No.
Definition
Score (bits)
E Value
1 ref|NM_001074800.1| Oryza sativa (japonica cultivar-group) Os11g...
333
1e-87
2 dbj|AK058531.1| Oryza sativa (japonica cultivar-group) cDNA clon...
333
1e-87
3 gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster
272
4e-69
4 gb|DQ246021.1| Zea mays clone 80006 mRNA sequence
268
6e-68
5 ref|NM_001074801.1| Oryza sativa (japonica cultivar-group) Os11g...
258
5e-65
6 dbj|AK067827.1| Oryza sativa (japonica cultivar-group) cDNA clon...
250
1e-62
7 gb|AY105282.1| Zea mays PCO126203 mRNA sequence
228
5e-56
8 gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome...
159
4e-35
9 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
159
4e-35
10 dbj|AK109768.1| Oryza sativa (japonica cultivar-group) cDNA clon...
143
2e-30
11 ref|NM_001068578.1| Oryza sativa (japonica cultivar-group) Os08g...
137
1e-28
12 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
137
1e-28
13 dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D...
137
1e-28
14 dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clon...
137
1e-28
15 emb|CT828114.1| Oryza sativa (indica cultivar-group) cDNA clone:...
131
8e-27
16 ref|NM_001056822.1| Oryza sativa (japonica cultivar-group) Os03g...
121
8e-24
17 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
121
8e-24
18 gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom...
121
8e-24
19 dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clon...
121
8e-24
20 ref|NM_001068577.1| Oryza sativa (japonica cultivar-group) Os08g...
113
2e-21
21 dbj|AK101432.1| Oryza sativa (japonica cultivar-group) cDNA clon...
113
2e-21
22 ref|NM_001068213.1| Oryza sativa (japonica cultivar-group) Os08g...
111
8e-21
23 dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D...
111
8e-21
24 dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic D...
111
8e-21
25 ref|NM_001073512.1| Oryza sativa (japonica cultivar-group) Os12g...
70
3e-08
26 dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
3e-08
27 dbj|AK243595.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
66
4e-07
28 ref|NM_001068579.1| Oryza sativa (japonica cultivar-group) Os08g...
66
4e-07
29 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
66
4e-07
30 emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298...
66
4e-07
31 emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa...
66
4e-07
32 emb|CT835976.1| Oryza sativa (indica cultivar-group) cDNA clone:...
50
0.024
33 emb|CT835975.1| Oryza sativa (indica cultivar-group) cDNA clone:...
50
0.024
34 dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.024
35 dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
48
0.097
36 ref|NM_001056121.1| Oryza sativa (japonica cultivar-group) Os03g...
46
0.38
37 gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome...
46
0.38
38 emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...
44
1.5
39 gb|AC134878.3| Homo sapiens BAC clone RP11-131M6 from Y, complet...
44
1.5
40 gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, comple...
44
1.5
41 emb|AL671532.13| Human DNA sequence from clone RP11-512A4 on chr...
44
1.5
42 gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple...
44
1.5
43 ref|XM_001223747.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
6.0
44 ref|NM_001067334.1| Oryza sativa (japonica cultivar-group) Os08g...
42
6.0
45 emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se...
42
6.0
46 emb|CT009588.1| Triticum turgidum
42
6.0
47 emb|CT009585.1| Triticum aestivum
42
6.0
48 gb|CP000384.1| Mycobacterium sp. MCS, complete genome
42
6.0
49 gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
42
6.0
50 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
42
6.0
51 gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
42
6.0
52 gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp...
42
6.0
53 gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com...
42
6.0
54 ref|XM_389356.1| Gibberella zeae PH-1 chromosome 4 hypothetical ...
42
6.0
55 gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome...
42
6.0
56 gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g...
42
6.0
57 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
42
6.0
58 emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome
42
6.0
59 emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ...
42
6.0
60 emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ...
42
6.0
61 gb|AF223364.1|AF223364 Myxococcus xanthus tRNA/rRNA methyltransf...
42
6.0
62 ref|NM_001017596.1| Danio rerio zgc:110298 (zgc:110298), mRNA >g...
42
6.0
63 emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, OR...
42
6.0
64 dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...
42
6.0
65 dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic D...
42
6.0
66 dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic D...
42
6.0
67 dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D...
42
6.0
68 dbj|AK119294.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
6.0
69 gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ...
42
6.0
70 emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on ch...
42
6.0
71 gb|AC147240.3| Mus musculus BAC clone RP23-398F20 from 10, compl...
42
6.0
>gb|AF061282.1 | Sorghum bicolor 22 kDa kafirin cluster
Length = 162249
Score = 272 bits (137), Expect = 4e-69
Identities = 273/317 (86%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 797 gagtaccacctcatcgacggcggcgtggccgccaacaaccccaccatggccgccatgtcc 856
|||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 73476 gagtaccacctcgtcgacggcggcgtggcggccaacaaccccaccatgatcgccatgtcc 73535
Query: 857 atgatcaccaaggaggtgctgcgccgcaaccccgacttcacgcacggcaagcccgccgat 916
||| |||| ||||||||||| ||| | ||||| ||||||| | ||| |||||| ||||
Sbjct: 73536 atgctcacaaaggaggtgctccgcgggaacccggacttcaaccccggtaagcccaccgag 73595
Query: 917 tacaacaactacctcatcatctccatcggcaccgggtccgccaag-caggccgagaagta 975
||| ||||||||| |||||||| |||| || |||||||||||| | |||||||||||
Sbjct: 73596 taccggaactacctcgtcatctccgtcgggacagggtccgccaagtctcgccgagaagta 73655
Query: 976 caccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggcggcttcac 1035
