ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9UKV3:ACINU_HUMAN Apoptotic chromatin condensation inducer in t... 37 0.063
2P35824:SLAP_BACCI S-layer-related protein precursor - Bacillus c... 35 0.14
3Q9Y6Q6:TNR11_HUMAN Tumor necrosis factor receptor superfamily me... 34 0.41
4Q8NCN4:RN169_HUMAN RING finger protein 169 - Homo sapiens (Human) 33 0.91
5Q9JIX8:ACINU_MOUSE Apoptotic chromatin condensation inducer in t... 32 2.0
6O60383:GDF9_HUMAN Growth/differentiation factor 9 precursor - Ho... 31 2.7
7Q52892:NOEA_RHIME Nodulation protein noeA - Rhizobium meliloti (... 31 3.5
8Q95120:DMP1_BOVIN Dentin matrix acidic phosphoprotein 1 precurso... 31 3.5
9P97287:MCL1_MOUSE Induced myeloid leukemia cell differentiation ... 30 4.5
10P55200:HRX_MOUSE Zinc finger protein HRX - Mus musculus (Mouse) 30 4.5
11Q8LJT8:TKI1_ARATH TSL-kinase interacting protein 1 - Arabidopsis... 30 5.9
12O55176:PJA1_MOUSE E3 ubiquitin-protein ligase Praja1 - Mus muscu... 30 5.9
13Q8K394:PLCL2_MOUSE Inactive phospholipase C-like protein 2 - Mus... 30 7.7

>Q9UKV3:ACINU_HUMAN Apoptotic chromatin condensation inducer in the nucleus - Homo|
           sapiens (Human)
          Length = 1341
 Score = 36.6 bits (83), Expect = 0.063
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
 Frame = -1

Query: 371 SHTHTWCPGHGRWVSTRPFFLCIAIMPWRSTS--------RRLGTHKQ*AGGPVHLRVVP 216
           S+T T  P  G+ V+T P        P   TS        RRL   +  A   V  R+ P
Sbjct: 667 SYTETKDPSSGQEVATPPVPQLQVCEPKERTSTSSSSVQARRLSQPES-AEKHVTQRLQP 725

Query: 215 G-GQPSQPELEKRRPPAATAPWSESVRASTMTMVATLHIFVEEK 87
             G P + E E+  PPAAT P +   + S +     +H  VEEK
Sbjct: 726 ERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESERIHHTVEEK 769



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>P35824:SLAP_BACCI S-layer-related protein precursor - Bacillus circulans|
          Length = 1616

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = -3

Query: 273  ETWYAQAMSRRTSASPCRAGRTTVPTGVGEEAATGGNGALERERQGQHHDDGGDTTHLCG 94
            + WYA A++RR+  +  R     VPT  G +  T    A  R   G+ + DGG+    C 
Sbjct: 1509 DAWYAGAVARRSGPARGRFRNRGVPTRRGADTRTDERDAHARREAGR-YPDGGELRCRCA 1567

Query: 93   GEEHG 79
            G   G
Sbjct: 1568 GALRG 1572



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>Q9Y6Q6:TNR11_HUMAN Tumor necrosis factor receptor superfamily member 11A precursor -|
           Homo sapiens (Human)
          Length = 616

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +3

Query: 57  EVCDGLGS-HVLLLHKDV*CRHHRHGAGPDALAPGRRCRRWPPLLQLRLGRLSARHDTEM 233
           E   GLG+ H L L+KD  C+    G   DA +   +CR W       LG+    H TE 
Sbjct: 132 ECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNC--TFLGKRVEHHGTEK 189

Query: 234 HWSACSLLVRTKSP 275
             + CS  +  + P
Sbjct: 190 SDAVCSSSLPARKP 203



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>Q8NCN4:RN169_HUMAN RING finger protein 169 - Homo sapiens (Human)|
          Length = 708

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 141 DALAPG-RRCRRWPPLLQLRLGRLSARHDTEMHWSACSLLVRTKSPTRGSPRHDGDAQEE 317
           DA  PG  RCR   P    R  R   + D+E+    C+   R   P R  PR DG A   
Sbjct: 97  DAAGPGCPRCRARGPGWARRRARDDGQADSEV-LGECA---RRSQPERCRPRRDGGAAAA 152

Query: 318 G--PGADPAAVPGTP 356
           G  P  +P A P  P
Sbjct: 153 GPRPEQEPRAAPAEP 167



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>Q9JIX8:ACINU_MOUSE Apoptotic chromatin condensation inducer in the nucleus - Mus|
           musculus (Mouse)
          Length = 1338

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 212 GQPSQPELEKRRPPAATAPWSESVRASTMTMVATLHIFVEEK 87
           G P + E E+  PPAAT P +   + S +      H  VEEK
Sbjct: 728 GSPKKCEAEEAEPPAATQPQTSETQISHLLESERTHHTVEEK 769



