ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51i23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK102292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-122
2ref|NM_001050078.1| Oryza sativa (japonica cultivar-group) Os01g... 442 e-120
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 325 4e-85
4dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D... 325 4e-85
5gb|AY106082.1| Zea mays PCO136762 mRNA sequence 113 3e-21
6emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 ... 58 2e-04
7gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete se... 50 0.037
8gb|AC092966.6| Homo sapiens 3 BAC RP11-143P4 (Roswell Park Cance... 46 0.59
9gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, comp... 44 2.3
10gb|AC091854.3| Homo sapiens chromosome 5 clone CTD-2293C22, comp... 44 2.3
11gb|AC015890.9| Mus musculus chromosome 10, clone RP21-244O21, co... 44 2.3
12gb|AC025913.11| Mus musculus 10 BAC RP23-287L13 (Roswell Park Ca... 44 2.3
13gb|AC012302.5|AC012302 Mus musculus chromosome 10, clone RP21-24... 44 2.3
14gb|DQ119104.1| Aeromonas hydrophila FlaA (flaA), FlaB (flaB), Fl... 44 2.3
15gb|AC149593.5| Mus musculus BAC clone RP23-34O23 from 7, complet... 44 2.3
16ref|NR_003247.1| Mus musculus CEA-related cell adhesion molecule... 42 9.1
17dbj|AB251919.1| Bacteriophage phiK38-1 DNA, region around attP a... 42 9.1
18gb|CP000312.1| Clostridium perfringens SM101, complete genome 42 9.1
19gb|AC187107.3| Gallus gallus BAC clone CH261-144B12 from chromos... 42 9.1
20ref|XM_001111621.1| PREDICTED: Macaca mulatta eukaryotic transla... 42 9.1
21gb|AC146541.2| Gasterosteus aculeatus clone CH213-33P7, complete... 42 9.1
22dbj|AB159669.1| Nemalionopsis tortuosa chloroplast tufA gene for... 42 9.1
23gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, compl... 42 9.1
24gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, comp... 42 9.1
25emb|AL691523.6| Human DNA sequence from clone RP13-531C17 on chr... 42 9.1
26gb|AC161379.2| Mus musculus BAC clone RP23-207P12 from chromosom... 42 9.1
27gb|AC008859.5| Homo sapiens chromosome 5 clone CTD-2183N12, comp... 42 9.1
28gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, comple... 42 9.1
29emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chro... 42 9.1
30gb|AC021646.35| Homo sapiens 12 BAC RP11-511B23 (Roswell Park Ca... 42 9.1
31gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete s... 42 9.1
32emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, c... 42 9.1
33gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete... 42 9.1
34emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in... 42 9.1
35emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chr... 42 9.1
36emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chrom... 42 9.1
37emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chro... 42 9.1
38gb|M94581.1|SMOBNHE Trout sodium-hydrogen exchange protein beta ... 42 9.1

>dbj|AK102292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089K24, full
           insert sequence
          Length = 2163
 Score =  450 bits (227), Expect = e-122
 Identities = 452/527 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 tgagctgcaagtggccattatcagaatgggtgaaagtaacgagaatatccagttttcatg 251
           ||||||||||||  ||||||||||||||| ||  ||||| ||||||||||| || |||||
Sbjct: 160 tgagctgcaagttaccattatcagaatggatggtagtaatgagaatatccaattctcatg 219

                                                                       
Query: 252 gggaaataagagagcaaaaggtggtgccaagatggatacacagttctatggttccttcac 311
           ||| || ||||||||||||||||||   ||||||||||||||||| ||||  ||||||||
Sbjct: 220 ggggaagaagagagcaaaaggtggtattaagatggatacacagttttatgactccttcac 279

                                                                       
Query: 312 ctttgacaatgtgaagtactcactgtatgactgtgtatatctttttaaaaatggagaacc 371
            ||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||  |
Sbjct: 280 atttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagtggtgagtc 339

                                                                       
Query: 372 tgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaagaaagtaaa 431
           |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||
Sbjct: 340 tgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaagaaagtaaa 399

                                                                       
Query: 432 gattctttggtttttcaccccggatgagatcagaaattatttagaaggccccgtggtgga 491
           |||||||||||||||   ||||||||||||  ||||  |||||   ||||| ||  ||||
Sbjct: 400 gattctttggttttttctcccggatgagattcgaaaacatttaagtggccctgtaatgga 459

                                                                       
Query: 492 gaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaacccactgga 551
            || |||||||||||||||| |||||| |||  ||||||||| |||||||||||||||||
Sbjct: 460 aaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaacccactgga 519

