ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf51g23 |
|---|---|
| Clone Library Name | barley_pub |
>P11768:PAT3_SOLTU Patatin class 1 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 296 bits (758), Expect = 2e-79 Identities = 169/398 (42%), Positives = 243/398 (61%), Gaps = 3/398 (0%) Frame = +2 Query: 170 APTCVTCPPPSQGQLITVLSIDGGGIRGLIPSTILACLESKLQELDG-PDARIADYFDVI 346 A T TC + ++TVLSIDGGGI+G+IP+ IL LE +LQE+D DAR+ADYFDVI Sbjct: 16 ATTSSTCAKLEE--MVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVI 73 Query: 347 AGTSTGALVASMLAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVN 526 GTSTG L+ +M+ P EN RP AKDI FY ++GP IF N G++ Sbjct: 74 GGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------------NYSGSII 121 Query: 527 GPKYDGKFLHDKIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLS 706 GP YDGK+L ++ + + Q +T + + +FDIK +PVIF P +A + Sbjct: 122 GPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMY 181 Query: 707 DICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA-ANNPTMAAMSMITKEVLRR 883 DIC ST+AAP YFP HYF TH G++ E++L+DGGVA +P + ++S+ T+ + + Sbjct: 182 DICYSTAAAPIYFPPHYFITHTSNGDI--YEFNLVDGGVATVGDPALLSLSVATR-LAQE 238 Query: 884 NPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKWGVLRWLYDGGFTPLIDVFSH 1060 +P F+ K DY L++S+GTG+ + +K YTA E AKWG LRW+ + + + Sbjct: 239 DPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWM-----LAIQQMTNA 293 Query: 1061 ASADMVDIHAAVLFEALRIEENYLRIQDDSLTGQTSSVDIATKENMEALIGIGKNLLTKT 1240 AS+ M D + + +F+A + NYLR+Q+++LTG T+ +D A++ NME L+ +G+ LL K Sbjct: 294 ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKP 353 Query: 1241 VSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLR 1354 VS+ D T EEAL RFAK LS+ +KLR Sbjct: 354 VSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
>P07745:PAT0_SOLTU Patatin precursor - Solanum tuberosum (Potato)| Length = 386 Score = 295 bits (756), Expect = 3e-79 Identities = 168/398 (42%), Positives = 244/398 (61%), Gaps = 3/398 (0%) Frame = +2 Query: 170 APTCVTCPPPSQGQLITVLSIDGGGIRGLIPSTILACLESKLQELDG-PDARIADYFDVI 346 A T TC + G+++TVLSIDGGGI+G+IP+ IL LE +LQE+D DAR+ADYFDVI Sbjct: 16 ATTSSTCA--TLGEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVI 73 Query: 347 AGTSTGALVASMLAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVN 526 GTSTG L+ +M+ P EN RP AKDI FY ++GP IF N G++ Sbjct: 74 GGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------------NYSGSIF 121 Query: 527 GPKYDGKFLHDKIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLS 706 GP+YDGK+L ++ + + Q +T + + +FDIK +PVIF P +A + Sbjct: 122 GPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMY 181 Query: 707 DICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA-ANNPTMAAMSMITKEVLRR 883 DIC ST+AAP YFP H+F TH N + E++L+DG VA +P + ++S+ T+ + + Sbjct: 182 DICYSTAAAPIYFPPHHFVTH--TSNGATYEFNLVDGAVATVGDPALLSLSVATR-LAQD 238 Query: 884 NPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKWGVLRWLYDGGFTPLIDVFSH 1060 +P F+ K DY L++S+GTG+ + +K YTA E AKWG LRW+ + + + Sbjct: 239 DPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNA 293 Query: 1061 ASADMVDIHAAVLFEALRIEENYLRIQDDSLTGQTSSVDIATKENMEALIGIGKNLLTKT 1240 AS+ M D + + +F+A + NYLR+Q+++LTG T+ +D A++ NME L+ +G+ LL K Sbjct: 294 ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKP 353 Query: 1241 VSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLR 1354 VS+ D T EEAL RFAK LS+ +KLR Sbjct: 354 VSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
