No.
Definition
Score (bits)
E Value
1 ref|NM_001054076.1| Oryza sativa (japonica cultivar-group) Os02g...
293
1e-75
2 dbj|AK068974.1| Oryza sativa (japonica cultivar-group) cDNA clon...
293
1e-75
3 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
190
1e-44
4 dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D...
190
1e-44
5 dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D...
190
1e-44
6 gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
60
3e-05
7 gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Can...
48
0.12
8 emb|CR727274.2|CNS0GO40 Tetraodon nigroviridis full-length cDNA
48
0.12
9 emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on ch...
46
0.47
10 gb|CP000207.2| Drosophila melanogaster genomic scaffold 21100002...
44
1.9
11 emb|BX936425.7| Zebrafish DNA sequence from clone CH211-39L24 in...
44
1.9
12 ref|XM_001024794.1| Tetrahymena thermophila SB210 hypothetical p...
42
7.4
13 gb|CP000312.1| Clostridium perfringens SM101, complete genome
42
7.4
14 gb|CP000246.1| Clostridium perfringens ATCC 13124, complete genome
42
7.4
15 gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl...
42
7.4
16 gb|AC151473.3| Mus musculus BAC clone RP24-492O15 from chromosom...
42
7.4
17 gb|AY560908.1| Canis familiaris EPM2A gene, promoter region
42
7.4
18 gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome...
42
7.4
19 gb|AC140389.3| Mus musculus BAC clone RP24-202H2 from chromosome...
42
7.4
20 gb|AE006239.1| Lactococcus lactis subsp. lactis IL1403 section 1...
42
7.4
21 gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosom...
42
7.4
22 gb|AC131717.3| Mus musculus chromosome 12 clone RP23-167A18, com...
42
7.4
23 gb|AC126277.3| Mus musculus BAC clone RP23-161L22 from 12, compl...
42
7.4
24 gb|AC013545.8| Homo sapiens chromosome 8, clone RP11-414D17, com...
42
7.4
25 emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chr...
42
7.4
26 emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in...
42
7.4
27 emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BA...
42
7.4
28 gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, co...
42
7.4
29 gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
42
7.4
30 emb|AL935046.6| Zebrafish DNA sequence from clone CH211-171K3, c...
42
7.4
31 emb|Y14554.1|CFPSI7 Cladosporium fulvum mRNA for pSI-7 protein
42
7.4
32 emb|CT030704.5| Mouse DNA sequence from clone RP24-317K15 on chr...
42
7.4
33 emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chr...
42
7.4
>ref|NM_001054076.1 | Oryza sativa (japonica cultivar-group) Os02g0639700 (Os02g0639700)
mRNA, complete cds
Length = 2159
Score = 293 bits (148), Expect = 1e-75
Identities = 399/482 (82%), Gaps = 3/482 (0%)
Strand = Plus / Plus
Query: 1097 agcaaagaaccagttgtgcgtgatgaggatgattaccagaactatcgtaaggctgcaaag 1156
|||||||||| ||||| | | ||||||| ||||||||||||||||||| |||||| |||
Sbjct: 1251 agcaaagaactagttgcacataatgaggaagattaccagaactatcgtagggctgcgaag 1310
Query: 1157 cagcactgggatatgatgaagcagtactatgcgaaggctgttgatgcttttagggagggt 1216
||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1311 cagcattgggatatgatgaagcaatactatgagaaggctgttgatgcttttagggagggt 1370
Query: 1217 aacaagaaagaagccgagtatcttcgtacggaaggaaagaactactatatgatggctcga 1276
||| ||||||||| ||||||||||| | |||||| || |||| || ||||||||||||
Sbjct: 1371 aaccagaaagaagtcgagtatcttcttggggaagggaaacactattacatgatggctcga 1430
Query: 1277 ttatctgctgaaaaatctgctggcgagatcaccaagtccaaaca---agagtccaaaaat 1333
| ||| |||||||||| ||| ||||| |||||| ||| | |||||| || |||
Sbjct: 1431 ctggctgatgaaaaatcttctgcggagattgtcaagtcgaaaaaagtagagtcaaagaat 1490
Query: 1334 gagttatgtcttgatctgcgctcacaagatgcagcaaatgtagcaaatcttctgagactt 1393
||||| |||||||| ||||| ||||||| |||| || ||||||||||| ||||||||
Sbjct: 1491 gagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaatctcgtgagactt 1550
