ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53n17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073965:Os01g0920400 360 e-99
2AK105435:Os04g0381000 199 2e-51
3AK111167: 83 3e-16
4AK073186:Os10g0567800 39 0.004
5AK061703:Os10g0567800 39 0.004
6AK110493: 39 0.005
7AK069270:Os09g0572900 35 0.056
8AK110298: 35 0.096
9AK073937:Os04g0592400 34 0.13
10Os03g0713100:Os03g0713100 34 0.16
11AK065908:Os05g0556100 33 0.21
12AK103885:Os02g0762200 33 0.36
13AK072230:Os01g0681100 33 0.36
14AK069661:Os04g0544900 30 2.4
15Os04g0201200:Os04g0201200 29 4.0
16AK110062: 29 5.3
17AK099483:Os04g0467800 29 5.3
18AK066731:Os08g0518100 29 5.3
19AK066492:Os08g0518100 29 5.3
20D87260:Os04g0194600 28 6.9
21AK100180:Os04g0194600 28 6.9
22Os06g0115600:Os06g0115600 28 9.0
23Os01g0722300:Os01g0722300 28 9.0
24AK110399: 28 9.0
25AK121879:Os09g0502200 28 9.0
26AK102600:Os09g0502200 28 9.0
27AK101611:Os04g0592700 28 9.0

>AK073965:Os01g0920400 |
          Length = 818
 Score =  360 bits (923), Expect = e-99
 Identities = 194/267 (72%), Positives = 217/267 (81%), Gaps = 11/267 (4%)
 Frame = +3

Query: 6    QASEKTQKARALLGRTTGVNGVITDQIQGVRSAAEAERPXXXXXXXXXXXXXXXXXX--- 176
            QAS+KTQK RALLGRT GVNGV+TD +QG+R AAEAERP                     
Sbjct: 554  QASDKTQKPRALLGRT-GVNGVVTDHLQGLRPAAEAERPGSSGSGSTSFWGSISIFSSTS 612

Query: 177  EDRAPSSARGSSTNKSYASATPNLEHSFSSIQLKEPPLVLKPSENHSEQEDLEIAITKLL 356
            +DR  SSA+ +S+NKSY ++T +LEHS S+IQL+EPP+VLKPSE+ SEQE LEIAITKLL
Sbjct: 613  DDRTHSSAKDNSSNKSYTASTSHLEHSLSTIQLREPPVVLKPSESQSEQEALEIAITKLL 672

Query: 357  LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREELFGDILREPDEITTKR 536
            L+SYYNIVRKNVEDFVPKAIMHFLVNHTKRELHN+LIT LYR++LF D+LREPDEIT KR
Sbjct: 673  LKSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNYLITKLYRDDLFADMLREPDEITIKR 732

Query: 537  RQIRDTLKVLQQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGV----YDGSSPYSTP 704
            RQIRDTLKVLQQAYKTLDEIPLEA+TVERGYSLD+DATGLPR HG+     DGSSPYSTP
Sbjct: 733  RQIRDTLKVLQQAYKTLDEIPLEADTVERGYSLDADATGLPRAHGLSSSFQDGSSPYSTP 792

Query: 705  KQTRPRKSSHSGEQQQPF----SGNGF 773
            KQ R RKSSHSGE Q PF    SGNGF
Sbjct: 793  KQPRSRKSSHSGE-QLPFNPDASGNGF 818



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>AK105435:Os04g0381000 |
          Length = 797

 Score =  199 bits (507), Expect = 2e-51
 Identities = 114/246 (46%), Positives = 159/246 (64%), Gaps = 2/246 (0%)
 Frame = +3

Query: 12   SEKTQKARALLGRTTGVNGVITDQIQGVRSAAEAERPXXXXXXXXXXXXXXXXXXEDRAP 191
            S+++QK+RA+  R     G  +DQ  GV+  A+                        R  
Sbjct: 548  SDRSQKSRAIFARDA-TRGATSDQ--GVQPDADT--------------GTSVAGRNQRGH 590

Query: 192  SSARGSSTNKSYASATPNLEHSFSSIQLKEPPLVLKPSENHSEQEDLEIAITKLLLQSYY 371
            S   GSS++KS A    +L++  S IQL+EPP+ LKPSEN   Q+  E+AI KLL++SYY
Sbjct: 591  SLVAGSSSSKSVARVH-SLDNLISIIQLREPPITLKPSENQPAQDATEVAIVKLLIKSYY 649

Query: 372  NIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREELFGDILREPDEITTKRRQIRD 551
            +IVRK++ED VPKAIMHFLVNHTKRELHN LI  LYRE L  ++LRE DE+  +R++I++
Sbjct: 650  DIVRKSIEDAVPKAIMHFLVNHTKRELHNVLIRKLYRENLLDEMLRETDEVIIRRQRIQE 709

