ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51g17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK109924:Os11g0538400 31 0.91
2Os07g0478700:Os07g0478700 30 2.0
3AK111457:Os11g0434000 30 2.0
4AK106177:Os01g0283300 30 2.0
5AK104803:Os01g0283300 30 2.0
6AK104498:Os01g0283300 30 2.0
7AK073814:Os11g0434000 30 2.0
8AK068117:Os01g0283300 30 2.0
9AK061545:Os03g0339300 30 2.0
10AK110165: 29 2.6
11AK110159: 29 2.6
12AK108507:Os06g0487300 29 2.6
13AK099211:Os03g0799000 29 2.6
14AK067840:Os03g0799000 29 2.6
15AK058984:Os01g0246500 29 2.6
16AK107690:Os06g0548500 29 3.5
17AK067981:Os04g0477000 29 3.5
18AK067635:Os12g0182300 29 3.5
19AK106335:Os01g0687600 28 4.5
20AK102461:Os05g0480600 28 4.5
21Os03g0193700:Os03g0193700 28 5.9
22Os02g0634400:Os02g0634400 28 5.9
23Os02g0236500:Os02g0236500 28 5.9
24AK104982:Os03g0100200 28 5.9
25AK072547:Os03g0100200 28 5.9
26AK070848:Os01g0141900 28 5.9
27AK060634:Os04g0438700 28 5.9
28Os11g0613900:Os11g0613900 28 7.7
29Os03g0256800:Os03g0256800 28 7.7
30AK102859:Os08g0528700 28 7.7
31AK070420:Os01g0959000 28 7.7

>AK109924:Os11g0538400 |
          Length = 610
 Score = 30.8 bits (68), Expect = 0.91
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
 Frame = +3

Query: 183 HADPRPRLETDPR-----PLPDSDAPRVRAH--DRNLPGQQRGARQSSNPIPTLNNRGAN 341
           H D R  +   PR     P  D DAPR R H   R LP ++RGA  + +       R   
Sbjct: 289 HGDGRRGVPPLPRRQRRHPAVDGDAPRARPHRVRRRLPPRRRGAPAADDAAAAAVRRAGR 348

Query: 342 REPGR 356
              GR
Sbjct: 349 GPAGR 353



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>Os07g0478700:Os07g0478700 |
          Length = 1489

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = +3

Query: 135  GSPRASDHTRDTNMPWHADPRPRLETDPRPLPDSDAPRV--RAHDRNLPGQQRGARQSSN 308
            GSP AS  T D +  WH      L   P P  DS AP V   A     P    G+  S+ 
Sbjct: 878  GSPPASSATIDGHHCWHP-----LPGSPAPSADSSAPSVDPPASPAGSPTTTAGSPASTA 932

Query: 309  PIP 317
            P P
Sbjct: 933  PSP 935



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>AK111457:Os11g0434000 |
          Length = 221

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRA 257
           D ++PW    RPRL   P P P++DA  V+A
Sbjct: 13  DASVPWWRRKRPRL---PPPPPEADAEEVKA 40



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>AK106177:Os01g0283300 |
          Length = 273

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNP 311
           D N P    P+P   + P+PLP  D           PGQQ  A+ SS P
Sbjct: 203 DPNAPPQPLPQPDPNSPPQPLPQPD-------PNTPPGQQINAKISSQP 244



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>AK104803:Os01g0283300 |
          Length = 273

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNP 311
           D N P    P+P   + P+PLP  D           PGQQ  A+ SS P
Sbjct: 203 DPNAPPQPLPQPDPNSPPQPLPQPD-------PNTPPGQQINAKISSQP 244



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>AK104498:Os01g0283300 |
          Length = 273

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNP 311
           D N P    P+P   + P+PLP  D           PGQQ  A+ SS P
Sbjct: 203 DPNAPPQPLPQPDPNSPPQPLPQPD-------PNTPPGQQINAKISSQP 244



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>AK073814:Os11g0434000 |
          Length = 221

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRA 257
           D ++PW    RPRL   P P P++DA  V+A
Sbjct: 13  DASVPWWRRKRPRL---PPPPPEADAEEVKA 40



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>AK068117:Os01g0283300 |
          Length = 273

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +3

Query: 165 DTNMPWHADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNP 311
           D N P    P+P   + P+PLP  D           PGQQ  A+ SS P
Sbjct: 203 DPNAPPQPLPQPDPNSPPQPLPQPD-------PNTPPGQQINAKISSQP 244



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>AK061545:Os03g0339300 |
          Length = 270

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +3

Query: 183 HADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSS 305
           H  PRPRL   PRPL      R  AH R+    +   R  +
Sbjct: 195 HRRPRPRLRRQPRPLQRRLRRRHGAHGRHQAAHRHAGRDQA 235



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>AK110165: |
          Length = 1194

