ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf51j11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065724:Os06g0498900 | 762 | 0.0 | 2 | Os09g0364500:Os09g0364500 | 374 | e-103 | 3 | Os02g0104700:Os02g0104700 | 102 | 7e-22 | 4 | AK103410:Os01g0375000 | 40 | 0.005 | 5 | AK119750: | 33 | 0.85 | 6 | U83834: | 32 | 1.5 | 7 | AK109999: | 32 | 1.5 | 8 | Os12g0429600:Os12g0429600 | 30 | 4.2 | 9 | AK119329:Os10g0450400 | 30 | 4.2 | 10 | AK109640:Os01g0604600 | 30 | 7.2 | 11 | AK108044:Os11g0447300 | 30 | 7.2 | 12 | AK108008:Os01g0604600 | 30 | 7.2 | 13 | Os12g0594300:Os12g0594300 | 29 | 9.4 | 14 | Os05g0274900:Os05g0274900 | 29 | 9.4 |
|---|
>AK065724:Os06g0498900 | Length = 681 Score = 762 bits (1968), Expect = 0.0 Identities = 384/449 (85%), Positives = 407/449 (90%) Frame = +1 Query: 142 LDGFTPPGVGYGSITEETLERMXXXXXXXXXXXXXXXXXXXXXXXXDSSAVVCARCHSLR 321 LDGFTPPGVGYG ITEETLER D+ AVVCARCHSLR Sbjct: 210 LDGFTPPGVGYGKITEETLERWKKEKLSKSERKRRAREAKKAEAEEDA-AVVCARCHSLR 268 Query: 322 NYGHVKNDRADNLIPDFDFDRFISSRLMKRSAGTPVIVMVVDCADFDGSFPKRAAKSLFR 501 NYGHVKND+A+NLIPDFDFDRFISSRLMKRSAGTPVIVMV DCADFDGSFPKRAAKSLF+ Sbjct: 269 NYGHVKNDKAENLIPDFDFDRFISSRLMKRSAGTPVIVMVADCADFDGSFPKRAAKSLFK 328 Query: 502 ALEGRGSSKLSETPRLVLVGTKVDLLPWEQMGVRLEKWVRGRAKAFGAPKLDAVYLVSVH 681 ALEGRG+SKLSETPRLVLVGTKVDLLPW+QMGVRLEKWVRGRAKAFGAPKLDAV+L+SVH Sbjct: 329 ALEGRGTSKLSETPRLVLVGTKVDLLPWQQMGVRLEKWVRGRAKAFGAPKLDAVFLISVH 388 Query: 682 KDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLINGFAKKQGVNITRLTEAAVPGTTL 861 KDLSVRNLISYVK+LAGPRSNVWVIGAQNAGKSTLIN FAKKQGV ITRLTEAAVPGTTL Sbjct: 389 KDLSVRNLISYVKELAGPRSNVWVIGAQNAGKSTLINAFAKKQGVKITRLTEAAVPGTTL 448 Query: 862 GILRMTGVLPAKAKMYDTHGLLHPYIMSMRLNTEERKMVEIRKELRPRTFRVKAGQSVHI 1041 GILR+TGVLPAKAKMYDT GLLHPYIMSMRLN+EERKMVEIRKELRPR FRVKAGQSVHI Sbjct: 449 GILRITGVLPAKAKMYDTPGLLHPYIMSMRLNSEERKMVEIRKELRPRCFRVKAGQSVHI 508 Query: 1042 GGLTRLDVLEASVQTIYVTVWASANISLHLGKTENAEELRDKHVGIRLQPPVVPERAAEL 1221 GGLTRLDVL+ASVQTIY+TVWAS ++SLHLGKTENAEELRDKH GIRLQPP+ PER AEL Sbjct: 509 GGLTRLDVLKASVQTIYITVWASPSVSLHLGKTENAEELRDKHFGIRLQPPIRPERVAEL 568 Query: 1222 GQWTERRIDVSGLSWDVSSTDIAVSGLGWYSLGLKGKATVAVHTFDGIDVTQRDAMILHR 1401 G WTER+IDVSG+SWDV+S DIA+SGLGWYSLGLKG ATVAV TFDGIDVT+RDAMILHR Sbjct: 569 GHWTERQIDVSGVSWDVNSMDIAISGLGWYSLGLKGNATVAVWTFDGIDVTRRDAMILHR 628 Query: 1402 AKFLERPGFLLPIAIANAIGEETRKKNAK 1488 A+FLERPGF LPIAIANAIGEETRKKN + Sbjct: 629 AQFLERPGFWLPIAIANAIGEETRKKNER 657