Query: 552  TLKVLQQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGVYDG--SSPYSTPKQTRPRK 725
            TL+VL+QA++TL+E  LEAE VE+GYS    ATGLP++HG+ +G  S  Y++      +K
Sbjct: 710  TLQVLEQAHRTLEEFSLEAEKVEKGYSPAEYATGLPKIHGLSNGDPSIIYASSPNHNRKK 769

Query: 726  SSHSGE 743
            +SH  +
Sbjct: 770  ASHEDQ 775



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>AK111167: |
          Length = 795

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 37/94 (39%), Positives = 63/94 (67%)
 Frame = +3

Query: 315 SEQEDLEIAITKLLLQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREELF 494
           +++E +E  + + L+ SY+NIVR+ + D VPKA+MH LVNH+K  + N L++ LY+E LF
Sbjct: 701 TDREAMETELIRALISSYFNIVRETIADQVPKAVMHLLVNHSKDVVQNRLVSELYKEALF 760

Query: 495 GDILREPDEITTKRRQIRDTLKVLQQAYKTLDEI 596
            D+L E D +  +R +  + L+  ++A K + E+
Sbjct: 761 EDLLYEDDGVKKEREKCEELLQTYREASKIIGEV 794



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>AK073186:Os10g0567800 |
          Length = 618

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREEL--FGDILREPDEITT 530
           + SY  +V   +++ +PKA++H  V   KR L N+  T + R++      +L E   +  
Sbjct: 533 VSSYIGMVSDTLKNTIPKAVVHCQVREAKRSLLNYFYTQVGRKDAKQLAQLLDEDPALME 592

Query: 531 KRRQIRDTLKVLQQAYKTLDEI 596
           +R+Q    L++ + A   +D +
Sbjct: 593 RRQQCFKRLELYKSARDEIDAV 614



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>AK061703:Os10g0567800 |
          Length = 355

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREEL--FGDILREPDEITT 530
           + SY  +V   +++ +PKA++H  V   KR L N+  T + R++      +L E   +  
Sbjct: 270 VSSYIGMVSDTLKNTIPKAVVHCQVREAKRSLLNYFYTQVGRKDAKQLAQLLDEDPALME 329

Query: 531 KRRQIRDTLKVLQQAYKTLDEI 596
           +R+Q    L++ + A   +D +
Sbjct: 330 RRQQCFKRLELYKSARDEIDAV 351



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>AK110493: |
          Length = 790

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYR--EELFGDILREPDEITT 530
           +Q Y  +V   +   VPK+++H LV   ++ L N L   +++  EE    +L+E   +T 
Sbjct: 582 MQMYITMVCDTIVTTVPKSVVHCLVRKAEKNLLNHLFGHVHKMSEEELKRMLQEDASVTE 641

Query: 531 KRRQIRDTLKVLQQAYKTLDEIPLEAETVER 623
           KR  +R     ++ A   +D++  + E V+R
Sbjct: 642 KRAAVRLLYDKIKMA---IDDVQYKQEKVKR 669



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>AK069270:Os09g0572900 |
          Length = 626

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREEL--FGDILREPDEITT 530
           +  Y  +V   +   +PKA++H  V   KR L N     + ++E   FG +L E   +  
Sbjct: 541 VSQYIKMVGDQLLHKIPKAVVHCQVREAKRSLLNHFYVHIGKKEASQFGHLLDEDPAMLE 600

Query: 531 KRRQIRDTLKVLQQAYKTLDEI 596
           +R+Q    L++ + A   +D +
Sbjct: 601 RRQQCWKRLELYKSARDEIDSV 622



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>AK110298: |
          Length = 625

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTL--YREELFGDILREPDEITT 530
           + +Y  IVR  +   VPKA++H  V   K  L + L   +    EE    +L E +E+  
Sbjct: 542 VSAYLQIVRSQLLATVPKAVVHCTVVPAKETLLSDLQEEVAGKEEEQLRRLLNENEEVAR 601

Query: 531 KRRQIRDTLKVLQQAYKTL 587
           +R  +R  L+++++A + +
Sbjct: 602 QRDSLRKRLELMERAAREI 620



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>AK073937:Os04g0592400 |
          Length = 762

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 19/72 (26%), Positives = 37/72 (51%)
 Frame = +3

Query: 180 DRAPSSARGSSTNKSYASATPNLEHSFSSIQLKEPPLVLKPSENHSEQEDLEIAITKLLL 359
           DR  S++R ++  +    AT   + S ++    + P+ +KPS    EQ+ L  A+ + L+
Sbjct: 58  DRKKSASRITTPPEKQGKATKPAQESVAAKPSPQEPVAVKPSSQEQEQQALLAAVQQELV 117