                                                                       
Query: 552 atctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgccagcc 611
           | |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| || ||
Sbjct: 520 agctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtcaacc 579

                                                                       
Query: 612 taccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttggaaa 671
           | |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||   | 
Sbjct: 580 ttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaacag 639

                                                          
Query: 672 ctgcacactttctgagcaagtacctgagaaaattgtagggctggaag 718
            |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 640 ttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 686



 Score =  172 bits (87), Expect = 4e-39
 Identities = 228/275 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1300 gctgataaggaggggaagctggtgtatattcagaatcttgacatacggtttggagcttct 1359
            |||||| || ||||||  || ||||| ||||| ||||||||||||| ||||| |||| ||
Sbjct: 1181 gctgatgagcaggggacacttgtgtacattcaaaatcttgacatacagtttgcagctgct 1240

                                                                        
Query: 1360 gaaatagtggaacttatacgtgaggcgctacaactgtcttgtactgctaagcctattaac 1419
            || |||| ||| ||||||||||| ||  |||||||   |||||  |||||||||||||||
Sbjct: 1241 gacatagaggagcttatacgtgatgctttacaactaaattgtatcgctaagcctattaac 1300

                                                                        
Query: 1420 cacccgacctacgatgatcctaacaatggaaaagcatatgttgtattcaaatctagaagt 1479
            ||||| || || |||||||| ||||||||||||||||||| | |||||||| | | ||||
Sbjct: 1301 cacccaacttatgatgatccaaacaatggaaaagcatatgctatattcaaaacaaaaagt 1360

                                                                        
Query: 1480 gctgctgatgaagctgttatgaaaattaattcaggcttggttgtgggtggaagacccctt 1539
            || || ||    ||| ||   |||||||||||||||||||| || |||||||||||||||
Sbjct: 1361 gccgcagactctgctatttcaaaaattaattcaggcttggtggtcggtggaagacccctt 1420

                                               
Query: 1540 tactgcagcaaagggttactcaaggtcccaaaacc 1574
            || ||||||||||| || || ||||| ||||||||
Sbjct: 1421 tattgcagcaaaggattgcttaaggttccaaaacc 1455



 Score =  139 bits (70), Expect = 5e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1629 aagacaacgagaagagcagaagaaggcagtgtcgacatcacattgttctcaacccaacac 1688
            ||||||||||||||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 1507 aagacaacgagaagaacagaagaaggcagtttcaacctcgcattgttctcaacccaatac 1566

                                                              
Query: 1689 aatagaatatgatctggccttggattggatgcttgtccgagaaaagcaag 1738
            ||| || |||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 1567 aatggagtatgatttggccttggattggatgcttgtccgagcaaagcaag 1616



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 889 atggaggatgaaattcctgttgctgcagttcccctttcccagtcagt 935
           ||||||||||||| ||| |||||||||||| ||||| ||| ||||||
Sbjct: 803 atggaggatgaaagtccagttgctgcagtttcccttcccccgtcagt 849



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>ref|NM_001050078.1| Oryza sativa (japonica cultivar-group) Os01g0610300 (Os01g0610300)
           mRNA, complete cds
          Length = 2162

 Score =  442 bits (223), Expect = e-120
 Identities = 451/527 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 tgagctgcaagtggccattatcagaatgggtgaaagtaacgagaatatccagttttcatg 251
           |||||| |||||  ||||||||||||||| ||  ||||| ||||||||||| || |||||
Sbjct: 159 tgagctacaagttaccattatcagaatggatggtagtaatgagaatatccaattctcatg 218

                                                                       
Query: 252 gggaaataagagagcaaaaggtggtgccaagatggatacacagttctatggttccttcac 311
           ||| || ||||||||||||||||||   ||||||||||||||||| ||||  ||||||||
Sbjct: 219 ggggaagaagagagcaaaaggtggtattaagatggatacacagttttatgactccttcac 278

                                                                       
Query: 312 ctttgacaatgtgaagtactcactgtatgactgtgtatatctttttaaaaatggagaacc 371
            ||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||  |
Sbjct: 279 atttgacaatgtgaagtactcactgtatgacaatgtatatctttttaagagtggtgagtc 338

                                                                       
Query: 372 tgaaccatacattggaaagatagtaaagatatggcagcaaaatgaagctaagaaagtaaa 431
           |||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||
Sbjct: 339 tgaaccttacattggaaagataataaagatatggcagcaaaatcaggctaagaaagtaaa 398

