS 1647
>P0C159:NU2C_SACHY NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Saccharum| hybrid (Sugarcane) Length = 510 Score = 32.3 bits (72), Expect = 8.8 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>P46619:NU2C_MAIZE NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Zea mays| (Maize) Length = 510 Score = 32.3 bits (72), Expect = 8.8 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>Q33532:NU2C_HORVU NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Hordeum vulgare| (Barley) Length = 510 Score = 32.3 bits (72), Expect = 8.8 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 7/81 (8%) Frame = -2 Query: 1101 LFLWFCSTWAAVLLVQK--LQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRSS 943 L+L++C A + + L +++L I +Y L+TG +I R+P+RS+ Sbjct: 418 LYLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSN 477 Query: 942 ASIFTSLLVCLVGSRIIHCSM 880 SI S+ VC++ S I+ SM Sbjct: 478 NSIELSMTVCVIASTILGISM 498
>Q1KXP7:NU2C_HELAN NAD(P)H-quinone oxidoreductase chain 2, chloroplast - Helianthus| annuus (Common sunflower) Length = 510 Score = 32.3 bits (72), Expect = 8.8 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 8/82 (9%) Frame = -2 Query: 1101 LFLWFCSTWAA---VLLVQKLQSTILDIEWYAPP---LLTGVAVKIIKSTTG--RTPIRS 946 L+L++C W A +L++ L ++++ I +Y L+TG +I R+P+RS Sbjct: 418 LYLFWCG-WQAGLYLLVLIGLLTSVVSIYYYLKIIKLLMTGRNQEITPHVRNYRRSPLRS 476 Query: 945 SASIFTSLLVCLVGSRIIHCSM 880 + SI S++VC++ S I SM Sbjct: 477 NNSIELSMIVCVIASTIPGISM 498
>Q8N5F7:NKAP_HUMAN NF-kappa-B-activating protein - Homo sapiens (Human)| Length = 415 Score = 32.3 bits (72), Expect = 8.8 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = -2 Query: 2235 SDEKATKTEQHSRHNASKTKREENKKEHRSK 2143 SD + +++ ++ A K K++E KK+HRSK Sbjct: 217 SDSETDSSDEDNKRRAKKAKKKEKKKKHRSK 247
>P08489:GLT4_WHEAT Glutenin, high molecular weight subunit PW212 precursor - Triticum| aestivum (Wheat) Length = 838 Score = 32.3 bits (72), Expect = 8.8 Identities = 51/219 (23%), Positives = 67/219 (30%), Gaps = 7/219 (3%) Frame = +1 Query: 400 YQPNVYAPQPQTVYSG-------GYINPSGQWEEYPYYVSMEGVHSASPSIMLSPGYANN 558 Y P+V +PQ + Y G G GQ ++ S +G P+ PG Sbjct: 111 YYPSVTSPQQVSYYPGQASPQRPGQGQQPGQGQQ-----SGQGQQGYYPTSPQQPGQWQQ 165 Query: 559 PQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTGMSQGDPMLQQEY 738 P+ Y P S GQ QP G G QG P Sbjct: 166 PEQGQPGYYPTSPQQPGQ------------LQQPAQGQQPGQGQQGRQPGQGQPG----- 208 Query: 739 FLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQHGTMYNSGSYKAH 918 Y PT+ QP A Q G QG P G G + Sbjct: 209 -------YYPTSSQLQPGQLQQPAQGQQGQQPGQGQQGQQP-------GQGQQPGQGQQG 254 Query: 919 QQASKYGGTTPNWGSAGRRFNNFDCNSSQQRGSIPFNIQ 1035 QQ + G P G G++ Q+G P ++Q Sbjct: 255 QQPGQ--GQQPGQGQQGQQL------GQGQQGYYPTSLQ 285 Score = 32.3 bits (72), Expect = 8.8 Identities = 53/210 (25%), Positives = 66/210 (31%) Frame = +1 Query: 343 KGAQEKANFLGKGGEQPYVYQPNVYAPQPQTVYSGGYINPSGQWEEYPYYVSMEGVHSAS 522 +G Q + G+ G+QP QP Y PQ G GQW++ +G Sbjct: 478 QGQQGQQPGQGQQGQQPGQGQPGYYPTSPQ---QSGQGQQPGQWQQ-----PGQGQPGYY 529 Query: 523 PSIMLSPGYANNPQMMYGAYSPVSTVGEGQSYSPMHFPFSNPYYQPPASLSMGYSNSGTG 702 P+ L PG Q Y SP G+GQ + P Q A G + Sbjct: 530 PTSPLQPGQG---QPGYDPTSP-QQPGQGQQPGQLQQPAQGQQGQQLAQGQQGQQPAQVQ 585 Query: 703 MSQGDPMLQQEYFLPDGLLYSPTAVYRQPFGSYNRAATQPSNASGLFGQGNAPLAFGMQH 882 Q QQ L G +QP A Q G QG P G Q Sbjct: 586 QGQQPAQGQQGQQLGQG------QQGQQPGQGQQPAQGQQGQQPGQGQQGQQP-GQGQQP 638 Query: 883 GTMYNSGSYKAHQQASKYGGTTPNWGSAGR 972 G Y Q S G W G+ Sbjct: 639 G-QGQPWYYPTSPQESGQGQQPGQWQQPGQ 667 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.316 0.131 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 428,494,854 Number of extensions: 10150226 Number of successful extensions: 29272 Number of sequences better than 10.0: 65 Number of HSP's gapped: 29215 Number of HSP's successfully gapped: 70 Length of query: 760 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 639 Effective length of database: 67,496,744 Effective search space: 43130419416 Effective search space used: 43130419416 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