Query: 1394 catcttaggcagttggctaacatcccatcttttgagaatctgagagttattattggtgtc 1453
|||||||| |||||| |||| ||||||||||||||| | ||| ||| |||| |||||
Sbjct: 1551 catcttagacagttgtctaatatcccatcttttgagtacttgaaagtcattactggtgct 1610
Query: 1454 gatgatggcactttcaagatgggacaaagaagaaggaaggttgagaagtttctggagaaa 1513
|| ||||||| |||||| || |||||||||||| ||||| ||||| |||||||||
Sbjct: 1611 gaggatggcagtttcaaatcggcacaaagaagaagaaaggtgatgaagtatctggagaag 1670
Query: 1514 aaatcagtcgagtggaccgaagatgaggccaatcctgggaccattctcattccgattaat 1573
||||| | | |||||| ||||| || |||| ||||||||||| ||||| || ||||||
Sbjct: 1671 aaatcgattgtgtggactgaagaggaatccaaccctgggaccatcctcatcccaattaat 1730
Query: 1574 ca 1575
||
Sbjct: 1731 ca 1732
Score = 220 bits (111), Expect = 1e-53
Identities = 159/175 (90%)
Strand = Plus / Plus
Query: 624 aatctgattctgcaccaaagagagagactttgaataacagagatgttgaggaattcctat 683
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 739 aatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctat 798
Query: 684 tttctatgcttggagaaggatttaagctcaacatggaagtgatccgtgatgttctaggca 743
|||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||
Sbjct: 799 tttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctaggca 858
Query: 744 gctgtgggtacgacatgaagaagagcatggatgaattaatgtcattttctacaaa 798
||||||| || ||||| |||||||||||||| ||| | |||||| ||||||||||
Sbjct: 859 gctgtggatatgacattaagaagagcatggaggaactgatgtcagtttctacaaa 913
Score = 190 bits (96), Expect = 1e-44
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 146 ccagtgatgaagagacaagggcacttaatgcattgcttgatgctttcagttgtgcctttt 205
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 316 ccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgcctttt 375
Query: 206 cgcttgaagatatagccaatgcatactgcagagcaaatggcgatgtcaacaaagctgggg 265
||||||| |||||||| | ||||| |||||||||||||| |||||||||| |||||| |
Sbjct: 376 cgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtg 435
Query: 266 atttcttgactgaccttcaactttcgatgccccagagtaatgaagttgactcaagcgttg 325
|| | |||||||| ||| ||| | | ||| || |||| ||||||||||||||||| ||||
Sbjct: 436 atctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttg 495
Score = 107 bits (54), Expect = 2e-19
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 920 ggagagttactagaatcaatattcactgcacctggaagatctgaggaggaaccaaaagta 979
|||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 1077 ggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaatagga 1136
Query: 980 aggcggtatgaattgggcgcaaatcgaaggagagttccagatcagaaaccagtcgtaaaa 1039
| || |||||| |||| |||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct: 1137 aaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaa 1196
Query: 1040 cctcttgaggacat 1053
|| |||||||||||
Sbjct: 1197 ccccttgaggacat 1210
Score = 81.8 bits (41), Expect = 9e-12
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 472 cagaagtctagtgcttcatttggcactgtatccagcatgttaggtaaaggatc 524
||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 579 cagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatc 631
Score = 44.1 bits (22), Expect = 1.9
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 848 gcagtagaatcctctttttccatggggagctgcctaggatcacaatccac 897
|||||||||| ||||| | | | ||| |||||||||| ||||||||||||
Sbjct: 963 gcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccac 1012
>dbj|AK068974.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023002E14, full
insert sequence
Length = 2160
Score = 293 bits (148), Expect = 1e-75
Identities = 399/482 (82%), Gaps = 3/482 (0%)
Strand = Plus / Plus
Query: 1097 agcaaagaaccagttgtgcgtgatgaggatgattaccagaactatcgtaaggctgcaaag 1156
|||||||||| ||||| | | ||||||| ||||||||||||||||||| |||||| |||
Sbjct: 1252 agcaaagaactagttgcacataatgaggaagattaccagaactatcgtagggctgcgaag 1311
Query: 1157 cagcactgggatatgatgaagcagtactatgcgaaggctgttgatgcttttagggagggt 1216
||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1312 cagcattgggatatgatgaagcaatactatgagaaggctgttgatgcttttagggagggt 1371
