>P20664:PRI1_MOUSE DNA primase small subunit - Mus musculus (Mouse)|
          Length = 417
 Score =  332 bits (851), Expect = 3e-90
 Identities = 175/408 (42%), Positives = 254/408 (62%), Gaps = 2/408 (0%)
 Frame = +2

Query: 215  DYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGRRELSFTLENDIYLRFQSFDSAA 394
            + L++YY +LFPY  +++WL+YG      G  ++Y   RE SFTL++DIY+R+QSF++ +
Sbjct: 11   ELLKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQS 64

Query: 395  ELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDISDYDDVRYC 574
            ELE  +++  P+KIDIG VYS  P  +H   + G   F   E+EL+FDID++DYDDVR C
Sbjct: 65   ELEKEMQKMNPYKIDIGAVYSHRP-NQHNTVKLG--AFQAQEKELVFDIDMTDYDDVRRC 121

Query: 575  CSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVCDSRARKLSNEQ 754
            CS AD C  CW LMT+ ++I+D +L+ DFGF H LWVYSGRRGVHCWVCD   RKLS+  
Sbjct: 122  CSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAV 181

Query: 755  RSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKLLHSQQLFASEER 934
            RS I +Y  + KGG++  KKV L   V HPF+ +S  +++K +FE+  L  Q +  ++E 
Sbjct: 182  RSGIVEYLSLVKGGQDVKKKVHLNEKV-HPFVRKS-INIIKKYFEEYALVGQDILENKEN 239

Query: 935  CQKILELIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQSGK-YKTQGLRRC 1111
              KIL L+P+      +HD+ Q        K   +  RWE L+    S +  K       
Sbjct: 240  WDKILALVPE-----TIHDELQ----RGFQKFHSSPQRWEHLRKVANSSQNMKNDKCGPW 290

Query: 1112 VE-EIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLS 1288
            +E E++  Y +PRLD+ VSK +NHLLK+PF +HPKTGR+ VPID +  + FDP  VPT+S
Sbjct: 291  LEWEVMLQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPTIS 350

Query: 1289 QLLGELNAAGMHIDSENDWERTSLEKHIRFFRTSFLQPMLKACKEELE 1432
             +  EL+    H + E +      +  +R ++ + L P +K  ++ LE
Sbjct: 351  AICRELDMVSTH-EKEKEENEADSKHRVRGYKKTSLAPYVKVFEQFLE 397

>P49642:PRI1_HUMAN DNA primase small subunit - Homo sapiens (Human)|
          Length = 420

 Score =  332 bits (851), Expect = 3e-90
 Identities = 179/410 (43%), Positives = 257/410 (62%), Gaps = 4/410 (0%)
 Frame = +2

Query: 215  DYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGRRELSFTLENDIYLRFQSFDSAA 394
            + L++YY +LFPY  +++WL+YG      G  ++Y   RE SFTL++DIY+R+QSF++ +
Sbjct: 11   ELLKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQS 64

Query: 395  ELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDISDYDDVRYC 574
            +LE  +++  P+KIDIG VYS  P  +H   + G   F   E+EL+FDID++DYDDVR C
Sbjct: 65   DLEKEMQKMNPYKIDIGAVYSHRP-NQHNTVKLG--AFQAQEKELVFDIDMTDYDDVRRC 121

Query: 575  CSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVCDSRARKLSNEQ 754
            CS AD C  CW LMT+ I+I+D +L+ DFGF H LWVYSGRRGVHCWVCD   RKLS+  
Sbjct: 122  CSSADICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAV 181

Query: 755  RSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKLLHSQQLFASEER 934
            RS I +Y  + KGG++  KKV L+  + HPF+ +S  +++K +FE+  L +Q +  ++E 
Sbjct: 182  RSGIVEYLSLVKGGQDVKKKVHLSEKI-HPFIRKS-INIIKKYFEEYALVNQDILENKES 239

Query: 935  CQKILELIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLK--TTLQSGKYKTQGLRR 1108
              KIL L+P+      +HD+ Q     S  K   +  RWE LK   +      K      
Sbjct: 240  WDKILALVPE-----TIHDELQ----QSFQKSHNSLQRWEHLKKVASRYQNNIKNDKYGP 290

Query: 1109 CVE-EIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTL 1285
             +E EI+  Y +PRLD+ VSK +NHLLK+PF +HPKTGR+ VPID    + FDP  VPT+
Sbjct: 291  WLEWEIMLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTI 350

Query: 1286 SQLLGELNAAGMHIDSENDWERTSLEKH-IRFFRTSFLQPMLKACKEELE 1432
            S +  EL+A   + + + + E  S  KH  R ++ + L P +K  +  LE
Sbjct: 351  SFICRELDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEHFLE 400

>O14215:PRI1_SCHPO DNA primase small subunit - Schizosaccharomyces pombe (Fission yeast)|
          Length = 454

 Score =  305 bits (780), Expect = 5e-82
 Identities = 164/414 (39%), Positives = 239/414 (57%), Gaps = 14/414 (3%)
 Frame = +2

Query: 143  VEAMEIDGQQRQEVAA------AVPDGFNADYLRIYYGKLFPYGDFFKWLSYG----NDA 292
            V+  E+D +   E+ A      A     +++ +  YY  LFP+   F+WL++G    ND 
Sbjct: 3    VQIDELDDKDLDEIIANGTLDGAKQGAVDSETMIQYYRHLFPWKYLFQWLNHGPVVTNDF 62

Query: 293  KHPGCDQSYIGRRELSFTLENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAK 472
             H          RE +FTL ND Y+R+ SF +  EL+      CP + ++GPVYS +P  
Sbjct: 63   AH----------REFAFTLPNDAYIRYLSFSNWEELKKEALNLCPSRFEVGPVYSANPRD 112