||||||||| ||||||||||||||||| || ||| ||||||||||| ||||| |||||
Sbjct: 73656 caccgcgccgcagtgcgccaagtggggcctcatccagtggctctacgagggcgggttcac 73715
Query: 1036 cccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccacgccgccgt 1095
||| |||||||| ||||||| || || ||||||||||||||||||||||| ||||||||
Sbjct: 73716 ccccatcatcgacatcttctcgcacgccagcgccgacatggtcgacatccatgccgccgt 73775
Query: 1096 cctatttgaggccctcc 1112
|| || ||||||||||
Sbjct: 73776 gctcttcgaggccctcc 73792
Score = 264 bits (133), Expect = 9e-67
Identities = 244/281 (86%)
Strand = Plus / Minus
Query: 197 ccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccgcggcctc 256
|||||| ||||| ||||||||||| | || |||||||||||||||||||||||||||||
Sbjct: 43084 ccgtcgaaggggaagctcatcacgattctgagcatcgacggcggcggcatccgcggcctt 43025
Query: 257 atcccctccaccatcctcgcctgcctcgagtccaagctccaggagctggacgggccggac 316
||||| | |||||| |||| | ||||||| |||||||||||||||||||||| || |||
Sbjct: 43024 atcccggcgaccatcatcgcatacctcgaggccaagctccaggagctggacggcccagac 42965
Query: 317 gcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcg 376
|| |||||||| |||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 42964 gcacgcatcgccgactacttcgacgtgatcgccgggacgagcaccggcgccctgctcacg 42905
Query: 377 tccatgctggcggcccccggcgagaacaagcggccgctcttccaggccaaggacatcaac 436
|||||||||||||| |||| ||| ||||| |||||||| ||| ||||||||| ||| |
Sbjct: 42904 tccatgctggcggcgcccgacgacaacaaccggccgctgttcgccgccaaggacctcacc 42845
Query: 437 aagttttacctcgacaacgggcccaagatattcccacagag 477
| || |||||||| ||||| ||||| || |||||||||||
Sbjct: 42844 accttctacctcgagaacggccccaaaatcttcccacagag 42804
Score = 254 bits (128), Expect = 8e-64
Identities = 286/336 (85%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 797 gagtaccacctcatcgacggcggcgtggccgccaacaaccccaccatggccgccatgtcc 856
|||| ||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||
Sbjct: 57151 gagttccacctcgtcgacggcggcgtcgcggccaacaaccccaccatggtcgccatgtcc 57210
Query: 857 atgatcaccaaggaggtgctgcgccgcaaccccgacttc-acgcacggcaagcccgccga 915
||| |||||||||||||||| |||||||||||||||||| |||| ||||| |||| ||||
Sbjct: 57211 atgctcaccaaggaggtgctccgccgcaaccccgacttcaacgc-cggcaggcccaccga 57269
Query: 916 ttacaacaactacctcatcatctccatcggcaccgggtccgccaagcaggccgagaagta 975
|||| |||||||||||||||||| | || || ||||| ||||||||||||||||||||
Sbjct: 57270 gtacaccaactacctcatcatctctgttgggactgggtcggccaagcaggccgagaagta 57329
Query: 976 caccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggcggcttcac 1035
||||||||| ||||||| || ||||| | | | ||||||||| |||| || |||||
Sbjct: 57330 caccgcgccgcagtgcgcgaaatggggactgattcagtggctctacaacggtggattcac 57389
Query: 1036 cccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccacgccgccgt 1095
||| |||||||| ||||||||||||| || | |||||||| |||||||| || |||||
Sbjct: 57390 tccgatcatcgacatcttctcccatgccagttctgacatggttgacatccatgcggccgt 57449
Query: 1096 cctatttgaggccctccgcattgaggagaactacct 1131
|| ||||||||||| | | |||| ||||||||||
Sbjct: 57450 gctctttgaggccctgcactgtgagaagaactacct 57485
Score = 236 bits (119), Expect = 2e-58
Identities = 206/235 (87%)
Strand = Plus / Plus
Query: 527 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtc 586
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 56887 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctcacccacgacgtc 56946
Query: 587 accatcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaa 646
| | || | || ||||||||||||||||| || | |||||| |||||| ||||||
Sbjct: 56947 aaggtggcggacacggtcaccaacatcatcgtgccggcgttcgacgtcaagtacctgcag 57006
Query: 647 cccgtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctcc 706
||| |||||||| |||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 57007 cccatcatcttctccacgtacgaggccaaggccgacacgctcaagaacgcgcacctctcc 57066
Query: 707 gacatctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
||||||||||||||||| || || ||||||||||| ||||||||||||| |||||
Sbjct: 57067 gacatctgcatcagcacgtcggcggcgcccacctatttccccgcgcacttcttca 57121
Score = 212 bits (107), Expect = 3e-51
Identities = 227/267 (85%)
Strand = Plus / Plus
Query: 210 agctcatcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccacca 269
||||||||||| | ||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 56154 agctcatcacgattctcagcatcgatggcggcggcatccgcggcctcatcccggcgacca 56213
Query: 270 tcctcgcctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcgg 329
|| |||| ||||||| ||||||| |||||||||||||| || || || || || || |
Sbjct: 56214 tcatcgcacacctcgaggccaagctgcaggagctggacggcccagatgctcggattgccg 56273
Query: 330 actacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcgg 389
||||||||||||||||||||||||||||||||||||| ||| || |||| ||||||||||
Sbjct: 56274 actacttcgacgtgatcgccgggacgagcaccggcgccctgctcacgtcgatgctggcgg 56333
Query: 390 cccccggcgagaacaagcggccgctcttccaggccaaggacatcaacaagttttacctcg 449
| |||| ||| ||||| |||||||| ||| ||||||||| ||| || || |||||||
Sbjct: 56334 cgcccgacgacaacaaccggccgctgttctccgccaaggacctcaccaccttctacctcg 56393
Query: 450 acaacgggcccaagatattcccacaga 476
| ||||| ||||| || ||||||||||
Sbjct: 56394 agaacggccccaaaattttcccacaga 56420
Score = 204 bits (103), Expect = 7e-49
Identities = 202/235 (85%)
Strand = Plus / Minus
Query: 527 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtc 586
|||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||
Sbjct: 42659 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgacgtc 42600
Query: 587 accatcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaa 646
| | || | || ||||||||||||||||| || | |||||| |||||| ||||||
Sbjct: 42599 aaggtggcggacacggtcaccaacatcatcgtgccggcgttcgacgtcaagtacctgcag 42540
Query: 647 cccgtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctcc 706
||| |||||||| |||||||||||||| | ||| | |||||||||||||||||||||
Sbjct: 42539 cccatcatcttctccacgtacgaggccaagaccgacgccctcaagaacgcgcacctctcc 42480
Query: 707 gacatctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
||||||||||||||||| || || ||||||||||||||||| ||||||| |||||
Sbjct: 42479 gacatctgcatcagcacgtcggcggcgcccacctacttcccggcgcacttcttca 42425
Score = 186 bits (94), Expect = 2e-43
Identities = 160/182 (87%)
Strand = Plus / Plus
