ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48e19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068155:Os08g0485400 354 2e-97
2AK100705:Os08g0485400 222 9e-58
3AK109964: 46 1e-04
4AK110223:Os01g0329300 33 1.1
5AK070848:Os01g0141900 32 2.3
6AK110196:Os05g0516400 31 4.0
7AK070117:Os06g0572000 30 5.2
8AK109861:Os12g0117500 30 5.2
9AK110283: 30 6.8
10AY360145:Os05g0148600 30 8.9
11AK104336:Os05g0148600 30 8.9
12AK066168:Os05g0148600 30 8.9

>AK068155:Os08g0485400 |
          Length = 280
 Score =  354 bits (908), Expect = 2e-97
 Identities = 185/297 (62%), Positives = 197/297 (66%)
 Frame = +1

Query: 34  MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWVPRSXXXXXXXXXXX 213
           MGWKGI+GFD+GVVQAPLGPDISGPEL         IGLLRLPDW               
Sbjct: 1   MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDW--------------- 45

Query: 214 XG*SPEPPTCLQPAPDHVRELIRRTRSLTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXX 393
                       PAPD VR+LIRRTRSLTE+PFGAAIVLAFPH                 
Sbjct: 46  ------------PAPDRVRDLIRRTRSLTERPFGAAIVLAFPHEENLRVVLEEKLAVLQV 93

Query: 394 YWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXX 573
           YWGEFP+ERVDEAH AGVKVLHQVG  EEAAKAKEAGVDGII+QG EAGGHVIGQEG   
Sbjct: 94  YWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLP 153

Query: 574 XXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXXXXXXXXXXXTRFVATEESFAHPLYKKK 753
                           IAAGGIVD                  TRF+ TEESFAHPLYKK+
Sbjct: 154 LLPRVVDLVSDTDISVIAAGGIVDGRGYAAALALGAQGVCLGTRFLTTEESFAHPLYKKR 213

Query: 754 LIEMNCTDYTNVFGRARWPGAPQRVLKTPFYVEWKNLPDHETEENQPIIGHSIIHGV 924
           LIE+NCT YTNVFGRARWPGAPQRVLKT FY +WKNLP+ ETEENQPIIGH+IIHGV
Sbjct: 214 LIEINCTGYTNVFGRARWPGAPQRVLKTTFYDQWKNLPEQETEENQPIIGHTIIHGV 270



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>AK100705:Os08g0485400 |
          Length = 206

 Score =  222 bits (565), Expect = 9e-58
 Identities = 121/204 (59%), Positives = 127/204 (62%)
 Frame = +1

Query: 34  MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWVPRSXXXXXXXXXXX 213
           MGWKGI+GFD+GVVQAPLGPDISGPEL         IGLLRLPDW               
Sbjct: 1   MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDW--------------- 45

Query: 214 XG*SPEPPTCLQPAPDHVRELIRRTRSLTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXX 393
                       PAPD VR+LIRRTRSLTE+PFGAAIVLAFPH                 
Sbjct: 46  ------------PAPDRVRDLIRRTRSLTERPFGAAIVLAFPHEENLRVVLEEKLAVLQV 93

Query: 394 YWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXX 573
           YWGEFP+ERVDEAH AGVKVLHQVG  EEAAKAKEAGVDGII+QG EAGGHVIGQEG   
Sbjct: 94  YWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLP 153

Query: 574 XXXXXXXXXXXXXXXXIAAGGIVD 645
                           IAAGGIVD
Sbjct: 154 LLPRVVDLVSDTDISVIAAGGIVD 177



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>AK109964: |
          Length = 589

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 47/201 (23%), Positives = 72/201 (35%), Gaps = 15/201 (7%)
 Frame = +1

Query: 247 QPAPDHVRELIRRTRSLT--------EKPFGAAIV-------LAFPHXXXXXXXXXXXXX 381
           QP+P+ +R+ IR T+SL         E  +G+  V       +  P              
Sbjct: 47  QPSPEALRKAIRETKSLISEDIRKEREGKYGSFAVNITLLPSINPPDYVGYAKAALEEGV 106

