ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf56o06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8WXG9:GPR98_HUMAN G-protein coupled receptor 98 precursor - Hom... 33 1.3
2Q4R588:HPBP1_MACFA Hsp70-binding protein 1 - Macaca fascicularis... 27 2.6
3P55588:Y4OC_RHISN Uncharacterized protein y4oC - Rhizobium sp. (... 30 8.4
4Q0RHR9:UPPP3_FRAAA Undecaprenyl-diphosphatase 3 - Frankia alni (... 30 8.4

>Q8WXG9:GPR98_HUMAN G-protein coupled receptor 98 precursor - Homo sapiens (Human)|
          Length = 6307
 Score = 32.7 bits (73), Expect = 1.3
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 665 EYESQFIYLFIAGESQCYGLQNIQNAGNIPNCLICFT*IVH-NHLDSNLFKDKIPDI 498
           EYE    Y    G S  +  QN+      PN  + F   +H +HL   +  D IP+I
Sbjct: 298 EYEVSISYAVTTGNSTAHAQQNLDFIDLQPNTTVVFPPFIHESHLKFQIVDDTIPEI 354



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>Q4R588:HPBP1_MACFA Hsp70-binding protein 1 - Macaca fascicularis (Crab eating macaque)|
           (Cynomolgus monkey)
          Length = 364

 Score = 26.6 bits (57), Expect(2) = 2.6
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +1

Query: 97  LASPAASWDCDSGAGEVRDGRGSDELGEAAQMEP 198
           LA P AS  C SG G    G GS   G +    P
Sbjct: 13  LALPPASQGCSSGGGGGGGGGGSSSAGGSGNPRP 46



 Score = 23.9 bits (50), Expect(2) = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 221 PSRDISEEERRWLAEAV 271
           P   +SEE R+WL EA+
Sbjct: 68  PPEPMSEERRQWLQEAM 84



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>P55588:Y4OC_RHISN Uncharacterized protein y4oC - Rhizobium sp. (strain NGR234)|
          Length = 230

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 16/71 (22%)
 Frame = +2

Query: 179 RLLKWSLS-----------YMDGARPSRDISEEERRWLAEAVERHMAEDVVGRLREIVL- 322
           RL  W+L+           + DG+RP+ +++++ +  LA +VER  A   + R +E  + 
Sbjct: 64  RLQNWNLAPFKYLNPEGIRFFDGSRPALELADDRQTALAMSVERRQA--FLSRTKEAPIG 121

Query: 323 ----LMRTPLS 343
               L++TP+S
Sbjct: 122 LDMRLLKTPVS 132



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>Q0RHR9:UPPP3_FRAAA Undecaprenyl-diphosphatase 3 - Frankia alni (strain ACN14a)|
          Length = 297

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 227 RDISEEERRWLAEAVERHMAEDVVGRLREIVLLMRTPLSVLEAQGITPED-IEG 385
           RDI+   R W      R M +D   R+  +VLL   P+ +L   G+T +D IEG
Sbjct: 61  RDIARIVRAWALSWTRREMRKDTDARVGWLVLLGTIPIGLL---GVTLQDAIEG 111


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 98,377,956
Number of extensions: 1879371
Number of successful extensions: 5030
Number of sequences better than 10.0: 4
Number of HSP's gapped: 5030
Number of HSP's successfully gapped: 5
Length of query: 226
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 117
Effective length of database: 70,788,284
Effective search space: 8282229228
Effective search space used: 8282229228
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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