Query: 473  RHAYAQSGNNVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLR 652
            R    +S    F P+++EL+FDID++DYDDVR CCS  + C  CWP +TI +++LD    
Sbjct: 113  RKTIRKS---TFHPLKKELVFDIDMTDYDDVRTCCSKTNICEKCWPFITIAVQVLDICFH 169

Query: 653  GDFGFNHILWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGG-ENSLKKVPLTG 829
             DFGF HILWVYSGRRG+H W+CD  A  L +  R  IA Y +V  G  +  ++ +    
Sbjct: 170  EDFGFKHILWVYSGRRGIHAWICDEIACSLDDRSRRMIASYLQVVVGNPQGGVRLINNLK 229

Query: 830  PVLHPFLARSYTDVLKCFFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQGNR 1009
              LHP L RS  ++LK  F   +L  Q  +AS+E  + +L+L+PD+++AS L  KW+   
Sbjct: 230  RPLHPHLTRS-LNILKSAFVKIVLEDQDPWASKEGAENLLKLLPDKDLASALRKKWE--- 285

Query: 1010 RSSISKEDVNATRWEQLKTTLQSGKYKT---QGLRRCVEEIVFSYTYPRLDMEVSKHMNH 1180
               +  E  +  +W  + T L SG   +     +    ++IV +Y YPRLD+EVS+H+NH
Sbjct: 286  ---VDPERSSKNKWSDIDTVLASGSIASISPSVIAIAKQDIVLTYLYPRLDVEVSRHLNH 342

Query: 1181 LLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLSQLLGELNAAGMHIDSEND 1342
            LLK+PFC+HP T RVCVPID    + F+P  VPT++ LL EL+      +S+ND
Sbjct: 343  LLKSPFCVHPGTSRVCVPIDIERMDSFNPLKVPTVNDLLQELDK-----NSQND 391

>Q24317:PRI1_DROME DNA primase small subunit - Drosophila melanogaster (Fruit fly)|
          Length = 438

 Score =  301 bits (771), Expect = 6e-81
 Identities = 171/431 (39%), Positives = 237/431 (54%), Gaps = 15/431 (3%)
 Frame = +2

Query: 137  ERVEAMEIDGQQRQEVAA-AVPDGFNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQ 313
            E+V   E    Q+Q  A  A       D L +YY +LFP+  F++WLSYG+       + 
Sbjct: 3    EQVTDQENQAPQQQTTAVHAYNPEVLQDMLPVYYRRLFPHLPFYRWLSYGSS------ED 56

Query: 314  SYIGRRELSFTLENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQS 493
            +    RE+SFTL++DIY+R+  FD+ AELE  I  + P KIDIGPV    P K H     
Sbjct: 57   AIFSNREISFTLQDDIYIRYLCFDTQAELEKEICSRNPIKIDIGPVMHSKP-KNHRSIPG 115

Query: 494  GNNVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNH 673
            G     PV+REL+FDID++DYD+VR CCSGA  CL CW  M +  ++LD +LR DFGF H
Sbjct: 116  G---LTPVQRELVFDIDMTDYDEVRTCCSGAGVCLKCWKFMVLAARVLDVALREDFGFEH 172

Query: 674  ILWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRV-----YKGGENSLKKVPLTGPVL 838
            I+W++SGRRG+HCWVCD +AR L    R A+A+Y  +     + GG +    +   G   
Sbjct: 173  IIWIFSGRRGIHCWVCDYQARHLDGRGRYAVAEYLNIITYASFAGGNSPRCSM---GDRP 229

Query: 839  HPFLARSYTDVLKCFFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSS 1018
            H  L R+   +++  FE+ +L  Q LF + +   K+L ++ D+    EL    Q N    
Sbjct: 230  HHSLKRA-LKIVEPMFEEIVLEDQNLFGTPKGVTKLLNMVHDDAARGELESYMQKNLEDG 288

Query: 1019 ISKEDVNATRWEQLKTTLQSGKYKT-----QGLRRCVEEIVFSYTYPRLDMEVSKHMNHL 1183
                 V    WE       S +  T     + L+  V EI     YPRLD+ V++  NHL
Sbjct: 289  AHSRLV----WESFIKYANSMRTSTTSAWSRKLKNIVAEIQLGLLYPRLDINVTRGFNHL 344

Query: 1184 LKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLSQLLGELNA----AGMHIDSENDWER 1351
            LKAPFCIHP TG+VCVP   +    FDPT VPT++QLL E+NA    +  ++++  D  R
Sbjct: 345  LKAPFCIHPATGKVCVPFSVSAVAKFDPTTVPTITQLLHEINAFDDKSKSYMEAPEDKSR 404

Query: 1352 TSLEKHIRFFR 1384
                K    F+
Sbjct: 405  IKDHKKTSMFK 415

>Q25998:PRI1_PLAFK DNA primase small subunit - Plasmodium falciparum (isolate K1 /|
            Thailand)
          Length = 452

 Score =  288 bits (737), Expect = 5e-77
 Identities = 163/445 (36%), Positives = 248/445 (55%), Gaps = 27/445 (6%)
 Frame = +2

Query: 173  RQEVAAAVPDGF-NADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGC---DQSYIGRRELS 340
            + E+   + D   N + L  YY  L P  D + WL+Y ND K       D  +  +RE S
Sbjct: 2    KMEIVGDIKDSIVNENDLIFYYRSLCPINDLYNWLNYKNDIKGKYTKLNDPHFFSKREFS 61

Query: 341  FTLEN------DIYLRFQSFDSAAELETSI-KEKCPFKIDIGPVYSVDPAKRHAYAQSGN 499
            FT +       +IY+R+ SF +  E +  +  +  P K DIG +Y+   +++    Q G+
Sbjct: 62   FTCKKSDQGKEEIYIRWLSFSNPEEFKNKLLSDLVPIKFDIGAIYNFPVSQKD---QKGD 118