Query: 382 XXXXYWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQE 561
                 G  P E +     AG  V+H+   +  A  A+  G D + I G E  GH    E
Sbjct: 107 RIFETAGNNPGEVIKVVKAAGAYVIHKCTAVRHARSAERLGADMLSIDGFECAGH--PGE 164

Query: 562 GXXXXXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXXXXXXXXXXXTRFVATEESFAHPL 741
                               IA+GGI +                  TRF+ T+ES  H  
Sbjct: 165 DDIGGLVLMARAAEELKIPFIASGGIANGQGLASALALGAVGANMGTRFMCTKESEIHDN 224

Query: 742 YKKKLIEMNCTDYTNVFGRAR 804
            K+ ++E +  + T++F   R
Sbjct: 225 IKRAIVESDERNTTHIFRTLR 245



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>AK110223:Os01g0329300 |
          Length = 759

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = -3

Query: 638 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPS-TPASLAFAASSRSPT 462
           IPPAA+ K       S        RP  P T PP S P  + P+  P + A A +   PT
Sbjct: 256 IPPAAMPKPP-----SVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPT 310

Query: 461 *CKTLTPARWASSTRSLGNSP 399
               L PA  A S ++  +SP
Sbjct: 311 TPPALPPATTAPSPKNSSSSP 331



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>AK070848:Os01g0141900 |
          Length = 606

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
 Frame = -3

Query: 620 TKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSR---------- 471
           T T  S   +T   +  SRPS P    P SR      STP     A S++          
Sbjct: 285 TPTSRSSIPATRSSTPSSRPSIPAQSKPVSRS-----STPTRRPSATSTQHGSLAAPVRS 339

Query: 470 ------SPT*CKTLTPARWASSTRSLGNSP 399
                 +PT  K+ +PA+  +ST S G+SP
Sbjct: 340 TSISKPAPTMSKSSSPAKTIASTPSRGSSP 369



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>AK110196:Os05g0516400 |
          Length = 827

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = -3

Query: 638 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT* 459
           +PPA    +  +     T   + + P  P T PP+  P   +PS P   A A +++ P  
Sbjct: 166 LPPATSPPSPANPLPPATSPPSPANPLPPTTSPPSPAPPPTVPSQPPEAAPAPTTKPPP- 224

Query: 458 CKTLTPAR 435
              L PAR
Sbjct: 225 -TPLPPAR 231



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>AK070117:Os06g0572000 |
          Length = 85

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -3

Query: 563 PS*PITCPPASRP*MIIPS-----TPASLAFAASSRSPT*CKTLTPARWASSTRSLGN 405
           PS   T PP +   ++ PS      PASLAF +   +P+ C  L      +++RSLG+
Sbjct: 22  PSDATTLPPPTLADLLHPSHRDAAPPASLAFGSPPPAPSLCDPLAIFDTVAASRSLGS 79



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>AK109861:Os12g0117500 |
          Length = 173

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 466 GDLEEAAKAKEAGVDGIIIQGREAGGH 546
           GD+EEAA+  E G +G +++GRE G H
Sbjct: 62  GDMEEAAE--ERGGEGRVVRGREHGNH 86



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>AK110283: |
          Length = 501

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -3

Query: 638 IPPAAITKTVLSETRSTTLG-SNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 462
           +PP+  T +    T S + G  +   P+ PI  PP+S P   IP+TPA      ++ + T
Sbjct: 311 LPPSGSTSSPTGSTSSPSGGIPHHVPPNKPIPAPPSS-PLPPIPTTPAPTPTPTATPTAT 369

Query: 461 *CKTLTPA 438
              T+ PA
Sbjct: 370 PTTTVPPA 377



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>AY360145:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489



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>AK104336:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489



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>AK066168:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 55,941,342
Number of extensions: 1219819
Number of successful extensions: 3485
Number of sequences better than 10.0: 12
Number of HSP's gapped: 3477
Number of HSP's successfully gapped: 12
Length of query: 717
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 609
Effective length of database: 11,075,427
Effective search space: 6744935043
Effective search space used: 6744935043
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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