                                                                       
Query: 432 gattctttggtttttcaccccggatgagatcagaaattatttagaaggccccgtggtgga 491
           |||||||||||||||   ||||||||||||  ||||  |||||   ||||| ||  ||||
Sbjct: 399 gattctttggttttttctcccggatgagattcgaaaacatttaagtggccctgtaatgga 458

                                                                       
Query: 492 gaatgagatatttcttgcttctggtgatggcactggccttgccgatatcaacccactgga 551
            || |||||||||||||||| |||||| |||  ||||||||| |||||||||||||||||
Sbjct: 459 aaaggagatatttcttgcttgtggtgaaggcgttggccttgctgatatcaacccactgga 518

                                                                       
Query: 552 atctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgccagcc 611
           | |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| || ||
Sbjct: 519 agctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtcaacc 578

                                                                       
Query: 612 taccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttggaaa 671
           | |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||   | 
Sbjct: 579 ttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaacag 638

                                                          
Query: 672 ctgcacactttctgagcaagtacctgagaaaattgtagggctggaag 718
            |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 639 ttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 685



 Score =  172 bits (87), Expect = 4e-39
 Identities = 228/275 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1300 gctgataaggaggggaagctggtgtatattcagaatcttgacatacggtttggagcttct 1359
            |||||| || ||||||  || ||||| ||||| ||||||||||||| ||||| |||| ||
Sbjct: 1180 gctgatgagcaggggacacttgtgtacattcaaaatcttgacatacagtttgcagctgct 1239

                                                                        
Query: 1360 gaaatagtggaacttatacgtgaggcgctacaactgtcttgtactgctaagcctattaac 1419
            || |||| ||| ||||||||||| ||  |||||||   |||||  |||||||||||||||
Sbjct: 1240 gacatagaggagcttatacgtgatgctttacaactaaattgtatcgctaagcctattaac 1299

                                                                        
Query: 1420 cacccgacctacgatgatcctaacaatggaaaagcatatgttgtattcaaatctagaagt 1479
            ||||| || || |||||||| ||||||||||||||||||| | |||||||| | | ||||
Sbjct: 1300 cacccaacttatgatgatccaaacaatggaaaagcatatgctatattcaaaacaaaaagt 1359

                                                                        
Query: 1480 gctgctgatgaagctgttatgaaaattaattcaggcttggttgtgggtggaagacccctt 1539
            || || ||    ||| ||   |||||||||||||||||||| || |||||||||||||||
Sbjct: 1360 gccgcagactctgctatttcaaaaattaattcaggcttggtggtcggtggaagacccctt 1419

                                               
Query: 1540 tactgcagcaaagggttactcaaggtcccaaaacc 1574
            || ||||||||||| || || ||||| ||||||||
Sbjct: 1420 tattgcagcaaaggattgcttaaggttccaaaacc 1454



 Score =  139 bits (70), Expect = 5e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1629 aagacaacgagaagagcagaagaaggcagtgtcgacatcacattgttctcaacccaacac 1688
            ||||||||||||||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 1506 aagacaacgagaagaacagaagaaggcagtttcaacctcgcattgttctcaacccaatac 1565

                                                              
Query: 1689 aatagaatatgatctggccttggattggatgcttgtccgagaaaagcaag 1738
            ||| || |||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 1566 aatggagtatgatttggccttggattggatgcttgtccgagcaaagcaag 1615



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 889 atggaggatgaaattcctgttgctgcagttcccctttcccagtcagt 935
           ||||||||||||| ||| |||||||||||| ||||| ||| ||||||
Sbjct: 802 atggaggatgaaagtccagttgctgcagtttcccttcccccgtcagt 848



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  325 bits (164), Expect = 4e-85
 Identities = 326/380 (85%)
 Strand = Plus / Plus

                                                                            
Query: 171      aggcctatggtaagggcaaattgagctgcaagtggccattatcagaatgggtgaaagtaa 230
                |||| |||||| || ||| | |||||| |||||  ||||||||||||||| ||  |||||
Sbjct: 24134852 aggcttatggtgagtgcacagtgagctacaagttaccattatcagaatggatggtagtaa 24134911

                                                                            
Query: 231      cgagaatatccagttttcatggggaaataagagagcaaaaggtggtgccaagatggatac 290
                 ||||||||||| || |||||||| || ||||||||||||||||||   |||||||||||
Sbjct: 24134912 tgagaatatccaattctcatgggggaagaagagagcaaaaggtggtattaagatggatac 24134971