Query: 296 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 355
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 72885 caggagctggacgggccggacgcacgcatcgccgactacttcgacgtgatcgccgggacg 72944
Query: 356 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 415
||||||||||||||| | |||| ||||||||||| |||| |||||||| |||||||||
Sbjct: 72945 agcaccggcgcgctgctgacgtcgatgctggcggcgcccgacgagaacaggcggccgctg 73004
Query: 416 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 475
||| ||||||||| ||| || || |||||||| ||||| ||||| || |||||||||
Sbjct: 73005 ttcgccgccaaggacctcaccaccttctacctcgagaacggccccaacatcttcccacag 73064
Query: 476 ag 477
||
Sbjct: 73065 ag 73066
Score = 182 bits (92), Expect = 3e-42
Identities = 200/236 (84%)
Strand = Plus / Plus
Query: 527 ggtcccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtc 586
|||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||
Sbjct: 73200 ggtcccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgacgtg 73259
Query: 587 accatcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaa 646
||||| | || |||||||||||| | || || | |||||| |||||| ||||||
Sbjct: 73260 cggatcgcggacacggtcaccaacatcgtggtgccggcgttcgacgtcaagtacctgcag 73319
Query: 647 cccgtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctcc 706
|| |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 73320 ccgatcatcttctccacgtacgaggccaagaccgacgcgctgaagaacgcgcacctctcc 73379
Query: 707 gacatctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttcac 762
||||||||||||||||| || || ||||| ||||||||||| ||||||||||||||
Sbjct: 73380 gacatctgcatcagcacgtcggcggcgccgacctacttcccggcgcactacttcac 73435
Score = 165 bits (83), Expect = 6e-37
Identities = 276/338 (81%), Gaps = 3/338 (0%)
Strand = Plus / Minus
Query: 797 gagtaccacctcatcgacggcggcgtggccgccaacaaccccaccatggccgccatgtcc 856
|||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 42395 gagtaccacctcgtcgacggcggcgtcgccgccaacaaccccaccatggtcgccatgtcc 42336
Query: 857 atgatcaccaaggaggtgctgcgccgcaaccccgacttc-acg--cacggcaagcccgcc 913
||| ||||||||||||||| || || ||||| |||||| ||| ||||| ||| |
Sbjct: 42335 atgctcaccaaggaggtgcaccgtcggaacccggacttcaacgtcgtcggcaggccgacg 42276
Query: 914 gattacaacaactacctcatcatctccatcggcaccgggtccgccaagcaggccgagaag 973
|| |||| |||||||||| |||||||| |||| || ||||| ||||||||||| ||||||
Sbjct: 42275 gagtacaccaactacctcgtcatctccgtcgggacggggtcggccaagcaggcggagaag 42216
Query: 974 tacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggcggcttc 1033
|||||||| ||||||| || ||||| | | | ||||||||| |||| || |||
Sbjct: 42215 tacaccgctgagcagtgcgcgaaatgggggctgattcagtggctctaccacggtggattc 42156
Query: 1034 accccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccacgccgcc 1093
|| ||| |||||||| ||||||| ||||| || |||||||||| |||||||| || ||
Sbjct: 42155 acgccgatcatcgacatcttctcacatgccagttccgacatggttgacatccatgcatcc 42096
Query: 1094 gtcctatttgaggccctccgcattgaggagaactacct 1131
|| || ||| ||||||| | | |||| ||||||||||
Sbjct: 42095 gtgctctttcaggccctgcactgtgagaagaactacct 42058
Score = 101 bits (51), Expect = 7e-18
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 197 ccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccgcggcctc 256
|||||||||||| ||||||||| || || |||||||| |||||||||||||| || |||
Sbjct: 72686 ccgtcgcaggggaggctcatcaccgttctgagcatcgatggcggcggcatccgggggctc 72745
Query: 257 atcccctccaccatcctcgcctgcctcgagtccaagctccagg 299
||||| |||||||| || ||||||||||| ||||||||||||
Sbjct: 72746 atccctgccaccatcatcacctgcctcgagaccaagctccagg 72788
Score = 65.9 bits (33), Expect = 4e-07
Identities = 165/209 (78%)
Strand = Plus / Plus
Query: 1164 cgtcctcggtggatatcgccaccaaagagaacatggaggcgcttattgggatcggtaaga 1223
|||| |||||||| ||||| || || |||||||||||||| || ||||||||||| ||||
Sbjct: 73975 cgtcgtcggtggacatcgcgacgaaggagaacatggaggcactgattgggatcgggaaga 74034
Query: 1224 atctgctcaccaagaccgtatcccgggtaaacattgacaatgggatgtatgagaccgtcg 1283
| || || | ||| | || | | || ||||| |||| |||||||| ||| ||||||
Sbjct: 74035 agcttctgaagaagccggtggcgagagtgaacatcgacacggggatgtacgagcccgtcg 74094
Query: 1284 acggtgctggcaccaatgaagaggcgctcgtccgcttcgccaagaggctctccgaggagc 1343
||| | ||||| || || || ||||| | ||||||||||||| ||||||||| ||||
Sbjct: 74095 ccggcgagggcacaaacgaggacgcgcttgcgcgcttcgccaagatgctctccgacgagc 74154
Query: 1344 gcaagctgcgccaaaccaacctcaactcc 1372
| | ||| ||||| ||||||||||||||
Sbjct: 74155 ggaggctacgccaggccaacctcaactcc 74183
Score = 46.1 bits (23), Expect = 0.38
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1172 gtggatatcgccaccaaagagaacatggaggcgcttattgggatcgg 1218
||||| ||||| ||||| |||||||||||| | || |||||||||||
Sbjct: 41913 gtggacatcgcgaccaaggagaacatggagtctctgattgggatcgg 41867
>gb|DQ246021.1 | Zea mays clone 80006 mRNA sequence
Length = 1534
Score = 268 bits (135), Expect = 6e-68
Identities = 257/295 (87%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 793 ccgcgagtaccacctcatcgacggcggcgtggccgccaacaaccccaccatggccgccat 852
|||||||||||||||| | ||||||||||| || ||||||||||||||||||| ||||||
Sbjct: 741 ccgcgagtaccacctcgtggacggcggcgtcgcggccaacaaccccaccatggtcgccat 800
Query: 853 gtccatgatcaccaaggaggtgctgcgccgcaaccccgacttc-acgcacggcaagcccg 911
||||||| ||||||||||||||| |||||||||||| ||||| |||| ||||| |||
Sbjct: 801 gtccatgctcaccaaggaggtgcaccgccgcaaccccaacttcaacgc-cggcagcccca 859
Query: 912 ccgattacaacaactacctcatcatctccatcggcaccgggtccgccaagcaggccgaga 971
|||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||
Sbjct: 860 ccgagtacaccaactacctcatcatctccgtcggcaccgggtcggccaagcaggcggaga 919
Query: 972 agtacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggcggct 1031
||||||||||| ||||||| ||||||||| || ||| ||||||||| |||||||||
Sbjct: 920 agtacaccgcggagcagtgcgcgaagtggggcctcatccagtggctctacaacggcggct 979
Query: 1032 tcaccccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatcca 1086
|||| || |||||||| ||||||| ||||| || |||||||||| ||||||||
Sbjct: 980 tcacgcctatcatcgacatcttctcgcatgccagttccgacatggttgacatcca 1034
Score = 236 bits (119), Expect = 2e-58
Identities = 230/267 (86%)
Strand = Plus / Plus
Query: 210 agctcatcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccacca 269
||||||||||| | || |||||||| |||||||||||||||||||| ||||| | ||||
Sbjct: 161 agctcatcacgatcctgagcatcgatggcggcggcatccgcggccttatcccggcgacca 220
