| Clone Name | FLbaf48g14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831103.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI213L04, full insert sequence Length = 1960 Score = 525 bits (265), Expect = e-145 Identities = 418/469 (89%) Strand = Plus / Plus Query: 657 ggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgtg 716 |||||| |||||||||||| |||||||||| ||||||||||| ||||| || | |||||| Sbjct: 1202 ggttgcctctgttatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtg 1261 Query: 717 gacagaagcccttaacaaacggctgggaaccaagggccttgatctacctgaaatcatagt 776 || ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 1262 gaaagaagcccttaacaaacggcttggaactaagggtcttgatctacctgaaatcatagt 1321 Query: 777 ggaatcagagaaacgcgggatgacatttgacaaattgctaacaattcctgagaaagataa 836 |||||||||||| || ||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1322 ggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataa 1381 Query: 837 atgggtctatactgatggccagtcagcatcttgtgtggcctacgtcctaatgatgtacaa 896 ||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1382 gtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaa 1441 Query: 897 ggaggccggactctttgaaccaatttccagctctatagaagtcacagagttcacgataaa 956 |||||| ||||||||||| |||||| |||||||||||||||| || || ||||| ||||| Sbjct: 1442 ggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccataaa 1501 Query: 957 agatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtggtgcaa 1016 ||||||||||| ||| ||||| || || |||||||||||| ||||| | ||||||||| Sbjct: 1502 agatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaa 1561 Query: 1017 caaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaatggaact 1076 |||||| |||| ||| ||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 1562 caaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagtt 1621 Query: 1077 gcctgggtacaacgccatggaaccatacgctcacatgaatgaaaggtgt 1125 |||||| |||||| ||||| | || ||| |||||||||||||||||||| Sbjct: 1622 gcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgt 1670 Score = 268 bits (135), Expect = 6e-68 Identities = 289/343 (84%) Strand = Plus / Plus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 862 gggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagc 921 Query: 66 tgtgggtcggggaatctggtcatgaaaacgaggagggagaagatattattgctgtcttgc 125 | ||||| ||||||||||||||||| || || |||||||||||||||||||| |||||| Sbjct: 922 tttgggttggggaatctggtcatgagaatgaacagggagaagatattattgctatcttgc 981 Query: 126 catgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagattgcat 185 ||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 982 catgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcat 1041 Query: 186 tgcttccattacgtcaagatttacgagaaaaatttaacgagacagcagcttggatttatg 245 | || || || | || |||||| || | ||||||||| ||||||||||||||| |||| Sbjct: 1042 tactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatg 1101 Query: 246 cnnnnnnnntgaatgggaagccttatgggtatcataatatgatcttcagttggatcgata 305 | || |||| || ||||||||||| || |||||||| || |||||||| |||| Sbjct: 1102 caaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgata 1161 Query: 306 ctataagtaacaactacccaccaccattggatgctcacgtggt 348 | ||||| ||||||| ||||| ||||| |||||||| ||||| Sbjct: 1162 ccataagcgacaactatccaccgccattagatgctcatgtggt 1204 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1212 cttttagtcagtacttcagctgtacatac 1240 ||||||||| |||||| |||||||||||| Sbjct: 1755 cttttagtctgtactttagctgtacatac 1783
>ref|NM_001051033.1| Oryza sativa (japonica cultivar-group) Os01g0793500 (Os01g0793500) mRNA, partial cds Length = 1933 Score = 517 bits (261), Expect = e-143 Identities = 417/469 (88%) Strand = Plus / Plus Query: 657 ggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgtg 716 |||||| ||||| |||||| |||||||||| ||||||||||| ||||| || | |||||| Sbjct: 1174 ggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtg 1233 Query: 717 gacagaagcccttaacaaacggctgggaaccaagggccttgatctacctgaaatcatagt 776 || ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 1234 gaaagaagcccttaacaaacggcttggaactaagggtcttgatctacctgaaatcatagt 1293 Query: 777 ggaatcagagaaacgcgggatgacatttgacaaattgctaacaattcctgagaaagataa 836 |||||||||||| || ||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1294 ggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataa 1353 Query: 837 atgggtctatactgatggccagtcagcatcttgtgtggcctacgtcctaatgatgtacaa 896 ||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1354 gtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaa 1413 Query: 897 ggaggccggactctttgaaccaatttccagctctatagaagtcacagagttcacgataaa 956 |||||| ||||||||||| |||||| |||||||||||||||| || || ||||| ||||| Sbjct: 1414 ggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccataaa 1473 Query: 957 agatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtggtgcaa 1016 ||||||||||| ||| ||||| || || |||||||||||| ||||| | ||||||||| Sbjct: 1474 agatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaa 1533 Query: 1017 caaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaatggaact 1076 |||||| |||| ||| ||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 1534 caaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagtt 1593 Query: 1077 gcctgggtacaacgccatggaaccatacgctcacatgaatgaaaggtgt 1125 |||||| |||||| ||||| | || ||| |||||||||||||||||||| Sbjct: 1594 gcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgt 1642 Score = 268 bits (135), Expect = 6e-68 Identities = 289/343 (84%) Strand = Plus / Plus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 834 gggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagc 893 Query: 66 tgtgggtcggggaatctggtcatgaaaacgaggagggagaagatattattgctgtcttgc 125 | ||||| ||||||||||||||||| || || |||||||||||||||||||| |||||| Sbjct: 894 tttgggttggggaatctggtcatgagaatgaacagggagaagatattattgctatcttgc 953 Query: 126 catgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagattgcat 185 ||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 954 catgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcat 1013 Query: 186 tgcttccattacgtcaagatttacgagaaaaatttaacgagacagcagcttggatttatg 245 | || || || | || |||||| || | ||||||||| ||||||||||||||| |||| Sbjct: 1014 tactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatg 1073 Query: 246 cnnnnnnnntgaatgggaagccttatgggtatcataatatgatcttcagttggatcgata 305 | || |||| || ||||||||||| || |||||||| || |||||||| |||| Sbjct: 1074 caaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgata 1133 Query: 306 ctataagtaacaactacccaccaccattggatgctcacgtggt 348 | ||||| ||||||| ||||| ||||| |||||||| ||||| Sbjct: 1134 ccataagcgacaactatccaccgccattagatgctcatgtggt 1176 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1212 cttttagtcagtacttcagctgtacataccacggtag 1248 ||||||||| |||||| ||||||||||| ||| |||| Sbjct: 1727 cttttagtctgtactttagctgtacatatcactgtag 1763