Query: 1217 aacaagaaagaagccgagtatcttcgtacggaaggaaagaactactatatgatggctcga 1276
||| ||||||||| ||||||||||| | |||||| || |||| || ||||||||||||
Sbjct: 1372 aaccagaaagaagtcgagtatcttcttggggaagggaaacactattacatgatggctcga 1431
Query: 1277 ttatctgctgaaaaatctgctggcgagatcaccaagtccaaaca---agagtccaaaaat 1333
| ||| |||||||||| ||| ||||| |||||| ||| | |||||| || |||
Sbjct: 1432 ctggctgatgaaaaatcttctgcggagattgtcaagtcgaaaaaagtagagtcaaagaat 1491
Query: 1334 gagttatgtcttgatctgcgctcacaagatgcagcaaatgtagcaaatcttctgagactt 1393
||||| |||||||| ||||| ||||||| |||| || ||||||||||| ||||||||
Sbjct: 1492 gagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaatctcgtgagactt 1551
Query: 1394 catcttaggcagttggctaacatcccatcttttgagaatctgagagttattattggtgtc 1453
|||||||| |||||| |||| ||||||||||||||| | ||| ||| |||| |||||
Sbjct: 1552 catcttagacagttgtctaatatcccatcttttgagtacttgaaagtcattactggtgct 1611
Query: 1454 gatgatggcactttcaagatgggacaaagaagaaggaaggttgagaagtttctggagaaa 1513
|| ||||||| |||||| || |||||||||||| ||||| ||||| |||||||||
Sbjct: 1612 gaggatggcagtttcaaatcggcacaaagaagaagaaaggtgatgaagtatctggagaag 1671
Query: 1514 aaatcagtcgagtggaccgaagatgaggccaatcctgggaccattctcattccgattaat 1573
||||| | | |||||| ||||| || |||| ||||||||||| ||||| || ||||||
Sbjct: 1672 aaatcgattgtgtggactgaagaggaatccaaccctgggaccatcctcatcccaattaat 1731
Query: 1574 ca 1575
||
Sbjct: 1732 ca 1733
Score = 220 bits (111), Expect = 1e-53
Identities = 159/175 (90%)
Strand = Plus / Plus
Query: 624 aatctgattctgcaccaaagagagagactttgaataacagagatgttgaggaattcctat 683
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 740 aatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctat 799
Query: 684 tttctatgcttggagaaggatttaagctcaacatggaagtgatccgtgatgttctaggca 743
|||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||||
Sbjct: 800 tttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctaggca 859
Query: 744 gctgtgggtacgacatgaagaagagcatggatgaattaatgtcattttctacaaa 798
||||||| || ||||| |||||||||||||| ||| | |||||| ||||||||||
Sbjct: 860 gctgtggatatgacattaagaagagcatggaggaactgatgtcagtttctacaaa 914
Score = 190 bits (96), Expect = 1e-44
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 146 ccagtgatgaagagacaagggcacttaatgcattgcttgatgctttcagttgtgcctttt 205
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 317 ccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgcctttt 376
Query: 206 cgcttgaagatatagccaatgcatactgcagagcaaatggcgatgtcaacaaagctgggg 265
||||||| |||||||| | ||||| |||||||||||||| |||||||||| |||||| |
Sbjct: 377 cgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtg 436
Query: 266 atttcttgactgaccttcaactttcgatgccccagagtaatgaagttgactcaagcgttg 325
|| | |||||||| ||| ||| | | ||| || |||| ||||||||||||||||| ||||
Sbjct: 437 atctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttg 496
Score = 107 bits (54), Expect = 2e-19
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 920 ggagagttactagaatcaatattcactgcacctggaagatctgaggaggaaccaaaagta 979
|||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 1078 ggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaatagga 1137
Query: 980 aggcggtatgaattgggcgcaaatcgaaggagagttccagatcagaaaccagtcgtaaaa 1039
| || |||||| |||| |||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct: 1138 aaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaa 1197
Query: 1040 cctcttgaggacat 1053
|| |||||||||||
Sbjct: 1198 ccccttgaggacat 1211
Score = 81.8 bits (41), Expect = 9e-12
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 472 cagaagtctagtgcttcatttggcactgtatccagcatgttaggtaaaggatc 524
||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 580 cagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatc 632
Score = 44.1 bits (22), Expect = 1.9
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 848 gcagtagaatcctctttttccatggggagctgcctaggatcacaatccac 897
