ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45g11 |
|---|---|
| Clone Library Name | barley_pub |
>O74345:UCP3_SCHPO UBA domain-containing protein 3 - Schizosaccharomyces pombe| (Fission yeast) Length = 601 Score = 37.4 bits (85), Expect = 0.23 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Frame = +1 Query: 64 EGRRRGARPSSQTPRVLTMDLSSSLASTSDEETRALNALLDAFSCAFSLEDI-ANAYCRA 240 E ++P S PR + SS +ASTS ++R ++L FS + + +A Sbjct: 124 ENHSTNSKPPSLPPRTKSSSQSSPMASTSTSKSRYADSLSTLHDMGFSDDSVNTHALEET 183 Query: 241 NGDVNKAGDFLTDLQLSMPQSNEVDSSVETNL 336 NGDV +A + + S PQ +S ++ + Sbjct: 184 NGDVTRAIEKIVQHGSSKPQKPSTLTSTKSTI 215
>Q700C2:SPL16_ARATH Squamosa promoter-binding-like protein 16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 988 Score = 36.6 bits (83), Expect = 0.39 Identities = 59/261 (22%), Positives = 96/261 (36%), Gaps = 30/261 (11%) Frame = +2 Query: 731 DVLGSCGYDMKKSMDELMSF---------STNDLGKRPENEHIAV----QDTAVESSFSM 871 D+L + + S E ++F +ND K ++H A + T SF Sbjct: 265 DLLAALSASLGSSAPEAIAFLSQGGFGNKESNDRTKLTSSDHSATTSLEKKTLEFPSFGG 324 Query: 872 GSCLGSQ-------STSRSQITPGELLESIFTAPGRSEEEPKV---RRYELGANRRRVPD 1021 G S S SR Q T L +FT+ E PKV +Y A+ Sbjct: 325 GERTSSTNHSPSQYSDSRGQDTRSSLSLQLFTSSPEEESRPKVASSTKYYSSASS----- 379 Query: 1022 QKPVVKPLEDISPPSTDLPVKIILGSKEPVVRDEDDYQNYRKAAKQHWDMMKQYYAKAVD 1201 P+ED SP S+ + ++ P R Y NY+ + + ++ Sbjct: 380 -----NPVEDRSPSSSPVMQELFPLHTSPETR---RYNNYKDTSTS-----PRTSCLPLE 426 Query: 1202 AFREGNKKEAEYLRTEGKNYYMMARLSAEKSAG------EITKSKQESKNELCLDLRSQD 1363 F N+ T NY ++ S S+G + + QE ++ L +D Sbjct: 427 LFGASNRG-----ATANPNYNVLRHQSGYASSGSDYSPPSLNSNAQERTGKISFKLFEKD 481 Query: 1364 AANVANLLRLHL-RQLANIPS 1423 + + N LR + R L++ PS Sbjct: 482 PSQLPNTLRTEIFRWLSSFPS 502
>Q6PCI7:MCM5B_XENLA DNA replication licensing factor mcm5-B - Xenopus laevis (African| clawed frog) Length = 735 Score = 35.4 bits (80), Expect = 0.86 Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 4/98 (4%) Frame = +2 Query: 1139 YRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTEGKNYYMMARLSAEKSAGEITKSK 1318 YR K+H+++ + + ++ ++ A+YL + + + +A++ A E+T+ + Sbjct: 56 YRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPTEHLQLLEEAAQEVADEVTRPR 115 Query: 1319 ---QESKNELCLDLRSQ-DAANVANLLRLHLRQLANIP 1420 +E+ E+ + LRS + AN+ NL + L IP Sbjct: 116 PAGEETIQEIQVMLRSDANPANIRNLKSEQMSHLVKIP 153
