ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf56o06 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g16460:12003.t01429:unspliced-genomic expressed protein| Length = 3787 Score = 99.1 bits (210), Expect(2) = 3e-30 Identities = 42/50 (84%), Positives = 44/50 (88%) Frame = +2 / +1 Query: 236 SEEERRWLAEAVERHMAEDVVGRLREIVLLMRTPLSVLEAQGITPEDIEG 385 SEEERRWLAEAVERHM DVV R+REI LLM TPLSVLEA GITP+DIEG Sbjct: 403 SEEERRWLAEAVERHMMVDVVSRMREIALLMSTPLSVLEAHGITPDDIEG 552 Score = 57.4 bits (119), Expect(2) = 3e-30 Identities = 22/28 (78%), Positives = 24/28 (85%) Frame = +2 / +2 Query: 152 MAGDRMSWARLLKWSLSYMDGARPSRDI 235 MAGDR+SW+ LLKWSLSY DG RPSR I Sbjct: 155 MAGDRLSWSGLLKWSLSYADGTRPSRAI 238 Score = 57.9 bits (120), Expect(2) = 1e-13 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = -2 / -2 Query: 385 TFDVLGRDALRLQDGERGSHQQHDLPQAA 299 TFDV+G DA+RLQDGERG+H+Q DLP AA Sbjct: 552 TFDVVGGDAVRLQDGERGAHEQRDLPHAA 466 Score = 42.8 bits (87), Expect(2) = 1e-13 Identities = 19/26 (73%), Positives = 20/26 (76%) Frame = -3 / -2 Query: 225 EGRAPSM*ERLHLSSLAQLIRSPAIP 148 +GR PS *ERLH SS QL RSPAIP Sbjct: 228 DGRVPSA*ERLHFSSPDQLSRSPAIP 151 Score = 44.6 bits (91), Expect(2) = 2e-07 Identities = 20/26 (76%), Positives = 22/26 (84%) Frame = -3 / -3 Query: 357 CASRTESGVLISSTISLRRPTTSSAM 280 CASRTESGVL+SS ISL R TTS+ M Sbjct: 524 CASRTESGVLMSSAISLMRLTTSTIM 447 Score = 34.5 bits (69), Expect(2) = 2e-07 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -2 / -1 Query: 235 DVARRPRAVHVGEAPFEQ 182 D ARRPR V VGEAPF+Q Sbjct: 238 DGARRPRPVGVGEAPFQQ 185 Score = 43.2 bits (88), Expect = 0.002 Identities = 21/31 (67%), Positives = 22/31 (70%) Frame = +1 / +1 Query: 145 VRDGRGSDELGEAAQMEPLLHGRRAAFSRHQ 237 V DGR S EL AA+MEPLL R AA SRHQ Sbjct: 148 VGDGRRSAELVGAAEMEPLLRRRDAAVSRHQ 240
>LOC_Os03g60780:12003.t05315:unspliced-genomic armadillo/beta-catenin-like repeat family protein, expressed| Length = 3044 Score = 49.6 bits (102), Expect(3) = 4e-08 Identities = 19/32 (59%), Positives = 27/32 (84%) Frame = +2 / +2 Query: 290 DVVGRLREIVLLMRTPLSVLEAQGITPEDIEG 385 DVV R++EI +M+TP VL++QG+TPE+IEG Sbjct: 785 DVVKRMKEITQVMKTPDDVLQSQGVTPENIEG 880 Score = 28.6 bits (56), Expect(3) = 4e-08 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 / +2 Query: 158 GDRMSWARLLKWSLSYMDGARPSRDI 235 G W LLKWSL++ DG R + Sbjct: 230 GGGPDWNGLLKWSLAHGDGTAKPRSL 307 Score = 22.6 bits (43), Expect(3) = 4e-08 Identities = 7/20 (35%), Positives = 14/20 (70%) Frame = +2 / +2 Query: 236 SEEERRWLAEAVERHMAEDV 295 SEE+++W EA++ + + V Sbjct: 734 SEEDKKWFMEAMQANTMDVV 793
>LOC_Os12g30340:12012.t02741:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7354 Score = 37.3 bits (75), Expect = 0.11 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -1 / +2 Query: 479 IN*NSQMHGNTTNRPPLSPFACHRQVG 399 I+* S H T +RP +SPFAC +++G Sbjct: 1067 IH*TSYKHSRTVSRPEVSPFACFKKIG 1147
>LOC_Os06g31390:12006.t02840:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5995 Score = 32.2 bits (64), Expect(2) = 0.13 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 / +2 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R AS D+G G+ GR SDE GEAA P Sbjct: 572 RRASRGGGGGSDAGGGDGAAGRRSDEAGEAAGGRP 676 Score = 22.1 bits (42), Expect(2) = 0.13 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 661 GWRPAGNVGERGRRW 705
