| Clone Name | FLbaf48e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017443.1| Zea mays clone EL01N0405B09.c mRNA sequence Length = 518 Score = 331 bits (167), Expect = 1e-87 Identities = 203/215 (94%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 79 caccatgccgaagcagatccacgagatcaaggacttcctgctgactgcgcggcggaagga 138 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 139 cgcacggtcggtgcggatcaagcgggccaaggacgccgtcaagttcaaggtgcgctgctc 198 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 199 caggtacctctacaccctctgcgtccacgacgccgacaaggccaacaagctcaagcagtc 258 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaag 293 ||||| |||||| ||| |||||||||| |||||| Sbjct: 259 gctcccgccaggtctgactgtccaggagatttaag 293
>gb|AY109122.1| Zea mays PCO066751 mRNA sequence Length = 626 Score = 331 bits (167), Expect = 1e-87 Identities = 203/215 (94%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 86 caccatgccgaagcagatccacgagatcaaggacttcctgctgactgcgcggcggaagga 145 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 ||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 146 cgcacggtcggtgcggatcaagcgggccaaggacgccgtcaagttcaaggtgcgctgctc 205 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 206 caggtacctctacaccctctgcgtccacgacgccgacaaggccaacaagctcaagcagtc 265 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaag 293 ||||| |||||| ||| |||||||||| |||||| Sbjct: 266 gctcccgccaggtctgactgtccaggagatttaag 300
>emb|CT830449.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220I18, full insert sequence Length = 540 Score = 325 bits (164), Expect = 9e-86 Identities = 203/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 85 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 144 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 145 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcggtgctc 204 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 205 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 264 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 ||||| |||||||||| |||||||||||||||||| Sbjct: 265 gctccccccaggtttgactgtccaggaggtttaagc 300
>emb|CT828160.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA010O05, full insert sequence Length = 560 Score = 325 bits (164), Expect = 9e-86 Identities = 203/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 79 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 138 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 cgcgaggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 199 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 258 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 ||||| |||||||||| |||||||||||||||||| Sbjct: 259 gctccccccaggtttgactgtccaggaggtttaagc 294
>ref|NM_001074333.1| Oryza sativa (japonica cultivar-group) Os11g0433900 (Os11g0433900) mRNA, complete cds Length = 486 Score = 325 bits (164), Expect = 9e-86 Identities = 203/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 82 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 141 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcggtgctc 201 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 202 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 261 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 ||||| |||||||||| |||||||||||||||||| Sbjct: 262 gctccccccaggtttgactgtccaggaggtttaagc 297
>dbj|AK059679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H04, full insert sequence Length = 486 Score = 325 bits (164), Expect = 9e-86 Identities = 203/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 82 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 141 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcggtgctc 201 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 202 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 261 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 ||||| |||||||||| |||||||||||||||||| Sbjct: 262 gctccccccaggtttgactgtccaggaggtttaagc 297
>gb|U86017.1|OSU86017 Oryza sativa ribosomal protein mRNA, complete cds Length = 518 Score = 311 bits (157), Expect = 1e-81 Identities = 203/217 (93%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaagg-actttttgctgacggcgcggcggaagg 137 |||||||||||||||||||||||||||||||| |||| | ||||||||| || |||||| Sbjct: 45 caccatgccgaagcagatccacgagatcaagggacttcctcctgacggcgaggaggaagg 104 Query: 138 acgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgct 197 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105 acgcgaggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgct 164 Query: 198 ccaggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagt 257 ||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 165 ccaagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagt 224 Query: 258 ccctcccaccaggtttgaatgtccaggaggtttaagc 294 | ||||| |||||||||| |||||||||||||||||| Sbjct: 225 cgctccccccaggtttgactgtccaggaggtttaagc 261