>Q6ZV73:FGD6_HUMAN FYVE, RhoGEF and PH domain-containing protein 6 - Homo sapiens| (Human) Length = 1430 Score = 35.4 bits (80), Expect = 0.86 Identities = 56/275 (20%), Positives = 107/275 (38%), Gaps = 33/275 (12%) Frame = +2 Query: 728 RDVLGSCGYDMKKSMDELMSFSTNDLGKRPENE---------HIAVQDTAVESSFSMGSC 880 R L + G K + +EL+ S+ + +E H+ Q+ V SSF M Sbjct: 501 RHSLPATGVLKKAASEELLEKSSYPSSEEKSSEKSLERNHLQHLCAQNRGVSSSFDMPKR 560 Query: 881 LGSQSTSR--SQITP----GELLESIFTAPGRSEEEPKVRRYELGANRRRVPDQKPVVKP 1042 + + I P E L+S+ + S EP + A D + KP Sbjct: 561 ASEKPVWKLPHPILPFSGNPEFLKSVTVS---SNSEPSTALTKPRAKSLSAMDVEKCTKP 617 Query: 1043 LEDISPPSTDLPVKIILGSKEPVVRDEDDYQNYRKAAKQHWDMMKQYYA----KAVDAFR 1210 +D + ++ K +L K + + D+Q + + Q D + + K +++ Sbjct: 618 CKDSTKKNS---FKKLLSMKLSICFMKSDFQKFWSKSSQLGDTTTGHLSSGEQKGIESDW 674 Query: 1211 EG-----NKKEAEYLRTEGKNYYMMARLSAEKSAGEITKS---KQESKNELCLDLRSQDA 1366 +G K+ +NY + ++ +KS G+ + + + ES ++ L S Sbjct: 675 QGLLVGEEKRSKPIKAYSTENYSLESQKKRKKSRGQTSAANGLRAESLDDQMLSRESSSQ 734 Query: 1367 ANVANLLRL------HLRQLANIPSFENLRVIIGV 1453 A ++ L ++R IP +ENL I+ + Sbjct: 735 APYKSVTSLCAPEYENIRHYEEIPEYENLPFIMAI 769
>Q08954:YP199_YEAST Uncharacterized protein YPL199C - Saccharomyces cerevisiae (Baker's| yeast) Length = 240 Score = 34.3 bits (77), Expect = 1.9 Identities = 36/177 (20%), Positives = 78/177 (44%), Gaps = 9/177 (5%) Frame = +2 Query: 1085 IILGSKEPVVRD-----EDDYQNYRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTE 1249 +++G++ PV RD +++YQ R+ A + + Q ++ A+++G+KK A L + Sbjct: 7 VVVGTQNPV-RDYNHSTDEEYQRLRRLADEAYKKRDQLSHESQTAYQQGDKKLAHELSEK 65 Query: 1250 GKNYYMMARLSAEKSAGEITKSKQESKNELCLDLRSQDAANVANLLRLHLRQLANIPSFE 1429 K A ++A + + +DL +L+ ++ A + Sbjct: 66 SKAQLKTAEDFNMQAAEYVFVENNADSSSNEIDLHGLYVKEALFILQKRIK-FAIDHNEP 124 Query: 1430 NLRVIIG----VDDGTFKMGQRRRKVEKFLEKKSVEWTEDEANPGTILIPINQVKDQ 1588 L VI+G +G K+ + +E+F K + ++ N G +++ + V+ Q Sbjct: 125 QLNVIVGKGLHSQNGIAKL---KPSIEEFCAKHGIRNHLEKGNSGVLVLELQGVQMQ 178
>Q561P5:MCM5_XENTR DNA replication licensing factor mcm5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 735 Score = 33.9 bits (76), Expect = 2.5 Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 3/96 (3%) Frame = +2 Query: 1139 YRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTEGKNYYMMARLSAEKSAGEITKSK 1318 YR K+H+++ + + ++ ++ A+YL + + + +A++ A E+T+ + Sbjct: 56 YRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPTEHLQLLEEAAQEVADEVTRPR 115 Query: 1319 ---QESKNELCLDLRSQDAANVANLLRLHLRQLANI 1417 +E+ E+ + LRS AN AN+ L Q++++ Sbjct: 116 PAGEETIQEIQVMLRSD--ANPANIRSLKSEQMSHL 149
>P55862:MCM5A_XENLA DNA replication licensing factor mcm5-A - Xenopus laevis (African| clawed frog) Length = 735 Score = 33.9 bits (76), Expect = 2.5 Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 3/96 (3%) Frame = +2 Query: 1139 YRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTEGKNYYMMARLSAEKSAGEITKSK 1318 YR K+H+++ + + ++ ++ A+YL + + + +A++ A E+T+ + Sbjct: 56 YRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPTEHLQLLEEAAQEVADEVTRPR 115 Query: 1319 ---QESKNELCLDLRSQDAANVANLLRLHLRQLANI 1417 +E+ E+ + LRS AN AN+ L Q++++ Sbjct: 116 PAGEETIQEIQVMLRSD--ANPANIRSLKSEQMSHL 149