>LOC_Os05g19880:12005.t01751:unspliced-genomic conserved hypothetical protein| Length = 1820 Score = 30.9 bits (61), Expect(2) = 0.35 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 / +2 Query: 124 CDSGAGEVRDGRGSDELGEAAQMEP 198 CD+G G+ GR S E GEAA P Sbjct: 350 CDAGGGDGAAGRRSGEAGEAAGGRP 424 Score = 22.1 bits (42), Expect(2) = 0.35 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 409 GWRPAGNVGERGRRW 453
>LOC_Os05g17510:12005.t01520:unspliced-genomic conserved hypothetical protein| Length = 1820 Score = 30.9 bits (61), Expect(2) = 0.35 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 / +2 Query: 124 CDSGAGEVRDGRGSDELGEAAQMEP 198 CD+G G+ GR S E GEAA P Sbjct: 350 CDAGGGDGAAGRRSGEAGEAAGGRP 424 Score = 22.1 bits (42), Expect(2) = 0.35 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 409 GWRPAGNVGERGRRW 453
>LOC_Os04g42900:12004.t03836:unspliced-genomic expressed protein| Length = 3230 Score = 35.0 bits (70), Expect = 0.55 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 / +3 Query: 139 GEVRDGRGSDELGEAAQMEPLLHGRRAAF 225 G VRDG G+D G A ++PL+ RRA F Sbjct: 2823 GAVRDGGGADGGGGEAGLQPLVPARRAGF 2909
>LOC_Os03g35490:12003.t03037:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 864 Score = 27.6 bits (54), Expect(2) = 0.65 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +1 / +2 Query: 4 RKPTSERSPHRTALETRAQANRDTVARW 87 +K R PHR R + T+ARW Sbjct: 269 KKREGRRGPHRKRRPARRKMTATTIARW 352 Score = 26.7 bits (52), Expect(2) = 0.65 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 / +2 Query: 118 WDCDSGAGEVRDGRGSDELGEA 183 W C G G+ GRG+ GEA Sbjct: 530 WCCCGGTGKRSRGRGATRCGEA 595
>LOC_Os08g12020:12008.t01082:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 17259 Score = 34.5 bits (69), Expect = 0.76 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 / -2 Query: 353 AQGITPEDIEGTDQSSPPAGGMRRAIMVVDW 445 A G PE+ +G D+ +PP G RA DW Sbjct: 12128 ALGFRPEEDDGPDRWTPPVSGSGRARAAADW 12036
>LOC_Os01g46169:12001.t04066:unspliced-genomic carboxylic ester hydrolase/ hydrolase, acting on ester bonds, putative,| expressed Length = 24799 Score = 25.8 bits (50), Expect(2) = 1.3 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 / -2 Query: 320 LLMRTPLSVLEAQGITPEDIEGTDQSSPPA 409 LL+ TPL++L G +P SPPA Sbjct: 15849 LLLHTPLALLPFAGFSPLHYHCFPLPSPPA 15760 Score = 24.9 bits (48), Expect(2) = 1.3 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 / -2 Query: 193 EPLLHGRRAAFSRHQR 240 +PLLHGRR S H R Sbjct: 16008 DPLLHGRRHFSSLHGR 15961
>LOC_Os02g45310:12002.t04118:unspliced-genomic ankyrin protein kinase-like, putative, expressed| Length = 3795 Score = 33.6 bits (67), Expect = 1.4 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 / -2 Query: 127 DSGAGEVRDGRGSDELGEAAQMEPLLHGRRAAFSR 231 D AG VR G+ +GEA E HGR AA R Sbjct: 1964 DEAAGAVRHVEGAGRVGEAVGGEHADHGRHAALQR 1860
>LOC_Os09g38239:12009.t03296:unspliced-genomic flavonol sulfotransferase-like, putative, expressed| Length = 1501 Score = 27.6 bits (54), Expect(2) = 2.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 / -1 Query: 379 DVLGRDALRLQDGERGSHQQHDLPQAA 299 D +G L+ GER H+ LPQAA Sbjct: 949 DGVGHPGRLLRRGERAPHELRHLPQAA 869 Score = 25.8 bits (50), Expect(2) = 2.0 Identities = 11/29 (37%), Positives = 13/29 (44%) Frame = -2 / -3 Query: 490 LTLPSIKTLKCTVILPIDHHYRPSHATGR 404 L L L CT + + HY SH T R Sbjct: 1493 LNLTLFDLLNCTFYITNNSHYPSSHRTSR 1407