>dbj|AK241215.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065123C18, full insert sequence Length = 1193 Score = 309 bits (156), Expect = 5e-81 Identities = 201/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 58 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 117 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 cgcgaggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 177 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 178 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 237 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 || || || ||||||| |||||||||||||||||| Sbjct: 238 gcttcccccgggtttgactgtccaggaggtttaagc 273
>ref|NM_001066460.1| Oryza sativa (japonica cultivar-group) Os07g0546700 (Os07g0546700) mRNA, partial cds Length = 498 Score = 309 bits (156), Expect = 5e-81 Identities = 201/216 (93%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 44 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 103 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 cgcgaggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 163 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 164 caagtacctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 223 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 || || || ||||||| |||||||||||||||||| Sbjct: 224 gcttcccccgggtttgactgtccaggaggtttaagc 259
>dbj|AK058262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-H07, full insert sequence Length = 508 Score = 301 bits (152), Expect = 1e-78 Identities = 200/216 (92%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 71 caccatgccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaagga 130 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 cgcgaggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 190 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| Sbjct: 191 caagtacctctacaccctctgcgtcttcgacgccgacaaggccgacaagctcaagcagtc 250 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 || || || ||||||| |||||||||||||||||| Sbjct: 251 gcttcccccgggtttgactgtccaggaggtttaagc 286
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 276 bits (139), Expect = 7e-71 Identities = 175/187 (93%) Strand = Plus / Plus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 50022 gccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaaggacgcgcg 50081 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 50082 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcggtgctccaagta 50141 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctccc 264 ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| Sbjct: 50142 cctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtcgctccc 50201 Query: 265 accaggt 271 |||||| Sbjct: 50202 cccaggt 50208 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 267 caggtttgaatgtccaggaggtttaagc 294 ||||||||| |||||||||||||||||| Sbjct: 51062 caggtttgactgtccaggaggtttaagc 51089
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 276 bits (139), Expect = 7e-71 Identities = 175/187 (93%) Strand = Plus / Plus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||| Sbjct: 13465463 gccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaaggacgcgcg 13465522 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 13465523 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcggtgctccaagta 13465582 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctccc 264 ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| Sbjct: 13465583 cctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtcgctccc 13465642 Query: 265 accaggt 271 |||||| Sbjct: 13465643 cccaggt 13465649 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 267 caggtttgaatgtccaggaggtttaagc 294 ||||||||| |||||||||||||||||| Sbjct: 13466503 caggtttgactgtccaggaggtttaagc 13466530
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 266 bits (134), Expect = 7e-68 Identities = 164/174 (94%) Strand = Plus / Minus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||| | Sbjct: 21620367 gccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaaggacgcgag 21620308 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 21620307 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaagta 21620248 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 ||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 21620247 cctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 21620194 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 267 caggtttgaatgtccaggaggtttaagc 294 ||||||||| |||||||||||||||||| Sbjct: 21619312 caggtttgactgtccaggaggtttaagc 21619285
>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1612_A04 Length = 124833 Score = 266 bits (134), Expect = 7e-68 Identities = 164/174 (94%) Strand = Plus / Minus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||| | Sbjct: 50823 gccgaagcagatccacgagatcaaggacttcctcctgacggcgaggaggaaggacgcgag 50764 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 50763 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaagta 50704 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 ||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 50703 cctctacaccctctgcgtcttcgacgccgacaaggccaacaagctcaagcagtc 50650 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 267 caggtttgaatgtccaggaggtttaagc 294 ||||||||| |||||||||||||||||| Sbjct: 49768 caggtttgactgtccaggaggtttaagc 49741