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = +2

Query: 176 ALARRPTSAARDRPTAAAGLRCP------ASPSARQEPARPTARRKAKL*PDPNS 322
           A+A  PT+A  D P   A    P      AS SA+  P   T+ R+A+  P P S
Sbjct: 162 AMAAAPTTAYDDEPAPVAVWPAPASRPADASESAKASPIPSTSPRRARETPYPTS 216



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>AK110159: |
          Length = 333

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/52 (32%), Positives = 19/52 (36%)
 Frame = +3

Query: 207 ETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNPIPTLNNRGANREPGRAG 362
           E  PRP  D    R R  DR  PG   G   S       N   ++  PG  G
Sbjct: 112 EPTPRPNEDGSGDRDREKDRATPGTASGNAASGAAPAASNKEASSPAPGSNG 163



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>AK108507:Os06g0487300 |
          Length = 81

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 143 QG*RPYPGHQHALARRPTSAARDRPTAAAGLRCPAS-PSARQEPARPTARRKAK 301
           +G R   G +    R P S    R T AAG R P S P+  ++P RP  R++ +
Sbjct: 31  RGGRRQRGERRVPPRPPPS---QRATLAAGRRAPRSAPAGTRQPRRPPIRKRRR 81



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>AK099211:Os03g0799000 |
          Length = 293

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +2

Query: 182 ARRPTSAARDRPTAAAGLRCPASPSARQEPARPTARRKAKL*PDPNS 322
           A +P +AA+ +  A    +  A+P A+   A+P A+ KAK  P P +
Sbjct: 179 AAKPKAAAKPKSPAKPAAKPKAAPKAK---AKPAAKPKAKAAPKPKA 222



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>AK067840:Os03g0799000 |
          Length = 293

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +2

Query: 182 ARRPTSAARDRPTAAAGLRCPASPSARQEPARPTARRKAKL*PDPNS 322
           A +P +AA+ +  A    +  A+P A+   A+P A+ KAK  P P +
Sbjct: 179 AAKPKAAAKPKSPAKPAAKPKAAPKAK---AKPAAKPKAKAAPKPKA 222



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>AK058984:Os01g0246500 |
          Length = 315

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 185 RRPTSAARDRPTAAAGLRCPASPSARQEPARPT 283
           ++P      +P AAA +  PA P++  +P +PT
Sbjct: 14  QQPQQQQEQQPVAAAAVPTPAPPASEAQPQKPT 46



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>AK107690:Os06g0548500 |
          Length = 230

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 182 ARRPTSA---ARDRPTAAAGLRCPASPSARQEPARPTARRKA 298
           AR P S+   AR   +++   R PA P+AR  P  PT R  A
Sbjct: 152 ARTPASSSPVARTPASSSPVARAPAPPAARGRPGAPTPRTDA 193



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>AK067981:Os04g0477000 |
          Length = 627

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 345 PYWHRDCSELGSG*SFALRLAVGLAGSCRALGLAGHLSPAAAVGLSLAA 199
           P+W RD SELG    + + +AV   G+  A  +   L   A   L +AA
Sbjct: 187 PWWARDISELGVDLYWRVMVAVKATGTVHAKAIGDTLKAYARRWLPIAA 235



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>AK067635:Os12g0182300 |
          Length = 973

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 480 VHGHVLHGPCRNKTMNCIPHECNISFIWKVYIVM*SLDVILRPSFCFYLSCKVPDGKQY 656
           ++GH++       TMN I H   I F+  +  V    ++ L+  FC Y    +P+G  Y
Sbjct: 673 INGHLI-------TMNSI-HTSAIDFVKAMEAVSNHSNIFLKTRFCTYYKAVMPNGSTY 723



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>AK106335:Os01g0687600 |
          Length = 349

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +3

Query: 186 ADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQRGARQSSNPIPTLNNRGANREPGR 356
           A  +P  +  P P P  +  R   H R+    +R   +SS+P  +  +R  +RE  R
Sbjct: 62  APAQPTKQPPPPPPPPHEPSRTGRHSRSPSPSRRHRTRSSSPSRSRRHRSRSRERRR 118



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>AK102461:Os05g0480600 |
          Length = 590

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 161 PGHQHALARRPTSAARDRPTAAAGLRCPAS--PSARQEPAR 277
           P  +  L  RP SA R RP  A G+R  ++  PSA   P +
Sbjct: 340 PNLRTKLPERPLSAGRSRPGMALGVRSTSNTEPSAASAPVK 380



 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
 Frame = +3

Query: 135 GSPRASDHTRDTNMPWHADPRPRLETDPRPLPD--SDAP---------RVRAHDRNLPGQ 281
           G   ++  +  ++ P    PRPR    P  +PD  ++ P         R  +  R+ PG 
Sbjct: 301 GGRNSAPSSAPSSRPSSPGPRPRAPVRPLDIPDFPNETPPNLRTKLPERPLSAGRSRPGM 360

Query: 282 QRGARQSSNPIPT 320
             G R +SN  P+
Sbjct: 361 ALGVRSTSNTEPS 373



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>Os03g0193700:Os03g0193700 |
          Length = 162

