ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf51j04 |
|---|---|
| Clone Library Name | barley_pub |
>O22969:Y2416_ARATH Uncharacterized protein At2g34160 - Arabidopsis thaliana (Mouse-ear| cress) Length = 130 Score = 45.4 bits (106), Expect = 2e-04 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Frame = +1 Query: 94 NVIQISS-KRDTGFYVFLSKLFLMDFGEIELHGLGDAITICVKVGEALTRYGYTTIKRIE 270 N IQ+S+ K+ FYV L+K ++ + ++EL LG AI V V E L G+ K+I Sbjct: 21 NRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIM 80 Query: 271 TSTL 282 TST+ Sbjct: 81 TSTV 84
>P38085:VAL1_YEAST Valine/tyrosine/tryptophan amino-acid permease - Saccharomyces| cerevisiae (Baker's yeast) Length = 619 Score = 31.2 bits (69), Expect = 3.5 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +3 Query: 471 VLTATHKERQKLLLQNTCVKFCFEILLLYLVASFINCILSVHSYNKTNLI 620 +L+A +E + N C K + ILL+Y++ + + C L YN L+ Sbjct: 301 LLSAAEQENPTKSIPNACKKVVYRILLIYMLTTILVCFLV--PYNSDELL 348
>Q98EB7:Y4317_RHILO UPF0391 membrane protein msr4317 - Rhizobium loti (Mesorhizobium| loti) Length = 53 Score = 30.0 bits (66), Expect = 7.9 Identities = 15/34 (44%), Positives = 24/34 (70%) Frame = -3 Query: 353 LMISLAFFPLLGPFSLAASAASGARVEVSILLIV 252 L+I A LLG +LA +AA+GAR+ + I+L++ Sbjct: 8 LLIVAAAASLLGMPALAGAAATGARILIGIVLVI 41
>Q8NXZ0:SYK_STAAW Lysyl-tRNA synthetase - Staphylococcus aureus (strain MW2)| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>Q53638:SYK_STAAU Lysyl-tRNA synthetase - Staphylococcus aureus| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>Q6GBX1:SYK_STAAS Lysyl-tRNA synthetase - Staphylococcus aureus (strain MSSA476)| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>Q6GJF4:SYK_STAAR Lysyl-tRNA synthetase - Staphylococcus aureus (strain MRSA252)| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>P67610:SYK_STAAN Lysyl-tRNA synthetase - Staphylococcus aureus (strain N315)| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>P67609:SYK_STAAM Lysyl-tRNA synthetase - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92
>Q5HIF7:SYK_STAAC Lysyl-tRNA synthetase - Staphylococcus aureus (strain COL)| Length = 495 Score = 30.0 bits (66), Expect = 8.0 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 14/61 (22%) Frame = -2 Query: 210 DSDGISQTVKFDLSEIHKEELGEEDVESSISLGGDL--------------NDVAGRLDLF 73 D G+S +K + + KEEL E++ +S +++ G L D+AG++ ++ Sbjct: 32 DRSGLSSDLKEEWDQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIY 91 Query: 72 V 70 V Sbjct: 92 V 92 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 90,176,365 Number of extensions: 1620829 Number of successful extensions: 4635 Number of sequences better than 10.0: 10 Number of HSP's gapped: 4635 Number of HSP's successfully gapped: 10 Length of query: 220 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 111 Effective length of database: 70,788,284 Effective search space: 7857499524 Effective search space used: 7857499524 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