>LOC_Os09g23120:12009.t01996:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5753 Score = 33.1 bits (66), Expect = 2.0 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -1 / -1 Query: 128 SQSHDAAGEARRNHHRATVSRLACARVSSAVRCGERSL 15 S+S A + N HR+ R C+ S A+RC SL Sbjct: 713 SRSRSCAWRSSSNRHRSASCRTRCSSASRALRCSSVSL 600
>LOC_Os07g45620:12007.t04199:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10208 Score = 33.1 bits (66), Expect = 2.0 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +1 / +1 Query: 112 ASWDCDSGAGEVRDGRGSDELGEAAQMEPLLHGRRAAFSRH 234 ++W C + A VR G G + LG Q P RRA H Sbjct: 943 SAWPCAAAAETVRGGEGDERLGRMKQRWP*QS*RRAGSGPH 1065
>LOC_Os12g30880:12012.t02794:unspliced-genomic conserved hypothetical protein| Length = 2982 Score = 28.1 bits (55), Expect(2) = 2.0 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 / +2 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R A CD+ G+ GR S E GEAA P Sbjct: 359 RRAGRGGGGGCDARGGDGAAGRRSGEAGEAAGGRP 463 Score = 22.1 bits (42), Expect(2) = 2.0 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 448 GWRPAGNVGERGRRW 492
>LOC_Os04g06670:12004.t00546:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2949 Score = 28.1 bits (55), Expect(2) = 2.0 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 / +2 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R AS D+G G+ GR S E GEAA P Sbjct: 443 RRASRGGGGGGDAGGGDGAAGRRSGEAGEAAGGRP 547 Score = 22.1 bits (42), Expect(2) = 2.0 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 532 GWRPAGNVGERGRRW 576
>LOC_Os12g35140:12012.t03202:unspliced-genomic conserved hypothetical protein| Length = 2430 Score = 28.1 bits (55), Expect(2) = 2.0 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 / +2 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R AS D+G G+ GR S E GEAA P Sbjct: 605 RRASRGGGGGGDAGGGDGAAGRRSGEAGEAAGGRP 709 Score = 22.1 bits (42), Expect(2) = 2.0 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 694 GWRPAGNVGERGRRW 738
>LOC_Os04g06650:12004.t00544:unspliced-genomic hypothetical protein| Length = 1932 Score = 28.1 bits (55), Expect(2) = 2.1 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 / +2 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R AS D+G G+ GR S E GEAA P Sbjct: 443 RRASRGGGGGGDAGGGDGAAGRRSGEAGEAAGGRP 547 Score = 22.1 bits (42), Expect(2) = 2.1 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 532 GWRPAGNVGERGRRW 576
>LOC_Os06g38250:12006.t03520:unspliced-genomic conserved hypothetical protein| Length = 768 Score = 28.1 bits (55), Expect(2) = 2.2 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198 R AS D+G G+ GR S E GEAA P Sbjct: 427 RRASRGGGGGGDAGGGDGAAGRRSGEAGEAAGGRP 531 Score = 22.1 bits (42), Expect(2) = 2.2 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +3 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 516 GWRPAGNVGERGRRW 560
>LOC_Os10g41240:12010.t03360:unspliced-genomic protein-tyrosine phosphatase mitochondrial 1, mitochondrial| precursor, putative, expressed Length = 4003 Score = 32.7 bits (65), Expect = 2.7 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 / +2 Query: 85 WWFRLASPAASWDCDSGAGEVRDGRGSDELG 177 WW R A+ AASW G G G G D G Sbjct: 377 WWRRGAAAAASWGGGGGGGGGGGGWGGDACG 469