Query: 500  NVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHIL 679
             +F+PV++ELIFDID++DYDD+R CC+    C  CW  +T+ I +LDT+LR DF F HIL
Sbjct: 119  -IFLPVQKELIFDIDMNDYDDIRTCCTDKKVCKLCWKFLTVAIVLLDTALREDFSFEHIL 177

Query: 680  WVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARS 859
            WVYSGRRG+HCWV D   R  + + R+A+ADY  +  G +   KKV + G   +P   R+
Sbjct: 178  WVYSGRRGIHCWVADESCRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERA 237

Query: 860  YTDVLKCFFEDKLLHSQQLF-ASEERCQKILELIP-------DENVASELHDKWQGNRRS 1015
            +    K F  D L+  Q  F       QK+++ +P       D   A +L++  +    +
Sbjct: 238  FDICYKYF--DVLMEEQDFFKKGSPHVQKLIDYLPYASGKVTDPLKAMKLNELKEYINNN 295

Query: 1016 SISKEDVNATRWEQLKTTLQSGKYKTQ-------GLRRCVEEIVFSYTYPRLDMEVSKHM 1174
            + +  ++   ++  +   L    Y  +        +   V+EIVF +TYPRLD+ VSK +
Sbjct: 296  NFNSREI-FEKFSSIYNFLTPSNYFKRKNVSGNINMPSFVKEIVFHFTYPRLDINVSKEI 354

Query: 1175 NHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLSQLLGEL-NAAGMHIDSENDWER 1351
            NHLLK+PFCIH  TGRVCVP+D  N  +F+P +VPTL  L  +  +    HI++EN   R
Sbjct: 355  NHLLKSPFCIHNSTGRVCVPLDIKNINNFNPQSVPTLKLLREQFDDPKNSHIEAEN---R 411

Query: 1352 TSLEKHIRFFRTSFLQPMLKACKEE 1426
            TSL+ +I +FR  F++ +L +C E+
Sbjct: 412  TSLKPYIDYFRRHFIENILLSCVEK 436

>Q7KQM1:PRI1_PLAF7 DNA primase small subunit - Plasmodium falciparum (isolate 3D7)|
          Length = 452

 Score =  288 bits (737), Expect = 5e-77
 Identities = 163/445 (36%), Positives = 248/445 (55%), Gaps = 27/445 (6%)
 Frame = +2

Query: 173  RQEVAAAVPDGF-NADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGC---DQSYIGRRELS 340
            + E+   + D   N + L  YY  L P  D + WL+Y ND K       D  +  +RE S
Sbjct: 2    KMEIVGDIKDSIVNENDLIFYYRSLCPINDLYNWLNYKNDIKGKYTKLNDPHFFSKREFS 61

Query: 341  FTLEN------DIYLRFQSFDSAAELETSI-KEKCPFKIDIGPVYSVDPAKRHAYAQSGN 499
            FT +       +IY+R+ SF +  E +  +  +  P K DIG +Y+   +++    Q G+
Sbjct: 62   FTCKKSDQGKEEIYIRWLSFSNPEEFKNKLLSDLVPIKFDIGAIYNFPVSQKD---QKGD 118

Query: 500  NVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHIL 679
             +F+PV++ELIFDID++DYDD+R CC+    C  CW  +T+ I +LDT+LR DF F HIL
Sbjct: 119  -IFLPVQKELIFDIDMNDYDDIRTCCTDKKVCKLCWKFLTVAIVLLDTALREDFSFEHIL 177

Query: 680  WVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARS 859
            WVYSGRRG+HCWV D   R  + + R+A+ADY  +  G +   KKV + G   +P   R+
Sbjct: 178  WVYSGRRGIHCWVADESCRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERA 237

Query: 860  YTDVLKCFFEDKLLHSQQLF-ASEERCQKILELIP-------DENVASELHDKWQGNRRS 1015
            +    K F  D L+  Q  F       QK+++ +P       D   A +L++  +    +
Sbjct: 238  FDICYKYF--DVLMEEQDFFKKGSPHVQKLIDYLPYASGKVTDPLKAMKLNELKEYINNN 295

Query: 1016 SISKEDVNATRWEQLKTTLQSGKYKTQ-------GLRRCVEEIVFSYTYPRLDMEVSKHM 1174
            + +  ++   ++  +   L    Y  +        +   V+EIVF +TYPRLD+ VSK +
Sbjct: 296  NFNSREI-FEKFSSIYNFLTPSNYFKRKNVSGNINMPSFVKEIVFHFTYPRLDINVSKEI 354

Query: 1175 NHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLSQLLGEL-NAAGMHIDSENDWER 1351
            NHLLK+PFCIH  TGRVCVP+D  N  +F+P +VPTL  L  +  +    HI++EN   R
Sbjct: 355  NHLLKSPFCIHNSTGRVCVPLDIKNINNFNPQSVPTLKLLREQFDDPKNSHIEAEN---R 411

Query: 1352 TSLEKHIRFFRTSFLQPMLKACKEE 1426
            TSL+ +I +FR  F++ +L +C E+
Sbjct: 412  TSLKPYIDYFRRHFIENILLSCVEK 436

>P10363:PRI1_YEAST DNA primase small subunit - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 409

 Score =  250 bits (638), Expect = 2e-65
 Identities = 156/418 (37%), Positives = 223/418 (53%), Gaps = 7/418 (1%)
 Frame = +2

Query: 200  DGFNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGRRELSFTLENDIYLRFQS 379
            +G ++  +  YY  L+P+   F WL   N +  P  D      RE +    +  Y R+ S
Sbjct: 8    NGPSSSDMEYYYKSLYPFKHIFNWL---NHSPKPSRDMI---NREFAMAFRSGAYKRYNS 61

Query: 380  FDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDISDYD 559
            F+S  + +  I++  P + +IG +Y+  P +R    +S       +E+EL+FDID+ DYD
Sbjct: 62   FNSVQDFKAQIEKANPDRFEIGAIYNKPPRERDTLLKSELKA---LEKELVFDIDMDDYD 118