                                                                            
Query: 291      acagttctatggttccttcacctttgacaatgtgaagtactcactgtatgactgtgtata 350
                |||||| ||||  |||||||| ||||||||||||||||||||||||||||||  ||||||
Sbjct: 24134972 acagttttatgactccttcacatttgacaatgtgaagtactcactgtatgacaatgtata 24135031

                                                                            
Query: 351      tctttttaaaaatggagaacctgaaccatacattggaaagatagtaaagatatggcagca 410
                ||||||||| | ||| ||  ||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 24135032 tctttttaagagtggtgagtctgaaccttacattggaaagataataaagatatggcagca 24135091

                                                                            
Query: 411      aaatgaagctaagaaagtaaagattctttggtttttcaccccggatgagatcagaaatta 470
                |||| | |||||||||||||||||||||||||||||   ||||||||||||  ||||  |
Sbjct: 24135092 aaatcaggctaagaaagtaaagattctttggttttttctcccggatgagattcgaaaaca 24135151

                                                                            
Query: 471      tttagaaggccccgtggtggagaatgagatatttcttgcttctggtgatggcactggcct 530
                ||||   ||||| ||  |||| || |||||||||||||||| |||||| |||  ||||||
Sbjct: 24135152 tttaagtggccctgtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggcct 24135211

                                    
Query: 531      tgccgatatcaacccactgg 550
                ||| ||||||||||||||||
Sbjct: 24135212 tgctgatatcaacccactgg 24135231



 Score =  123 bits (62), Expect = 3e-24
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                            
Query: 549      ggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgcca 608
                |||| |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 24136016 ggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtca 24136075

                                                                            
Query: 609      gcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttgg 668
                 ||| |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||  
Sbjct: 24136076 accttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaa 24136135

                                                                  
Query: 669      aaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 718
                 |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 24136136 cagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 24136185



 Score =  115 bits (58), Expect = 8e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1645     cagaagaaggcagtgtcgacatcacattgttctcaacccaacacaatagaatatgatctg 1704
                |||||||||||||| || || || ||||||||||||||||| ||||| || |||||| ||
Sbjct: 24139669 cagaagaaggcagtttcaacctcgcattgttctcaacccaatacaatggagtatgatttg 24139728

                                                  
Query: 1705     gccttggattggatgcttgtccgagaaaagcaag 1738
                ||||||||||||||||||||||||| ||||||||
Sbjct: 24139729 gccttggattggatgcttgtccgagcaaagcaag 24139762



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                            
Query: 1372     cttatacgtgaggcgctacaactgtcttgtactgctaagcctattaaccacccgacctac 1431
                ||||||||||| ||  |||||||   |||||  |||||||||||||||||||| || || 
Sbjct: 24138809 cttatacgtgatgctttacaactaaattgtatcgctaagcctattaaccacccaacttat 24138868

                                 
Query: 1432     gatgatcctaacaatgg 1448
                |||||||| ||||||||
Sbjct: 24138869 gatgatccaaacaatgg 24138885



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 889      atggaggatgaaattcctgttgctgcagttcccctttcccagtcagt 935
                ||||||||||||| ||| |||||||||||| ||||| ||| ||||||
Sbjct: 24136415 atggaggatgaaagtccagttgctgcagtttcccttcccccgtcagt 24136461



 Score = 48.1 bits (24), Expect = 0.15
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 1501     aaaattaattcaggcttggttgtgggtggaag 1532
                |||||||||||||||||||| || ||||||||
Sbjct: 24139032 aaaattaattcaggcttggtggtcggtggaag 24139063



 Score = 48.1 bits (24), Expect = 0.15
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 1531     agacccctttactgcagcaaagggttactcaaggtcccaaaacc 1574
                ||||||||||| ||||||||||| || || ||||| ||||||||
Sbjct: 24139477 agacccctttattgcagcaaaggattgcttaaggttccaaaacc 24139520



 Score = 46.1 bits (23), Expect = 0.59
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 1300     gctgataaggaggggaagctggtgtatattcagaatcttgacatacggtttggagcttct 1359
                |||||| || ||||||  || ||||| ||||| ||||||||||||| ||||| |||| ||
Sbjct: 24137760 gctgatgagcaggggacacttgtgtacattcaaaatcttgacatacagtttgcagctgct 24137819

                       
Query: 1360     gaaatag 1366
                || ||||
Sbjct: 24137820 gacatag 24137826



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>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E03
          Length = 164839

 Score =  325 bits (164), Expect = 4e-85
 Identities = 326/380 (85%)
 Strand = Plus / Plus