Query: 360 QSYYNIVRKNVE 395
           ++   +V K  E
Sbjct: 118 KAKEELVEKEKE 129



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>Os03g0713100:Os03g0713100 |
          Length = 638

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +3

Query: 357 LQSYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREE--LFGDILREPDEITT 530
           + SY N+V + + + +PKA++H  V   KR L N     +  +E      +L E   +  
Sbjct: 554 VSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 613

Query: 531 KRRQIRDTLKVLQQAYKTLDEI 596
           KR  +   L++ + A   +D +
Sbjct: 614 KRDSLVKRLELYKSARNEIDSV 635



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>AK065908:Os05g0556100 |
          Length = 609

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +3

Query: 363 SYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREEL--FGDILREPDEITTKR 536
           +Y N+V   + + +PK+I++  V   KR L +   T L   E+     +L E   +  +R
Sbjct: 526 AYINMVCSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIKQLSKLLDEDPAVMERR 585

Query: 537 RQIRDTLKVLQQAYKTLDEI 596
             +   L++ + A   +D +
Sbjct: 586 TNLAKRLELYRSAQAEIDAV 605



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>AK103885:Os02g0762200 |
          Length = 324

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +3

Query: 588 DEIPLEAETVERGYSLDSDATGLPRVHGVYDGSSPYSTPKQTRPRKSSHSGEQQQP 755
           D  P++ + +   Y+ ++D   +P V G  + ++P   PK+ +P+       Q QP
Sbjct: 234 DVDPMQEDLLNEIYNKEADEPQIPAVGGTAEETTPAMAPKEAKPQDDPPREAQNQP 289



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>AK072230:Os01g0681100 |
          Length = 426

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +3

Query: 363 SYYNIVRKNVEDFVPKAIMHFLVNHTKRELHNFLITTLYREEL--FGDILREPDEITTKR 536
           +Y N+V  ++ + +PK+I++  V   KR L +   T L   E+     +L E   +  +R
Sbjct: 343 AYVNMVCSSLRNSIPKSIVYCQVREAKRTLLDRFFTELGAREIKHISKLLDEDPAVMERR 402

Query: 537 RQIRDTLKVLQQAYKTLDEI 596
             +   L++ + A   +D +
Sbjct: 403 ANLAKRLELYRSAQAEIDAV 422



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>AK069661:Os04g0544900 |
          Length = 497

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = -1

Query: 683 SIVNTMDSW*TRRIRIQGIASLHCLRFKRYLVQSFVGLLKDLKGIPYLPPLCSYFIRFSE 504
           S++N    W T  I     ++L       Y +   VG L D + +PY+ P+ S+ + +S+
Sbjct: 252 SVLNRSSEWGTHSIHWYFTSALPRSMLVAYPL-CMVGALLDRRIVPYILPVFSFVVLYSK 310

Query: 503 NVPKELLSIKGS 468
              KEL  I  S
Sbjct: 311 LPHKELRFIMAS 322



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>Os04g0201200:Os04g0201200 |
          Length = 795

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 24/101 (23%), Positives = 39/101 (38%)
 Frame = +3

Query: 498 DILREPDEITTKRRQIRDTLKVLQQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGVY 677
           DIL++   + T +   R   +VL+  +    +  +  E VER + L  D  G   V  V 
Sbjct: 592 DILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVERAFDLTEDKFGNYVVQHVL 651

Query: 678 DGSSPYSTPKQTRPRKSSHSGEQQQPFSGNGF*YCLSRSSP 800
           +   P       +          QQ ++ N    CLS  +P
Sbjct: 652 EHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTP 692



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>AK110062: |
          Length = 998

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 666 HGVYDGSSPYSTPKQTRPRKSSHSGEQQQP 755
           H  YD SS YS+ +Q  PR +S +GEQQ P
Sbjct: 437 HDAYD-SSAYSS-QQVSPRYASDAGEQQSP 464



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>AK099483:Os04g0467800 |
          Length = 430

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 190 GARSSLEVNIEPQNEVLPLPEDPGLSASAADRTPWIWSVITPF 62
           G   + E  I   N++L +PED    A +    PWIW  +  +
Sbjct: 366 GGFLTAEAVIRKMNKLLGIPEDTEEGAPSNRNPPWIWCCLKSY 408



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>AK066731:Os08g0518100 |
          Length = 834