Query: 560  DVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVCDSRARK 739
              R CCSGA  C  CW  +++ +KI +T+LR DFG+   +WV+SGRRG HCWV D RAR 
Sbjct: 119  AFRTCCSGAQVCSKCWKFISLAMKITNTALREDFGYKDFIWVFSGRRGAHCWVSDKRARA 178

Query: 740  LSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKLLHSQQLF 919
            L++ QR  + DY  V +   N+ K++ L  P  HP LARS  + LK FF   +L  Q  +
Sbjct: 179  LTDVQRRNVLDYVNVIR-DRNTDKRLALKRP-YHPHLARS-LEQLKPFFVSIMLEEQNPW 235

Query: 920  ASEERC-QKILELIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQSGKYKTQ 1096
              ++   Q +L  + D+ +   L   W  N R S SKE  N    +Q+ T+L  G  +  
Sbjct: 236  EDDQHAIQTLLPALYDKQLIDSLKKYWLDNPRRS-SKEKWNDI--DQIATSLFKGPKQDS 292

Query: 1097 ---GLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCEDFDP 1267
                LR C E++V    YP+LD+EV+K   HLLKAPFCIHP TG VCVPID    E F P
Sbjct: 293  HIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLLKAPFCIHPATGNVCVPID----ESFAP 348

Query: 1268 TAVPTLSQLLGELNAAGMHIDSENDWERTSLEKHIRFFR---TSFLQPMLKACKEELE 1432
               P L  L  E+       +  ND   T+L+  I  F+   +S L+  L + K E E
Sbjct: 349  EKAPKLIDLQTEM-------EKNNDVSLTALQPFINQFQAYVSSLLKNELGSVKRERE 399

>P34471:PRI1_CAEEL DNA primase small subunit - Caenorhabditis elegans|
          Length = 410

 Score =  222 bits (566), Expect = 3e-57
 Identities = 142/420 (33%), Positives = 205/420 (48%), Gaps = 23/420 (5%)
 Frame = +2

Query: 221  LRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGRRELSFTLENDIYLRFQSFDSAAEL 400
            L IYY   FP   F KWL YG +      +  Y  RRE +F L +D+++R++S++     
Sbjct: 12   LPIYYKNFFPVKPFTKWLRYGQN------NGDYFNRREFAFILADDVHIRYRSYNDEHAF 65

Query: 401  ETSIKEKCPFKIDIGPVYSVDPA--KRHAYAQSGNNVFVPVERELIFDIDISDYDDVRYC 574
              ++    P K+DIG VY+ +P   KRH   Q+       VEREL+FDID++DYD VR C
Sbjct: 66   FKALSSTNPEKLDIGAVYNHEPINNKRHTDYQA-------VERELVFDIDLTDYDPVRNC 118

Query: 575  CSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVCDSRARKLSNEQ 754
            C  A  C  CW  M + +KILD  L   F F   +WV+SGRRGVHCWV D +AR L+N Q
Sbjct: 119  CKDATVCPKCWKFMVLAVKILDFQLEDMFDFKARMWVFSGRRGVHCWVGDKKARMLNNYQ 178

Query: 755  RSAIADYFRVYK--------GGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKLLHSQ 910
            RSAIA    ++K         G   + KVP       P +  ++   LK    +K+++ Q
Sbjct: 179  RSAIATRLNLFKKNGQCEVTEGRAKMTKVP-------PIVRDAFNVALKDGVFEKMIYDQ 231

Query: 911  QLFASEERCQKILELIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQSG--- 1081
                 E       + I +    SE+    + + RS          RW  ++         
Sbjct: 232  GWLDKE-------DFITEYKFMSEV---GRDDLRSLSETYKTPQERWNMIRGLFDDDYRK 281

Query: 1082 ---------KYKTQGL-RRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCV 1231
                      +K QG  R  +   V    YPRLD+ VS   NHLLK+PFCIHPKTG V V
Sbjct: 282  SLSPKDGLLDFKMQGRDRNYLLYFVLQRCYPRLDVNVSTGTNHLLKSPFCIHPKTGNVAV 341

Query: 1232 PIDPNNCEDFDPTAVPTLSQLLGELNAAGMHIDSENDWERTSLEKHIRFFRTSFLQPMLK 1411
            P++    E+FD +  P +  ++ EL++  +  +  ND    S  +    ++   L P ++
Sbjct: 342  PLNVGKIEEFDVSKCPRIDHVVEELSS--LLAERGNDENEDSKNRKFLAYKHGALAPYVE 399

>O26685:PRIS_METTH Probable DNA primase small subunit - Methanobacterium|
            thermoautotrophicum
          Length = 323

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 8/312 (2%)
 Frame = +2

Query: 368  RFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDI 547
            R++ F     L   ++ + PF       +  +P KR  + +S          ELIFD+D 
Sbjct: 51   RYRVFRDERSLARFMRVRYPFAAYSSVAFYREPWKRKGWQRS----------ELIFDVDA 100

Query: 548  SDYDDVRYC-CSGA-DTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVC 721
             D   VR C C G   TCLD      +V+ ++DT L+GD G   I  +YSG RG H  V 
Sbjct: 101  KDLP-VRSCECDGVCPTCLD--EARELVLMMVDT-LKGDLGLGDIHVIYSG-RGYHVRVL 155

Query: 722  DSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKL- 898
            D    +L +E R+ I  Y                T     P   R +TD +  +  +   
Sbjct: 156  DPEVMELGSEVRAEILRY----------------TAGAREP--RRKFTDGVSSYEMEHFS 197

Query: 899  --LHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSSISKED-VNATRWEQLKTT 1069
              L   ++F    R   +L L  DE    ++ D      ++++   + +   RW + ++ 
Sbjct: 198  IPLGYHRVFTERAR-HVLLHLRGDE----DIEDVTARTVKTAVRNRNLILEDRWGEFRSV 252