>P15478:PAT5_SOLTU Patatin T5 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 295 bits (754), Expect = 5e-79 Identities = 165/386 (42%), Positives = 241/386 (62%), Gaps = 3/386 (0%) Frame = +2 Query: 206 GQLITVLSIDGGGIRGLIPSTILACLESKLQELDG-PDARIADYFDVIAGTSTGALVASM 382 G+++TVLSIDGGGI+G+IP+TIL LE +LQE+D DAR+ADYFDVI GTSTG L+ +M Sbjct: 26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAM 85 Query: 383 LAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVNGPKYDGKFLHDK 562 + P E RP AKDI FY ++GPKIF G++ GPKYDGK+L Sbjct: 86 ITTPNETNRPFAAAKDIVPFYFEHGPKIFQSS------------GSIFGPKYDGKYLMQV 133 Query: 563 IKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLSDICISTSAAPTY 742 ++ + + Q +T + + +FDIK +PVIF P +A + DIC ST+AAPT+ Sbjct: 134 LQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTF 193 Query: 743 FPAHYFTTHDPAGNLSDREYHLIDGGVA-ANNPTMAAMSMITKEVLRRNPDFTHGKPADY 919 FP HYF T+ G+ E++L+DG VA ++P + ++S+ TK + + +P F K +Y Sbjct: 194 FPPHYFATNTSNGD--KYEFNLVDGAVATVDDPALLSISVATK-LAQVDPKFASIKSLNY 250 Query: 920 NNYLIISIGTGSAKQAEK-YTAPECAKWGVLRWLYDGGFTPLIDVFSHASADMVDIHAAV 1096 L++S+GTG+ + +K YTA E AKWG RW+ + + S AS+ M D + + Sbjct: 251 KQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWM-----LVIQKMTSAASSYMTDYYLST 305 Query: 1097 LFEALRIEENYLRIQDDSLTGQTSSVDIATKENMEALIGIGKNLLTKTVSRVNIDNGMYE 1276 F+AL + NYLR+Q+++LTG T+ +D A++ NM+ L+ +G++LL K+VS+ Sbjct: 306 AFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSK--------- 356 Query: 1277 TVDGAGTNEEALVRFAKRLSEERKLR 1354 D T EEAL RFAK LS+ +KLR Sbjct: 357 --DNPETYEEALKRFAKLLSDRKKLR 380
>P15476:PAT1_SOLTU Patatin B1 precursor - Solanum tuberosum (Potato)| Length = 377 Score = 291 bits (746), Expect = 4e-78 Identities = 167/398 (41%), Positives = 241/398 (60%), Gaps = 3/398 (0%) Frame = +2 Query: 170 APTCVTCPPPSQGQLITVLSIDGGGIRGLIPSTILACLESKLQELDG-PDARIADYFDVI 346 A T TC + ++TVLSIDGGGI+G+IP+ IL LE +LQE+D DAR+ADYFDVI Sbjct: 7 ATTSSTCAKLEE--MVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVI 64 Query: 347 AGTSTGALVASMLAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVN 526 GTSTG L+ +M+ P EN RP AKDI FY ++GP IF N G++ Sbjct: 65 GGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------------NYSGSIF 112 Query: 527 GPKYDGKFLHDKIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLS 706 GP+YDGK+L ++ + + Q +T + + +FDIK +PVIF P +A + Sbjct: 113 GPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMY 172 Query: 707 DICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA-ANNPTMAAMSMITKEVLRR 883 DIC S +AAP YFP H+F TH N + E++L+DGGVA +P + ++S+ T+ + + Sbjct: 173 DICYSIAAAPIYFPPHHFVTH--TSNGATYEFNLVDGGVATVGDPALLSLSVATR-LAQE 229 Query: 884 NPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKWGVLRWLYDGGFTPLIDVFSH 1060 +P F+ K DY L++S+GTG+ + +K YTA E AKWG LRW+ + + + Sbjct: 230 DPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQLTNA 284 Query: 1061 ASADMVDIHAAVLFEALRIEENYLRIQDDSLTGQTSSVDIATKENMEALIGIGKNLLTKT 1240 AS+ M D + + +F+A + NYLR+Q+++LTG T+ +D A++ NME L+ +G+ LL K Sbjct: 285 ASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKP 344 Query: 1241 VSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLR 1354 VS+ D T EEAL RFAK LS +KLR Sbjct: 345 VSK-----------DSPETYEEALKRFAKLLSNRKKLR 371
