| Clone Name | FLbaf51i24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and glutathione S-transferase 1 genes, complete cds Length = 13710 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 2 aataccatctccgagcctctcacaagaaccaactatgtcctatggagagc 51 ||||||||||||||||||||||| | |||||||||| | |||||| |||| Sbjct: 10513 aataccatctccgagcctctcactaaaaccaactatattctatggcgagc 10464
>gb|AY513748.1| Oreochromis mossambicus calmodulin mRNA, complete cds Length = 773 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 957 gaacaattctcaatggaaaaag 978 |||||||||||||||||||||| Sbjct: 701 gaacaattctcaatggaaaaag 722
>emb|X99997.1|BFPAL B.finlaysoniana mRNA for phenylalanine ammonia-lyase Length = 2249 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1040 tcaccgaccacatcacccataagctc 1065 ||||||||||| |||||||||||||| Sbjct: 940 tcaccgaccacctcacccataagctc 965
>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete sequence Length = 193813 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 746 aagctggtggtggtggcggagg 767 |||||||||||||||||||||| Sbjct: 139895 aagctggtggtggtggcggagg 139874
>emb|CT831640.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA034J04, full insert sequence Length = 1526 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 92 agctggtggtggtggcggagg 72
>ref|NM_001064967.1| Oryza sativa (japonica cultivar-group) Os06g0693200 (Os06g0693200) mRNA, complete cds Length = 1567 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 131 agctggtggtggtggcggagg 111
>ref|XM_512484.2| PREDICTED: Pan troglodytes coagulation factor II (thrombin) receptor-like 3 (F2RL3), mRNA Length = 2882 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 gtggcggcagaggcagagatg 703 ||||||||||||||||||||| Sbjct: 2671 gtggcggcagaggcagagatg 2691
>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence Length = 184091 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 680 gcggtggcggcagaggcagag 700 ||||||||||||||||||||| Sbjct: 53718 gcggtggcggcagaggcagag 53698
>ref|NM_003950.2| Homo sapiens coagulation factor II (thrombin) receptor-like 3 (F2RL3), mRNA Length = 2731 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 gtggcggcagaggcagagatg 703 ||||||||||||||||||||| Sbjct: 2520 gtggcggcagaggcagagatg 2540
>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence Length = 170971 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1217 caagtctttggtgtcatcaaa 1237 ||||||||||||||||||||| Sbjct: 52514 caagtctttggtgtcatcaaa 52534
>gb|AC008737.11| Homo sapiens chromosome 19 clone CTD-2538G9, complete sequence Length = 248281 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 gtggcggcagaggcagagatg 703 ||||||||||||||||||||| Sbjct: 207543 gtggcggcagaggcagagatg 207563
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 680 gcggtggcggcagaggcagag 700 ||||||||||||||||||||| Sbjct: 13594877 gcggtggcggcagaggcagag 13594857
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 ataatcatatttcaaaggatt 937 ||||||||||||||||||||| Sbjct: 9629898 ataatcatatttcaaaggatt 9629878
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 28557748 agctggtggtggtggcggagg 28557728
>gb|AY643809.1| Acanthopagrus schlegelii preproghrelin gene, complete cds Length = 3945 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1231 catcaaaatctcatcagaaag 1251 ||||||||||||||||||||| Sbjct: 1157 catcaaaatctcatcagaaag 1137
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 gctgatctctttcattgtcgc 479 ||||||||||||||||||||| Sbjct: 1862688 gctgatctctttcattgtcgc 1862708
>gb|AF384819.2|AF384819 Homo sapiens coagulation factor II receptor-like 3 (F2RL3) gene, complete cds Length = 11828 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 gtggcggcagaggcagagatg 703 ||||||||||||||||||||| Sbjct: 3825 gtggcggcagaggcagagatg 3845
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 164781 agctggtggtggtggcggagg 164761
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 49226 agctggtggtggtggcggagg 49206
>gb|AC092915.7| Homo sapiens 3 BAC RP11-585F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187215 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 910 tagaaaaataatcatatttca 930 ||||||||||||||||||||| Sbjct: 116701 tagaaaaataatcatatttca 116681
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 ataatcatatttcaaaggatt 937 ||||||||||||||||||||| Sbjct: 69995 ataatcatatttcaaaggatt 69975
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 680 gcggtggcggcagaggcagag 700 ||||||||||||||||||||| Sbjct: 63879 gcggtggcggcagaggcagag 63859
>dbj|AK110236.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-F11, full insert sequence Length = 4386 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ctcttcggcatgatccgcaac 573 ||||||||||||||||||||| Sbjct: 956 ctcttcggcatgatccgcaac 976
>dbj|AK105794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H11, full insert sequence Length = 1567 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 131 agctggtggtggtggcggagg 111
>dbj|AK059727.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C12, full insert sequence Length = 1064 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 agctggtggtggtggcggagg 767 ||||||||||||||||||||| Sbjct: 54 agctggtggtggtggcggagg 34
>gb|AF055917.1|AF055917 Homo sapiens protease-activated receptor 4 mRNA, complete cds Length = 4895 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 683 gtggcggcagaggcagagatg 703 ||||||||||||||||||||| Sbjct: 2520 gtggcggcagaggcagagatg 2540
>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete sequence Length = 151967 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tgcctatacaccatggctcat 194 ||||||||||||||||||||| Sbjct: 16210 tgcctatacaccatggctcat 16190
>emb|AL928575.7| Mouse DNA sequence from clone RP23-37A11 on chromosome 2, complete sequence Length = 167375 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gtacatatatcaaaccattgt 110 ||||||||||||||||||||| Sbjct: 88449 gtacatatatcaaaccattgt 88469
>emb|AL928551.8| Mouse DNA sequence from clone RP23-246P12 on chromosome 4, complete sequence Length = 215620 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1226 ggtgtcatcaaaatctcatca 1246 ||||||||||||||||||||| Sbjct: 147431 ggtgtcatcaaaatctcatca 147451 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 253,912,692 Number of extensions: 14871830 Number of successful extensions: 292519 Number of sequences better than 10.0: 29 Number of HSP's gapped: 292519 Number of HSP's successfully gapped: 29 Length of query: 1381 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1358 Effective length of database: 18,503,978,556 Effective search space: 25128402879048 Effective search space used: 25128402879048 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)