>dbj|D29724.1|RICYK37 Oryza sativa mRNA, partial homologous to ribosomal protein L38 gene Length = 304 Score = 226 bits (114), Expect = 6e-56 Identities = 188/216 (87%) Strand = Plus / Plus Query: 79 caccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagga 138 |||||||||||||||||||||||| ||||||||||| | ||||||||| || ||||||| Sbjct: 51 caccatgccgaagcagatccacganatcaaggacttcctcctgacggcgaggaggaagga 110 Query: 139 cgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctc 198 || |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| Sbjct: 111 cgnnaggtcggtgcggatcaanaggnccaaggacgacgtcaagttcaaggtgcgctgctc 170 Query: 199 caggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtc 258 || ||||||||||||||||||| || | || | |||||||||| ||||||||||||||| Sbjct: 171 caagtacctctacaccctctgcntcttcnacgcagacaaggccancaagctcaagcagtc 230 Query: 259 cctcccaccaggtttgaatgtccaggaggtttaagc 294 | || || ||||| |||||||||||||||||| Sbjct: 231 gnttcccccgggtttanctgtccaggaggtttaagc 266
>ref|NM_001062525.1| Oryza sativa (japonica cultivar-group) Os05g0507200 (Os05g0507200) mRNA, complete cds Length = 210 Score = 186 bits (94), Expect = 5e-44 Identities = 181/210 (86%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | || || ||| || ||||||| || Sbjct: 1 atgccgaagcaaatccatgagatcaaggacttccttctcacagcgaggaggaaggatgcc 60 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 || || ||| |||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 61 cgctccgtgaggatcaagaggagcaaggatgccgtcaagttcaaggtgcgctgctccagg 120 Query: 203 tacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctc 262 ||||||||||| || || || || ||||| ||||||||||||||||| |||||||| ||| Sbjct: 121 tacctctacacgctgtgtgtacatgacactgacaaggccaacaagctgaagcagtctctc 180 Query: 263 ccaccaggtttgaatgtccaggaggtttaa 292 || ||||| |||| || |||||||||||| Sbjct: 181 cccccaggcttgaccgttcaggaggtttaa 210
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 172 bits (87), Expect = 8e-40 Identities = 162/187 (86%) Strand = Plus / Plus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 ||||||||| ||||| |||||||||||||| | || || ||| || ||||||| || || Sbjct: 39601 gccgaagcaaatccatgagatcaaggacttccttctcacagcgaggaggaaggatgcccg 39660 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 || ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 39661 ctccgtgaggatcaagaggagcaaggatgccgtcaagttcaaggtgcgctgctccaggta 39720 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctccc 264 ||||||||| || || || || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 39721 cctctacacgctgtgtgtacatgacactgacaaggccaacaagctgaagcagtctctccc 39780 Query: 265 accaggt 271 |||||| Sbjct: 39781 cccaggt 39787
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 172 bits (87), Expect = 8e-40 Identities = 162/187 (86%) Strand = Plus / Plus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 ||||||||| ||||| |||||||||||||| | || || ||| || ||||||| || || Sbjct: 24852716 gccgaagcaaatccatgagatcaaggacttccttctcacagcgaggaggaaggatgcccg 24852775 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 || ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 24852776 ctccgtgaggatcaagaggagcaaggatgccgtcaagttcaaggtgcgctgctccaggta 24852835 Query: 205 cctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctccc 264 ||||||||| || || || || ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 24852836 cctctacacgctgtgtgtacatgacactgacaaggccaacaagctgaagcagtctctccc 24852895 Query: 265 accaggt 271 |||||| Sbjct: 24852896 cccaggt 24852902
>emb|CT983616.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 541 Score = 107 bits (54), Expect = 4e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 80 accatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggac 139 |||||||||||||| ||||||||||||||||| ||| | || || || ||||||||||| Sbjct: 33 accatgccgaagcaaatccacgagatcaaggattttctcctcactgcaaggcggaaggac 92 Query: 140 gcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctcc 199 || ||||| || |||||||||| |||||| | |||||||||||||| ||||||||| Sbjct: 93 gcccggtctgtcaaaatcaagaggagcaaggatgttgtcaagttcaaggttcgctgctcc 152 Query: 200 aggtacctctacac 213 | |||||||||||| Sbjct: 153 aagtacctctacac 166
>gb|BT017653.1| Zea mays clone EL01N0440A01.c mRNA sequence Length = 442 Score = 107 bits (54), Expect = 4e-20 Identities = 168/206 (81%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||||||||| ||||| |||||||| | || || ||| || ||||||| || Sbjct: 60 atgccgaagcagatccatgagattaaggacttcctcctcaccgcgaggaggaaggatgcc 119 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 || || ||| ||||||||||| |||||| | ||||||||||||||||||||||||| | Sbjct: 120 cgctcagtgaagatcaagaggagcaaggatgttgtcaagttcaaggtgcgctgctccaag 179 Query: 203 tacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctc 262 ||| | ||||| ||||||||| ||| | || ||||| ||||||||| |||| || || Sbjct: 180 tacttgtacacgctctgcgtcttcgatgctgagaaggcaaacaagctccagcaatctctt 239 Query: 263 ccaccaggtttgaatgtccaggaggt 288 || |||||||||| ||| ||||||| Sbjct: 240 cccccaggtttgaccgtcgaggaggt 265