>P15477:PAT2_SOLTU Patatin B2 precursor - Solanum tuberosum (Potato)| Length = 386 Score = 289 bits (739), Expect = 3e-77 Identities = 166/398 (41%), Positives = 240/398 (60%), Gaps = 3/398 (0%) Frame = +2 Query: 170 APTCVTCPPPSQGQLITVLSIDGGGIRGLIPSTILACLESKLQELDG-PDARIADYFDVI 346 A T TC + ++TVLSIDGGGI+G+IP+ IL LE +LQE+D DAR+ADYFDVI Sbjct: 16 ATTSSTCAKLEE--MVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVI 73 Query: 347 AGTSTGALVASMLAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVN 526 GTSTG L+ +M+ P EN RP AKDI FY ++GP IF N G++ Sbjct: 74 GGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------------NYSGSIL 121 Query: 527 GPKYDGKFLHDKIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLS 706 GP YDGK+L ++ + + Q +T + + +FDIK +PVIF P +A + Sbjct: 122 GPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMY 181 Query: 707 DICISTSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVA-ANNPTMAAMSMITKEVLRR 883 DIC ST+AAP YFP H+F TH N + E++L+DG VA +P + ++S+ T+ + + Sbjct: 182 DICYSTAAAPIYFPPHHFVTH--TSNGARYEFNLVDGAVATVGDPALLSLSVATR-LAQE 238 Query: 884 NPDFTHGKPADYNNYLIISIGTGSAKQAEK-YTAPECAKWGVLRWLYDGGFTPLIDVFSH 1060 +P F+ K DY L++S+GTG+ + +K YTA E AKWG LRW+ + + + Sbjct: 239 DPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNA 293 Query: 1061 ASADMVDIHAAVLFEALRIEENYLRIQDDSLTGQTSSVDIATKENMEALIGIGKNLLTKT 1240 AS+ M D + + +F+A + NYLR+Q+++L G T+ +D A++ NME L+ +G+ LL K Sbjct: 294 ASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKP 353 Query: 1241 VSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLR 1354 VS+ D T EEAL RFAK LS+ +KLR Sbjct: 354 VSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
>O60733:PA2G6_HUMAN 85 kDa calcium-independent phospholipase A2 - Homo sapiens (Human)| Length = 806 Score = 48.5 bits (114), Expect = 8e-05 Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 14/262 (5%) Frame = +2 Query: 221 VLSIDGGGIRGLIPSTILACLESKLQELDGPDARIADYFDVIAGTSTGALVA-------S 379 +L +DGGG++GLI +L +E D FD +AGTSTG ++A S Sbjct: 480 LLCLDGGGVKGLIIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILALAILHSKS 533 Query: 380 MLAAPGENKRPLFQAKDINKFYLDNGPKIFPQRSWGFLTPIGNLFGAVNGPKYDGKFLHD 559 M G R + ++ Y + F +R +G T + + V PK Sbjct: 534 MAYMRGMYFRMKDEVFRGSRPYESGPLEEFLKREFGEHTKMTD----VRKPKV------- 582 Query: 560 KIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLSDICI-----ST 724 LT ++ Q + +D + V + V+ A SD + S+ Sbjct: 583 ---MLTGTLSDRQPAELHLFRNYDAP--ETVREPRFNQNVNLRPPAQPSDQLVWRAARSS 637 Query: 725 SAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMITKEVLRRNPDFTHG 904 AAPTYF P G +DGG+ ANNPT+ AM+ E+ N D Sbjct: 638 GAAPTYF--------RPNG-------RFLDGGLLANNPTLDAMT----EIHEYNQDLIRK 678 Query: 905 KPADYNNYL--IISIGTGSAKQ 964 A+ L ++S+GTG + Q Sbjct: 679 GQANKVKKLSIVVSLGTGRSPQ 700
>P97570:PA2G6_RAT 85 kDa calcium-independent phospholipase A2 - Rattus norvegicus| (Rat) Length = 751 Score = 37.7 bits (86), Expect = 0.13 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = +2 Query: 221 VLSIDGGGIRGLIPSTILACLESKLQELDGPDARIADYFDVIAGTSTGALVA 376 +L +DGGG++GL+ +L +E D FD +AGTSTG ++A Sbjct: 425 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILA 470 Score = 35.8 bits (81), Expect = 0.51 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +2 Query: 719 STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 889 S+ AAPTYF P G +DGG+ ANNPT+ AM+ I ++++R+ Sbjct: 581 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 625 Query: 890 DFTHGKPADYNNYLIISIGTGSAKQ 964 K + +++S+GTG + Q Sbjct: 626 GNKVKKLS-----IVVSLGTGKSPQ 645
