ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56o06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK066433:Os03g0271400 | 131 | 5e-31 | 2 | AK101448:Os03g0822700 | 74 | 9e-14 | 3 | AK061682:Os03g0822700 | 74 | 9e-14 | 4 | Os11g0564900:Os11g0564900 | 29 | 2.6 | 5 | AK101771:Os01g0716800 | 29 | 2.6 | 6 | AK101741:Os01g0716800 | 29 | 2.6 | 7 | Os04g0562500:Os04g0562500 | 29 | 3.4 | 8 | AK107357: | 29 | 3.4 | 9 | AK099941:Os04g0588700 | 28 | 4.4 | 10 | AK070332:Os01g0108600 | 28 | 5.7 | 11 | Os04g0565400:Os04g0565400 | 28 | 7.5 | 12 | AK100337:Os01g0851100 | 28 | 7.5 | 13 | Os01g0884700:Os01g0884700 | 27 | 9.7 |
|---|
>AK066433:Os03g0271400 | Length = 384 Score = 131 bits (329), Expect = 5e-31 Identities = 64/78 (82%), Positives = 68/78 (87%) Frame = +2 Query: 152 MAGDRMSWARLLKWSLSYMDGARPSRDISEEERRWLAEAVERHMAEDVVGRLREIVLLMR 331 MAGDR+SW+ LLKWSLSY DG RPSR ISEEERRWLAEAVERHM DVV R+REI LLM Sbjct: 1 MAGDRLSWSGLLKWSLSYADGTRPSRAISEEERRWLAEAVERHMMVDVVSRMREIALLMS 60 Query: 332 TPLSVLEAQGITPEDIEG 385 TPLSVLEA GITP+DIEG Sbjct: 61 TPLSVLEAHGITPDDIEG 78
>AK101448:Os03g0822700 | Length = 379 Score = 73.9 bits (180), Expect = 9e-14 Identities = 35/75 (46%), Positives = 52/75 (69%) Frame = +2 Query: 158 GDRMSWARLLKWSLSYMDGARPSRDISEEERRWLAEAVERHMAEDVVGRLREIVLLMRTP 337 G W LLKWSL++ DG R +SEE+++W EA++ + DVV R++EI +M+TP Sbjct: 5 GGGPDWNGLLKWSLAHGDGTAKPRSLSEEDKKWFMEAMQAN-TMDVVKRMKEITQVMKTP 63 Query: 338 LSVLEAQGITPEDIE 382 VL++QG+TPE+IE Sbjct: 64 DDVLQSQGVTPENIE 78
>AK061682:Os03g0822700 | Length = 305 Score = 73.9 bits (180), Expect = 9e-14 Identities = 35/75 (46%), Positives = 52/75 (69%) Frame = +2 Query: 158 GDRMSWARLLKWSLSYMDGARPSRDISEEERRWLAEAVERHMAEDVVGRLREIVLLMRTP 337 G W LLKWSL++ DG R +SEE+++W EA++ + DVV R++EI +M+TP Sbjct: 5 GGGPDWNGLLKWSLAHGDGTAKPRSLSEEDKKWFMEAMQAN-TMDVVKRMKEITQVMKTP 63 Query: 338 LSVLEAQGITPEDIE 382 VL++QG+TPE+IE Sbjct: 64 DDVLQSQGVTPENIE 78
>Os11g0564900:Os11g0564900 | Length = 1234 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -1 Query: 608 LQNIQNAGNIPNCLICFT*IVHNHLDSNLFKDKIPD 501 L Q G IP+ + C +V+ +L SN K KIPD Sbjct: 1052 LSQNQLTGGIPDQVTCLDGLVNLNLSSNHLKGKIPD 1087
>AK101771:Os01g0716800 | Length = 486 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/56 (25%), Positives = 23/56 (41%) Frame = +1 Query: 73 TVARWWFRLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEPLLHGRRAAFSRHQR 240 TV R W + SP + + D G + G D+ + E + H R + +R Sbjct: 64 TVLRKWLNIRSPESDFSADEG-----EATGDDDTDSEFEYEEMCHWERQLYDEERR 114
>AK101741:Os01g0716800 | Length = 676 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/56 (25%), Positives = 23/56 (41%) Frame = +1 Query: 73 TVARWWFRLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEPLLHGRRAAFSRHQR 240 TV R W + SP + + D G + G D+ + E + H R + +R Sbjct: 64 TVLRKWLNIRSPESDFSADEG-----EATGDDDTDSEFEYEEMCHWERQLYDEERR 114
>Os04g0562500:Os04g0562500 | Length = 351 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +1 Query: 76 VARWWFRLASPAASWDCDSGAGEVRDGRGSD-ELGEAAQMEPLLHGRRAAFSRHQ 237 + RW R +A D G DG S +L ++M+P RRAAF RH+ Sbjct: 265 LVRWMSRAKRRSAKKQNDGGGD---DGESSTVQLRSESRMKPEEKARRAAFERHE 316
>AK107357: | Length = 734 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -3 Query: 525 SFQGQDSRHLASLLYHQLKLSNAR*YYQSTTIIALRMPPA 406 S Q Q S AS+ YH++K++ ++IALRMPP+ Sbjct: 643 STQPQTSGSAASVPYHRIKVARRN---DLDSVIALRMPPS 679
>AK099941:Os04g0588700 | Length = 1318 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = -2 Query: 601 IFRMLGTFLTASYVSPKLFITI*IPIFSRTRFQTSSILTLPSIKTLKCTVILPIDHHY 428 + + LGT L SYVS + I I R+Q LT + L PI HH+ Sbjct: 867 VMQFLGTILIISYVSWPVLIIFIPSILICIRYQRYYSLTATELARLSGIQKAPILHHF 924
>AK070332:Os01g0108600 | Length = 216 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 100 ASPAASWDCDSGAGEVRDGRGSDELGEAAQMEPLLHGRRAAFSRHQ 237 A+ WD G GE D G E G AA+ + GRR Q Sbjct: 121 AAAVPGWDAGRGGGERGDQGGEGEGGAAARGDRRAGGRRRGGGERQ 166
>Os04g0565400:Os04g0565400 | Length = 464 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 12/48 (25%) Frame = +1 Query: 127 DSGAGEVR------------DGRGSDELGEAAQMEPLLHGRRAAFSRH 234 D+G GE R +G G G A Q+E L HG AAF H Sbjct: 317 DTGEGETRHAKLLSEFSKQTEGTGMVITGWAPQLEILAHGATAAFMSH 364
>AK100337:Os01g0851100 | Length = 335 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 637 LLRGNHNVMDCRIFRMLGTFLTASY 563 L R HN++ + + +L TFL ASY Sbjct: 11 LFRKRHNILQSKSYELLVTFLQASY 35
>Os01g0884700:Os01g0884700 | Length = 212 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 85 WWFRLASPAASWDCDSGAGEVRDGRGSDELG 177 W L SP A+ ++ A E RDG G DE G Sbjct: 11 WELLLTSPTAA--DEAAAAETRDGGGDDEAG 39 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,511,802 Number of extensions: 327432 Number of successful extensions: 1041 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1039 Number of HSP's successfully gapped: 13 Length of query: 226 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 129 Effective length of database: 11,515,878 Effective search space: 1485548262 Effective search space used: 1485548262 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