Query: 270 tcctcgcctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcgg 329
|| | || | ||||||| |||||||||||||||||||||| |||||||| || ||||| |
Sbjct: 221 tcattgcgtacctcgaggccaagctccaggagctggacggcccggacgctcggatcgccg 280
Query: 330 actacttcgacgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcgg 389
|||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||
Sbjct: 281 actacttcgacgtgattgccgggacgagcaccggcgccctgctcgcgtcgatgctggcgg 340
Query: 390 cccccggcgagaacaagcggccgctcttccaggccaaggacatcaacaagttttacctcg 449
| || | ||||||||| |||||||| ||| ||||||||| ||| || ||| |||||||
Sbjct: 341 cgccggacgagaacaaccggccgctgttcgccgccaaggacctcaccacgttctacctcg 400
Query: 450 acaacgggcccaagatattcccacaga 476
| ||||| || ||||| ||||||||||
Sbjct: 401 agaacggcccaaagatcttcccacaga 427
Score = 174 bits (88), Expect = 6e-40
Identities = 196/232 (84%)
Strand = Plus / Plus
Query: 530 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 589
||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||
Sbjct: 481 cccaagtacgacggcgtgttcctgcacgacaagatcaagagcctgacgcacgacgtcagg 540
Query: 590 atcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaaccc 649
| || | || || |||||| ||||||| || | |||||| |||||| |||||| |||
Sbjct: 541 gtggcggacacggtgaccaacgtcatcgtgccggcgttcgacgtcaagtacctgcagccc 600
Query: 650 gtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctccgac 709
|||||||| ||||||||||||| | ||| | ||||||||||||||||||||||||
Sbjct: 601 atcatcttctcgacgtacgaggccaagaccgacgccctcaagaacgcgcacctctccgac 660
Query: 710 atctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
|||||||||||||| || || ||||||||||||||||| ||||||| |||||
Sbjct: 661 atctgcatcagcacgtcggcggcgcccacctacttcccggcgcacttcttca 712
Score = 44.1 bits (22), Expect = 1.5
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1172 gtggatatcgccaccaaagagaacatggag 1201
||||| ||||||||||| ||||||||||||
Sbjct: 1120 gtggacatcgccaccaaggagaacatggag 1149
Score = 42.1 bits (21), Expect = 6.0
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1318 cttcgccaagaggctctccgaggagcgcaagct 1350
||||||||||| |||||| || |||||||||||
Sbjct: 1266 cttcgccaagaagctctctgacgagcgcaagct 1298
>gb|AC120885.3 | Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBa0042J05, complete sequence
Length = 150295
Score = 159 bits (80), Expect = 4e-35
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 530 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 589
|||||||| |||||| |||| |||||||||||||||||||||| |||||||| || |||
Sbjct: 20869 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 20928
Query: 590 atcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaaccc 649
|| ||| | || |||||||||||| |||| || | || || |||||| |||||||||
Sbjct: 20929 attgccgacacagtcaccaacatcgtcgtgccagcatttgatgtcaagtatctgcaaccc 20988
Query: 650 gtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctccgac 709
|||||||| ||| |||||||||| | || || ||||||||||| ||||||||||||
Sbjct: 20989 atcatcttctccacctacgaggccaagaacgagcccctcaagaacgcccacctctccgac 21048
Query: 710 atctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
|||||||||||||| || || |||||||| ||||||| |||||||| |||||
Sbjct: 21049 atctgcatcagcacgtcagcggcgcccacttacttcctcgcgcacttcttca 21100
Score = 153 bits (77), Expect = 2e-33
Identities = 158/185 (85%)
Strand = Plus / Plus
Query: 296 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 355
|||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct: 7315 caggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacg 7374
Query: 356 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 415
|||||||| |||||| || |||||||||||||||| || | ||| || ||||||||||
Sbjct: 7375 agcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctc 7434
Query: 416 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 475
||| ||| ||| ||| ||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 7435 ttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcag 7494
Query: 476 aggag 480
||||
Sbjct: 7495 cggag 7499
Score = 143 bits (72), Expect = 2e-30
Identities = 150/176 (85%)
Strand = Plus / Plus
Query: 296 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 355
|||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||
Sbjct: 15642 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 15701
Query: 356 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 415
|||||||| |||||| || |||| ||||||||||| || | ||| ||| || ||||||
Sbjct: 15702 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 15761
Query: 416 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 471
||| ||| | ||| ||| |||||| |||||||| |||||||||||||| |||||
Sbjct: 15762 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 15817
Score = 139 bits (70), Expect = 3e-29
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 190 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 249
|||||| |||| |||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 6844 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 6903
Query: 250 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 299
|||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 6904 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccagg 6953
Score = 131 bits (66), Expect = 8e-27
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 968 gagaagtacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggc 1027
||||||||||||||||| | |||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 9256 gagaagtacaccgcgccggcatgcgccaaatggggtgtgctccggtggctctatgacggc 9315
Query: 1028 ggcttcaccccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccac 1087
||||||||||| ||||||||| ||||| | |||||||| || ||||||||||||||||||
Sbjct: 9316 ggcttcaccccactcatcgacatcttcactcatgctagtgctgacatggtcgacatccac 9375
Query: 1088 gc 1089
||
Sbjct: 9376 gc 9377
Score = 123 bits (62), Expect = 2e-24
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 190 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 249
|||||| |||| |||||| ||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 14224 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 14283
Query: 250 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 299
