ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf53o01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071031:Os05g0356700 | 30 | 2.2 | 2 | Os05g0418800:Os05g0418800 | 29 | 4.8 | 3 | AK105170:Os04g0643600 | 29 | 6.3 | 4 | AK103066:Os03g0737800 | 29 | 6.3 | 5 | Os06g0530300:Os06g0530300 | 28 | 8.2 | 6 | AK105551:Os01g0614300 | 28 | 8.2 | 7 | AK099139:Os03g0291800 | 28 | 8.2 | 8 | AK073263:Os07g0498900 | 28 | 8.2 | 9 | AK071479:Os03g0817900 | 28 | 8.2 | 10 | AK070365:Os03g0291800 | 28 | 8.2 | 11 | AK064880:Os03g0291800 | 28 | 8.2 | 12 | AK060829:Os03g0291800 | 28 | 8.2 |
|---|
>AK071031:Os05g0356700 | Length = 454 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 KTY C C PGL DTW+ LL Sbjct: 426 KTYADCVHWCLPGLQDTWNELL 447 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 652 KTYDTCYLTCWPGLSDTW 599 KTY C C PGL DTW Sbjct: 426 KTYADCVHWCLPGLQDTW 443
>Os05g0418800:Os05g0418800 | Length = 417 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 1/53 (1%) Frame = -3 Query: 290 HRTNPKANAAQYACT*RVGDEEEHEQENTAASLQSCAQHP-PSVRSTCMILLH 135 H P N + + E+H NTAA L +C P PS ST H Sbjct: 199 HHQRPAGNVQASSSSAAARPPEQHSGNNTAAGLPACRHRPSPSSSSTTTAQQH 251
>AK105170:Os04g0643600 | Length = 252 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = -3 Query: 227 EEHEQENTAASLQSCAQHPPSVRSTCMILLHKHLDRPPNHRLGGAKEDRSRFAP 66 E+H +E AA+ QS + H PS+ +T + R + L G RSR +P Sbjct: 186 EQHRKEEEAANRQSSSSHHPSLAATI------YASRFAANALRGVHRLRSRASP 233
>AK103066:Os03g0737800 | Length = 759 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -2 Query: 144 PPPQTP*SATESPAWRRQGGPIP 76 PP QTP AT+ AWR G P P Sbjct: 15 PPLQTPARATKLRAWRPPGAPPP 37
>Os06g0530300:Os06g0530300 | Length = 311 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -2 Query: 180 STSSQRPIHLYDPPPQTP*SATESPAWRRQGGPIPVCSSLFLGLGGRRELWR 25 S+SS P PPP P S+ P+ RR+ + SSL L EL R Sbjct: 20 SSSSSPPTPTTIPPPPLPSSSWSPPSRRRRRRAVAAASSLHLAPEDIAELVR 71
>AK105551:Os01g0614300 | Length = 479 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%) Frame = -2 Query: 897 IKYSGKGLSAK------TYDTCYLTCGPGLSDTWSILL 802 I GK LS + Y C C PGL DTW++LL Sbjct: 430 ITREGKPLSTEQRQQPLVYADCSHWCLPGLPDTWNLLL 467
>AK099139:Os03g0291800 | Length = 574 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 KTY C C PGL DTW+ L Sbjct: 540 KTYADCIHWCLPGLPDTWNQFL 561 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 652 KTYDTCYLTCWPGLSDTW 599 KTY C C PGL DTW Sbjct: 540 KTYADCIHWCLPGLPDTW 557
>AK073263:Os07g0498900 | Length = 413 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILLA 799 K +D C C PG +DTW+ LLA Sbjct: 383 KKHDDCMHWCLPGPTDTWNDLLA 405
>AK071479:Os03g0817900 | Length = 441 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 K+Y C C PGL DTW+ LL Sbjct: 413 KSYADCTHWCLPGLQDTWNELL 434
>AK070365:Os03g0291800 | Length = 574 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 KTY C C PGL DTW+ L Sbjct: 540 KTYADCIHWCLPGLPDTWNQFL 561 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 652 KTYDTCYLTCWPGLSDTW 599 KTY C C PGL DTW Sbjct: 540 KTYADCIHWCLPGLPDTW 557
>AK064880:Os03g0291800 | Length = 433 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 KTY C C PGL DTW+ L Sbjct: 399 KTYADCIHWCLPGLPDTWNQFL 420 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 652 KTYDTCYLTCWPGLSDTW 599 KTY C C PGL DTW Sbjct: 399 KTYADCIHWCLPGLPDTW 416
>AK060829:Os03g0291800 | Length = 241 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = -2 Query: 867 KTYDTCYLTCGPGLSDTWSILL 802 KTY C C PGL DTW+ L Sbjct: 207 KTYADCIHWCLPGLPDTWNQFL 228 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 652 KTYDTCYLTCWPGLSDTW 599 KTY C C PGL DTW Sbjct: 207 KTYADCIHWCLPGLPDTW 224 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,334,009 Number of extensions: 704351 Number of successful extensions: 1905 Number of sequences better than 10.0: 12 Number of HSP's gapped: 1902 Number of HSP's successfully gapped: 17 Length of query: 347 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 246 Effective length of database: 11,355,714 Effective search space: 2793505644 Effective search space used: 2793505644 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