>P97819:PA2G6_MOUSE 85 kDa calcium-independent phospholipase A2 - Mus musculus (Mouse)| Length = 752 Score = 37.7 bits (86), Expect = 0.13 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = +2 Query: 221 VLSIDGGGIRGLIPSTILACLESKLQELDGPDARIADYFDVIAGTSTGALVA 376 +L +DGGG++GL+ +L +E D FD +AGTSTG ++A Sbjct: 426 LLCLDGGGVKGLVIIQLLIAIEK------ASGVATKDLFDWVAGTSTGGILA 471 Score = 35.8 bits (81), Expect = 0.51 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Frame = +2 Query: 719 STSAAPTYFPAHYFTTHDPAGNLSDREYHLIDGGVAANNPTMAAMSMI---TKEVLRRNP 889 S+ AAPTYF P G +DGG+ ANNPT+ AM+ I ++++R+ Sbjct: 582 SSGAAPTYFR--------PNGRF-------LDGGLLANNPTLDAMTEIHEYNQDMIRKGQ 626 Query: 890 DFTHGKPADYNNYLIISIGTGSAKQ 964 K + +++S+GTG + Q Sbjct: 627 GNKVKKLS-----IVVSLGTGKSPQ 646
>Q8R349:CDC16_MOUSE Cell division cycle protein 16 homolog - Mus musculus (Mouse)| Length = 620 Score = 36.6 bits (83), Expect = 0.30 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +2 Query: 536 YDGKFLHDKIKSLTHDVTIAQTVTNIIVPTFDIKFLQPVIFNTYEARVDPLKNA 697 Y G + DK+K DV +T+ NII P +D + + NT EA + PL+N+ Sbjct: 533 YIGADIKDKLKCYDFDVHTMKTLKNIISPPWDFRDFEVEKQNTEEAGLAPLQNS 586
>P36165:TGL4_YEAST Lipase 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 910 Score = 36.2 bits (82), Expect = 0.39 Identities = 51/195 (26%), Positives = 78/195 (40%), Gaps = 9/195 (4%) Frame = +2 Query: 218 TVLSIDGGGIRGLIPSTILACLESKLQELDGPDARIADYFDVIAGTSTGALVASMLAAPG 397 T L + GGG GL +L L ELD VI+G+S GA+VAS+L+ Sbjct: 280 TALVLSGGGTFGLFHIGVLGTLF----ELDLLPR-------VISGSSAGAIVASILSVHH 328 Query: 398 ENKRPLFQAKDINK---FYLDNGPKIFPQRSWGFLTPIGNLFGAVNGPKYDGKFLHDKIK 568 + + P+ ++K + D+ K S L I F NG +D K L + + Sbjct: 329 KEEIPVLLNHILDKEFNIFKDDKQK---SESENLLIKISRFF--KNGTWFDNKHLVNTMI 383 Query: 569 SLTHDVTIAQT------VTNIIVPTFDIKFLQPVIFNTYEARVDPLKNAHLSDICISTSA 730 D+T + + NI V + F QP + N A N + ++ + Sbjct: 384 EFLGDLTFREAYNRTGKILNITVSPASL-FEQPRLLNNLTA-----PNVLIWSAVCASCS 437 Query: 731 APTYFPAHYFTTHDP 775 P FP+ DP Sbjct: 438 LPGIFPSSPLYEKDP 452
>P47752:EDG5_RAT Sphingosine 1-phosphate receptor Edg-5 - Rattus norvegicus (Rat)| Length = 352 Score = 32.7 bits (73), Expect = 4.3 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -2 Query: 1341 SSESLLAKRTSASSLVPAPSTVSYIPLSMFTRDTVLVSRFLPIPISASMFSLVAISTE 1168 +S+ L A++L+ P T+S PL F R+ S F I +SAS+FSL+AI+ E Sbjct: 77 ASDLLAGVAFVANTLLSGPVTLSLTPLQWFAREG---SAF--ITLSASVFSLLAIAIE 129
>Q741G7:RPOZ_MYCPA DNA-directed RNA polymerase omega chain - Mycobacterium| paratuberculosis Length = 108 Score = 32.0 bits (71), Expect = 7.4 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = -1 Query: 544 AVVLGTVHGAEQVPDWGQESPAPLWEYLGPVVEVKLVDVLGLEERPLVLAGGRQHG 377 A+V+ A Q+ D+ + + EY+GP+VE GL+E+PL +A HG Sbjct: 50 ALVIYAAKRARQINDYYNQLGEGILEYVGPLVEP------GLQEKPLSIALREIHG 99 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 204,316,049 Number of extensions: 4374272 Number of successful extensions: 14094 Number of sequences better than 10.0: 12 Number of HSP's gapped: 14047 Number of HSP's successfully gapped: 15 Length of query: 522 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 404 Effective length of database: 68,319,629 Effective search space: 27601130116 Effective search space used: 27601130116 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