||||||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 14284 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 14333
Score = 103 bits (52), Expect = 2e-18
Identities = 109/128 (85%)
Strand = Plus / Plus
Query: 968 gagaagtacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggc 1027
|||||||||||||| || | ||||| || ||||| || ||||| |||||||||||| ||
Sbjct: 21523 gagaagtacaccgcaccggcatgcgcgaaatggggtgtactccggtggctctacgacagc 21582
Query: 1028 ggcttcaccccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccac 1087
||||||||||| ||||||||| ||||| |||||| || || |||||||||||||||||
Sbjct: 21583 ggcttcaccccactcatcgacatcttcagccatgcaagtgcagacatggtcgacatccat 21642
Query: 1088 gccgccgt 1095
||| ||||
Sbjct: 21643 gcctccgt 21650
Score = 87.7 bits (44), Expect = 1e-13
Identities = 185/232 (79%)
Strand = Plus / Plus
Query: 530 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 589
||||||||||| ||| |||| |||| ||||||||||||||||| || || ||||| |||
Sbjct: 8585 cccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttacc 8644
Query: 590 atcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaaccc 649
||| | | || |||||||||||| | || || | ||||| |||| | | | ||||||
Sbjct: 8645 atctcaaacacggtcaccaacatcgttgtaccggctttcgatgtcaaatacttacaaccc 8704
Query: 650 gtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctccgac 709
||||||| ||| || ||||||| | || || |||||||| || ||||||||||||
Sbjct: 8705 atcatcttttccacctatgaggccaagaatgagcccctcaagaatgcccacctctccgac 8764
Query: 710 atctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
||||| |||||||| || || ||||| || |||||||||||||||| |||||
Sbjct: 8765 atctgtatcagcacgtcagcagcgccgacatacttccccgcgcacttcttca 8816
Score = 54.0 bits (27), Expect = 0.002
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1156 ggggcaaacgtcctcggtggatatcgccaccaaagagaacatggaggcgcttattgggat 1215
|||||| ||||| |||||||||||||| || | |||||||||||||| || || |||||
Sbjct: 22397 ggggcacacgtcgtcggtggatatcgcgacggaggagaacatggaggcactgatcgggat 22456
Query: 1216 cgg 1218
|||
Sbjct: 22457 cgg 22459
Score = 48.1 bits (24), Expect = 0.097
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1156 ggggcaaacgtcctcggtggatatcgccaccaaagagaacatggaggc 1203
|||||| ||||| |||||||| ||||| || || ||||||||||||||
Sbjct: 10094 ggggcacacgtcgtcggtggacatcgcgacgaaggagaacatggaggc 10141
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 159 bits (80), Expect = 4e-35
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 530 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 589
|||||||| |||||| |||| |||||||||||||||||||||| |||||||| || |||
Sbjct: 23004866 cccaagtatgacggctcgttcttgcacgacaagatcaagagccttacccacgatgtgacc 23004925
Query: 590 atcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaaccc 649
|| ||| | || |||||||||||| |||| || | || || |||||| |||||||||
Sbjct: 23004926 attgccgacacagtcaccaacatcgtcgtgccagcatttgatgtcaagtatctgcaaccc 23004985
Query: 650 gtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctccgac 709
|||||||| ||| |||||||||| | || || ||||||||||| ||||||||||||
Sbjct: 23004986 atcatcttctccacctacgaggccaagaacgagcccctcaagaacgcccacctctccgac 23005045
Query: 710 atctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
|||||||||||||| || || |||||||| ||||||| |||||||| |||||
Sbjct: 23005046 atctgcatcagcacgtcagcggcgcccacttacttcctcgcgcacttcttca 23005097
Score = 153 bits (77), Expect = 2e-33
Identities = 158/185 (85%)
Strand = Plus / Plus
Query: 296 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 355
|||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct: 22991312 caggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacg 22991371
Query: 356 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 415
|||||||| |||||| || |||||||||||||||| || | ||| || ||||||||||
Sbjct: 22991372 agcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctc 22991431
Query: 416 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattcccacag 475
||| ||| ||| ||| ||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 22991432 ttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcag 22991491
Query: 476 aggag 480
||||
Sbjct: 22991492 cggag 22991496
Score = 143 bits (72), Expect = 2e-30
Identities = 150/176 (85%)
Strand = Plus / Plus
Query: 296 caggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacg 355
|||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||
Sbjct: 22999639 caggagctggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacg 22999698
Query: 356 agcaccggcgcgctggtcgcgtccatgctggcggcccccggcgagaacaagcggccgctc 415
|||||||| |||||| || |||| ||||||||||| || | ||| ||| || ||||||
Sbjct: 22999699 agcaccggggcgctgatcacgtcgatgctggcggcgccggacgacaaccggcaaccgctc 22999758
Query: 416 ttccaggccaaggacatcaacaagttttacctcgacaacgggcccaagatattccc 471
||| ||| | ||| ||| |||||| |||||||| |||||||||||||| |||||
Sbjct: 22999759 ttcgccgccgacgacctcaccaagttctacctcgagaacgggcccaagatcttccc 22999814
Score = 139 bits (70), Expect = 3e-29
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 190 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 249
|||||| |||| |||||| ||||||||| ||||| |||||||||||||||||||||||
Sbjct: 22990841 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccg 22990900
Query: 250 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 299
|||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 22990901 cggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccagg 22990950
Score = 131 bits (66), Expect = 8e-27
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 968 gagaagtacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggc 1027
||||||||||||||||| | |||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 22993253 gagaagtacaccgcgccggcatgcgccaaatggggtgtgctccggtggctctatgacggc 22993312
Query: 1028 ggcttcaccccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccac 1087
||||||||||| ||||||||| ||||| | |||||||| || ||||||||||||||||||
Sbjct: 22993313 ggcttcaccccactcatcgacatcttcactcatgctagtgctgacatggtcgacatccac 22993372
Query: 1088 gc 1089
||
Sbjct: 22993373 gc 22993374
Score = 123 bits (62), Expect = 2e-24
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 190 cccgcccccgtcgcaggggcagctcatcacggtgctcagcatcgacggcggcggcatccg 249