>Os09g0364500:Os09g0364500 | Length = 604 Score = 374 bits (959), Expect = e-103 Identities = 191/411 (46%), Positives = 271/411 (65%), Gaps = 8/411 (1%) Frame = +1 Query: 280 DSSAVVCARCHSLRNYGHVKNDRADNLIPDFDFDRFISSRLMKRSAGTPVIVMVVDCADF 459 ++ VVCARCHSLR+YG VK A+ L+PDFDF + RL S +++++ D +DF Sbjct: 165 ENKVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARSLVLLLADASDF 224 Query: 460 DGSFPKRAAKSLFRALEGRGSS----KLSETPRLVLVGTKVDLLPWEQMGVR-LEKWV-- 618 DGSFP+ A+ + A E GS + PR +LV TK+DLLP + + W Sbjct: 225 DGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHAWAHS 284 Query: 619 RGRAKAFGAPKLDAVYLVSVHKDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLINGF 798 R RA A G +L V+LVS + VR+L+ +V+ LAG R NVW +GA+N GKSTL+N Sbjct: 285 RARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTLLNAI 344 Query: 799 AKKQGVNI-TRLTEAAVPGTTLGILRMTGVLPAKAKMYDTHGLLHPYIMSMRLNTEERKM 975 A+ G+ LTEA VPGTTL ++++ GVL ++AK++DT GLLH + ++ RL EE+K+ Sbjct: 345 ARCSGIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTREEQKL 404 Query: 976 VEIRKELRPRTFRVKAGQSVHIGGLTRLDVLEASVQTIYVTVWASANISLHLGKTENAEE 1155 V + KE+RPRT+R+K GQSVHIGGL RLD+ E +V ++YVTVWAS + LH+GKTENA Sbjct: 405 VRVSKEMRPRTYRLKPGQSVHIGGLVRLDIEELTVGSVYVTVWASPLVPLHMGKTENAAA 464 Query: 1156 LRDKHVGIRLQPPVVPERAAELGQWTERRIDVSGLSWDVSSTDIAVSGLGWYSLGLKGKA 1335 + H G++LQPP+ +R ELG+W ++ VSG SWDV+S DIA++GLGW+ +GLKG+A Sbjct: 465 MVKDHFGLQLQPPIGQQRVNELGKWVRKQFKVSGNSWDVNSKDIAIAGLGWFGIGLKGEA 524 Query: 1336 TVAVHTFDGIDVTQRDAMILHRAKFLERPGFLLPIAIANAIGEETRKKNAK 1488 + + T+DG+DV R++++ RA E GF + ++ A R KN K Sbjct: 525 VLGLWTYDGVDVVSRNSLVHERATIFEEAGFTVSKIVSQADSMANRLKNPK 575
>Os02g0104700:Os02g0104700 | Length = 547 Score = 102 bits (255), Expect = 7e-22 Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 17/314 (5%) Frame = +1 Query: 427 VIVMVVDCADFDGSFPKRAAKSLFRALEGRGSSKLSETPRLVLVGTKVDLLPWEQMGVRL 606 +I+ +VD DF+GSF L R + G++ + +LV TKVDLLP + + Sbjct: 183 LIIKLVDIVDFNGSF-------LARVRDFAGANPI------ILVITKVDLLPRDTDLNCI 229 Query: 607 EKWVRGRAKAFGAPKLD--AVYLVSVHKDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKS 780 WV +A KL+ +V+L S + V +IS ++ R +V+++G+ N GKS Sbjct: 230 GDWV---VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGSANVGKS 285 Query: 781 TLINGFAKKQGVNIT--------RLTEAAVPGTTLGILRMTGVLPAKAKMYDTHGLLHPY 936 I+ + + ++AVPGTTLG +++ L K+YDT G+ + Sbjct: 286 AFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFLGG-GKLYDTPGVHLHH 344 Query: 937 IMSMRLNTEERKMVEIRKELRPRTFRVK------AGQSVHIGGLTRLDVLEASVQTIYVT 1098 + ++ ++ + + LR R F +G S+ GGL R+DV++A +T +T Sbjct: 345 RQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT-RLT 403 Query: 1099 VWASANISLHLGKTENAEELRDKHVGIRLQPPVVPERA-AELGQWTERRIDVSGLSWDVS 1275 + + +++ T A+E ++ VG+ L PP E+A +G R + + D Sbjct: 404 FYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEESDRP 463 Query: 1276 STDIAVSGLGWYSL 1317 + DIA+SGLGW ++ Sbjct: 464 ACDIAISGLGWVAV 477