>P45386:IGA4_HAEIN Immunoglobulin A1 protease precursor - Haemophilus influenzae| Length = 1849 Score = 33.9 bits (76), Expect = 2.5 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Frame = +1 Query: 130 SSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFL--------TDLQ 285 +S A+ ++ E N +D + + L ++ Y N +V K + D+Q Sbjct: 958 ASNATRNNLEVTLANGSVDRGAWKYKLRNVNGRYDLYNPEVEKRNQTVDTTNITTPNDIQ 1017 Query: 286 LSMPQS---NEVDSSVETNLPQFGKAVEENSMDNSNRTRNLSCVGKAAEESSVENSSQT 453 P + NE + VET +P A E TR A EE++ NS++T Sbjct: 1018 ADAPSAQSNNEEIARVETPVPPPAPATESAIASEQPETRPAETAQPAMEETNTANSTET 1076
>Q06315:SKG3_YEAST Protein SKG3 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1026 Score = 33.5 bits (75), Expect = 3.3 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = +1 Query: 217 IANAYCRANGDVNKAGDFLTDLQLSMPQSNEVDSSVETNLPQFGKAVEENSMDNSNRTRN 396 +AN A D + F+TDL L++ S+ V+ + E +P FG EEN D +N Sbjct: 717 MANISSEALSDTAENSSFVTDLNLNINNSSSVNLNEEQRVPDFG---EENVFDPDYMEQN 773
>Q06678:RM35_YEAST 54S ribosomal protein L35, mitochondrial precursor - Saccharomyces| cerevisiae (Baker's yeast) Length = 367 Score = 33.5 bits (75), Expect = 3.3 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%) Frame = +2 Query: 887 SQSTSRSQITPGELLESIFTAPGRSEEEPKVRRYELGANRRRVPDQKPVVKPLEDISPPS 1066 S+ ++R + +P E ++ IF E+ + YEL AN+ + P +K + +I+ P Sbjct: 56 SRRSNRIKYSPPEHIDEIFRMSYDFLEQRSSKFYEL-ANKTKNPLKKDALLIKAEINNP- 113 Query: 1067 TDLPVKIILGSKEPVVRDEDDYQN--YRKAAKQHWDMMKQ 1180 ++ +K V+D DY YR KQHW+ Q Sbjct: 114 -EVQYNFQFNNKLNNVKDIIDYDVPVYRHLGKQHWESYGQ 152
>Q9MA98:ERCC1_ARATH DNA excision repair protein ERCC-1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 410 Score = 33.1 bits (74), Expect = 4.3 Identities = 27/93 (29%), Positives = 40/93 (43%) Frame = +2 Query: 881 LGSQSTSRSQITPGELLESIFTAPGRSEEEPKVRRYELGANRRRVPDQKPVVKPLEDISP 1060 LGS S + I + E + PG E + K +R P V + P Sbjct: 278 LGSTFGSLAHIIDASM-EDLARCPGIGERKVKRLYDTFHEPFKRATSSYPSV-----VEP 331 Query: 1061 PSTDLPVKIILGSKEPVVRDEDDYQNYRKAAKQ 1159 P + PV+ + S+EPV DED ++ RK K+ Sbjct: 332 PIPEAPVEKDVNSEEPVEEDEDFVEDSRKRKKK 364