|||||| |||| |||||| ||||||||| ||||| ||||||||||||||| |||||||
Sbjct: 22998221 cccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcagcatccg 22998280
Query: 250 cggcctcatcccctccaccatcctcgcctgcctcgagtccaagctccagg 299
||||||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 22998281 cggcctcgtcccggccaccatcctcgcctgcctcgaggccaagctccagg 22998330
Score = 103 bits (52), Expect = 2e-18
Identities = 109/128 (85%)
Strand = Plus / Plus
Query: 968 gagaagtacaccgcgcccgagtgcgccaagtggggcgtcctccgctggctctacgacggc 1027
|||||||||||||| || | ||||| || ||||| || ||||| |||||||||||| ||
Sbjct: 23005520 gagaagtacaccgcaccggcatgcgcgaaatggggtgtactccggtggctctacgacagc 23005579
Query: 1028 ggcttcaccccgctcatcgacgtcttctcccatgctagcgccgacatggtcgacatccac 1087
||||||||||| ||||||||| ||||| |||||| || || |||||||||||||||||
Sbjct: 23005580 ggcttcaccccactcatcgacatcttcagccatgcaagtgcagacatggtcgacatccat 23005639
Query: 1088 gccgccgt 1095
||| ||||
Sbjct: 23005640 gcctccgt 23005647
Score = 87.7 bits (44), Expect = 1e-13
Identities = 185/232 (79%)
Strand = Plus / Plus
Query: 530 cccaagtacgacggcaagttcctgcacgacaagatcaagagcctcacccacgacgtcacc 589
||||||||||| ||| |||| |||| ||||||||||||||||| || || ||||| |||
Sbjct: 22992582 cccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttacc 22992641
Query: 590 atcgcccagaccgtcaccaacatcatcgtccccaccttcgacatcaagttcctgcaaccc 649
||| | | || |||||||||||| | || || | ||||| |||| | | | ||||||
Sbjct: 22992642 atctcaaacacggtcaccaacatcgttgtaccggctttcgatgtcaaatacttacaaccc 22992701
Query: 650 gtcatcttcaacacgtacgaggccagggtggacccgctcaagaacgcgcacctctccgac 709
||||||| ||| || ||||||| | || || |||||||| || ||||||||||||
Sbjct: 22992702 atcatcttttccacctatgaggccaagaatgagcccctcaagaatgcccacctctccgac 22992761
Query: 710 atctgcatcagcacctccgccgcgcccacctacttccccgcgcactacttca 761
||||| |||||||| || || ||||| || |||||||||||||||| |||||
Sbjct: 22992762 atctgtatcagcacgtcagcagcgccgacatacttccccgcgcacttcttca 22992813
Score = 54.0 bits (27), Expect = 0.002
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1156 ggggcaaacgtcctcggtggatatcgccaccaaagagaacatggaggcgcttattgggat 1215
|||||| ||||| |||||||||||||| || | |||||||||||||| || || |||||
Sbjct: 23006394 ggggcacacgtcgtcggtggatatcgcgacggaggagaacatggaggcactgatcgggat 23006453
Query: 1216 cgg 1218
|||
Sbjct: 23006454 cgg 23006456
Score = 48.1 bits (24), Expect = 0.097
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1156 ggggcaaacgtcctcggtggatatcgccaccaaagagaacatggaggc 1203
|||||| ||||| |||||||| ||||| || || ||||||||||||||
Sbjct: 22994091 ggggcacacgtcgtcggtggacatcgcgacgaaggagaacatggaggc 22994138
>dbj|AP008214.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
Length = 28434780
Score = 137 bits (69), Expect = 1e-28
Identities = 135/157 (85%)
Strand = Plus / Minus
Query: 216 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 275
|||| ||||| |||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 23497737 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 23497678
Query: 276 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 335
|| |||||||| ||||| ||| |||| ||||| | |||||| | ||||| |||||||
Sbjct: 23497677 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 23497618
Query: 336 tcgacgtgatcgccgggacgagcaccggcgcgctggt 372
||||||| |||||||||||||||||||||| ||||||
Sbjct: 23497617 tcgacgtaatcgccgggacgagcaccggcgggctggt 23497581
Score = 113 bits (57), Expect = 2e-21
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 216 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 275
|||| ||||| |||||||||||||||||| | |||||| ||||||| |||||||||||
Sbjct: 23487026 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 23486967
Query: 276 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 335
| | ||| ||| || || |||||||||||||| || || || || |||| ||||||
Sbjct: 23486966 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 23486907
Query: 336 tcgacgtgatcgccgggacgagcaccggcgcgctggt 372
|||||||||||||||||||||||||||||| ||||||
Sbjct: 23486906 tcgacgtgatcgccgggacgagcaccggcgggctggt 23486870
Score = 111 bits (56), Expect = 8e-21
Identities = 149/180 (82%)
Strand = Plus / Plus
Query: 219 cggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 278
||||||| |||||||||||||||||| | ||||| ||||||| |||||||| || |
Sbjct: 17656545 cggtgctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgt 17656604
Query: 279 gcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactacttcg 338
||| ||| ||||| ||||||||||||||||||| ||| | | |||||||||||||
Sbjct: 17656605 tcctggaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcg 17656664
Query: 339 acgtgatcgccgggacgagcaccggcgcgctggtcgcgtccatgctggcggcccccggcg 398
|||| ||||||||||||||||| |||| |||||| || ||||||| ||||| |||||||
Sbjct: 17656665 acgtcatcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcccggcg 17656724
Score = 56.0 bits (28), Expect = 4e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 603 tcaccaacatcatcgtccccaccttcgacatcaagttcct 642
||||||||||| ||||||| ||||||||||||||| ||||
Sbjct: 23486651 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 23486612
Score = 50.1 bits (25), Expect = 0.024
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 716 atcagcacctccgccgcgcccacctacttccccgcgcacta 756
||||||||||||||||| || |||| |||||| ||||||||
Sbjct: 23540018 atcagcacctccgccgcaccgaccttcttcccggcgcacta 23539978
Score = 50.1 bits (25), Expect = 0.024
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 323 atcgcggactacttcgacgtgatcgccgggacgagcaccgg 363
||||| |||||||||||||| ||||||| |||||||||||
Sbjct: 23541035 atcgctgactacttcgacgtcgtcgccggcacgagcaccgg 23540995
Score = 48.1 bits (24), Expect = 0.097
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 603 tcaccaacatcatcgtccccaccttcgacatcaagttcct 642
|||||||| || || |||||||||||||||||||| ||||
Sbjct: 23497251 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 23497212
Score = 48.1 bits (24), Expect = 0.097
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 227 agcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcct 278
|||||||||||||||||| || | || ||||||| |||||||||||||||
Sbjct: 23541226 agcatcgacggcggcggcgtcagagggatcatcccggccaccatcctcgcct 23541175
Score = 44.1 bits (22), Expect = 1.5