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 132 EGSPRASDHTRDTNMPWHADPRPRLETDPRPLPDSDAPRVRAHDRNLPGQQ 284
           +G P A++ TR  + PW A P   + +   PLP S   R  + DR    QQ
Sbjct: 47  DGRP-AAEATRARHPPWQAQPHSPVASSGPPLPSS---RWGSMDRGAADQQ 93



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>Os02g0634400:Os02g0634400 |
          Length = 183

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 152 RPYPGHQHALARRPTSAARDRPTAAAGLRCPASPSARQEPARP 280
           R  P   H     P S A   P AAAG  CP + ++R+ P  P
Sbjct: 52  RRLPSSSHCHEPPPPSPAH--PPAAAGSPCPPTATSRRRPHPP 92



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>Os02g0236500:Os02g0236500 |
          Length = 1084

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 152  RPYPGHQHALAR-RPTSAARDRPTAAAGLRCPASPSARQEPARPTARR 292
            +P P H  + AR R     R     AA  RCPA+P+A    ARP ++R
Sbjct: 899  KPAPAHHCSRARPRGRRPRRACAVCAARPRCPAAPTA----ARPRSQR 942



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>AK104982:Os03g0100200 |
          Length = 203

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 155 PYPGHQHALARRPTSAARDRPTAAAGLRCPASP----SARQEPARPTARRKAKL*PDPNS 322
           P+P     LAR   S  R R T+A G    ++P    S+ + P  P+    + L P P++
Sbjct: 59  PWPTCWATLARATPSRRRSRATSARGCWATSTPSTTSSSPRSPCSPSRASPSSLTPRPST 118



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>AK072547:Os03g0100200 |
          Length = 203

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +2

Query: 155 PYPGHQHALARRPTSAARDRPTAAAGLRCPASP----SARQEPARPTARRKAKL*PDPNS 322
           P+P     LAR   S  R R T+A G    ++P    S+ + P  P+    + L P P++
Sbjct: 59  PWPTCWATLARATPSRRRSRATSARGCWATSTPSTTSSSPRSPCSPSRASPSSLTPRPST 118



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>AK070848:Os01g0141900 |
          Length = 606

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +2

Query: 161 PGHQHALARRPTSAARDRPTAAAGLRCPASPSARQEPARPTAR 289
           P  + +L  RPTSA R RP A      P+S S+  EP  P AR
Sbjct: 390 PNLRTSLPERPTSATRGRPGA------PSSRSSSVEPG-PAAR 425



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>AK060634:Os04g0438700 |
          Length = 346

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 197 SAARDRPTAAAGLRCPASPSARQEPARPTARRKAKL*PDPN 319
           +AA   P AAA       P+A   P+ P   RK +L P P+
Sbjct: 18  AAAAADPAAAAPAAAATDPAAAGSPSPPLPPRKRRLSPTPS 58



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>Os11g0613900:Os11g0613900 |
          Length = 856

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +2

Query: 179 LARRPTSAARD-RPTAAAGLRCPASPSARQEPA---RPTARRK 295
           L R P S A D RP      RC  S SAR++P+   RP  R K
Sbjct: 787 LRRHPASPACDHRPPTVVLRRCRPSSSARRQPSSSRRPLHRAK 829



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>Os03g0256800:Os03g0256800 |
          Length = 1144

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = +2

Query: 152  RPYPGHQHALARRPTSAARDRPTAAAGLRCPASPSARQEP------ARPTARR 292
            +P+P  + A  R   +AAR RP AA+    PA P+    P       RP ARR
Sbjct: 897  QPHPRARAADGRAHLAAARARPRAAS----PARPTGAARPRPDGHRRRPPARR 945



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>AK102859:Os08g0528700 |
          Length = 187

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 10/69 (14%)
 Frame = +2

Query: 161 PGHQHALARRPTSAARDRPTAAAGL----------RCPASPSARQEPARPTARRKAKL*P 310
           P H  +  RRP S +   P+A A             CPA+P A      P          
Sbjct: 90  PSHGSSAPRRPASPSASPPSATASACPTPRSPASSSCPAAPRASTHATWPRGSSSG---- 145

Query: 311 DPNSEQSRC 337
            P+ + SRC
Sbjct: 146 SPSWDPSRC 154



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>AK070420:Os01g0959000 |
          Length = 432

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 185 RRPTSAARDRPTAAAGLRCPASPSARQEPARPTARRKAKL*PDP 316
           RR   A+  R       R P SP  R+ P+ P  RR++ + P P
Sbjct: 266 RRRADASPVRRGDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSP 309


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,972,721
Number of extensions: 432680
Number of successful extensions: 1964
Number of sequences better than 10.0: 31
Number of HSP's gapped: 1930
Number of HSP's successfully gapped: 32
Length of query: 230
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 133
Effective length of database: 11,515,878
Effective search space: 1531611774
Effective search space used: 1531611774
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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