|||||||||| ||||| | | | ||| |||||||||| ||||||||||||
Sbjct: 964 gcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccac 1013
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 190 bits (96), Expect = 1e-44
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 146 ccagtgatgaagagacaagggcacttaatgcattgcttgatgctttcagttgtgcctttt 205
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25684844 ccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgcctttt 25684903
Query: 206 cgcttgaagatatagccaatgcatactgcagagcaaatggcgatgtcaacaaagctgggg 265
||||||| |||||||| | ||||| |||||||||||||| |||||||||| |||||| |
Sbjct: 25684904 cgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtg 25684963
Query: 266 atttcttgactgaccttcaactttcgatgccccagagtaatgaagttgactcaagcgttg 325
|| | |||||||| ||| ||| | | ||| || |||| ||||||||||||||||| ||||
Sbjct: 25684964 atctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttg 25685023
Score = 163 bits (82), Expect = 3e-36
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 624 aatctgattctgcaccaaagagagagactttgaataacagagatgttgaggaattcctat 683
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 25685267 aatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctat 25685326
Query: 684 tttctatgcttggagaaggatttaagctcaacatggaagtgatccgtgatgttctagg 741
|||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||
Sbjct: 25685327 tttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctagg 25685384
Score = 107 bits (54), Expect = 2e-19
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 920 ggagagttactagaatcaatattcactgcacctggaagatctgaggaggaaccaaaagta 979
|||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 25686538 ggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaatagga 25686597
Query: 980 aggcggtatgaattgggcgcaaatcgaaggagagttccagatcagaaaccagtcgtaaaa 1039
| || |||||| |||| |||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct: 25686598 aaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaa 25686657
Query: 1040 cctcttgaggacat 1053
|| |||||||||||
Sbjct: 25686658 ccccttgaggacat 25686671
Score = 101 bits (51), Expect = 9e-18
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1119 atgaggatgattaccagaactatcgtaaggctgcaaagcagcactgggatatgatgaagc 1178
||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||
Sbjct: 25687741 atgaggaagattaccagaactatcgtagggctgcgaagcagcattgggatatgatgaagc 25687800
Query: 1179 agtactatgcgaagg 1193
| ||||||| |||||
Sbjct: 25687801 aatactatgagaagg 25687815
Score = 85.7 bits (43), Expect = 6e-13
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1191 aggctgttgatgcttttagggagggtaacaagaaagaagccgagtatcttc 1241
||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 25687922 aggctgttgatgcttttagggagggtaaccagaaagaagtcgagtatcttc 25687972
Score = 81.8 bits (41), Expect = 9e-12
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 472 cagaagtctagtgcttcatttggcactgtatccagcatgttaggtaaaggatc 524
||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 25685107 cagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatc 25685159
Score = 81.8 bits (41), Expect = 9e-12
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 1321 agagtccaaaaatgagttatgtcttgatctgcgctcacaagatgcagcaaatgtagcaaa 1380
|||||| || |||||||| |||||||| ||||| ||||||| |||| || ||||||||
Sbjct: 25688517 agagtcaaagaatgagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaa 25688576
Query: 1381 tcttctgagacttcatcttaggcagttggctaacatcccat 1421
||| |||||||||||||||| |||||| |||| |||||||
Sbjct: 25688577 tctcgtgagacttcatcttagacagttgtctaatatcccat 25688617
Score = 44.1 bits (22), Expect = 1.9
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 848 gcagtagaatcctctttttccatggggagctgcctaggatcacaatccac 897
|||||||||| ||||| | | | ||| |||||||||| ||||||||||||
Sbjct: 25686331 gcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccac 25686380
Score = 44.1 bits (22), Expect = 1.9