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 804 acctcatcgacggcggcgtggccgccaacaaccc 837
||||| ||||||||||||| ||||| ||||||||
Sbjct: 23496967 acctcgtcgacggcggcgtcgccgcgaacaaccc 23496934
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 348 ccgggacgagcaccggcgcgc 368
|||||||||||||||||||||
Sbjct: 365508 ccgggacgagcaccggcgcgc 365488
>dbj|AP004154.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1111_E05
Length = 126978
Score = 137 bits (69), Expect = 1e-28
Identities = 135/157 (85%)
Strand = Plus / Minus
Query: 216 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 275
|||| ||||| |||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 89152 tcaccgtgctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcg 89093
Query: 276 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 335
|| |||||||| ||||| ||| |||| ||||| | |||||| | ||||| |||||||
Sbjct: 89092 ccagcctcgaggagaagctgcagaagctagacggcgccgacgcgaggatcgccgactact 89033
Query: 336 tcgacgtgatcgccgggacgagcaccggcgcgctggt 372
||||||| |||||||||||||||||||||| ||||||
Sbjct: 89032 tcgacgtaatcgccgggacgagcaccggcgggctggt 88996
Score = 113 bits (57), Expect = 2e-21
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 216 tcacggtgctcagcatcgacggcggcggcatccgcggcctcatcccctccaccatcctcg 275
|||| ||||| |||||||||||||||||| | |||||| ||||||| |||||||||||
Sbjct: 78441 tcaccgtgctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcg 78382
Query: 276 cctgcctcgagtccaagctccaggagctggacgggccggacgcgcgcatcgcggactact 335
| | ||| ||| || || |||||||||||||| || || || || |||| ||||||
Sbjct: 78381 cgttcctggaggagaaactgcaggagctggacggccccgaggctcggctcgccaactact 78322
Query: 336 tcgacgtgatcgccgggacgagcaccggcgcgctggt 372
|||||||||||||||||||||||||||||| ||||||
Sbjct: 78321 tcgacgtgatcgccgggacgagcaccggcgggctggt 78285
Score = 56.0 bits (28), Expect = 4e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 603 tcaccaacatcatcgtccccaccttcgacatcaagttcct 642
||||||||||| ||||||| ||||||||||||||| ||||
Sbjct: 78066 tcaccaacatcgtcgtcccgaccttcgacatcaagctcct 78027
Score = 48.1 bits (24), Expect = 0.097
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 603 tcaccaacatcatcgtccccaccttcgacatcaagttcct 642
|||||||| || || |||||||||||||||||||| ||||
Sbjct: 88666 tcaccaacgtcgtcatccccaccttcgacatcaagctcct 88627
Score = 44.1 bits (22), Expect = 1.5
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 804 acctcatcgacggcggcgtggccgccaacaaccc 837
||||| ||||||||||||| ||||| ||||||||
Sbjct: 88382 acctcgtcgacggcggcgtcgccgcgaacaaccc 88349
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 121 bits (61), Expect = 8e-24
Identities = 134/158 (84%), Gaps = 9/158 (5%)
Strand = Plus / Plus
Query: 683 ccgctcaagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctac 742
|||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 15670145 ccgctcaagaacgcgctcctctccgacatctgcatcagcacatccgcggcgccgacctac 15670204
Query: 743 ttccccgcgcactacttc---accacccacgaccccgccgggaacctctccgaccgcgag 799
|||||||||||| |||| |||||| ||||| || |||| || || ||||||
Sbjct: 15670205 ctccccgcgcactgcttccagaccaccgacgacgccaccggcaaggtc------cgcgag 15670258
Query: 800 taccacctcatcgacggcggcgtggccgccaacaaccc 837
| | ||||||||||||||||||| ||||||||||||||
Sbjct: 15670259 ttcgacctcatcgacggcggcgtcgccgccaacaaccc 15670296
Score = 119 bits (60), Expect = 3e-23
Identities = 117/136 (86%)
Strand = Plus / Plus
Query: 230 atcgacggcggcggcatccgcggcctcatcccctccaccatcctcgcctgcctcgagtcc 289
|||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| ||
Sbjct: 15669526 atcgacggcggcggcatcaggggcctcatcccgggcaccatcctcgccttcctcgaggcc 15669585
Query: 290 aagctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgcc 349
| ||| ||||||||||| || || ||||||||| |||| || ||||||||| ||||||
Sbjct: 15669586 aggctgcaggagctggatggccccgacgcgcgcctcgccgattacttcgactgcatcgcc 15669645
Query: 350 gggacgagcaccggcg 365
||||| ||||||||||
Sbjct: 15669646 gggaccagcaccggcg 15669661
Score = 46.1 bits (23), Expect = 0.38
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 311 ccggacgcgcgcatcgcggactacttcgacgtgatcgccgggacgagcaccggcg 365
|||||||| ||| ||||||||||||||||| | ||||||| ||| || ||||||
Sbjct: 8122075 ccggacgcccgcgtcgcggactacttcgacctcgtcgccggtacgggcgccggcg 8122129
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1076 gtcgacatccacgccgccgtc 1096
|||||||||||||||||||||
Sbjct: 15670645 gtcgacatccacgccgccgtc 15670665
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
Length = 27566993
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaa 834
||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 22360440 cgcgagtacaacctcatcgacggcggcgtcgccgccaacaa 22360400
Score = 63.9 bits (32), Expect = 2e-06
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 689 aagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctacttcccc 748
|||||||||| ||||||||| |||||||| |||| || || ||||| || ||| |||||
Sbjct: 22360542 aagaacgcgcggctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctcccc 22360483
Query: 749 gcgcactacttc 760
||||||||||||
Sbjct: 22360482 gcgcactacttc 22360471
Score = 63.9 bits (32), Expect = 2e-06
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaaccc 837
||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 22452014 cgcgagtacaacctcatcgacggcggtgtcgccgccaacaaccc 22452057
Score = 58.0 bits (29), Expect = 1e-04
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaa 834
||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 22406503 cgcgagtacaacctcatcgacggcggcgtcgctgccaacaa 22406543
Score = 56.0 bits (28), Expect = 4e-04
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 291 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 350
|||||||| ||||||| ||||| || ||| | | || |||||||||||| |||||||
Sbjct: 22405909 agctccagcagctggatgggccagaggcgaggctggccgactacttcgactacatcgccg 22405968
Query: 351 ggacgagcaccggcgcgctg 370
||||||||||||||| ||||
Sbjct: 22405969 ggacgagcaccggcgggctg 22405988
Score = 56.0 bits (28), Expect = 4e-04
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 689 aagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctacttcccc 748
|||||||||| ||||||||| |||||||| |||| || || ||||| || ||| |||||