>dbj|AK101086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024J15, full insert sequence Length = 1935 Score = 517 bits (261), Expect = e-143 Identities = 417/469 (88%) Strand = Plus / Plus Query: 657 ggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgtg 716 |||||| ||||| |||||| |||||||||| ||||||||||| ||||| || | |||||| Sbjct: 1176 ggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtg 1235 Query: 717 gacagaagcccttaacaaacggctgggaaccaagggccttgatctacctgaaatcatagt 776 || ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 1236 gaaagaagcccttaacaaacggcttggaactaagggtcttgatctacctgaaatcatagt 1295 Query: 777 ggaatcagagaaacgcgggatgacatttgacaaattgctaacaattcctgagaaagataa 836 |||||||||||| || ||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1296 ggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataa 1355 Query: 837 atgggtctatactgatggccagtcagcatcttgtgtggcctacgtcctaatgatgtacaa 896 ||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1356 gtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaa 1415 Query: 897 ggaggccggactctttgaaccaatttccagctctatagaagtcacagagttcacgataaa 956 |||||| ||||||||||| |||||| |||||||||||||||| || || ||||| ||||| Sbjct: 1416 ggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccataaa 1475 Query: 957 agatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtggtgcaa 1016 ||||||||||| ||| ||||| || || |||||||||||| ||||| | ||||||||| Sbjct: 1476 agatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaa 1535 Query: 1017 caaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaatggaact 1076 |||||| |||| ||| ||||||||||| |||||||| |||||||| ||||||||||| | Sbjct: 1536 caaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagtt 1595 Query: 1077 gcctgggtacaacgccatggaaccatacgctcacatgaatgaaaggtgt 1125 |||||| |||||| ||||| | || ||| |||||||||||||||||||| Sbjct: 1596 gcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgt 1644 Score = 268 bits (135), Expect = 6e-68 Identities = 289/343 (84%) Strand = Plus / Plus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 836 gggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagc 895 Query: 66 tgtgggtcggggaatctggtcatgaaaacgaggagggagaagatattattgctgtcttgc 125 | ||||| ||||||||||||||||| || || |||||||||||||||||||| |||||| Sbjct: 896 tttgggttggggaatctggtcatgagaatgaacagggagaagatattattgctatcttgc 955 Query: 126 catgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagattgcat 185 ||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||| Sbjct: 956 catgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcat 1015 Query: 186 tgcttccattacgtcaagatttacgagaaaaatttaacgagacagcagcttggatttatg 245 | || || || | || |||||| || | ||||||||| ||||||||||||||| |||| Sbjct: 1016 tactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatg 1075 Query: 246 cnnnnnnnntgaatgggaagccttatgggtatcataatatgatcttcagttggatcgata 305 | || |||| || ||||||||||| || |||||||| || |||||||| |||| Sbjct: 1076 caaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgata 1135 Query: 306 ctataagtaacaactacccaccaccattggatgctcacgtggt 348 | ||||| ||||||| ||||| ||||| |||||||| ||||| Sbjct: 1136 ccataagcgacaactatccaccgccattagatgctcatgtggt 1178 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1212 cttttagtcagtacttcagctgtacataccacggtag 1248 ||||||||| |||||| ||||||||||| ||| |||| Sbjct: 1729 cttttagtctgtactttagctgtacatatcactgtag 1765
>gb|AY108557.1| Zea mays PCO137826 mRNA sequence Length = 1632 Score = 363 bits (183), Expect = 1e-96 Identities = 390/459 (84%) Strand = Plus / Plus Query: 657 ggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgtg 716 |||||| |||||||||||||| |||| ||||||||||||||| ||||| |||| ||||| Sbjct: 780 ggttgcttctgttatgactgtatggagcaagcttcaaccagagtatgctgctaatatgtg 839 Query: 717 gacagaagcccttaacaaacggctgggaaccaagggccttgatctacctgaaatcatagt 776 || ||||||||||||||||||||| ||||| ||||| ||||| || ||||||||||||| Sbjct: 840 gaaagaagcccttaacaaacggcttggaactaagggtcttgacctttctgaaatcatagt 899 Query: 777 ggaatcagagaaacgcgggatgacatttgacaaattgctaacaattcctgagaaagataa 836 ||||||||||||||| ||||| ||||||||||| || ||| | |||||||||| |||| Sbjct: 900 ggaatcagagaaacgtgggataacatttgacaagttactatctgttcctgagaacgatag 959 Query: 837 atgggtctatactgatggccagtcagcatcttgtgtggcctacgtcctaatgatgtacaa 896 ||||||||| ||||| |||||||||||||||||||| | |||||| ||||||||||| Sbjct: 960 ctgggtctatgaagatggtcagtcagcatcttgtgtggctttcgtccttatgatgtacaa 1019 Query: 897 ggaggccggactctttgaaccaatttccagctctatagaagtcacagagttcacgataaa 956 |||||| ||||||||||| || ||| |||||||||| ||||| || || ||||| ||||| Sbjct: 1020 ggaggctggactctttgaccctattaccagctctattgaagttactgaattcacaataaa 1079 Query: 957 agatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtggtgcaa 1016 ||||||||| ||||| ||||| || || | ||| ||| || ||||||| ||||||||| Sbjct: 1080 agatgcttatatcctcaacttttttgaggacaactcgacccgacttccggagtggtgcaa 1139 Query: 1017 caaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaatggaact 1076 ||| || ||| ||||||||| ||||||||||| |||||||||| || || ||||| || Sbjct: 1140 caaggatgacgatgtgaagcttcccttttgccagatcaagggcaagtaccggatggagct 1199 Query: 1077 gcctgggtacaacgccatggaaccatacgctcacatgaa 1115 |||||| |||||| ||||| |||| || || |||||||| Sbjct: 1200 gcctggatacaacaccatgaaaccctatgcccacatgaa 1238 Score = 252 bits (127), Expect = 3e-63 Identities = 287/343 (83%) Strand = Plus / Plus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 |||||||||| |||||||| ||||||||||| ||||||||||||||||| || || |||| Sbjct: 440 gggttactggtgcttatgctggccatactgcggtttgcctgagggactccgatggaaagc 499 Query: 66 tgtgggtcggggaatctggtcatgaaaacgaggagggagaagatattattgctgtcttgc 125 | ||||| |||||||||||| ||||||| || ||||||||||| | |||||| || ||| Sbjct: 500 tttgggttggggaatctggtaatgaaaatgaacagggagaagatgtcattgctatcctgc 559 Query: 126 catgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagattgcat 185 | ||||| |||||||||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 560 cctgggaggaatggtgggagtttgaagtgacaaaggatgactcaaatcctcagattgcac 619 Query: 186 tgcttccattacgtcaagatttacgagaaaaatttaacgagacagcagcttggatttatg 245 ||||||| || | || |||| | || | ||||||||| |||||||||||||||||||||| Sbjct: 620 tgcttcctttgcatccagatctgcgggcaaaatttaatgagacagcagcttggatttatg 679 Query: 246 cnnnnnnnntgaatgggaagccttatgggtatcataatatgatcttcagttggatcgata 305 | || | ||||| |||||||||||||| |||||||| || || ||||| |||| Sbjct: 680 caaaaagcatggaggggaaaccttatgggtatcacaatatgatatttagctggattgata 739 Query: 306 ctataagtaacaactacccaccaccattggatgctcacgtggt 348 | || ||| | || || ||||||||||| |||||||| ||||| Sbjct: 740 ccatcagtgataattatccaccaccattagatgctcatgtggt 782
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 274 bits (138), Expect = 9e-70 Identities = 177/190 (93%) Strand = Plus / Minus Query: 749 agggccttgatctacctgaaatcatagtggaatcagagaaacgcgggatgacatttgaca 808 |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 33603603 agggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgaca 33603544 Query: 809 aattgctaacaattcctgagaaagataaatgggtctatactgatggccagtcagcatctt 868 ||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 33603543 aattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttctt 33603484 Query: 869 gtgtggcctacgtcctaatgatgtacaaggaggccggactctttgaaccaatttccagct 928 ||||||| |||||||| ||||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 33603483 gtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagct 33603424 Query: 929 ctatagaagt 938 |||||||||| Sbjct: 33603423 ctatagaagt 33603414 Score = 174 bits (88), Expect = 6e-40 Identities = 209/252 (82%) Strand = Plus / Minus Query: 99 agggagaagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaa 158 |||||||||||||||||||| ||||||||||||||||||||||||| |||||| | || Sbjct: 33605184 agggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaa 33605125 Query: 159 aggatgattcgaatcctcagattgcattgcttccattacgtcaagatttacgagaaaaat 218 |||||||||| ||||||||||||||||| || || || | || |||||| || | ||||| Sbjct: 33605124 aggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaat 33605065 Query: 219 ttaacgagacagcagcttggatttatgcnnnnnnnntgaatgggaagccttatgggtatc 278 |||| ||||||||||||||| ||||| || |||| || ||||||||||| | Sbjct: 33605064 ttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtacc 33605005 Query: 279 ataatatgatcttcagttggatcgatactataagtaacaactacccaccaccattggatg 338 | |||||||| || |||||||| ||||| ||||| ||||||| ||||| ||||| |||| Sbjct: 33605004 acaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatg 33604945 Query: 339 ctcacgtggtat 350 |||| ||||||| Sbjct: 33604944 ctcatgtggtat 33604933 Score = 157 bits (79), Expect = 1e-34 Identities = 151/175 (86%) Strand = Plus / Minus Query: 951 gataaaagatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtg 1010 ||||||||||||||||| ||| ||||| || || |||||||||||| ||||| | ||| Sbjct: 33603147 gataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtg 33603088 Query: 1011 gtgcaacaaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaat 1070 |||||||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 33603087 gtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaat 33603028 Query: 1071 ggaactgcctgggtacaacgccatggaaccatacgctcacatgaatgaaaggtgt 1125 ||| ||||||| |||||| ||||| | || ||| |||||||||||||||||||| Sbjct: 33603027 ggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgt 33602973 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 33606101 gggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagc 33606042 Query: 66 tgtgggtcggggaatctggtcatga 90 | ||||| ||||||||||||||||| Sbjct: 33606041 tttgggttggggaatctggtcatga 33606017 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 655 taggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatg 714 |||||||| ||||| |||||| |||||||||| ||||||||||| ||||| || | |||| Sbjct: 33604700 taggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatg 33604641 Query: 715 tggacagaagcccttaacaaacggctgggaaccaagg 751 |||| ||||||||||||||||||||| ||||| |||| Sbjct: 33604640 tggaaagaagcccttaacaaacggcttggaactaagg 33604604 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1212 cttttagtcagtacttcagctgtacataccacggtag 1248 ||||||||| |||||| ||||||||||| ||| |||| Sbjct: 33602888 cttttagtctgtactttagctgtacatatcactgtag 33602852
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 274 bits (138), Expect = 9e-70 Identities = 177/190 (93%) Strand = Plus / Minus Query: 749 agggccttgatctacctgaaatcatagtggaatcagagaaacgcgggatgacatttgaca 808 |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 18475 agggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgaca 18416 Query: 809 aattgctaacaattcctgagaaagataaatgggtctatactgatggccagtcagcatctt 868 ||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 18415 aattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttctt 18356 Query: 869 gtgtggcctacgtcctaatgatgtacaaggaggccggactctttgaaccaatttccagct 928 ||||||| |||||||| ||||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 18355 gtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagct 18296 Query: 929 ctatagaagt 938 |||||||||| Sbjct: 18295 ctatagaagt 18286 Score = 174 bits (88), Expect = 6e-40 Identities = 209/252 (82%) Strand = Plus / Minus Query: 99 agggagaagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaa 158 |||||||||||||||||||| ||||||||||||||||||||||||| |||||| | || Sbjct: 20056 agggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaa 19997 Query: 159 aggatgattcgaatcctcagattgcattgcttccattacgtcaagatttacgagaaaaat 