>AK103410:Os01g0375000 | Length = 591 Score = 40.0 bits (92), Expect = 0.005 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 24/158 (15%) Frame = +1 Query: 526 KLSETPRLVLVGTKVDLLPWEQMGVRLEKWV-----------------RGRAK-AFGAPK 651 K + R+VL+ K+DL+P E + EKW+ R K + + K Sbjct: 178 KADPSKRIVLLLNKIDLVPKESV----EKWLTYLREEMPTVAFKCNTQEQRTKLGWKSSK 233 Query: 652 LDAVYLVSVHKD-LSVRNLISYVKDLAGPRS-----NVWVIGAQNAGKSTLINGFAKKQG 813 +D + D L NLI +K+ + V ++G N GKS+LIN + + Sbjct: 234 IDKSSNIPQSSDCLGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRV 293 Query: 814 VNITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTHGLL 927 VN+ + PG T + + L K K+ D G++ Sbjct: 294 VNV-----GSTPGVTRSMQEVQ--LDKKVKLLDCPGVV 324
>AK119750: | Length = 1213 Score = 32.7 bits (73), Expect = 0.85 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 733 PRSNVWVIGAQNAGKSTLINGFAKKQG---VNITRLTEAAV 846 PR VWV+G GK+TL AK+ G VN+ L +A+ Sbjct: 972 PRKMVWVVGPPGVGKNTLCARLAKEFGYEHVNVGNLCRSAI 1012
>U83834: | Length = 106 Score = 32.0 bits (71), Expect = 1.5 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Frame = -3 Query: 1335 GLALQAQRVPA*AGDRDVRAAHVPAEAG------HIDP-PLCPLAQFGG-SLRHNWWL 1186 GL Q+QR P AG + R++H P+ A H+ P CP+++ G L WWL Sbjct: 16 GLHDQSQRAPWGAGAQVKRSSHCPSSAALELRETHMQPCAYCPVSRHGRLGLSVKWWL 73
>AK109999: | Length = 855 Score = 32.0 bits (71), Expect = 1.5 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = +1 Query: 751 VIGAQNAGKSTLINGFAKKQGVNITRLTEAAVPGTTLGILRMTGV 885 V+G+Q+ GKSTL+N K G N ++E A TT GI G+ Sbjct: 124 VLGSQSTGKSTLLN---KLFGTNFDVMSETARQQTTKGIWMCKGL 165
>Os12g0429600:Os12g0429600 | Length = 1597 Score = 30.4 bits (67), Expect = 4.2 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = +1 Query: 1195 VVPERAAELGQWTERRIDVSGLSWDVSSTDIAVSGLGWYSLGLKGKATVAVHTFDGIDVT 1374 V+ +A+L QWT +S L + S D+ A+H F G+ VT Sbjct: 1281 VLTASSAQLLQWT-----ISSLQSEFSMKDLG-----------------ALHHFLGVTVT 1318 Query: 1375 QRD-AMILHRAKF----LERPG 1425 +RD ++LH+ ++ LERPG Sbjct: 1319 RRDTGLLLHQRQYSLDILERPG 1340
>AK119329:Os10g0450400 | Length = 811 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -3 Query: 1752 NCICVALCARGAERASPPPQLSVAFSAFPLGATHIITI 1639 + I +LC++ ER S P + FS F L +HII + Sbjct: 495 SAILRSLCSQNLERDSLEPNFPILFSTFGLPCSHIILV 532