>LOC_Os10g40324:12010.t03275:unspliced-genomic conserved hypothetical protein| Length = 11389 Score = 32.7 bits (65), Expect = 2.7 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 / -1 Query: 22 RSPHRTALETRAQANRDTVARWWFRLASPA 111 R HR A++ R A R +V+RW R SPA Sbjct: 10891 RHLHRQAVQPRRAARRSSVSRWLRRRRSPA 10802
>LOC_Os08g33370:12008.t03078:unspliced-genomic 14-3-3-like protein, putative, expressed| Length = 3130 Score = 32.7 bits (65), Expect = 2.7 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 / +2 Query: 678 FFFLRIRITIYLFIYCGGITML 613 F +L I + IYLFIYCG + M+ Sbjct: 437 FIYLFIYLFIYLFIYCGSMLMV 502
>LOC_Os07g09480:12007.t00822:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed| Length = 1964 Score = 32.7 bits (65), Expect = 2.7 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +1 / +2 Query: 13 TSERSPHRTALETRAQANRDTVARWWFRLASPAASWDCDS 132 TS R A + + + T +R W R +S AA+W C S Sbjct: 1163 TSSTGSGRRAAASASSCSPPTTSRSWTRRSSAAAAWTCTS 1282
>LOC_Os12g33810:12012.t03070:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2415 Score = 27.2 bits (53), Expect(2) = 3.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 / +2 Query: 124 CDSGAGEVRDGRGSDELGEAAQMEP 198 CD+ G+ GR S E GEAA P Sbjct: 641 CDARGGDGAAGRRSGEAGEAAGGRP 715 Score = 22.1 bits (42), Expect(2) = 3.7 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +1 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 700 GWRPAGNVGERGRRW 744
>LOC_Os11g42650:12011.t03795:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 13740 Score = 32.2 bits (64), Expect = 3.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 / -2 Query: 353 AQGITPEDIEGTDQSSPPAGGMRRAIMVVDW 445 A G PE+ +G D+ +PP G A DW Sbjct: 12536 ALGFQPEEDDGPDKWTPPVSGSEGARAAADW 12444 Score = 32.2 bits (64), Expect = 3.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 / -2 Query: 353 AQGITPEDIEGTDQSSPPAGGMRRAIMVVDW 445 A G PE+ +G D+ +PP G A DW Sbjct: 3545 ALGFRPEEDDGPDKWTPPVSGSEGARAAADW 3453
>LOC_Os11g06700:12011.t00562:unspliced-genomic protein binding protein, putative, expressed| Length = 2256 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1 / -2 Query: 7 KPTSERSPHRTALETRAQANRDTVARWWFRLASPAASWDCDSGA 138 +PT+ P T + A R T+ WW L A S DS A Sbjct: 1022 RPTAASQPANTRAQRSCSAERPTLMVWWNALIHVATSDSSDSHA 891
>LOC_Os06g36630:12006.t03358:unspliced-genomic conserved hypothetical protein| Length = 693 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 549 RRASRGRGGSCDAGGGDGATGRRSGEEGEAA 641
>LOC_Os06g09230:12006.t00802:unspliced-genomic serine threonine kinase, putative, expressed| Length = 4511 Score = 32.2 bits (64), Expect = 3.7 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 / +1 Query: 13 TSERSPHRTALETRAQANRDTVARWWFRLASPAASW 120 T+ RSP R + TR + R + RW AS +W Sbjct: 2614 TTRRSPSRCSAPTRRRGGRSSSKRWRCSAASATRTW 2721
>LOC_Os03g39284:12003.t03366:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10798 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 447 RRASRGRGGSCDAGGGDGATGRRSGEEGEAA 539
>LOC_Os03g33920:12003.t02981:unspliced-genomic conserved hypothetical protein| Length = 693 Score = 32.2 bits (64), Expect = 3.7 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +3 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 549 RRASRGRGGSCDAGGGDGATGRRSGEEGEAA 641