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 549 DTLKVLQQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGVYDGSSPYSTP 704
           D  K++++A  +L  I ++A T    + L  D+    RVH     S+P  TP
Sbjct: 408 DVQKLIEKA-NSLQSIAIDANTSSSSFLLKRDSYEFDRVHSNLSSSTPPRTP 458



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>AK066492:Os08g0518100 |
          Length = 435

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 549 DTLKVLQQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGVYDGSSPYSTP 704
           D  K++++A  +L  I ++A T    + L  D+    RVH     S+P  TP
Sbjct: 9   DVQKLIEKA-NSLQSIAIDANTSSSSFLLKRDSYEFDRVHSNLSSSTPPRTP 59



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>D87260:Os04g0194600 |
          Length = 179

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 684 SSPYSTPKQTRPRKSSHSGEQQQPFSGNG 770
           SS  +TP++ RPRKS  S ++    +G G
Sbjct: 35  SSDGATPRRVRPRKSPSSSDRHSKVAGRG 63



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>AK100180:Os04g0194600 |
          Length = 176

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 684 SSPYSTPKQTRPRKSSHSGEQQQPFSGNG 770
           SS  +TP++ RPRKS  S ++    +G G
Sbjct: 32  SSDGATPRRVRPRKSPSSSDRHSKVAGRG 60



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>Os06g0115600:Os06g0115600 |
          Length = 530

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 597 PLEAETVERGYSLDSDATGLPRVHGVYDGSSPYSTPKQTRPRKSSHS 737
           P+  ET+E    L  D T    V+     ++P  TP    P  SS S
Sbjct: 196 PITTETIETANKLRQDLTNASTVNSAPMSNTPSQTPTFVSPSSSSTS 242



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>Os01g0722300:Os01g0722300 |
          Length = 298

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 24/80 (30%), Positives = 30/80 (37%)
 Frame = +3

Query: 567 QQAYKTLDEIPLEAETVERGYSLDSDATGLPRVHGVYDGSSPYSTPKQTRPRKSSHSGEQ 746
           QQ Y T+    ++A T    +S  S  T  P      DGSS  S+     P    H    
Sbjct: 193 QQQYSTITAAAVDAATTTTSWSSPSTGTTSPTASSSTDGSS--SSSNLPWPAVDVHDSTM 250

Query: 747 QQPFSGNGF*YCLSRSSPGL 806
             P S +      S SS GL
Sbjct: 251 MPPLSES------SGSSSGL 264



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>AK110399: |
          Length = 582

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
 Frame = +3

Query: 570 QAYKTLDEIPLEAET---------VERGYSLDSDATGLPRVHGVYDGSSPYSTPKQTRP- 719
           Q Y++    P+ + T         + R +S+DS A+      G+Y G +PYS P  ++P 
Sbjct: 489 QRYQSYSNTPMLSPTEQFAQAGFPLHRPHSMDSFASAFA---GMYTGPNPYSQPFASQPP 545

Query: 720 -----RKSSHSGEQ 746
                R +S S EQ
Sbjct: 546 SRNVSRPASPSWEQ 559



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>AK121879:Os09g0502200 |
          Length = 480

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -2

Query: 187 ARSSLEVNIEPQNEVLPLPEDPGLSASAADRTPWIWSVITPFTP 56
           A + + V+I   NE++P     GL+ASAA    W+   + P+ P
Sbjct: 77  AGTRMRVSIMVPNEIIP-----GLAASAAAADRWVAENLVPYYP 115



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>AK102600:Os09g0502200 |
          Length = 480

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -2

Query: 187 ARSSLEVNIEPQNEVLPLPEDPGLSASAADRTPWIWSVITPFTP 56
           A + + V+I   NE++P     GL+ASAA    W+   + P+ P
Sbjct: 77  AGTRMRVSIMVPNEIIP-----GLAASAAAADRWVAENLVPYYP 115



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>AK101611:Os04g0592700 |
          Length = 891

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = -2

Query: 223 DLFVELPLAEEGARSSLEVNIEPQNEVLPLPEDPGLSASAADRTPWIWSVITPFTPVVLP 44
           D+  E+PL  +   ++ + +I   N +   P D  + + + DRT  IW +      VVL 
Sbjct: 490 DVGSEVPLKAKAVVAAHDKDI---NSLSVSPNDGLVCSGSEDRTACIWKLPNLVPSVVLK 546

Query: 43  NNARAFW 23
            + R  W
Sbjct: 547 GHKRGIW 553


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,194,206
Number of extensions: 683756
Number of successful extensions: 1853
Number of sequences better than 10.0: 27
Number of HSP's gapped: 1850
Number of HSP's successfully gapped: 27
Length of query: 305
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 205
Effective length of database: 11,395,755
Effective search space: 2336129775
Effective search space used: 2336129775
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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