>Q9Z0L3:OC90_MOUSE Otoconin 90 precursor - Mus musculus (Mouse)| Length = 485 Score = 32.7 bits (73), Expect = 5.6 Identities = 23/77 (29%), Positives = 34/77 (44%) Frame = -3 Query: 948 AVNIDSSNSPGVICDLDVDCDPRQLPMEKEDSTAVSCTAICSFSGLLPRSFVENDINSSM 769 AV +D P + DVDC +Q+ E ED +C+ ++ INSS+ Sbjct: 126 AVEMDCLQDPAKL-SADVDCTNKQITCESEDPCE---RLLCTCDKAAVECLAQSGINSSL 181 Query: 768 LFFMSYPQLPRTSRITS 718 F + LP+T TS Sbjct: 182 NFLDASFCLPQTPETTS 198
>O77788:NFM_BOVIN Neurofilament medium polypeptide - Bos taurus (Bovine)| Length = 926 Score = 32.7 bits (73), Expect = 5.6 Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Frame = +2 Query: 920 GELLESIFTAPGRSEEEPKVRRYELGANRRR-VPDQKPVVKPLEDISPPSTDLPVKIILG 1096 GE E + ++E PK + E + + VP++K P++ SP ++P K + Sbjct: 711 GEQKEKVEEEKKEAKESPKEEKAEKKEEKPKDVPEKKKAESPVKAESPVKEEVPAKPVKV 770 Query: 1097 SKEPVVRDEDDYQNYRKAAKQHWDMMKQYYAKAVDAFREGNKKE 1228 S E ++E+ Q K ++ +++ K +E K++ Sbjct: 771 SPEKEAKEEEKPQEKEKEKEK----VEEVGGKEEGGLKESRKED 810
>Q86UW6:N4BP2_HUMAN NEDD4-binding protein 2 - Homo sapiens (Human)| Length = 1770 Score = 32.3 bits (72), Expect = 7.3 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 1127 DYQNYRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTEG 1252 DY +YR A H + Y+KA +A+R G K A + +G Sbjct: 1618 DYDDYRAEAFLHQQKRMECYSKAKEAYRIGKKNVATFYAQQG 1659
>O83536:LON_TREPA ATP-dependent protease La - Treponema pallidum| Length = 881 Score = 32.3 bits (72), Expect = 7.3 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%) Frame = +2 Query: 827 HIAVQDTAVESSFSMGSCLGSQ-STSRSQITPGELLESIFTAPGRSEE-EPKVRRYELGA 1000 H V+++AVE+ + G + +T ++ P ES A G ++E EP+V+R G Sbjct: 17 HGDVRESAVENPSASAVSDGEERATFAPEVAPQTDTES---AQGAAQESEPEVQR--AGE 71 Query: 1001 NRRRVPDQKPVVKPLEDISP------PSTDLPVKIILGSKEP-VVRDEDDYQNYRKA 1150 + VP++ V PL+++ P P T P I G P ++ DEDD ++ A Sbjct: 72 AEKGVPEKAKAVVPLDELLPQKVHLIPLTGRP--IYPGIFTPLLISDEDDVRSVESA 126
>Q9N4M4:ANC1_CAEEL Nuclear anchorage protein 1 - Caenorhabditis elegans| Length = 8545 Score = 32.3 bits (72), Expect = 7.3 Identities = 24/119 (20%), Positives = 49/119 (41%) Frame = +1 Query: 121 DLSSSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFLTDLQLSMPQ 300 DL ++ T D+E RA D + ++ED+ + Y ++ A D L+ ++ Q Sbjct: 7734 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 7793 Query: 301 SNEVDSSVETNLPQFGKAVEENSMDNSNRTRNLSCVGKAAEESSVENSSQTRTREKSQK 477 ++ S + PQ K ++++ + L + KA + Q ++ K Sbjct: 7794 LTKLAESSDKIDPQVAKDIKDS---KTKAKELLQALEKAIPQEDAIRREQAEINDRLNK 7849 Score = 32.0 bits (71), Expect = 9.5 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 121 DLSSSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFLTDLQLSMPQ 300 DL ++ T D+E RA D + ++ED+ + Y ++ A D L+ ++ Q Sbjct: 3168 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 3227 Query: 301 SNEVDSSVETNLPQFGKAVEEN 366 ++ S + PQ K ++++ Sbjct: 3228 LTKLAESSDKIDPQVAKDIKDS 3249 Score = 32.0 bits (71), Expect = 9.5 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 121 DLSSSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFLTDLQLSMPQ 300 DL ++ T D+E RA D + ++ED+ + Y ++ A D L+ ++ Q Sbjct: 5025 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5084 Query: 301 SNEVDSSVETNLPQFGKAVEEN 366 ++ S + PQ K ++++ Sbjct: 5085 LTKLAESSDKIDPQVAKDIKDS 5106 Score = 32.0 bits (71), Expect = 9.5 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 121 DLSSSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFLTDLQLSMPQ 300 DL ++ T D+E RA D + ++ED+ + Y ++ A D L+ ++ Q Sbjct: 5928 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5987 Query: 301 SNEVDSSVETNLPQFGKAVEEN 366 ++ S + PQ K ++++ Sbjct: 5988 LTKLAESSDKIDPQVAKDIKDS 6009 Score = 32.0 bits (71), Expect = 9.5 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 121 DLSSSLASTSDEETRALNALLDAFSCAFSLEDIANAYCRANGDVNKAGDFLTDLQLSMPQ 300 DL ++ T D+E RA D + ++ED+ + Y ++ A D L+ ++ Q Sbjct: 6831 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 6890 Query: 301 SNEVDSSVETNLPQFGKAVEEN 366 ++ S + PQ K ++++ Sbjct: 6891 LTKLAESSDKIDPQVAKDIKDS 6912
>Q5AAJ7:SWC4_CANAL SWR1-complex protein 4 - Candida albicans (Yeast)| Length = 635 Score = 32.0 bits (71), Expect = 9.5 Identities = 26/89 (29%), Positives = 39/89 (43%) Frame = +2 Query: 1106 PVVRDEDDYQNYRKAAKQHWDMMKQYYAKAVDAFREGNKKEAEYLRTEGKNYYMMARLSA 1285 P DED Y Y K++ MK+ A+ RE +KE E E K Sbjct: 129 PEFVDEDTYDLYMIEIKEYESKMKEERAR-----REKERKEREKRDLEEKK--------- 174 Query: 1286 EKSAGEITKSKQESKNELCLDLRSQDAAN 1372 +K + KS+Q +N++ D ++QD N Sbjct: 175 KKQQQQQQKSQQNPQNQIKDDEKNQDTRN 203
>P27115:MGAT1_RABIT Alpha-1,3-mannosyl-glycoprotein| 2-beta-N-acetylglucosaminyltransferase - Oryctolagus cuniculus (Rabbit) Length = 447 Score = 32.0 bits (71), Expect = 9.5 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +2 Query: 986 YELGANRRRVPDQKPVVKPLEDISPPSTDLPVKIILGSKEPVVRDEDDYQNYRKAAK 1156 + L + R +VP P +P ++PP +P+ +I + V R D +YR +A+ Sbjct: 79 HALWSQRWKVPTAAPPAQPHVPVTPPPAVIPILVIACDRSTVRRCLDKLLHYRPSAE 135 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 337,871,149 Number of extensions: 7535832 Number of successful extensions: 22258 Number of sequences better than 10.0: 18 Number of HSP's gapped: 22239 Number of HSP's successfully gapped: 22 Length of query: 646 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 526 Effective length of database: 67,771,039 Effective search space: 35647566514 Effective search space used: 35647566514 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