Query: 1070 LQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNN 1249
            +    Y      R V+ I        LD +V+  +  +L+ P  +H K   +C+ +   N
Sbjct: 253  IGPRVYP-----RLVKGI-SKINMRMLDAKVTIDLKRILRLPTSLHSKVSMICMEV--KN 304

Query: 1250 CEDFDP--TAVP 1279
             E FDP  +AVP
Sbjct: 305  PETFDPLKSAVP 316

>Q6L0W5:PRIS_PICTO Probable DNA primase small subunit - Picrophilus torridus|
          Length = 370

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 77/335 (22%), Positives = 143/335 (42%), Gaps = 15/335 (4%)
 Frame = +2

Query: 320  IGRRELSFTLENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGN 499
            I +RE+ +   +   +R  SF +  E+E+ +K   P  +     Y + P ++    +   
Sbjct: 26   ISKREIGYIPFSGTMIRHLSFRNHREIESFVKRNTPRHLYYSSAYYIKPDEKRMEKKIWE 85

Query: 500  NVFVPVERELIFDID---ISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFN 670
                    ELIFD+D   I   D + Y     +  L+   +   V ++L+  L  DFGF+
Sbjct: 86   GA------ELIFDLDADHIPGSDKMTY----EEILLE---VKKHVSRLLNY-LINDFGFD 131

Query: 671  H--ILWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENSL----KKVPLTGP 832
               I   +SG RG H  V   R   L ++ R  I +Y ++     +++    ++ P +GP
Sbjct: 132  DDSIKLYFSGGRGYHVHVVSDRVYSLDSDARREIGNYIKMEDFTIDNIIRASREKPESGP 191

Query: 833  V--LHPFLARSYTD--VLKCFFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQ 1000
            +   + +++  Y+D   LK F+              +R  K L++  D            
Sbjct: 192  LKRFNEYISEIYSDENYLKRFYNGDF----------DRYYKSLDVYKD------------ 229

Query: 1001 GNRRSSISKEDVNATRWEQLKTTLQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNH 1180
            G ++  I +E+     +E+ K      K     L   + +    Y+   +D  V+  ++ 
Sbjct: 230  GKKKIDIMREN----NYEKFKIV---SKRDLDVLNNILNDFKDKYS-AEIDEPVTTDVHR 281

Query: 1181 LLKAPFCIHPKTGRVCVPIDPNNCEDFDP--TAVP 1279
            L++ P  +H KTG    P++ N  ++FDP  +AVP
Sbjct: 282  LIRFPGSLHGKTGLAVTPVNINEFDNFDPLISAVP 316

>Q5JJ72:PRIS_PYRKO Probable DNA primase small subunit - Pyrococcus kodakaraensis|
            (Thermococcus kodakaraensis)
          Length = 346

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 77/317 (24%), Positives = 122/317 (38%), Gaps = 13/317 (4%)
 Frame = +2

Query: 368  RFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDI 547
            R  +F    +LE  I+   P+       +  +P +   +  +          EL+FDID 
Sbjct: 51   RKNAFSDVRDLEDYIRATAPYAAYSSVAFYRNPQEMEGWLGA----------ELVFDIDA 100

Query: 548  SDYDDVRYCCS---GADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWV 718
             D   +R C +       C  C      + +     L+ DFGF +I  VYSG RG H  V
Sbjct: 101  KDLP-LRRCQNEHPSGQVCPICLEDAKELARDTLIILKEDFGFENIHVVYSG-RGYHIRV 158

Query: 719  CDSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKL 898
             D  A KL ++ R  I  Y        ++ ++V             ++ D+ K +    +
Sbjct: 159  IDEWALKLDSKARERILSYV-------SAAEEV-------------TFDDIQKRYI---M 195

Query: 899  LHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQS 1078
            L S        R    ++ I      +E H K  G +RS+  K     TR + ++  +  
Sbjct: 196  LSSGYFRVFRLRFGYFIQRI------NENHLKNIGLKRSTAEKLLDEKTRQDIVEKFVNK 249

Query: 1079 GKY----KTQGLRRCVEEIVFSYTYPR--LDMEVSKHMNHLLKAPFCIHPKTGRVCVPI- 1237
            G      +  G R  +     S T+ +   D  V+  +  +L+ P  +H K G V   I 
Sbjct: 250  GLLAAFPEGVGYRTLLRLFGLSTTFSKAYFDGRVTVDLKRILRLPSTLHSKVGLVATYIG 309

Query: 1238 -DPNNCEDFDP--TAVP 1279
             D    E FDP   AVP
Sbjct: 310  SDEKRLEKFDPFKDAVP 326

>O29516:PRIS_ARCFU Probable DNA primase small subunit - Archaeoglobus fulgidus|
          Length = 335

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 74/317 (23%), Positives = 114/317 (35%), Gaps = 4/317 (1%)
 Frame = +2

Query: 329  RELSFT----LENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSG 496
            RE +F     L + +  R  SF S  +    I    P  I     Y   PA+     +  
Sbjct: 29   REFAFVPLELLPDFVMHRHISFRSETDFRAYILSNVPAHIYFSSAYYERPAEDKMENKGW 88

Query: 497  NNVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHI 676
                  +  +LIFDID +D+  V+     A +      +    IK L   LR DFG   +
Sbjct: 89   ------LGADLIFDID-ADHLPVK-----AQSFEKALEMAKREIKKLTAVLRADFGIRDM 136

Query: 677  LWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLAR 856
               +SG RG H  V D     L + +R  I DY R             L  P        
Sbjct: 137  KIYFSGGRGYHVHVHDEEFLSLGSAERREIVDYLR-------------LNSP-------- 175

Query: 857  SYTDVLKCFFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSSISKEDV 1036
                  K   ED+  +S          +K LE   DE + S+L  K    ++  ++K+ +
Sbjct: 176  ------KIVVEDRFANSNAAKRVLNYLRKKLE--EDERLTSKLKIKPADLKKEKLTKKVI 227