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>O60383:GDF9_HUMAN Growth/differentiation factor 9 precursor - Homo sapiens (Human)|
          Length = 454

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -3

Query: 270 TWYAQAMSRRTSASPCRAGRTTVPTGVGEEAATGGNGALERERQGQ 133
           +WY+    RR S  P +  R+     VGEEAA  G  +  R R+GQ
Sbjct: 277 SWYSLHYKRRPSQGPDQE-RSLSAYPVGEEAAEDGRSSHHRHRRGQ 321



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>Q52892:NOEA_RHIME Nodulation protein noeA - Rhizobium meliloti (Sinorhizobium|
           meliloti)
          Length = 476

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 153 ERERQGQHHDDGGDTTHLCGGEEHGCLARHTPLSKVILWI 34
           ERERQG       D       E H  +A + PL++V+ W+
Sbjct: 369 ERERQGFSSRFSADAVLALAFEHHLAIAHNVPLAEVVAWV 408



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>Q95120:DMP1_BOVIN Dentin matrix acidic phosphoprotein 1 precursor - Bos taurus|
           (Bovine)
          Length = 510

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -3

Query: 249 SRRTSASPCRAGRTTVPTG-VGEEAATGGNGALERERQGQHHDDGGDTTHLCGGEEH 82
           S   SA   R+   + P G  G    T  +  L+RE +G    +GGD+T     EEH
Sbjct: 136 SDEDSADTTRSREDSTPQGDEGARDTTSESRDLDREDEGNSRPEGGDSTPDSDSEEH 192



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>P97287:MCL1_MOUSE Induced myeloid leukemia cell differentiation protein Mcl-1 homolog|
           - Mus musculus (Mouse)
          Length = 331

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/80 (27%), Positives = 33/80 (41%)
 Frame = +3

Query: 123 RHGAGPDALAPGRRCRRWPPLLQLRLGRLSARHDTEMHWSACSLLVRTKSPTRGSPRHDG 302
           R G G  AL PG R    PP +      ++A  +  +H S   L V  +     +     
Sbjct: 42  REGGGEAALLPGARVVARPPPVGAEDPDVTASAERRLHKSPGLLAVPPEEMAASAAAAIV 101

Query: 303 DAQEEGPGADPAAVPGTPSV 362
             +EE  G +P A+   P+V
Sbjct: 102 SPEEELDGCEPEAIGKRPAV 121



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>P55200:HRX_MOUSE Zinc finger protein HRX - Mus musculus (Mouse)|
          Length = 3966

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 206  PSQPELEKRRPPAATAPWSESVRASTMTMVATL 108
            P+ P LEK R P  +AP S +V+ ST ++ + L
Sbjct: 975  PAAPSLEKERTPCLSAPSSSTVKHSTSSIGSML 1007



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>Q8LJT8:TKI1_ARATH TSL-kinase interacting protein 1 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 743

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 249 SLLVRTKSPTRGS--PRHDGDAQEEGPGADPAAV--PGTPSVGVRD 374
           S LV   S   GS  P  DGD  EEGP ADP  +  PG    G+ D
Sbjct: 638 SQLVEASSGDEGSYNPHDDGDPMEEGP-ADPHTMDSPGKTPCGLAD 682



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>O55176:PJA1_MOUSE E3 ubiquitin-protein ligase Praja1 - Mus musculus (Mouse)|
          Length = 578

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -3

Query: 261 AQAMSRRTSASPCRAGRTTVPTGVGEEAATGGNGALERERQGQHHDDGGDTTHLCGGEEH 82
           A+  +RR   S       +  +     AA  GN +LERERQ            +CGG E+
Sbjct: 141 ARCSARRAELSKQNGSSASQISSAEGRAAAKGNNSLERERQNLPARPSRAPVSICGGGEN 200



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>Q8K394:PLCL2_MOUSE Inactive phospholipase C-like protein 2 - Mus musculus (Mouse)|
          Length = 1128

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 20/61 (32%), Positives = 25/61 (40%)
 Frame = -3

Query: 240 TSASPCRAGRTTVPTGVGEEAATGGNGALERERQGQHHDDGGDTTHLCGGEEHGCLARHT 61
           TS SP    +  +  G GE    GG G L   R    +D GG +   C     G  AR +
Sbjct: 15  TSPSPALGAKGALKAGAGEGGGGGGGGRLGHGR--ARYDSGGVSNGDCSLGVSGDEARTS 72

Query: 60  P 58
           P
Sbjct: 73  P 73


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 102,889,606
Number of extensions: 2378145
Number of successful extensions: 6648
Number of sequences better than 10.0: 13
Number of HSP's gapped: 6639
Number of HSP's successfully gapped: 13
Length of query: 189
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 82
Effective length of database: 71,336,874
Effective search space: 5849623668
Effective search space used: 5849623668
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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