>LOC_Os03g17634:12003.t01536:unspliced-genomic expressed protein| Length = 24778 Score = 25.8 bits (50), Expect(2) = 4.1 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 364 DALRLQDGERGSHQQHDLPQAA 299 D R QD G+H+QH QAA Sbjct: 15835 DPFRRQDDPLGAHRQHRHVQAA 15770 Score = 23.1 bits (44), Expect(2) = 4.1 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -1 / -1 Query: 470 NSQMHGNTTNRPP 432 +SQ+HG+ RPP Sbjct: 15880 HSQLHGSRLGRPP 15842
>LOC_Os01g47880:12001.t04234:unspliced-genomic hypothetical protein| Length = 1551 Score = 27.6 bits (54), Expect(2) = 4.9 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +1 / +2 Query: 7 KPTSERSPHRTALETRAQANRDTVARW 87 K R PHR TR + T+A+W Sbjct: 161 KKEGRRDPHRKRRPTRRKRTATTIAQW 241 Score = 24.4 bits (47), Expect(2) = 4.9 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +1 / +3 Query: 118 WDCDSGAGEVRDGRGSDELGEA 183 W G GE+R GR S GEA Sbjct: 555 WCSRGGEGEIRGGRTSPCGGEA 620
>LOC_Os08g24110:12008.t02181:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1877 Score = 26.7 bits (52), Expect(2) = 5.0 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 / +3 Query: 127 DSGAGEVRDGRGSDELGEAAQMEP 198 D+G G+ GR S E GEAA P Sbjct: 450 DAGGGDGAAGRRSGEAGEAAGGRP 521 Score = 22.1 bits (42), Expect(2) = 5.0 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +2 / +2 Query: 212 GARPSRDISEEERRW 256 G RP+ ++ E RRW Sbjct: 506 GWRPAGNVGERGRRW 550
>LOC_Os11g11240:12011.t01011:unspliced-genomic expressed protein| Length = 8186 Score = 31.8 bits (63), Expect = 5.1 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -1 / +1 Query: 677 FFFCEYESQFIYLFIAGESQCYGLQNIQNAGNIPNCLIC 561 +F C Y +F+ L ++ + G + G +P CLIC Sbjct: 1708 YFICHYSRRFVQLTMSMNAYM*GKNYLLVVG*LPPCLIC 1824
>LOC_Os09g12450:12009.t01035:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os09g09030:12009.t00697:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os09g09010:12009.t00695:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os07g24730:12007.t02169:unspliced-genomic ligA, putative| Length = 657 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os07g24710:12007.t02167:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os01g29030:12001.t02593:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.8 bits (63), Expect = 5.1 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +1 / +1 Query: 94 RLASPAASWDCDSGAGEVRDGRGSDELGEAA 186 R AS CD+G G+ GR S E GEAA Sbjct: 253 RRASRGRGGHCDAGGGDGATGRRSGEEGEAA 345
>LOC_Os06g20730:12006.t01890:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3247 Score = 28.6 bits (56), Expect(2) = 5.2 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +1 / +3 Query: 1 KRKPTSERSPHRTALETRAQANRDTVARW 87 + K R PHR TR + T+A+W Sbjct: 153 REKKEGRRDPHRKRRPTRRKRTATTIAQW 239 Score = 24.4 bits (47), Expect(2) = 5.2 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +1 / +3 Query: 118 WDCDSGAGEVRDGRGSDELGEA 183 W G GE+R GR S GEA Sbjct: 552 WCSRGGEGEIRGGRTSPCGGEA 617
>LOC_Os01g41420:12001.t03662:unspliced-genomic amino acid permease, putative, expressed| Length = 3763 Score = 29.0 bits (57), Expect(2) = 5.9 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 79 ARWWFRLASPAASWDCDSGA 138 ARWW+R P+++ C S A Sbjct: 1124 ARWWWRRRCPSSATSCHSSA 1183 Score = 24.0 bits (46), Expect(2) = 5.9 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +2 / +1 Query: 377 IEGTDQSSPPAGGMRR 424 ++GTD+SSPP R+ Sbjct: 2275 VKGTDKSSPPTSPNRQ 2322