>AK109640:Os01g0604600 | Length = 152 Score = 29.6 bits (65), Expect = 7.2 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = -1 Query: 596 PICSHGRRSTLVPTRTSLGVSLNL--ELPLPSSARKSDLAALLGNEPSKSAQSTTMTMTG 423 P SH RR LVP GVS L +A + A+LL + +A +TT T TG Sbjct: 33 PHLSHPRRVGLVPPPPVAGVSARLCHHRRRRGAATTAAAASLLDEDVGNNAATTTTTTTG 92
>AK108044:Os11g0447300 | Length = 370 Score = 29.6 bits (65), Expect = 7.2 Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 13/106 (12%) Frame = +1 Query: 670 VSVHKDLSVRNLISYV----KDLAG--PRSNVWVIGAQNAGKSTLINGFAK-------KQ 810 ++ H SV L+ V K+ P V V+G N GKS LIN + Q Sbjct: 105 INAHSTSSVSQLLGLVEFKLKEAISKEPTLLVMVVGVPNVGKSALINSIHRIVTSRFPVQ 164 Query: 811 GVNITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTHGLLHPYIMSM 948 N R T +PG T I + DT G+L P I M Sbjct: 165 DKN-KRATVGPLPGVTQDIAGYKISSQPSIYVLDTPGVLVPSIPDM 209
>AK108008:Os01g0604600 | Length = 110 Score = 29.6 bits (65), Expect = 7.2 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = -1 Query: 596 PICSHGRRSTLVPTRTSLGVSLNL--ELPLPSSARKSDLAALLGNEPSKSAQSTTMTMTG 423 P SH RR LVP GVS L +A + A+LL + +A +TT T TG Sbjct: 33 PHLSHPRRVGLVPPPPVAGVSARLCHHRRRRGAATTAAAASLLDEDVGNNAATTTTTTTG 92
>Os12g0594300:Os12g0594300 | Length = 1097 Score = 29.3 bits (64), Expect = 9.4 Identities = 25/96 (26%), Positives = 44/96 (45%) Frame = +1 Query: 508 EGRGSSKLSETPRLVLVGTKVDLLPWEQMGVRLEKWVRGRAKAFGAPKLDAVYLVSVHKD 687 +G G + + T +V + LL ++M R ++ + AFG L + +V H D Sbjct: 891 DGTGGTLATVTEFMVNGSLRNVLLRKDRMLDRRKRLIIAMDAAFGMEYLHSKSIV--HFD 948 Query: 688 LSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLING 795 L NL+ ++D P V G ++TL++G Sbjct: 949 LKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSG 984
>Os05g0274900:Os05g0274900 | Length = 197 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 11/68 (16%) Frame = -3 Query: 804 LCKPVDQRR-----------FPGILGADHPHVAARPC*ILDVRDQVPHRQILMNTDQVHG 658 LCKPV + R + G+ G H H ARP R+ +Q H Sbjct: 133 LCKPVHKHRELRGLTSAGKKYRGLRGKGHTHHKARPS-----------RRATWKRNQTHK 181 Query: 657 IELGRSEG 634 E GRS+G Sbjct: 182 KEKGRSQG 189 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,421,950 Number of extensions: 938349 Number of successful extensions: 3253 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3241 Number of HSP's successfully gapped: 14 Length of query: 594 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 488 Effective length of database: 11,155,509 Effective search space: 5443888392 Effective search space used: 5443888392 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