                                                                          
Query: 171    aggcctatggtaagggcaaattgagctgcaagtggccattatcagaatgggtgaaagtaa 230
              |||| |||||| || ||| | |||||| |||||  ||||||||||||||| ||  |||||
Sbjct: 110674 aggcttatggtgagtgcacagtgagctacaagttaccattatcagaatggatggtagtaa 110733

                                                                          
Query: 231    cgagaatatccagttttcatggggaaataagagagcaaaaggtggtgccaagatggatac 290
               ||||||||||| || |||||||| || ||||||||||||||||||   |||||||||||
Sbjct: 110734 tgagaatatccaattctcatgggggaagaagagagcaaaaggtggtattaagatggatac 110793

                                                                          
Query: 291    acagttctatggttccttcacctttgacaatgtgaagtactcactgtatgactgtgtata 350
              |||||| ||||  |||||||| ||||||||||||||||||||||||||||||  ||||||
Sbjct: 110794 acagttttatgactccttcacatttgacaatgtgaagtactcactgtatgacaatgtata 110853

                                                                          
Query: 351    tctttttaaaaatggagaacctgaaccatacattggaaagatagtaaagatatggcagca 410
              ||||||||| | ||| ||  ||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 110854 tctttttaagagtggtgagtctgaaccttacattggaaagataataaagatatggcagca 110913

                                                                          
Query: 411    aaatgaagctaagaaagtaaagattctttggtttttcaccccggatgagatcagaaatta 470
              |||| | |||||||||||||||||||||||||||||   ||||||||||||  ||||  |
Sbjct: 110914 aaatcaggctaagaaagtaaagattctttggttttttctcccggatgagattcgaaaaca 110973

                                                                          
Query: 471    tttagaaggccccgtggtggagaatgagatatttcttgcttctggtgatggcactggcct 530
              ||||   ||||| ||  |||| || |||||||||||||||| |||||| |||  ||||||
Sbjct: 110974 tttaagtggccctgtaatggaaaaggagatatttcttgcttgtggtgaaggcgttggcct 111033

                                  
Query: 531    tgccgatatcaacccactgg 550
              ||| ||||||||||||||||
Sbjct: 111034 tgctgatatcaacccactgg 111053



 Score =  123 bits (62), Expect = 3e-24
 Identities = 143/170 (84%)
 Strand = Plus / Plus

                                                                          
Query: 549    ggaatctattgctggtaaatgcacagttgtttgcatttcaaaggatgaaaggaatcgcca 608
              |||| |||||| ||| |||||||| ||  ||||||||||||||||||| |||||||| ||
Sbjct: 111838 ggaagctattggtgggaaatgcactgtgctttgcatttcaaaggatgagaggaatcgtca 111897

                                                                          
Query: 609    gcctaccccaaaggaacaaacggtcgctgattatatcttctataggttttttgatgttgg 668
               ||| |||| | ||||| | |  | ||||||||||||||||| |||||||||||||||  
Sbjct: 111898 accttcccccagggaactagcaatggctgattatatcttctacaggttttttgatgttaa 111957

                                                                
Query: 669    aaactgcacactttctgagcaagtacctgagaaaattgtagggctggaag 718
               |  |||||||||||||| ||| ||||||||||||||| |||| ||||||
Sbjct: 111958 cagttgcacactttctgaacaattacctgagaaaattgcaggggtggaag 112007



 Score =  115 bits (58), Expect = 8e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1645   cagaagaaggcagtgtcgacatcacattgttctcaacccaacacaatagaatatgatctg 1704
              |||||||||||||| || || || ||||||||||||||||| ||||| || |||||| ||
Sbjct: 115491 cagaagaaggcagtttcaacctcgcattgttctcaacccaatacaatggagtatgatttg 115550

                                                
Query: 1705   gccttggattggatgcttgtccgagaaaagcaag 1738
              ||||||||||||||||||||||||| ||||||||
Sbjct: 115551 gccttggattggatgcttgtccgagcaaagcaag 115584



 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                          
Query: 1372   cttatacgtgaggcgctacaactgtcttgtactgctaagcctattaaccacccgacctac 1431
              ||||||||||| ||  |||||||   |||||  |||||||||||||||||||| || || 
Sbjct: 114631 cttatacgtgatgctttacaactaaattgtatcgctaagcctattaaccacccaacttat 114690

                               
Query: 1432   gatgatcctaacaatgg 1448
              |||||||| ||||||||
Sbjct: 114691 gatgatccaaacaatgg 114707



