ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf48e16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9JK95:PERP_MOUSE p53 apoptosis effector related to PMP-22 - Mus... 32 3.3
2Q96FX8:PERP_HUMAN p53 apoptosis effector related to PMP-22 - Hom... 32 4.3

>Q9JK95:PERP_MOUSE p53 apoptosis effector related to PMP-22 - Mus musculus (Mouse)|
          Length = 193
 Score = 32.3 bits (72), Expect = 3.3
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -2

Query: 668 CKHTQVIYLRVVGGSMHLSSIVLVHDLTAYPVKH 567
           C    +++LRV+GG + L++I  +  L  YPVK+
Sbjct: 100 CGPQMLVFLRVIGGLLALAAIFQIISLVIYPVKY 133



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>Q96FX8:PERP_HUMAN p53 apoptosis effector related to PMP-22 - Homo sapiens (Human)|
          Length = 193

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 668 CKHTQVIYLRVVGGSMHLSSIVLVHDLTAYPVKH 567
           C    +++LRV+GG + L+++  +  L  YPVK+
Sbjct: 100 CGPQMLVFLRVIGGLLALAAVFQIISLVIYPVKY 133


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 192,104,053
Number of extensions: 4248984
Number of successful extensions: 10494
Number of sequences better than 10.0: 2
Number of HSP's gapped: 10491
Number of HSP's successfully gapped: 2
Length of query: 347
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 233
Effective length of database: 69,416,809
Effective search space: 16174116497
Effective search space used: 16174116497
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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