Query: 1037 NATRWEQLKTTLQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKT 1216
                                   R VE+  +S     +D  V+  +  L++ P  +H KT
Sbjct: 228  -----------------------RAVEKFDYSALSIYIDAPVTADVKRLIRLPGSLHGKT 264

Query: 1217 GRVCVPIDPNNCEDFDP 1267
            G     ++  + E F+P
Sbjct: 265  GLRVTEVE--DIESFNP 279

>Q5V554:PRIS_HALMA Probable DNA primase small subunit - Haloarcula marismortui|
            (Halobacterium marismortui)
          Length = 392

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 4/256 (1%)
 Frame = +2

Query: 524  ELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRG 703
            +L+FD+D      V     G D+  +        ++ L   L  DFGF+ +  V+SG RG
Sbjct: 94   DLVFDLDADHLPSV---VLGEDSYAEMLAKCKDALRRLLDFLEDDFGFDDLTIVFSGGRG 150

Query: 704  VHCWVCDSRARKLSNEQRSAIADYFR-VYKGGENSLKKVPLTGPVLHPFLARSYTDVLKC 880
             H  V D R R L  + R  + DY R +    +  + +  + G       A+  T   + 
Sbjct: 151  YHVHVRDERIRHLERDARREVVDYVRGIGLEFDELVDEESVAGTAGRSSPAQKRTLSTEG 210

Query: 881  FFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSSISKEDVNATR--WE 1054
             +  +  H   L   ++       L  +E  A E   ++ G      +   +NA R  +E
Sbjct: 211  GWSAR-AHRHMLAVVDDL------LAMEEADALEQLQEYDGIGEGKATAA-LNAARSNYE 262

Query: 1055 QLKT-TLQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCV 1231
            QL+   +       Q  +  + E+V +   P +D  V+   N L++ P  +H  +G    
Sbjct: 263  QLEAGNIDVHPAFYQLAKILLHEVVAADNAP-IDEPVTTDTNRLIRLPGSLHGGSGLEVQ 321

Query: 1232 PIDPNNCEDFDPTAVP 1279
             ID ++ + FDP   P
Sbjct: 322  RIDRDDLDAFDPLVDP 337

>Q9HPU3:PRIS_HALSA Probable DNA primase small subunit - Halobacterium salinarium|
            (Halobacterium halobium)
          Length = 391

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 64/269 (23%), Positives = 101/269 (37%), Gaps = 17/269 (6%)
 Frame = +2

Query: 524  ELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRG 703
            +L+FD+D    D +     G D+  +        +  L   L  DFGF  +   +SG RG
Sbjct: 94   DLVFDLDA---DHLPRVTLGEDSYAEMLSKCKDALLRLLDFLERDFGFEELTVTFSGGRG 150

Query: 704  VHCWVCDSRARKLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFL----------- 850
             H  V D+   +L +E+R  I DY R   G + +L+ +    PV    L           
Sbjct: 151  YHVHVRDAGVYELGSEERREIVDYVR---GNDLALETLVEAEPVGGRGLENPTEKRMLPA 207

Query: 851  ----ARSYTDVLKCFFEDKLLHSQQLFASEERCQKILELIPDENVASELHDKWQGNRRSS 1018
                 R  T  L+ F +D                 ++E   D+ VA+       G R + 
Sbjct: 208  DGGWGRRVTTRLEAFADD-----------------LIERGEDDAVATLTEFDGVGERSAR 250

Query: 1019 ISKEDVNATRWEQLKTTLQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPF 1198
                 V        +  +          RR ++E V +   P +D  V+   N L++ P 
Sbjct: 251  AIYNVVADNTTAVKRGNVDVHPAFLTVARRYIDETVAAEQAP-IDEPVTTDTNRLIRLPG 309

Query: 1199 CIHPKTGRVCVPIDPNNCEDFDP--TAVP 1279
             +H  +G     +D    +DFDP   AVP
Sbjct: 310  SLHGGSGLEVQRLDRAALDDFDPLVDAVP 338

>Q8ZTY1:PRIS_PYRAE Probable DNA primase small subunit - Pyrobaculum aerophilum|
          Length = 312

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 1/155 (0%)
 Frame = +2

Query: 320 IGRRELSFTLENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGN 499
           + +RE +F   +   +R +SF S  +L   + EK P  I     Y   P +     +   
Sbjct: 22  VDKREFAFQPFSGGMVRHKSFKSLEDLRKFVVEKTPRHIYHSAAYYERPGEEDMERKGW- 80

Query: 500 NVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWP-LMTIVIKILDTSLRGDFGFNHI 676
                +  +LIFDID  D+ D   C       L C         K++D  ++ +      
Sbjct: 81  -----IGADLIFDID-GDHLDTEACRESKIVSLRCLEDAREEANKLIDVLIQ-ELDLKPT 133

Query: 677 LWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYFR 781
             V+SG RG H  V      KL + +R  + +Y +
Sbjct: 134 RIVFSGNRGFHIHVSSEEVMKLGSRERRELVNYLK 168

>Q9YEZ8:PRIS_AERPE Probable DNA primase small subunit - Aeropyrum pernix|
          Length = 342

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
 Frame = +2

Query: 320 IGRRELSFTL-ENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSG 496
           I  RE +F L + D+Y+R   FDS  EL + +  + P            P  R    +  
Sbjct: 30  IAYREFAFQLFDGDVYVRHIGFDSMEELLSYMAREAPKNAYYSVARYSLPTARSMEEKGW 89

Query: 497 NNVFVPVERELIFDIDISDYDDVRYCCSG-ADTCLDCWPLMTIVIKILDTSLRGDFGFNH 673
                 +  EL+FDID+   D +  C     D+CL       +    L  +L  DFG   
Sbjct: 90  ------LGSELMFDIDV---DSLEGCGEVLGDSCLSRGYKQAVR---LVEALYRDFGVPS 137