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 889    atggaggatgaaattcctgttgctgcagttcccctttcccagtcagt 935
              ||||||||||||| ||| |||||||||||| ||||| ||| ||||||
Sbjct: 112237 atggaggatgaaagtccagttgctgcagtttcccttcccccgtcagt 112283



 Score = 48.1 bits (24), Expect = 0.15
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 1501   aaaattaattcaggcttggttgtgggtggaag 1532
              |||||||||||||||||||| || ||||||||
Sbjct: 114854 aaaattaattcaggcttggtggtcggtggaag 114885



 Score = 48.1 bits (24), Expect = 0.15
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 1531   agacccctttactgcagcaaagggttactcaaggtcccaaaacc 1574
              ||||||||||| ||||||||||| || || ||||| ||||||||
Sbjct: 115299 agacccctttattgcagcaaaggattgcttaaggttccaaaacc 115342



 Score = 46.1 bits (23), Expect = 0.59
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 1300   gctgataaggaggggaagctggtgtatattcagaatcttgacatacggtttggagcttct 1359
              |||||| || ||||||  || ||||| ||||| ||||||||||||| ||||| |||| ||
Sbjct: 113582 gctgatgagcaggggacacttgtgtacattcaaaatcttgacatacagtttgcagctgct 113641

                     
Query: 1360   gaaatag 1366
              || ||||
Sbjct: 113642 gacatag 113648



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>gb|AY106082.1| Zea mays PCO136762 mRNA sequence
          Length = 832

 Score =  113 bits (57), Expect = 3e-21
 Identities = 147/177 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1398 ttgtactgctaagcctattaaccacccgacctacgatgatcctaacaatggaaaagcata 1457
            ||||||||| ||||| ||||||||||| || || |||||||| |||||||| ||||||||
Sbjct: 148  ttgtactgcgaagcccattaaccaccccacatatgatgatccaaacaatggcaaagcata 207

                                                                        
Query: 1458 tgttgtattcaaatctagaagtgctgctgatgaagctgttatgaaaattaattcaggctt 1517
            || | |||||| | ||| |  |||||||||||  ||  ||   ||||| ||||| || ||
Sbjct: 208  tgctatattcagaactaaagatgctgctgatgctgccatttcaaaaatcaattctggttt 267

                                                                     
Query: 1518 ggttgtgggtggaagacccctttactgcagcaaagggttactcaaggtcccaaaacc 1574
            |||||| |||||||| ||||| ||||||||||||||||||||  |||| ||||||||
Sbjct: 268  ggttgttggtggaaggcccctgtactgcagcaaagggttacttgaggttccaaaacc 324



 Score = 50.1 bits (25), Expect = 0.037
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1642 gagcagaagaaggcagtgtcgacatcacattgttctcaacccaacacaatagaatatgat 1701
            |||||||||||||| ||  | || || |||||||| || |||||||| || || || || 
Sbjct: 386  gagcagaagaaggctgtagcaacctcgcattgttcccagcccaacacgatcgagtacgac 445

                                                 
Query: 1702 ctggccttggattggatgcttgtccgagaaaagcaag 1738
             |||||||||| ||||||||| | || ||||||||||
Sbjct: 446  ttggccttggactggatgcttcttcgggaaaagcaag 482



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>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3,
             complete sequence
          Length = 97738

 Score = 58.0 bits (29), Expect = 2e-04
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 549   ggaatctattgctggtaaatgcacagttgtttgcatttcaaagga 593
             |||| |||||||||| |||||||  ||||||||||||||||||||
Sbjct: 39899 ggaagctattgctggaaaatgcaatgttgtttgcatttcaaagga 39855



 Score = 42.1 bits (21), Expect = 9.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 1666  tcacattgttctcaacccaacacaatagaatatgatctggc 1706
             |||||||||||||| |||||||  || ||||||||| ||||
Sbjct: 29316 tcacattgttctcagcccaacaacattgaatatgatatggc 29276



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>gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete sequence
          Length = 130703

 Score = 50.1 bits (25), Expect = 0.037
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 549    ggaatctattgctggtaaatgcacagttgtttgcatttcaaagga 593
              ||||||||||||||| |||||||   ||||||||||||| |||||
Sbjct: 128740 ggaatctattgctggaaaatgcaacattgtttgcatttctaagga 128784



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>gb|AC092966.6| Homo sapiens 3 BAC RP11-143P4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 138589

 Score = 46.1 bits (23), Expect = 0.59
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1509  ttcaggcttggttgtgggtggaa 1531
             |||||||||||||||||||||||
Sbjct: 41171 ttcaggcttggttgtgggtggaa 41193



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>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence
          Length = 191557