Sbjct: 22406404 aagaacgcgctgctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctcccc 22406463
Query: 749 gcgcactacttc 760
||||||| ||||
Sbjct: 22406464 gcgcactgcttc 22406475
Score = 50.1 bits (25), Expect = 0.024
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 229 catcgacggcggcggcatccgcggcctcatccc 261
||||||||||||||||||||| ||| |||||||
Sbjct: 22451015 catcgacggcggcggcatccgaggcgtcatccc 22451047
Score = 48.1 bits (24), Expect = 0.097
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 291 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 350
|||||||| |||||||||||| || ||| | | || |||||||||||| |||||||
Sbjct: 22361029 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 22360970
Query: 351 ggacgagcaccggcgcgctg 370
| ||||||||||||| ||||
Sbjct: 22360969 gcacgagcaccggcgggctg 22360950
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1068 ccgacatggtcgacatccacg 1088
|||||||||||||||||||||
Sbjct: 22360054 ccgacatggtcgacatccacg 22360034
>emb|AL731741.5 |CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 109610
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaa 834
||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1314 cgcgagtacaacctcatcgacggcggcgtcgccgccaacaa 1354
Score = 63.9 bits (32), Expect = 2e-06
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 689 aagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctacttcccc 748
|||||||||| ||||||||| |||||||| |||| || || ||||| || ||| |||||
Sbjct: 1212 aagaacgcgcggctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctcccc 1271
Query: 749 gcgcactacttc 760
||||||||||||
Sbjct: 1272 gcgcactacttc 1283
Score = 48.1 bits (24), Expect = 0.097
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 291 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 350
|||||||| |||||||||||| || ||| | | || |||||||||||| |||||||
Sbjct: 725 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 784
Query: 351 ggacgagcaccggcgcgctg 370
| ||||||||||||| ||||
Sbjct: 785 gcacgagcaccggcgggctg 804
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 ccgacatggtcgacatccacg 1088
|||||||||||||||||||||
Sbjct: 1700 ccgacatggtcgacatccacg 1720
>emb|AL732640.4 |CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 183414
Score = 65.9 bits (33), Expect = 4e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaa 834
||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 147094 cgcgagtacaacctcatcgacggcggcgtcgccgccaacaa 147134
Score = 63.9 bits (32), Expect = 2e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaaccc 837
||||||||| |||||||||||||||| || ||||||||||||||
Sbjct: 55520 cgcgagtacaacctcatcgacggcggtgtcgccgccaacaaccc 55477
Score = 63.9 bits (32), Expect = 2e-06
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 689 aagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctacttcccc 748
|||||||||| ||||||||| |||||||| |||| || || ||||| || ||| |||||
Sbjct: 146992 aagaacgcgcggctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctcccc 147051
Query: 749 gcgcactacttc 760
||||||||||||
Sbjct: 147052 gcgcactacttc 147063
Score = 58.0 bits (29), Expect = 1e-04
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 794 cgcgagtaccacctcatcgacggcggcgtggccgccaacaa 834
||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 101031 cgcgagtacaacctcatcgacggcggcgtcgctgccaacaa 100991
Score = 56.0 bits (28), Expect = 4e-04
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 689 aagaacgcgcacctctccgacatctgcatcagcacctccgccgcgcccacctacttcccc 748
|||||||||| ||||||||| |||||||| |||| || || ||||| || ||| |||||
Sbjct: 101130 aagaacgcgctgctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctcccc 101071
Query: 749 gcgcactacttc 760
||||||| ||||
Sbjct: 101070 gcgcactgcttc 101059
Score = 56.0 bits (28), Expect = 4e-04
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 291 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 350
|||||||| ||||||| ||||| || ||| | | || |||||||||||| |||||||
Sbjct: 101625 agctccagcagctggatgggccagaggcgaggctggccgactacttcgactacatcgccg 101566
Query: 351 ggacgagcaccggcgcgctg 370
||||||||||||||| ||||
Sbjct: 101565 ggacgagcaccggcgggctg 101546
Score = 50.1 bits (25), Expect = 0.024
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 229 catcgacggcggcggcatccgcggcctcatccc 261
||||||||||||||||||||| ||| |||||||
Sbjct: 56519 catcgacggcggcggcatccgaggcgtcatccc 56487
Score = 48.1 bits (24), Expect = 0.097
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 291 agctccaggagctggacgggccggacgcgcgcatcgcggactacttcgacgtgatcgccg 350
|||||||| |||||||||||| || ||| | | || |||||||||||| |||||||
Sbjct: 146505 agctccagcggctggacgggccagatgcgaggctggccgactacttcgactacatcgccg 146564
Query: 351 ggacgagcaccggcgcgctg 370
| ||||||||||||| ||||
Sbjct: 146565 gcacgagcaccggcgggctg 146584
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1068 ccgacatggtcgacatccacg 1088
|||||||||||||||||||||
Sbjct: 147480 ccgacatggtcgacatccacg 147500
>emb|AJ620477.1 | Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12,
ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3,
tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene,
tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19,
ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain An
d48
Length = 82868
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 826 cgccaacaaccccaccatggc 846
|||||||||||||||||||||
Sbjct: 71044 cgccaacaaccccaccatggc 71024
>gb|AC147240.3 | Mus musculus BAC clone RP23-398F20 from 10, complete sequence
Length = 195921
Score = 42.1 bits (21), Expect = 6.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1460 attatgatttatgattgtttt 1480
|||||||||||||||||||||
Sbjct: 83838 attatgatttatgattgtttt 83818
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 207,381,187
Number of extensions: 11009463
Number of successful extensions: 256071
Number of sequences better than 10.0: 71
Number of HSP's gapped: 256040
Number of HSP's successfully gapped: 202
Length of query: 1567
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1544
Effective length of database: 18,503,978,556
Effective search space: 28570142890464
Effective search space used: 28570142890464
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)