Query: 674 ILWVYSGRRGVHCWVCDSRARKLSNEQRSAIADYF 778
            L+ ++G RG H        R+L  E+R  IA YF
Sbjct: 138 TLY-FTGNRGFHVLADCGWCRRLGREERREIARYF 171

>O57934:PRIS_PYRHO DNA primase small subunit - Pyrococcus horikoshii|
          Length = 346

 Score = 41.2 bits (95), Expect = 0.014
 Identities = 29/84 (34%), Positives = 38/84 (45%)
 Frame = +2

Query: 524 ELIFDIDISDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRG 703
           EL+FDID  D    R        C  C      +++     LR + GFN I  +YSG RG
Sbjct: 91  ELVFDIDAKDLPLRRCEHEPGTVCPICLNDAKEIVRDTVIILREELGFNDIHIIYSG-RG 149

Query: 704 VHCWVCDSRARKLSNEQRSAIADY 775
            H  V D  A KL ++ R  I  +
Sbjct: 150 YHIRVLDEWALKLDSKSRERILSF 173

>Q9HJJ2:PRIS_THEAC Probable DNA primase small subunit - Thermoplasma acidophilum|
          Length = 322

 Score = 38.5 bits (88), Expect = 0.091
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
 Frame = +2

Query: 320 IGRRELSFTLENDIYLRFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGN 499
           I +RE+ +   +   +R    ++  EL   +++  P  +     Y   P +R    +   
Sbjct: 20  ISKREVGYMTFSGEVIRHLKINNRFELNMLLRDAAPMHVYSSAAYYRKPDERKMPEKEWG 79

Query: 500 NVFVPVERELIFDIDISDYDDVRYCCSGADTCLDCWPLMTI---VIKILDTSLRGDFGF- 667
                   +LIFD+D SD+        G++       L+ I     +++   L  DFG  
Sbjct: 80  GA------DLIFDLD-SDH------LPGSEKLSQKEMLIQIRDQTERLVSDFLIADFGIP 126

Query: 668 -NHILWVYSGRRGVHCWVCDSRARKLSNEQRSAIADY 775
            + I   +SG RG H  + D R  +L ++ R  I DY
Sbjct: 127 KSSIKIYFSGNRGYHVHISDDRVYRLGSDARREITDY 163

>Q9P9H1:PRIS_PYRFU DNA primase small subunit - Pyrococcus furiosus|
          Length = 347

 Score = 38.5 bits (88), Expect = 0.091
 Identities = 34/133 (25%), Positives = 52/133 (39%)
 Frame = +2

Query: 368 RFQSFDSAAELETSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFVPVERELIFDIDI 547
           R   +    +LE  I+   P+ +     +  +P +   +  +          EL+FDID 
Sbjct: 49  RKNQYSDIRDLEDYIRATSPYAVYSSVAFYENPREMEGWRGA----------ELVFDIDA 98

Query: 548 SDYDDVRYCCSGADTCLDCWPLMTIVIKILDTSLRGDFGFNHILWVYSGRRGVHCWVCDS 727
            D    R        C  C      + K     LR + GF +I  VYSG RG H  + D 
Sbjct: 99  KDLPLKRCNHEPGTVCPICLEDAKELAKDTLIILREELGFENIHVVYSG-RGYHIRILDE 157

Query: 728 RARKLSNEQRSAI 766
            A +L ++ R  I
Sbjct: 158 WALQLDSKSRERI 170

>Q979L5:PRIS_THEVO Probable DNA primase small subunit - Thermoplasma volcanium|
          Length = 333

 Score = 33.9 bits (76), Expect = 2.3
 Identities = 17/74 (22%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +2

Query: 1070 LQSGKYKTQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNN 1249
            + + K   + + R ++++  S+    +D  V+  ++ L++ P  +H K+G +   +D + 
Sbjct: 211  INAEKISQKQIERAIDQVK-SHNATMVDAPVTYDIHRLIRMPQSLHGKSGMMVKEVDLDK 269

Query: 1250 CEDFDP--TAVPTL 1285
             +DFDP   A+P +
Sbjct: 270  FDDFDPLSDAIPKI 283

>Q5F2E7:NUFP2_MOUSE Nuclear fragile X mental retardation-interacting protein 2 - Mus|
           musculus (Mouse)
          Length = 692

 Score = 33.9 bits (76), Expect = 2.3
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -1

Query: 836 GQAQSKELSSVNSHHPYRHGSSQQLQTFVHCLAFLLYYHKPSNGHHGDHYIP 681
           GQ Q +   S   HHP+ H   QQ Q   H   +  Y H  ++ HH  H  P
Sbjct: 6   GQPQPQHHHS--HHHPHHHPQQQQQQQSHHHHHYYFYNHSHNHHHHHHHQQP 55

>Q46C74:PRIS_METBF Probable DNA primase small subunit - Methanosarcina barkeri (strain|
           Fusaro / DSM 804)
          Length = 414

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = +2

Query: 524 ELIFDIDISDYDDVRYCCSGADTCLDCWPLMTI-VIKILDTSLRGDFGFNH--ILWVYSG 694
           ELIFD+D     D            D   L+     K++D  L  DFGF+   I  V+SG
Sbjct: 94  ELIFDLDADHLPDA------PKNYADMLELVKKETFKLMDFLLE-DFGFSEQEIELVFSG 146

Query: 695 RRGVHCWVCDSRARKLSNEQRSAIADY 775
            RG H  V   +  KL + +R  I +Y
Sbjct: 147 GRGYHFHVRSPKVLKLGSAERREIVNY 173

>Q922L6:NELFD_MOUSE Negative elongation factor D - Mus musculus (Mouse)|
          Length = 591

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 33/167 (19%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
 Frame = +2

Query: 974  ASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQSGKYKTQGLRRCVEEIVFSY---TYP 1144
            A+ + + W+ N+R SI K+++ +T  + ++T       + +G    V E+   Y    +P
Sbjct: 364  AASVVETWKKNKRVSIGKDELKSTS-KAIETVHNLCCNENKGASELVAELSTLYQCIRFP 422