218 |||||||||| ||||||||||||||||| || || || | || |||||| || | ||||| Sbjct: 19996 aggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaat 19937 Query: 219 ttaacgagacagcagcttggatttatgcnnnnnnnntgaatgggaagccttatgggtatc 278 |||| ||||||||||||||| ||||| || |||| || ||||||||||| | Sbjct: 19936 ttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtacc 19877 Query: 279 ataatatgatcttcagttggatcgatactataagtaacaactacccaccaccattggatg 338 | |||||||| || |||||||| ||||| ||||| ||||||| ||||| ||||| |||| Sbjct: 19876 acaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatg 19817 Query: 339 ctcacgtggtat 350 |||| ||||||| Sbjct: 19816 ctcatgtggtat 19805 Score = 157 bits (79), Expect = 1e-34 Identities = 151/175 (86%) Strand = Plus / Minus Query: 951 gataaaagatgcttacatcctgaacttcttcgaagccaatatgacacgtcttccggcgtg 1010 ||||||||||||||||| ||| ||||| || || |||||||||||| ||||| | ||| Sbjct: 18019 gataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtg 17960 Query: 1011 gtgcaacaaagacgacactgtgaagctccccttttgccaaatcaagggcagatatcgaat 1070 |||||||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 17959 gtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaat 17900 Query: 1071 ggaactgcctgggtacaacgccatggaaccatacgctcacatgaatgaaaggtgt 1125 ||| ||||||| |||||| ||||| | || ||| |||||||||||||||||||| Sbjct: 17899 ggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgt 17845 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 6 gggttactggagcttatgcaggccatactgcagtttgcctgagggactctgaagggaagc 65 ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 20973 gggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagc 20914 Query: 66 tgtgggtcggggaatctggtcatga 90 | ||||| ||||||||||||||||| Sbjct: 20913 tttgggttggggaatctggtcatga 20889 Score = 105 bits (53), Expect = 5e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 655 taggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatg 714 |||||||| ||||| |||||| |||||||||| ||||||||||| ||||| || | |||| Sbjct: 19572 taggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatg 19513 Query: 715 tggacagaagcccttaacaaacggctgggaaccaagg 751 |||| ||||||||||||||||||||| ||||| |||| Sbjct: 19512 tggaaagaagcccttaacaaacggcttggaactaagg 19476 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1212 cttttagtcagtacttcagctgtacataccacggtag 1248 ||||||||| |||||| ||||||||||| ||| |||| Sbjct: 17760 cttttagtctgtactttagctgtacatatcactgtag 17724
>ref|NM_118836.1| Arabidopsis thaliana unknown protein (AT4G27020) mRNA, complete cds Length = 1836 Score = 97.6 bits (49), Expect = 1e-16 Identities = 121/145 (83%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 ||||||||||||||||||| || ||||| || ||||| || ||||||| || |||||| Sbjct: 854 tgagggactctgaagggaaactctgggttggtgaatccgggaatgaaaatgaaaagggag 913 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || | |||||||||||||| ||||||||||||||| || ||||||| Sbjct: 914 aagatgtaatagcgatattgccatgggaagagtggtgggagtttgaacaaaccaaggatg 973 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||| || ||||||||||| Sbjct: 974 actcgaatccccacattgcattgct 998 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 697 gattatgcagctagcatgtggacagaagcccttaacaaacggctgggaaccaagggcctt 756 |||||||| |||| |||||||| |||||||||||||| || || ||||| |||| ||| Sbjct: 1195 gattatgctgctaacatgtggaatgaagcccttaacaagcgactcggaacagagggtctt 1254 Query: 757 gatctacctga 767 ||||| ||||| Sbjct: 1255 gatcttcctga 1265 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 |||||||||| |||||||| |||||||||||||| Sbjct: 1433 aagtcacagaattcacgatcaaagatgcttacat 1466
>gb|AY143910.1| Arabidopsis thaliana At4g27020/F10M23_360 mRNA, complete cds Length = 1572 Score = 97.6 bits (49), Expect = 1e-16 Identities = 121/145 (83%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 ||||||||||||||||||| || ||||| || ||||| || ||||||| || |||||| Sbjct: 761 tgagggactctgaagggaaactctgggttggtgaatccgggaatgaaaatgaaaagggag 820 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || | |||||||||||||| ||||||||||||||| || ||||||| Sbjct: 821 aagatgtaatagcgatattgccatgggaagagtggtgggagtttgaacaaaccaaggatg 880 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||| || ||||||||||| Sbjct: 881 actcgaatccccacattgcattgct 905 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 697 gattatgcagctagcatgtggacagaagcccttaacaaacggctgggaaccaagggcctt 756 |||||||| |||| |||||||| |||||||||||||| || || ||||| |||| ||| Sbjct: 1102 gattatgctgctaacatgtggaatgaagcccttaacaagcgactcggaacagagggtctt 1161 Query: 757 gatctacctga 767 ||||| ||||| Sbjct: 1162 gatcttcctga 1172 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 |||||||||| |||||||| |||||||||||||| Sbjct: 1340 aagtcacagaattcacgatcaaagatgcttacat 1373
>gb|AY074868.1| Arabidopsis thaliana AT4g27020/F10M23_360 mRNA, complete cds Length = 1799 Score = 97.6 bits (49), Expect = 1e-16 Identities = 121/145 (83%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 ||||||||||||||||||| || ||||| || ||||| || ||||||| || |||||| Sbjct: 832 tgagggactctgaagggaaactctgggttggtgaatccgggaatgaaaatgaaaagggag 891 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || | |||||||||||||| ||||||||||||||| || ||||||| Sbjct: 892 aagatgtaatagcgatattgccatgggaagagtggtgggagtttgaacaaaccaaggatg 951 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||| || ||||||||||| Sbjct: 952 actcgaatccccacattgcattgct 976 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 697 gattatgcagctagcatgtggacagaagcccttaacaaacggctgggaaccaagggcctt 756 |||||||| |||| |||||||| |||||||||||||| || || ||||| |||| ||| Sbjct: 1173 gattatgctgctaacatgtggaatgaagcccttaacaagcgactcggaacagagggtctt 1232 Query: 757 gatctacctga 767 ||||| ||||| Sbjct: 1233 gatcttcctga 1243 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 |||||||||| |||||||| |||||||||||||| Sbjct: 1411 aagtcacagaattcacgatcaaagatgcttacat 1444
