ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51i24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5ZMD4:TRI59_CHICK Tripartite motif-containing protein 59 - Gall... 32 4.8

>Q5ZMD4:TRI59_CHICK Tripartite motif-containing protein 59 - Gallus gallus (Chicken)|
          Length = 408
 Score = 32.3 bits (72), Expect = 4.8
 Identities = 24/112 (21%), Positives = 47/112 (41%)
 Frame = +1

Query: 232 LSKEVLVQVASIETSYAIWSTLSNMFSAQSRSRVNNCRQPLSNDQKGSQSPTAYFGQMRA 411
           L ++ L  V  +E    +   L +++S     ++N    P        +  +    + R 
Sbjct: 265 LKEKELPDVKPVEVYPRVGHLLKDVWSKTEIGQINKILTPKIKLVPKRKLHSKNSEKERG 324

Query: 412 LSDELAVAGKPLPEEELISFIVAGLDMEYHPLISSLDVRTDPLSIDELFGMI 567
             +EL  A  PL    + + I+A   + +H  ISS+ + + P  I + FG +
Sbjct: 325 KPEELLQAANPLSVTFIFTVIIAIAVLSFHKPISSVVIESIPTHISDFFGFL 376


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 228,205,609
Number of extensions: 5195368
Number of successful extensions: 13327
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13318
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 343
Effective length of database: 68,593,924
Effective search space: 23527715932
Effective search space used: 23527715932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top