Query: 1145 RLDMEVSKHMNHLLKAPFCIHPKTGRVCVPI----DPNNCEDFDPTAVPTLSQLLGELNA 1312
             + M V K ++  +  P     +T    V +    + + C       V  L   L E   
Sbjct: 423  VVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEH 482

Query: 1313 AGMHIDSENDWERTSLEKHIRFFRTSFLQPM---LKACKEELETAYS 1444
            + + +  + + ++T L++ +      ++ P+   ++ C E+L+T  S
Sbjct: 483  SQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDIS 529

>Q8IXH7:NELFD_HUMAN Negative elongation factor C/D - Homo sapiens (Human)|
          Length = 590

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
 Frame = +2

Query: 974  ASELHDKWQGNRRSSISKEDVNATRWEQLKTTLQSGKYKTQGLRRCVEEIVFSY---TYP 1144
            A+ + + W+ N+R SI+K+++ +T  + ++T       + +G    V E+   Y    +P
Sbjct: 363  AASVVETWKKNKRVSINKDELKSTS-KAVETVHNLCCNENKGASELVAELSTLYQCIRFP 421

Query: 1145 RLDMEVSKHMNHLLKAPFCIHPKTGRVCVPI----DPNNCEDFDPTAVPTLSQLLGELNA 1312
             + M V K ++  +  P     +T    V +    + + C       V  L   L E   
Sbjct: 422  VVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEH 481

Query: 1313 AGMHIDSENDWERTSLEKHIRFFRTSFLQPM---LKACKEELETAYS 1444
            + + +  + + ++T L++ +      ++ P+   ++ C E+L+T  S
Sbjct: 482  SQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDIS 528

>Q5HP21:ARGC_STAEQ N-acetyl-gamma-glutamyl-phosphate reductase - Staphylococcus|
            epidermidis (strain ATCC 35984 / RP62A)
          Length = 341

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
 Frame = +2

Query: 1109 CVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLS 1288
            C  +I   +TY   ++    H N  +  P C    T     PI  N+    D   V   S
Sbjct: 117  CTVDIQKRFTYGLSEVMNISHRNRFIANPGCYATATELALYPIISNHLIRVDSIIVDAKS 176

Query: 1289 QLLG---ELNAAGMHIDSENDWERTSLEKH 1369
             L G   +LN +  +++  N++    L KH
Sbjct: 177  GLTGAGKKLNQSSHYVNVNNNYVTYKLNKH 206

>Q8BYG9:EPHAA_MOUSE Ephrin type-A receptor 10 precursor - Mus musculus (Mouse)|
          Length = 1007

 Score = 32.3 bits (72), Expect = 6.6
 Identities = 23/76 (30%), Positives = 31/76 (40%)
 Frame = +2

Query: 14  TGRVPRCQRQANPSAAAKATTTQVXXXXXXXXXXXXXEMGDERVEAMEIDGQQRQEVAAA 193
           T RV      + P+AAA AT  QV             E+  +RVE   +    R+ V A 
Sbjct: 422 TVRVAALNGVSGPAAAAGATYAQVTVSTGPGAPWEEDEIRRDRVEPQSVSLSWREPVPAG 481

Query: 194 VPDGFNADYLRIYYGK 241
            P   + +Y   YY K
Sbjct: 482 APGTNSTEYEIRYYEK 497

>Q8BVN4:MTER2_MOUSE mTERF domain-containing protein 2 - Mus musculus (Mouse)|
          Length = 346

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 23/77 (29%), Positives = 33/77 (42%)
 Frame = +2

Query: 737 KLSNEQRSAIADYFRVYKGGENSLKKVPLTGPVLHPFLARSYTDVLKCFFEDKLLHSQQL 916
           KLS+ Q    + Y R    GE  LK+V    P +     R    V+K   E  L  +Q +
Sbjct: 153 KLSSMQMKRRSSYLRKLGLGEGKLKRVLSVCPEVFTMHQRDIDRVVKVLREKCLFTAQHI 212

Query: 917 FASEERCQKILELIPDE 967
                RC  +L+  P+E
Sbjct: 213 TDVLHRCPTVLQEDPNE 229

>Q3BJS3:FOXN3_XENLA Forkhead box protein N3 - Xenopus laevis (African clawed frog)|
          Length = 485

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = -3

Query: 207 KPSGTAAATSWRCCPSISMASTLSSPISDED*IDLP 100
           KP GT  + S +C  S    STLS+P+ D+D +D P
Sbjct: 10  KPEGTGISVSSQCYRS----STLSNPLQDDDDLDFP 41

>Q8CP35:ARGC_STAES N-acetyl-gamma-glutamyl-phosphate reductase - Staphylococcus|
            epidermidis (strain ATCC 12228)
          Length = 341

 Score = 32.0 bits (71), Expect = 8.6
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
 Frame = +2

Query: 1109 CVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVCVPIDPNNCEDFDPTAVPTLS 1288
            C  +I   +TY   ++    H N  +  P C    T     P+  N+    D   V   S
Sbjct: 117  CTVDIQKRFTYGLSEVMNISHRNRFIANPGCYATATELALYPLISNHLIRVDSIIVDAKS 176

Query: 1289 QLLG---ELNAAGMHIDSENDWERTSLEKH 1369
             L G   +LN +  +++  N++    L KH
Sbjct: 177  GLTGAGKKLNQSSHYVNVNNNYVTYKLNKH 206


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 312,224,593
Number of extensions: 7018583
Number of successful extensions: 19525
Number of sequences better than 10.0: 29
Number of HSP's gapped: 19487
Number of HSP's successfully gapped: 29
Length of query: 591
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 472
Effective length of database: 68,045,334
Effective search space: 32117397648
Effective search space used: 32117397648
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)