>gb|AY057561.1| Arabidopsis thaliana AT4g27020/F10M23_360 mRNA, complete cds Length = 1836 Score = 97.6 bits (49), Expect = 1e-16 Identities = 121/145 (83%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 ||||||||||||||||||| || ||||| || ||||| || ||||||| || |||||| Sbjct: 853 tgagggactctgaagggaaactctgggttggtgaatccgggaatgaaaatgaaaagggag 912 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || | |||||||||||||| ||||||||||||||| || ||||||| Sbjct: 913 aagatgtaatagcgatattgccatgggaagagtggtgggagtttgaacaaaccaaggatg 972 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||| || ||||||||||| Sbjct: 973 actcgaatccccacattgcattgct 997 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 697 gattatgcagctagcatgtggacagaagcccttaacaaacggctgggaaccaagggcctt 756 |||||||| |||| |||||||| |||||||||||||| || || ||||| |||| ||| Sbjct: 1194 gattatgctgctaacatgtggaatgaagcccttaacaagcgactcggaacagagggtctt 1253 Query: 757 gatctacctga 767 ||||| ||||| Sbjct: 1254 gatcttcctga 1264 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 |||||||||| |||||||| |||||||||||||| Sbjct: 1432 aagtcacagaattcacgatcaaagatgcttacat 1465
>emb|BX828493.1|CNS0A2FX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1798 Score = 83.8 bits (42), Expect = 2e-12 Identities = 121/146 (82%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtggg-tcggggaatctggtcatgaaaacgaggaggga 103 ||||||||||||||||||| || |||| | || ||||| || ||||||| || ||||| Sbjct: 815 tgagggactctgaagggaaactctggggttggtgaatccgggaatgaaaatgaaaaggga 874 Query: 104 gaagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggat 163 |||||| | || || | |||||||||||||| ||||||||||||||| || |||||| Sbjct: 875 gaagatgtaatagcgatattgccatgggaagagtggtgggagtttgaacaaaccaaggat 934 Query: 164 gattcgaatcctcagattgcattgct 189 || |||||||| || ||||||||||| Sbjct: 935 gactcgaatccccacattgcattgct 960 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 697 gattatgcagctagcatgtggacagaagcccttaacaaacggctgggaaccaagggcctt 756 |||||||| |||| |||||||| |||||||||||||| || || ||||| |||| ||| Sbjct: 1157 gattatgctgctaacatgtggaatgaagcccttaacaagcgactcggaacagagggtctt 1216 Query: 757 gatctacctga 767 ||||| ||||| Sbjct: 1217 gatcttcctga 1227 Score = 52.0 bits (26), Expect = 0.006 Identities = 32/34 (94%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 |||||||||| |||||||| |||||||||||||| Sbjct: 1395 aagtcacagaattcacgatcaaagatgcttacat 1428
>ref|NM_124869.2| Arabidopsis thaliana unknown protein (AT5G54870) mRNA, complete cds Length = 1805 Score = 73.8 bits (37), Expect = 2e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 |||| |||||||||||||| || ||||| || || || || ||||||| || |||||| Sbjct: 799 tgagagactctgaagggaaactttgggttggtgagtcaggaaatgaaaatgataagggag 858 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || |||| |||||||| || ||||||| |||||| |||||||||| Sbjct: 859 aagatgtaatagcaatcttaccatgggaggagtggtgggcatttgaacaaacaaaggatg 918 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||||||||||||| |||| Sbjct: 919 actcgaatcctcagattgcactgct 943 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacatcctgaacttcttcga 983 ||||||| || ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1378 aagtcacggaattcacgataaaagatgcttacatgctcaactttttcga 1426 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1067 gaatggaactgcctgggtacaacgccatggaaccatacgctcacatgaa 1115 |||||||||| ||||| |||||| | |||||||||||| | |||||||| Sbjct: 1510 gaatggaacttcctggttacaacactatggaaccatactcgcacatgaa 1558
>gb|BT008816.1| Arabidopsis thaliana At5g54870 mRNA, complete cds Length = 957 Score = 73.8 bits (37), Expect = 2e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 |||| |||||||||||||| || ||||| || || || || ||||||| || |||||| Sbjct: 785 tgagagactctgaagggaaactttgggttggtgagtcaggaaatgaaaatgataagggag 844 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || |||| |||||||| || ||||||| |||||| |||||||||| Sbjct: 845 aagatgtaatagcaatcttaccatgggaggagtggtgggcatttgaacaaacaaaggatg 904 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||||||||||||| |||| Sbjct: 905 actcgaatcctcagattgcactgct 929
>gb|AY042899.1| Arabidopsis thaliana Unknown protein (MBG8.13) mRNA, complete cds Length = 1800 Score = 73.8 bits (37), Expect = 2e-09 Identities = 118/145 (81%) Strand = Plus / Plus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatctggtcatgaaaacgaggagggag 104 |||| |||||||||||||| || ||||| || || || || ||||||| || |||||| Sbjct: 799 tgagagactctgaagggaaactttgggttggtgagtcaggaaatgaaaatgataagggag 858 Query: 105 aagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaaaggatg 164 ||||| | || || |||| |||||||| || ||||||| |||||| |||||||||| Sbjct: 859 aagatgtaatagcaatcttaccatgggaggagtggtgggcatttgaacaaacaaaggatg 918 Query: 165 attcgaatcctcagattgcattgct 189 | |||||||||||||||||| |||| Sbjct: 919 actcgaatcctcagattgcactgct 943 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacatcctgaacttcttcga 983 ||||||| || ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1379 aagtcacggaattcacgataaaagatgcttacatgctcaactttttcga 1427 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1067 gaatggaactgcctgggtacaacgccatggaaccatacgctcacatgaa 1115 |||||||||| ||||| |||||| | |||||||||||| | |||||||| Sbjct: 1511 gaatggaacttcctggttacaacactatggaaccatactcgcacatgaa 1559
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 122 ttgccatgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagatt 181 |||||||||||||| ||||||||||||||| || |||||||| |||||||| || ||| Sbjct: 73646 ttgccatgggaagagtggtgggagtttgaacaaaccaaggatgactcgaatccccacatt 73587 Query: 182 gcattgct 189 |||||||| Sbjct: 73586 gcattgct 73579 Score = 46.1 bits (23), Expect = 0.39 Identities = 65/79 (82%) Strand = Plus / Minus Query: 656 aggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgt 715 ||||||| ||||| ||||| || |||| ||| | || || |||||||| |||| ||||| Sbjct: 73263 aggttgcttctgtcatgacagtttggagcaaaatccagcctgattatgctgctaacatgt 73204 Query: 716 ggacagaagcccttaacaa 734 ||| |||||||||||||| Sbjct: 73203 ggaatgaagcccttaacaa 73185 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatc 81 ||||||||||||||||||| || ||||| || ||||| Sbjct: 74037 tgagggactctgaagggaaactctgggttggtgaatc 74001
