| Clone Name | FLbaf48e19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068155:Os08g0485400 | 354 | 2e-97 | 2 | AK100705:Os08g0485400 | 222 | 9e-58 | 3 | AK109964: | 46 | 1e-04 | 4 | AK110223:Os01g0329300 | 33 | 1.1 | 5 | AK070848:Os01g0141900 | 32 | 2.3 | 6 | AK110196:Os05g0516400 | 31 | 4.0 | 7 | AK070117:Os06g0572000 | 30 | 5.2 | 8 | AK109861:Os12g0117500 | 30 | 5.2 | 9 | AK110283: | 30 | 6.8 | 10 | AY360145:Os05g0148600 | 30 | 8.9 | 11 | AK104336:Os05g0148600 | 30 | 8.9 | 12 | AK066168:Os05g0148600 | 30 | 8.9 |
|---|
>AK068155:Os08g0485400 | Length = 280 Score = 354 bits (908), Expect = 2e-97 Identities = 185/297 (62%), Positives = 197/297 (66%) Frame = +1 Query: 34 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWVPRSXXXXXXXXXXX 213 MGWKGI+GFD+GVVQAPLGPDISGPEL IGLLRLPDW Sbjct: 1 MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDW--------------- 45 Query: 214 XG*SPEPPTCLQPAPDHVRELIRRTRSLTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXX 393 PAPD VR+LIRRTRSLTE+PFGAAIVLAFPH Sbjct: 46 ------------PAPDRVRDLIRRTRSLTERPFGAAIVLAFPHEENLRVVLEEKLAVLQV 93 Query: 394 YWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXX 573 YWGEFP+ERVDEAH AGVKVLHQVG EEAAKAKEAGVDGII+QG EAGGHVIGQEG Sbjct: 94 YWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLP 153 Query: 574 XXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXXXXXXXXXXXTRFVATEESFAHPLYKKK 753 IAAGGIVD TRF+ TEESFAHPLYKK+ Sbjct: 154 LLPRVVDLVSDTDISVIAAGGIVDGRGYAAALALGAQGVCLGTRFLTTEESFAHPLYKKR 213 Query: 754 LIEMNCTDYTNVFGRARWPGAPQRVLKTPFYVEWKNLPDHETEENQPIIGHSIIHGV 924 LIE+NCT YTNVFGRARWPGAPQRVLKT FY +WKNLP+ ETEENQPIIGH+IIHGV Sbjct: 214 LIEINCTGYTNVFGRARWPGAPQRVLKTTFYDQWKNLPEQETEENQPIIGHTIIHGV 270
>AK100705:Os08g0485400 | Length = 206 Score = 222 bits (565), Expect = 9e-58 Identities = 121/204 (59%), Positives = 127/204 (62%) Frame = +1 Query: 34 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWVPRSXXXXXXXXXXX 213 MGWKGI+GFD+GVVQAPLGPDISGPEL IGLLRLPDW Sbjct: 1 MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDW--------------- 45 Query: 214 XG*SPEPPTCLQPAPDHVRELIRRTRSLTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXX 393 PAPD VR+LIRRTRSLTE+PFGAAIVLAFPH Sbjct: 46 ------------PAPDRVRDLIRRTRSLTERPFGAAIVLAFPHEENLRVVLEEKLAVLQV 93 Query: 394 YWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXX 573 YWGEFP+ERVDEAH AGVKVLHQVG EEAAKAKEAGVDGII+QG EAGGHVIGQEG Sbjct: 94 YWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLP 153 Query: 574 XXXXXXXXXXXXXXXXIAAGGIVD 645 IAAGGIVD Sbjct: 154 LLPRVVDLVSDTDISVIAAGGIVD 177
>AK109964: | Length = 589 Score = 45.8 bits (107), Expect = 1e-04 Identities = 47/201 (23%), Positives = 72/201 (35%), Gaps = 15/201 (7%) Frame = +1 Query: 247 QPAPDHVRELIRRTRSLT--------EKPFGAAIV-------LAFPHXXXXXXXXXXXXX 381 QP+P+ +R+ IR T+SL E +G+ V + P Sbjct: 47 QPSPEALRKAIRETKSLISEDIRKEREGKYGSFAVNITLLPSINPPDYVGYAKAALEEGV 106 Query: 382 XXXXYWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKAKEAGVDGIIIQGREAGGHVIGQE 561 G P E + AG V+H+ + A A+ G D + I G E GH E Sbjct: 107 RIFETAGNNPGEVIKVVKAAGAYVIHKCTAVRHARSAERLGADMLSIDGFECAGH--PGE 164 Query: 562 GXXXXXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXXXXXXXXXXXTRFVATEESFAHPL 741 IA+GGI + TRF+ T+ES H Sbjct: 165 DDIGGLVLMARAAEELKIPFIASGGIANGQGLASALALGAVGANMGTRFMCTKESEIHDN 224 Query: 742 YKKKLIEMNCTDYTNVFGRAR 804 K+ ++E + + T++F R Sbjct: 225 IKRAIVESDERNTTHIFRTLR 245