>LOC_Os07g36060:12007.t03278:unspliced-genomic strictosidine synthase 1 precursor, putative| Length = 1056 Score = 31.3 bits (62), Expect = 7.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +1 / +2 Query: 13 TSERSPHRTALETRAQANRDTVARWWFRLASPAAS 117 TS RSP R+ T A+A+ D RW A+P A+ Sbjct: 509 TSTRSPARSTSPTAARASSDPSTRWSRPPATPRAA 613
>LOC_Os07g35970:12007.t03269:unspliced-genomic strictosidine synthase 1 precursor, putative, expressed| Length = 1433 Score = 31.3 bits (62), Expect = 7.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +1 / +2 Query: 13 TSERSPHRTALETRAQANRDTVARWWFRLASPAAS 117 TS RSP R+ T A+A+ D RW A+P A+ Sbjct: 509 TSTRSPARSTSPTAARASSDPSTRWSRPPATPRAA 613
>LOC_Os03g10260:12003.t00828:unspliced-genomic expressed protein| Length = 1440 Score = 31.3 bits (62), Expect = 7.0 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 / -3 Query: 82 RWWFRLASPAASWDCDSGAGEVRDGRGSDELGEA 183 RW F A A W+ + G RDG E GE+ Sbjct: 1393 RWLFPTALRAKKWNTNCSWGSNRDGHSETERGES 1292
>LOC_Os03g31400:12003.t02736:unspliced-genomic ubiquitin conjugation factor E4 A, putative, expressed| Length = 7118 Score = 24.9 bits (48), Expect(2) = 8.1 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = -1 / +3 Query: 671 FCEYESQFIYLFIAGESQCY 612 FC+++S +YL I S C+ Sbjct: 4122 FCDWQSLVVYL*ICS*SSCF 4181 Score = 23.1 bits (44), Expect(2) = 8.1 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 / +1 Query: 529 PIFSRTRFQTSSILTLPSIKTLK 461 P+ R F TSS+ + ++ TLK Sbjct: 4174 PVSDRMTFSTSSLCSWRALHTLK 4242
>LOC_Os08g02150:12008.t00112:unspliced-genomic expressed protein| Length = 1348 Score = 30.9 bits (61), Expect = 9.7 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +1 / -1 Query: 88 WFRLASPAASWDCDSGAGEVRDGRG 162 W R AS SW C G G R GRG Sbjct: 346 WRRGASRGGSWRCRGGRGGRRAGRG 272
>LOC_Os05g39310:12005.t03473:unspliced-genomic pyruvate decarboxylase isozyme 1, putative, expressed| Length = 2912 Score = 30.9 bits (61), Expect = 9.7 Identities = 21/68 (30%), Positives = 27/68 (39%) Frame = +1 / +3 Query: 10 PTSERSPHRTALETRAQANRDTVARWWFRLASPAASWDCDSGAGEVRDGRGSDELGEAAQ 189 P S R L + A A +V+R W RL A + D GAG V D E Sbjct: 1851 PASATEASRCVLCSSAAAAISSVSRQWRRLC*CACARYTDDGAGRVDDAAVRAEEHHLPH 2030 Query: 190 MEPLLHGR 213 + +H R Sbjct: 2031 QQRRVHHR 2054
>LOC_Os04g35260:12004.t03197:unspliced-genomic ATP binding protein, putative, expressed| Length = 16921 Score = 30.9 bits (61), Expect = 9.7 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 / +3 Query: 680 FFFFCEYESQFIYLFIA 630 FFFFC Y QF+ LF A Sbjct: 6444 FFFFCLYSFQFVILFTA 6494
>LOC_Os04g32110:12004.t02890:unspliced-genomic ACR4, putative, expressed| Length = 2128 Score = 30.9 bits (61), Expect = 9.7 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 / +1 Query: 10 PTSERSPHRTALETRAQANRDTVARWWFRLASP 108 PTS S RTA + A +R + AR W R SP Sbjct: 1432 PTSPASSARTASPSAAPRSRRSAARPWTRSTSP 1530 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 224,129,275 Number of extensions: 3086065 Number of successful extensions: 15086 Number of sequences better than 10.0: 50 Length of query: 226 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 177 Effective length of database: 52,856,264 Effective search space: 9355558728 Effective search space used: 9355558728 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