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 122 ttgccatgggaagaatggtgggagtttgaaacgacaaaggatgattcgaatcctcagatt 181 |||||||||||||| ||||||||||||||| || |||||||| |||||||| || ||| Sbjct: 117803 ttgccatgggaagagtggtgggagtttgaacaaaccaaggatgactcgaatccccacatt 117744 Query: 182 gcattgct 189 |||||||| Sbjct: 117743 gcattgct 117736 Score = 46.1 bits (23), Expect = 0.39 Identities = 65/79 (82%) Strand = Plus / Minus Query: 656 aggttgcatctgttatgactgtgtggaacaagcttcaaccagattatgcagctagcatgt 715 ||||||| ||||| ||||| || |||| ||| | || || |||||||| |||| ||||| Sbjct: 117420 aggttgcttctgtcatgacagtttggagcaaaatccagcctgattatgctgctaacatgt 117361 Query: 716 ggacagaagcccttaacaa 734 ||| |||||||||||||| Sbjct: 117360 ggaatgaagcccttaacaa 117342 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 tgagggactctgaagggaagctgtgggtcggggaatc 81 ||||||||||||||||||| || ||||| || ||||| Sbjct: 118194 tgagggactctgaagggaaactctgggttggtgaatc 118158
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 61.9 bits (31), Expect = 7e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 99 agggagaagatattattgctgtcttgccatgggaagaatggtgggagtttgaaacgacaa 158 ||||||||||| | || || |||| |||||||| || ||||||| |||||| |||| Sbjct: 49469 agggagaagatgtaatagcaatcttaccatgggaggagtggtgggcatttgaacaaacaa 49528 Query: 159 aggatgattcgaatcctcagattgcattgct 189 ||||||| |||||||||||||||||| |||| Sbjct: 49529 aggatgactcgaatcctcagattgcactgct 49559 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1067 gaatggaactgcctgggtacaacgccatggaaccatacgctcacatgaa 1115 |||||||||| ||||| |||||| | |||||||||||| | |||||||| Sbjct: 50507 gaatggaacttcctggttacaacactatggaaccatactcgcacatgaa 50555 Score = 42.1 bits (21), Expect = 6.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 951 gataaaagatgcttacatcctgaacttcttcga 983 |||||||||||||||||| || ||||| ||||| Sbjct: 50391 gataaaagatgcttacatgctcaactttttcga 50423
>emb|BX832889.1|CNS0A28Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1414 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 137 tggtgggagtttgaaacgacaaaggatgattcgaatcctcagattgcattgct 189 ||||||| |||||||| ||||||||||| ||||||||||||| |||| |||| Sbjct: 842 tggtgggcatttgaaacaacaaaggatgactcgaatcctcagaatgcactgct 894
>dbj|AP006395.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT26P21, TM0279a, complete sequence Length = 61586 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Minus Query: 263 aagccttatgggtatcataatatgatcttcagttggatcgatactataagtaacaactac 322 ||||| ||||| ||||| |||||||| ||||||||||| || ||| || | ||||||| Sbjct: 14966 aagccatatggttatcacaatatgatattcagttggattgacactgtagctgacaactat 14907 Query: 323 ccaccaccattggatgctcacgtggta 349 || |||||| | ||||||||| ||||| Sbjct: 14906 cctccaccacttgatgctcacttggta 14880 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1069 atggaactgcctgggtacaacgccatggaaccatacgctcacatgaatga 1118 |||||||||||||| || ||| || |||| ||||| || ||||||||||| Sbjct: 12073 atggaactgcctggctataacaccttggagccatatgcccacatgaatga 12024
>gb|AC184064.2| Populus trichocarpa clone Pop1-109C22, complete sequence Length = 101694 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1146 cgtgagggatgaaaactgctgag 1168 ||||||||||||||||||||||| Sbjct: 43416 cgtgagggatgaaaactgctgag 43394
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 349 attatttatgtatatgttttcca 371 ||||||||||||||||||||||| Sbjct: 73628 attatttatgtatatgttttcca 73606
>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence Length = 179362 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 tattatttatgtatatgttttccaaaaacat 378 |||| |||||||||||||||||| ||||||| Sbjct: 82474 tattttttatgtatatgttttcctaaaacat 82504
>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156054 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 533 tatcatatttataaattgtagta 555 ||||||||||||||||||||||| Sbjct: 62579 tatcatatttataaattgtagta 62601
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 670 atgactgtgtggaacaagcttca 692 ||||||||||||||||||||||| Sbjct: 1325911 atgactgtgtggaacaagcttca 1325933
>gb|AC147565.4| Mus musculus BAC clone RP23-116P18 from 9, complete sequence Length = 206373 Score = 46.1 bits (23), Expect = 0.39 Identities = 29/31 (93%) Strand = Plus / Minus Query: 348 tattatttatgtatatgttttccaaaaacat 378 |||| |||||||||||||||||| ||||||| Sbjct: 16850 tattttttatgtatatgttttcctaaaacat 16820
>gb|DQ226893.1| Boechera divaricarpa isolate SLW-D-B08 mRNA sequence Length = 448 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 935 aagtcacagagttcacgataaaagatgcttacat 968 ||||||| || |||||||| |||||||||||||| Sbjct: 43 aagtcacggaattcacgatcaaagatgcttacat 76
>gb|AC144345.18| Medicago truncatula clone mth2-25i7, complete sequence Length = 125283 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 263 aagccttatgggtatcataatatgatcttcagttggat 300 ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 11513 aagccatatggttatcacaatatgatattcagttggat 11550
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 795 gatgacatttgacaaattgcta 816 |||||||||||||||||||||| Sbjct: 10362229 gatgacatttgacaaattgcta 10362250
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 795 gatgacatttgacaaattgcta 816 |||||||||||||||||||||| Sbjct: 4651 gatgacatttgacaaattgcta 4672
>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a, complete sequence Length = 60126 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 263 aagccttatgggtatcataatatgatcttcagttggat 300 ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 16645 aagccatatggttatcacaatatgatattcagttggat 16608
>gb|AC133200.3| Mus musculus BAC clone RP23-292C19 from 3, complete sequence Length = 229751 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 937 gtcacagagttcacgataaaag 958 |||||||||||||||||||||| Sbjct: 98963 gtcacagagttcacgataaaag 98942
>ref|XM_001031415.1| Tetrahymena thermophila SB210 Protein kinase domain containing protein (TTHERM_00825470) mRNA, complete cds Length = 2856 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ttgccatgggaagaatggtgg 142 ||||||||||||||||||||| Sbjct: 466 ttgccatgggaagaatggtgg 486
>gb|AC182562.2| Mimulus guttatus clone MGBa-38M20, complete sequence Length = 106193 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 275 tatcataatatgatcttcagttggatcga 303 |||||||| |||||||| ||||||||||| Sbjct: 71480 tatcataacatgatctttagttggatcga 71452