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1498 gaagtttctggagaaaaaatcagtcgagtggaccgaagatgaggccaatcctgggaccat 1557
||||| ||||||||| ||||| | | |||||| ||||| || |||| |||||||||||
Sbjct: 25689622 gaagtatctggagaagaaatcgattgtgtggactgaagaggaatccaaccctgggaccat 25689681
Query: 1558 tctcattccgattaatca 1575
||||| || ||||||||
Sbjct: 25689682 cctcatcccaattaatca 25689699
>dbj|AP005513.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0014E22
Length = 157627
Score = 190 bits (96), Expect = 1e-44
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 146 ccagtgatgaagagacaagggcacttaatgcattgcttgatgctttcagttgtgcctttt 205
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 154891 ccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgcctttt 154950
Query: 206 cgcttgaagatatagccaatgcatactgcagagcaaatggcgatgtcaacaaagctgggg 265
||||||| |||||||| | ||||| |||||||||||||| |||||||||| |||||| |
Sbjct: 154951 cgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtg 155010
Query: 266 atttcttgactgaccttcaactttcgatgccccagagtaatgaagttgactcaagcgttg 325
|| | |||||||| ||| ||| | | ||| || |||| ||||||||||||||||| ||||
Sbjct: 155011 atctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttg 155070
Score = 163 bits (82), Expect = 3e-36
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 624 aatctgattctgcaccaaagagagagactttgaataacagagatgttgaggaattcctat 683
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 155314 aatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctat 155373
Query: 684 tttctatgcttggagaaggatttaagctcaacatggaagtgatccgtgatgttctagg 741
|||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||
Sbjct: 155374 tttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctagg 155431
Score = 107 bits (54), Expect = 2e-19
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 920 ggagagttactagaatcaatattcactgcacctggaagatctgaggaggaaccaaaagta 979
|||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 156585 ggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaatagga 156644
Query: 980 aggcggtatgaattgggcgcaaatcgaaggagagttccagatcagaaaccagtcgtaaaa 1039
| || |||||| |||| |||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct: 156645 aaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaa 156704
Query: 1040 cctcttgaggacat 1053
|| |||||||||||
Sbjct: 156705 ccccttgaggacat 156718
Score = 81.8 bits (41), Expect = 9e-12
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 472 cagaagtctagtgcttcatttggcactgtatccagcatgttaggtaaaggatc 524
||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 155154 cagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatc 155206
Score = 44.1 bits (22), Expect = 1.9
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 848 gcagtagaatcctctttttccatggggagctgcctaggatcacaatccac 897
|||||||||| ||||| | | | ||| |||||||||| ||||||||||||
Sbjct: 156378 gcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccac 156427
>dbj|AP004768.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0010C01
Length = 186185
Score = 190 bits (96), Expect = 1e-44
Identities = 159/180 (88%)
Strand = Plus / Plus
Query: 146 ccagtgatgaagagacaagggcacttaatgcattgcttgatgctttcagttgtgcctttt 205
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 87520 ccagtgatgacgagacaagggcacttaatgcattgcttgatgctttcagttctgcctttt 87579
Query: 206 cgcttgaagatatagccaatgcatactgcagagcaaatggcgatgtcaacaaagctgggg 265
||||||| |||||||| | ||||| |||||||||||||| |||||||||| |||||| |
Sbjct: 87580 cgcttgatgatatagctacggcatattgcagagcaaatggtgatgtcaacagagctggtg 87639
Query: 266 atttcttgactgaccttcaactttcgatgccccagagtaatgaagttgactcaagcgttg 325
|| | |||||||| ||| ||| | | ||| || |||| ||||||||||||||||| ||||
Sbjct: 87640 atctattgactgaacttgaacatcctatggccaagagcaatgaagttgactcaagtgttg 87699
Score = 163 bits (82), Expect = 3e-36
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 624 aatctgattctgcaccaaagagagagactttgaataacagagatgttgaggaattcctat 683
