| Clone Name | FLbaf51g17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP002962.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L8, complete sequence Length = 160222 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 55 caccatcatcctcttctcccattctcttcct 85 |||| ||| |||||||||||||||||||||| Sbjct: 17296 caccctcaccctcttctcccattctcttcct 17266
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 55 caccatcatcctcttctcccattctcttcct 85 |||| ||| |||||||||||||||||||||| Sbjct: 146729 caccctcaccctcttctcccattctcttcct 146699
>ref|XM_001022061.1| Tetrahymena thermophila SB210 chromo domain protein (TTHERM_00565610) mRNA, complete cds Length = 5151 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 ccgctcaccatcatcctcttct 71 |||||||||||||||||||||| Sbjct: 3345 ccgctcaccatcatcctcttct 3366
>emb|AL357134.13| Human DNA sequence from clone RP4-654C18 on chromosome 1 Contains the 5' end of the TCEA3 gene for transcription elongation factor A (SII) 3, a single-stranded DNA binding protein (SSBP1) pseudogene, the 3' end of the gene for up-regulated in liver cancer 1 (UPLC1) (FLJ34972, FLJ20199, FLJ20246) and a CpG island, complete sequence Length = 66464 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 tcctcttctcccattctcttcc 84 |||||||||||||||||||||| Sbjct: 48709 tcctcttctcccattctcttcc 48688
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence Length = 120437 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 atgaatgtaatatatcatttat 559 |||||||||||||||||||||| Sbjct: 107726 atgaatgtaatatatcatttat 107705
>gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, complete sequence Length = 178733 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 cttgctctgctgtttcttcttg 117 |||||||||||||||||||||| Sbjct: 74119 cttgctctgctgtttcttcttg 74140
>dbj|AB257440.1| Schoenoplectus juncoides ALS1 gene for acetolactate synthase, complete cds Length = 3339 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 tccttttgtttttatctttct 629 ||||||||||||||||||||| Sbjct: 597 tccttttgtttttatctttct 617
>gb|AC183983.2| Pan troglodytes BAC clone CH251-515C21 from chromosome 9, complete sequence Length = 154108 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 actcttgctctgctgtttctt 113 ||||||||||||||||||||| Sbjct: 17380 actcttgctctgctgtttctt 17360
>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence Length = 252587 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 catcatcctcttctcccattctctt 82 ||||||||||| ||||||||||||| Sbjct: 34700 catcatcctctgctcccattctctt 34724
>gb|DQ176436.1| Anabaena siamensis dinitrogenase alpha subunit (nifD) and dinitrogenase beta subunit (nifK) genes, partial cds Length = 2474 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cttgctctgctgtttcttctt 116 ||||||||||||||||||||| Sbjct: 1489 cttgctctgctgtttcttctt 1509
>gb|AC125130.3| Mus musculus BAC clone RP24-309C7 from chromosome 14, complete sequence Length = 159361 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 cttttgtttttatctttcttg 631 ||||||||||||||||||||| Sbjct: 69656 cttttgtttttatctttcttg 69676
>ref|XM_816683.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506559.250) partial mRNA Length = 4680 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 tgctctgctgtttcttcttgc 118 ||||||||||||||||||||| Sbjct: 3722 tgctctgctgtttcttcttgc 3702
>emb|AL161800.10| Human DNA sequence from clone RP11-318C17 on chromosome 20 Contains the 3' end fo the C20orf133 gene and the 3' end of a novel gene, complete sequence Length = 43741 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tcttctcccattctcttcctg 86 ||||||||||||||||||||| Sbjct: 6471 tcttctcccattctcttcctg 6491
>emb|AL136979.16| Human DNA sequence from clone RP11-130C19 on chromosome 9p24.1-24.3 Contains a translation initiation factor (SUI1) pseudogene, a novel gene and the gene for kidney ankyrin repeat-containing protein (KANK, KIAA0172), complete sequence Length = 197099 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 actcttgctctgctgtttctt 113 ||||||||||||||||||||| Sbjct: 137706 actcttgctctgctgtttctt 137726
>emb|BX927299.6| Zebrafish DNA sequence from clone DKEY-146H10 in linkage group 19, complete sequence Length = 70460 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 aatgtaatatatcatttatat 561 ||||||||||||||||||||| Sbjct: 47020 aatgtaatatatcatttatat 47040
>gb|AC129883.3| Ornithorhynchus anatinus clone OA_Bb-305F19, complete sequence Length = 181157 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcctcttctcccattctcttc 83 ||||||||||||||||||||| Sbjct: 52104 tcctcttctcccattctcttc 52084
>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete sequence Length = 142317 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcctcttctcccattctcttc 83 ||||||||||||||||||||| Sbjct: 136615 tcctcttctcccattctcttc 136635
>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete sequence Length = 167407 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 637 ttcccgatggaaaacaatatgtgag 661 |||| |||||||||||||||||||| Sbjct: 157899 ttccagatggaaaacaatatgtgag 157923
>gb|AC154848.2| Mus musculus BAC clone RP23-38J19 from 13, complete sequence Length = 140465 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcctcttctcccattctcttc 83 ||||||||||||||||||||| Sbjct: 135127 tcctcttctcccattctcttc 135147
>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence Length = 159766 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 catcatcctcttctcccattctctt 82 ||||||||||| ||||||||||||| Sbjct: 1517 catcatcctctgctcccattctctt 1493
>emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on chromosome 13, complete sequence Length = 219226 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tcctcttctcccattctcttc 83 ||||||||||||||||||||| Sbjct: 155277 tcctcttctcccattctcttc 155257 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 125,357,394 Number of extensions: 7462197 Number of successful extensions: 158383 Number of sequences better than 10.0: 21 Number of HSP's gapped: 158383 Number of HSP's successfully gapped: 21 Length of query: 692 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 670 Effective length of database: 18,508,616,841 Effective search space: 12400773283470 Effective search space used: 12400773283470 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)