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1055   cacagagtacacagaaagtttt 1076
              ||||||||||||||||||||||
Sbjct: 110782 cacagagtacacagaaagtttt 110803



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>gb|AC091854.3| Homo sapiens chromosome 5 clone CTD-2293C22, complete sequence
          Length = 109538

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1449  aaaagcatatgttgtattcaaa 1470
             ||||||||||||||||||||||
Sbjct: 45349 aaaagcatatgttgtattcaaa 45328



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>gb|AC015890.9| Mus musculus chromosome 10, clone RP21-244O21, complete sequence
          Length = 160840

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1242   gcaggctgacagaagcaaatgg 1263
              ||||||||||||||||||||||
Sbjct: 140677 gcaggctgacagaagcaaatgg 140656



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>gb|AC025913.11| Mus musculus 10 BAC RP23-287L13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228124

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1242   gcaggctgacagaagcaaatgg 1263
              ||||||||||||||||||||||
Sbjct: 161481 gcaggctgacagaagcaaatgg 161460



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>gb|AC012302.5|AC012302 Mus musculus chromosome 10, clone RP21-247L16, complete sequence
          Length = 130427

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1242  gcaggctgacagaagcaaatgg 1263
             ||||||||||||||||||||||
Sbjct: 22721 gcaggctgacagaagcaaatgg 22700



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>gb|DQ119104.1| Aeromonas hydrophila FlaA (flaA), FlaB (flaB), FlaG (flaG), FlaH
             (flaH), FlaJ (flaJ), Maf-1 (maf-1), Maf-2 (maf-2), NeuB
             (neuB), FlmD (flmD), NeuA-like (neuA), FlmH (flmH), and
             3-oxoacyl-carrier-protein reductase genes, complete cds;
             and unknown genes
          Length = 15311

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2211  catctgctgccgctgctgcatg 2232
             ||||||||||||||||||||||
Sbjct: 12578 catctgctgccgctgctgcatg 12557



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>gb|AC149593.5| Mus musculus BAC clone RP23-34O23 from 7, complete sequence
          Length = 231000

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1177   cagaatatggcctcagttcctg 1198
              ||||||||||||||||||||||
Sbjct: 128971 cagaatatggcctcagttcctg 128992



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>ref|NR_003247.1| Mus musculus CEA-related cell adhesion molecule 1 (Ceacam-ps1) on
           chromosome 7
          Length = 908

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 935 tggccatttttcttcccccat 955
           |||||||||||||||||||||
Sbjct: 829 tggccatttttcttcccccat 809



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>dbj|AB251919.1| Bacteriophage phiK38-1 DNA, region around attP and integrase
          Length = 2400

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 cgcccccttcccccgcttctc 143
           |||||||||||||||||||||
Sbjct: 352 cgcccccttcccccgcttctc 332



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>gb|CP000312.1| Clostridium perfringens SM101, complete genome
          Length = 2897393

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 638     attatatcttctataggtttt 658
               |||||||||||||||||||||
Sbjct: 1712942 attatatcttctataggtttt 1712962



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>gb|AC187107.3| Gallus gallus BAC clone CH261-144B12 from chromosome z, complete sequence
          Length = 191067

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 917    ttcccctttcccagtcagtgg 937
              |||||||||||||||||||||
Sbjct: 101638 ttcccctttcccagtcagtgg 101618



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>ref|XM_001111621.1| PREDICTED: Macaca mulatta eukaryotic translation initiation factor
           4E nuclear import factor 1, transcript variant 7
           (EIF4ENIF1), mRNA
          Length = 3913

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 975 agctcaggttgctactgttcctctt 999
           ||||||||||||||||| |||||||
Sbjct: 85  agctcaggttgctactgctcctctt 109



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>gb|AC146541.2| Gasterosteus aculeatus clone CH213-33P7, complete sequence
          Length = 209797

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1462   gtattcaaatctagaagtgct 1482
              |||||||||||||||||||||
Sbjct: 205405 gtattcaaatctagaagtgct 205385



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>dbj|AB159669.1| Nemalionopsis tortuosa chloroplast tufA gene for elongation factor
            TU, partial cds
          Length = 1125

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 982  gttgctactgttcctcttccc 1002
            |||||||||||||||||||||
Sbjct: 693  gttgctactgttcctcttccc 673



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>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence
          Length = 217409

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2094   tgggaagtttctcatgacatatctt 2118
              ||||||||||||| |||||||||||
Sbjct: 140675 tgggaagtttctcttgacatatctt 140651