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 87943 aatctgattctgcaccaaagagagagactttgaataatagagatatagaggaatttctat 88002
Query: 684 tttctatgcttggagaaggatttaagctcaacatggaagtgatccgtgatgttctagg 741
|||||||||||||||||||||| ||||||| |||||| |||||||||| ||||||||
Sbjct: 88003 tttctatgcttggagaaggattcaagctcagcatggacatgatccgtgaggttctagg 88060
Score = 107 bits (54), Expect = 2e-19
Identities = 114/134 (85%)
Strand = Plus / Plus
Query: 920 ggagagttactagaatcaatattcactgcacctggaagatctgaggaggaaccaaaagta 979
|||||||| |||| ||||| ||||||| ||||| |||||| ||||||||||||| || |
Sbjct: 89214 ggagagttgctagtgtcaatcttcactgtacctgaaagatccgaggaggaaccaatagga 89273
Query: 980 aggcggtatgaattgggcgcaaatcgaaggagagttccagatcagaaaccagtcgtaaaa 1039
| || |||||| |||| |||||||||| ||||| ||||||||||||||||| ||| ||
Sbjct: 89274 aaacgatatgaactgggtgcaaatcgaaacagagtaccagatcagaaaccagttgtagaa 89333
Query: 1040 cctcttgaggacat 1053
|| |||||||||||
Sbjct: 89334 ccccttgaggacat 89347
Score = 101 bits (51), Expect = 9e-18
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1119 atgaggatgattaccagaactatcgtaaggctgcaaagcagcactgggatatgatgaagc 1178
||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||
Sbjct: 90417 atgaggaagattaccagaactatcgtagggctgcgaagcagcattgggatatgatgaagc 90476
Query: 1179 agtactatgcgaagg 1193
| ||||||| |||||
Sbjct: 90477 aatactatgagaagg 90491
Score = 85.7 bits (43), Expect = 6e-13
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1191 aggctgttgatgcttttagggagggtaacaagaaagaagccgagtatcttc 1241
||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 90598 aggctgttgatgcttttagggagggtaaccagaaagaagtcgagtatcttc 90648
Score = 81.8 bits (41), Expect = 9e-12
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 472 cagaagtctagtgcttcatttggcactgtatccagcatgttaggtaaaggatc 524
||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 87783 cagaagtctagtgcttcatttggcactgtatccagtatgttaggaaagggatc 87835
Score = 81.8 bits (41), Expect = 9e-12
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 1321 agagtccaaaaatgagttatgtcttgatctgcgctcacaagatgcagcaaatgtagcaaa 1380
|||||| || |||||||| |||||||| ||||| ||||||| |||| || ||||||||
Sbjct: 91193 agagtcaaagaatgagttgtgtcttgacctgcgtggacaagatccagccaacgtagcaaa 91252
Query: 1381 tcttctgagacttcatcttaggcagttggctaacatcccat 1421
||| |||||||||||||||| |||||| |||| |||||||
Sbjct: 91253 tctcgtgagacttcatcttagacagttgtctaatatcccat 91293
Score = 44.1 bits (22), Expect = 1.9
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 848 gcagtagaatcctctttttccatggggagctgcctaggatcacaatccac 897
|||||||||| ||||| | | | ||| |||||||||| ||||||||||||
Sbjct: 89007 gcagtagaatgctcttctacaaagggaagctgcctagaatcacaatccac 89056
Score = 44.1 bits (22), Expect = 1.9
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1498 gaagtttctggagaaaaaatcagtcgagtggaccgaagatgaggccaatcctgggaccat 1557
||||| ||||||||| ||||| | | |||||| ||||| || |||| |||||||||||
Sbjct: 92298 gaagtatctggagaagaaatcgattgtgtggactgaagaggaatccaaccctgggaccat 92357
Query: 1558 tctcattccgattaatca 1575
||||| || ||||||||
Sbjct: 92358 cctcatcccaattaatca 92375
>emb|AL807397.6 | Mouse DNA sequence from clone RP23-176N13 on chromosome 4, complete
sequence
Length = 193939
Score = 42.1 bits (21), Expect = 7.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1380 atcttctgagacttcatctta 1400
|||||||||||||||||||||
Sbjct: 99805 atcttctgagacttcatctta 99785
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 374,856,274
Number of extensions: 19304617
Number of successful extensions: 378782
Number of sequences better than 10.0: 33
Number of HSP's gapped: 378779
Number of HSP's successfully gapped: 64
Length of query: 1940
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1917
Effective length of database: 18,503,978,556
Effective search space: 35472126891852
Effective search space used: 35472126891852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)