>emb|CR855325.16| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5, complete sequence Length = 198448 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 acagattaaaacattaatatttaat 494 ||||| ||||||||||||||||||| Sbjct: 125335 acagaataaaacattaatatttaat 125311
>ref|XM_001103693.1| PREDICTED: Macaca mulatta similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 (60 kDa BRG-1/Brm-associated factor subunit C) (BRG1-associated factor 60C) (mBAF60c), transcript variant 4 (LOC715080), mRNA Length = 2245 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 856 cagtcagcatcttgtgtggcc 876 ||||||||||||||||||||| Sbjct: 302 cagtcagcatcttgtgtggcc 282
>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete sequence Length = 162544 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 123136 cagtgttcattttattatttc 123156
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 45183 aaaacattcatagtgtttttg 45163
>gb|AY712676.1| Apis florea isolate 2 tRNA-Ile gene and NADH dehydrogenase subunit 2 gene, partial sequence; mitochondrial Length = 499 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 ttcattttattatttcatatg 409 ||||||||||||||||||||| Sbjct: 466 ttcattttattatttcatatg 446
>gb|AY712675.1| Apis florea isolate 1 tRNA-Ile gene and NADH dehydrogenase subunit 2 gene, partial sequence; mitochondrial Length = 499 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 ttcattttattatttcatatg 409 ||||||||||||||||||||| Sbjct: 466 ttcattttattatttcatatg 446
>gb|AC098654.2| Homo sapiens chromosome 1 clone RP11-475O6, complete sequence Length = 159975 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 819 aattcctgagaaagataaatg 839 ||||||||||||||||||||| Sbjct: 115458 aattcctgagaaagataaatg 115478
>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete sequence Length = 166687 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 133122 cagtgttcattttattatttc 133142
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 2065538 aaaacattcatagtgtttttg 2065558
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 27884211 aaaacattcatagtgtttttg 27884191
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 15537248 aaaacattcatagtgtttttg 15537228 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 16546444 aaaacattcatagtgtttttg 16546424
>gb|AC013458.5| Homo sapiens BAC clone RP11-85M11 from 3, complete sequence Length = 213532 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 344 gtggtattatttatgtatatgtttt 368 ||||||||||||||||| ||||||| Sbjct: 35717 gtggtattatttatgtagatgtttt 35693
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 73879 cagtgttcattttattatttc 73899
>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a RAB28, member RAS oncogene family pseudogene (RAB28), a pseudogene similar to part of recombining binding protein suppressor of hairless (Drosophila) (RBPSUH), two novel pseudogenes, a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), the 3' end of a novel gene and two CpG islands, complete sequence Length = 163837 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 156138 cagtgttcattttattatttc 156118
>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), two novel pseudogenes, a pseudogene similar to part of G protein-coupled receptor 116 (GPR116), a novel gene and a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), complete sequence Length = 167646 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 36717 cagtgttcattttattatttc 36697
>emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chromosome 9 Contains the 5' end of a novel gene, a novel pseudogene and a pseudogene similar to part of ribosomal protein L10 (RPL10), complete sequence Length = 153630 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 34151 cagtgttcattttattatttc 34131
>emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chromosome 9 Contains a pseudogene similar to part of 6-pyruvoyltetrahydropterin synthase (PTS), a novel gene similar to c9orf36, two novel genes and a novel pseudogene, complete sequence Length = 144571 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 122095 cagtgttcattttattatttc 122115
>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), three novel pseudogenes, two novel genes, a recombining binding protein suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a RAB28, member RAS oncogene family (RAB28) pseudogene and two CpG islands, complete sequence Length = 202891 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 70235 cagtgttcattttattatttc 70215
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene and a CpG island, complete sequence Length = 152623 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 139016 cagtgttcattttattatttc 138996
>emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chromosome 9 Contains the C9orf36 gene for chromosome 9 open reading frame 36, two novel pseudogenes, a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and two novel genes, complete sequence Length = 143520 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 21250 cagtgttcattttattatttc 21230
>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two novel pseudogenes, two novel genes, a recombining binding protein suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a RAB28, member RAS oncogene family (RAB28) pseudogene and a G protein-coupled receptor, family C, group 5,member B (GPRC5B) pseudogene, complete sequence Length = 157298 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 27448 cagtgttcattttattatttc 27428
>emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chromosome 9 Contains the gene for a novel protein similar to FLJ45202, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a pseudogene similar to part of contactin associated protein-like 4 (CNTNAP4), a novel pseudogene, three novel genes and a CpG island, complete sequence Length = 172579 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 166090 cagtgttcattttattatttc 166110
>emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), two novel genes, a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and a CpG island, complete sequence Length = 174366 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 52650 cagtgttcattttattatttc 52630
>emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), four novel genes, a pseudogene similar to part of ribosomal protein L10 (RPL10), a novel pseudogene and a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), complete sequence Length = 187505 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 152994 cagtgttcattttattatttc 153014
>emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on chromosome 9 Contains a novel pseudogene, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS-P1) pseudogene and three novel genes, complete sequence Length = 130898 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 116200 cagtgttcattttattatttc 116220
>emb|AL023804.4|HS633O20 Human DNA sequence from clone RP4-633O20 on chromosome 20q11.23-12 Contains part of the CTNNBL1 gene for catenin beta like 1, complete sequence Length = 96460 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1470 tgaaacctatgtacactatgt 1490 ||||||||||||||||||||| Sbjct: 88081 tgaaacctatgtacactatgt 88061
>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5, complete sequence Length = 149707 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 acagattaaaacattaatatttaat 494 ||||| ||||||||||||||||||| Sbjct: 53168 acagaataaaacattaatatttaat 53144
>gb|AY849558.1| Apis cerana clone 2 from Ganshu NADH dehydrogenase subunit 2 (ND2) gene, partial cds; mitochondrial Length = 416 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 ttcattttattatttcatatg 409 ||||||||||||||||||||| Sbjct: 238 ttcattttattatttcatatg 218
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a pseudogene similar to part of a novel protein (DKFZp434A171), a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of a novel transmembrane receptor protein and two novel pseudogenes, complete sequence Length = 189495 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 159239 cagtgttcattttattatttc 159259
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 47569 aaaacattcatagtgtttttg 47549
>emb|BX324148.9| Zebrafish DNA sequence from clone RP71-17G11 in linkage group 23, complete sequence Length = 127356 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 662 catctgttatgactgtgtgga 682 ||||||||||||||||||||| Sbjct: 25522 catctgttatgactgtgtgga 25502
>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete sequence Length = 166827 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 59381 cagtgttcattttattatttc 59401
>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23, complete sequence Length = 236136 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 662 catctgttatgactgtgtgga 682 ||||||||||||||||||||| Sbjct: 84375 catctgttatgactgtgtgga 84395
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 59068 aaaacattcatagtgtttttg 59088
>gb|AY107618.1| Zea mays PCO089892 mRNA sequence Length = 1603 Score = 42.1 bits (21), Expect = 6.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 87 atgaaaacgaggagggagaagatattattgctgtcttgccatgggaagaatggtggg 143 ||||||||||| |||||||||| || |||||| | | || ||||| |||||||||| Sbjct: 468 atgaaaacgagaagggagaagaaatcattgctatagttccttgggatgaatggtggg 524
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 aaaacattcatagtgtttttg 1402 ||||||||||||||||||||| Sbjct: 66017 aaaacattcatagtgtttttg 65997
>emb|AL358335.4|CNS05TE6 Human chromosome 14 DNA sequence BAC R-2G1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171072 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 618 atttgctaatgtagtaacttaaatctaat 646 ||||||| |||||||||||| |||||||| Sbjct: 31280 atttgcttatgtagtaacttcaatctaat 31308
>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete sequence Length = 186615 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 68809 cagtgttcattttattatttc 68829 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 172589 cagtgttcattttattatttc 172569
>emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chromosome 9, complete sequence Length = 163795 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cagtgttcattttattatttc 404 ||||||||||||||||||||| Sbjct: 42163 cagtgttcattttattatttc 42143
>emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chromosome 2, complete sequence Length = 183076 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 831 agataaatgggtctatactgatggc 855 |||||||||||| |||||||||||| Sbjct: 173973 agataaatgggtatatactgatggc 173949
>emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chromosome 4, complete sequence Length = 189029 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 tcattttattatttcatatgt 410 ||||||||||||||||||||| Sbjct: 43982 tcattttattatttcatatgt 44002
>emb|AL512359.2|CNS07EF8 Human chromosome 14 DNA sequence BAC R-286B5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157395 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 618 atttgctaatgtagtaacttaaatctaat 646 ||||||| |||||||||||| |||||||| Sbjct: 3385 atttgcttatgtagtaacttcaatctaat 3357
>gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, complete sequence Length = 203284 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 738 gctgggaaccaagggccttga 758 ||||||||||||||||||||| Sbjct: 38193 gctgggaaccaagggccttga 38173 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 304,889,377 Number of extensions: 16626197 Number of successful extensions: 319417 Number of sequences better than 10.0: 76 Number of HSP's gapped: 319411 Number of HSP's successfully gapped: 122 Length of query: 1601 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1578 Effective length of database: 18,503,978,556 Effective search space: 29199278161368 Effective search space used: 29199278161368 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)