>AK110223:Os01g0329300 | Length = 759 Score = 32.7 bits (73), Expect = 1.1 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = -3 Query: 638 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPS-TPASLAFAASSRSPT 462 IPPAA+ K S RP P T PP S P + P+ P + A A + PT Sbjct: 256 IPPAAMPKPP-----SVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPT 310 Query: 461 *CKTLTPARWASSTRSLGNSP 399 L PA A S ++ +SP Sbjct: 311 TPPALPPATTAPSPKNSSSSP 331
>AK070848:Os01g0141900 | Length = 606 Score = 31.6 bits (70), Expect = 2.3 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 16/90 (17%) Frame = -3 Query: 620 TKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSR---------- 471 T T S +T + SRPS P P SR STP A S++ Sbjct: 285 TPTSRSSIPATRSSTPSSRPSIPAQSKPVSRS-----STPTRRPSATSTQHGSLAAPVRS 339 Query: 470 ------SPT*CKTLTPARWASSTRSLGNSP 399 +PT K+ +PA+ +ST S G+SP Sbjct: 340 TSISKPAPTMSKSSSPAKTIASTPSRGSSP 369
>AK110196:Os05g0516400 | Length = 827 Score = 30.8 bits (68), Expect = 4.0 Identities = 20/68 (29%), Positives = 30/68 (44%) Frame = -3 Query: 638 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT* 459 +PPA + + T + + P P T PP+ P +PS P A A +++ P Sbjct: 166 LPPATSPPSPANPLPPATSPPSPANPLPPTTSPPSPAPPPTVPSQPPEAAPAPTTKPPP- 224 Query: 458 CKTLTPAR 435 L PAR Sbjct: 225 -TPLPPAR 231
>AK070117:Os06g0572000 | Length = 85 Score = 30.4 bits (67), Expect = 5.2 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 563 PS*PITCPPASRP*MIIPS-----TPASLAFAASSRSPT*CKTLTPARWASSTRSLGN 405 PS T PP + ++ PS PASLAF + +P+ C L +++RSLG+ Sbjct: 22 PSDATTLPPPTLADLLHPSHRDAAPPASLAFGSPPPAPSLCDPLAIFDTVAASRSLGS 79
>AK109861:Os12g0117500 | Length = 173 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +1 Query: 466 GDLEEAAKAKEAGVDGIIIQGREAGGH 546 GD+EEAA+ E G +G +++GRE G H Sbjct: 62 GDMEEAAE--ERGGEGRVVRGREHGNH 86
>AK110283: | Length = 501 Score = 30.0 bits (66), Expect = 6.8 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -3 Query: 638 IPPAAITKTVLSETRSTTLG-SNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 462 +PP+ T + T S + G + P+ PI PP+S P IP+TPA ++ + T Sbjct: 311 LPPSGSTSSPTGSTSSPSGGIPHHVPPNKPIPAPPSS-PLPPIPTTPAPTPTPTATPTAT 369 Query: 461 *CKTLTPA 438 T+ PA Sbjct: 370 PTTTVPPA 377
>AY360145:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489
>AK104336:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489
>AK066168:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 447 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 343 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 55,941,342 Number of extensions: 1219819 Number of successful extensions: 3485 Number of sequences better than 10.0: 12 Number of HSP's gapped: 3477 Number of HSP's successfully gapped: 12 Length of query: 717 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 609 Effective length of database: 11,075,427 Effective search space: 6744935043 Effective search space used: 6744935043 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)