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>gb|AC025477.6| Homo sapiens chromosome 5 clone RP11-432A10, complete sequence
          Length = 154272

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1084   aagatgccttcaaagaagttg 1104
              |||||||||||||||||||||
Sbjct: 153880 aagatgccttcaaagaagttg 153900



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>emb|AL691523.6| Human DNA sequence from clone RP13-531C17 on chromosome 1 Contains the
             5' end of the gene for glycine- glutamate-
             thienylcyclohexylpiperidine-binding protein (KIAA0562),
             the DFFB gene for DNA fragmentation factor 40kDa beta
             polypeptide (caspase-activated DNase), the 3' end of the
             gene for a novel protein and three CpG islands, complete
             sequence
          Length = 69982

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1605  catcagtaatcagaaaatgaaccca 1629
             |||||||||||||||| ||||||||
Sbjct: 49518 catcagtaatcagaaattgaaccca 49494



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>gb|AC161379.2| Mus musculus BAC clone RP23-207P12 from chromosome 17, complete
             sequence
          Length = 189293

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 959   tcaaagaggaggataaagctcaggt 983
             |||||||| ||||||||||||||||
Sbjct: 73521 tcaaagagcaggataaagctcaggt 73545



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>gb|AC008859.5| Homo sapiens chromosome 5 clone CTD-2183N12, complete sequence
          Length = 120491

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1084   aagatgccttcaaagaagttg 1104
              |||||||||||||||||||||
Sbjct: 117141 aagatgccttcaaagaagttg 117121



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>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence
          Length = 170033

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1089   gccttcaaagaagttgaaatt 1109
              |||||||||||||||||||||
Sbjct: 138970 gccttcaaagaagttgaaatt 138950



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>emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chromosome 11 Contains part
              of a novel gene and two CpG islands, complete sequence
          Length = 205101

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1694   aatatgatctggccttggatt 1714
              |||||||||||||||||||||
Sbjct: 131007 aatatgatctggccttggatt 131027



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>gb|AC021646.35| Homo sapiens 12 BAC RP11-511B23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165089

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1488   tgaagctgttatgaaaattaa 1508
              |||||||||||||||||||||
Sbjct: 104372 tgaagctgttatgaaaattaa 104392



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>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence
          Length = 92216

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1666 tcacattgttctcaacccaacacaatagaatatgatctggc 1706
            |||||||||||||| |||||||  || ||||||||| ||||
Sbjct: 7217 tcacattgttctcagcccaacaacattgaatatgatatggc 7257



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>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence
          Length = 212403

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 568    tgcacagttgtttgcatttca 588
              |||||||||||||||||||||
Sbjct: 151797 tgcacagttgtttgcatttca 151777



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>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence
          Length = 198005

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 356    ttaaaaatggagaacctgaac 376
              |||||||||||||||||||||
Sbjct: 158293 ttaaaaatggagaacctgaac 158313



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>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18,
              complete sequence
          Length = 182116

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 568    tgcacagttgtttgcatttca 588
              |||||||||||||||||||||
Sbjct: 126495 tgcacagttgtttgcatttca 126515



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>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete
             sequence
          Length = 151688

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1052  gtacacagagtacacagaaag 1072
             |||||||||||||||||||||
Sbjct: 37524 gtacacagagtacacagaaag 37544



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>emb|AL645524.8| Mouse DNA sequence from clone RP23-35D7 on chromosome 11, complete
             sequence
          Length = 210163

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 424   aaagtaaagattctttggtttttca 448
             |||| ||||||||||||||||||||
Sbjct: 37121 aaaggaaagattctttggtttttca 37145



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>emb|AL732459.5| Mouse DNA sequence from clone RP23-115J4 on chromosome X, complete
             sequence
          Length = 201897

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 508   gcttctggtgatggcactggc 528
             |||||||||||||||||||||
Sbjct: 48397 gcttctggtgatggcactggc 48417



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>gb|M94581.1|SMOBNHE Trout sodium-hydrogen exchange protein beta mRNA, complete cds
          Length = 2490

 Score = 42.1 bits (21), Expect = 9.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1351 ggagcttctgaaatagtggaa 1371
            |||||||||||||||||||||
Sbjct: 2408 ggagcttctgaaatagtggaa 2388


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 455,624,137
Number of extensions: 24748645
Number of successful extensions: 134803
Number of sequences better than 10.0: 38
Number of HSP's gapped: 134791
Number of HSP's successfully gapped: 65
Length of query: 2387
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2364
Effective length of database: 18,503,978,556
Effective search space: 43743405306384
Effective search space used: 43743405306384
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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