>gb|AY171232.1| Chlamydomonas reinhardtii 60S ribosomal protein L38 mRNA, complete cds Length = 312 Score = 97.6 bits (49), Expect = 4e-17 Identities = 148/181 (81%) Strand = Plus / Plus Query: 78 tcaccatgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaagg 137 ||||||||||||||||||| ||||||||||||||| | ||||| || || || |||| Sbjct: 3 tcaccatgccgaagcagattaccgagatcaaggacttcctcctgaccgcccgtcgcaagg 62 Query: 138 acgcgcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgct 197 |||||||||||||| ||| |||| |||| | || |||||||||||| ||||||| Sbjct: 63 acgcgcggtcggtgaagattaagaagaccggcagcaccaccaagttcaaggtccgctgct 122 Query: 198 ccaggtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagt 257 ||| |||||| ||||| |||||||| ||| | ||||||||| ||||||||||||||| Sbjct: 123 ccaagtacctgtacacgctctgcgtggctgactcggacaaggccgacaagctcaagcagt 182 Query: 258 c 258 | Sbjct: 183 c 183
>emb|CT985407.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 392 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 82 catgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgc 141 |||||||||||| ||||||||||||||||| || | || || || || ||||||| || Sbjct: 55 catgccgaagcaaatccacgagatcaaggatttcctcctcactgctaggaggaaggatgc 114 Query: 142 gcggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccag 201 || || ||| ||||||||||| |||||| | || ||||||||||| |||||||||| Sbjct: 115 acgctctgtgaagatcaagaggagcaaggatgtggtgaagttcaaggttcgctgctccaa 174 Query: 202 gtacctctacaccctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccct 261 |||||||||||| || |||||| ||| |||| |||||| ||||| | ||||| || || Sbjct: 175 gtacctctacacactttgcgtctttgactccgagaaggccgacaagttgaagcaatctct 234 Query: 262 cccaccaggtttga 275 || |||||||||| Sbjct: 235 tcctccaggtttga 248
>gb|DQ214236.1| Taeniopygia guttata clone 0061P0012B01 ribosomal protein L38-like mRNA, complete sequence Length = 362 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| Sbjct: 82 gagatcaaggacttcctgctgacggcgcggcggaaggacgccaagtctgtcaagatcaag 141 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || ||||||| || ||||||||||| |||||| | |||||||||||||||| Sbjct: 142 aagaacaaggacaatgtgaagttcaaggtacgctgcagccggtacctctacaccct 197
>gb|DQ214235.1| Taeniopygia guttata clone 0061P0008B02 ribosomal protein L38-like mRNA, complete sequence Length = 362 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| Sbjct: 82 gagatcaaggacttcctgctgacggcgcggcggaaggacgccaagtctgtcaagatcaag 141 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || ||||||| || ||||||||||| |||||| | |||||||||||||||| Sbjct: 142 aagaacaaggacaatgtgaagttcaaggtacgctgcagccggtacctctacaccct 197
>gb|DQ214234.1| Taeniopygia guttata clone 0061P0009C10 ribosomal protein L38-like mRNA, complete sequence Length = 352 Score = 79.8 bits (40), Expect = 9e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| Sbjct: 72 gagatcaaggacttcctgctgacggcgcggcggaaggacgccaagtctgtcaagatcaag 131 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || ||||||| || ||||||||||| |||||| | |||||||||||||||| Sbjct: 132 aagaacaaggacaatgtgaagttcaaggtacgctgcagccggtacctctacaccct 187
>gb|DQ214237.1| Taeniopygia guttata clone 0058P0043B03 ribosomal protein L38-like mRNA, complete sequence Length = 357 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 |||||||||||||| ||||||||||||||||||||||||| ||| || ||||||| Sbjct: 78 gagatcaaggacttcctgctgacggcgcggcggaaggacgccaagtctgtcaagatcaag 137 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || ||||||| || ||||| ||||| |||||| | |||||||||||||||| Sbjct: 138 aagaacaaggacaatgtgaagtttaaggtacgctgcagccggtacctctacaccct 193
>ref|NM_074459.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-38) (rpl-38) mRNA, complete cds Length = 323 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccctctgcgtccacgacaccgacaa 237 |||||||||||| |||||| |||| ||||||||||||||| |||| ||||| || || Sbjct: 112 caagttcaaggttcgctgcgccagctacctctacaccctcgtcgtcgccgacaaggataa 171 Query: 238 ggccaacaagctcaagcagtccctcccaccagg 270 |||| | ||||| ||||| ||||| |||||||| Sbjct: 172 ggccgagaagctgaagcaatcccttccaccagg 204
>gb|DQ848929.1| Scophthalmus maximus clone saa393 60S ribosomal protein L38 mRNA, partial cds Length = 287 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| |||||||||||||||||||||| ||||||||| ||||| Sbjct: 78 gatcaagaagaacaaggacaacgtcaagttcaaggtgcgctgcagcaggtacctgtacac 137
>gb|DQ222501.1| Solanum tuberosum clone 106F12 ribosomal protein L38-like mRNA, complete cds Length = 483 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 176 gtcaagttcaaggtgcgctgctccaggtacctctacaccctctg 219 |||||||||||||| |||||||||| |||||||||||| ||||| Sbjct: 132 gtcaagttcaaggttcgctgctccaagtacctctacacactctg 175 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaagga 111 ||||| ||||| ||||||||||||||||| Sbjct: 39 atgcctaagcaaatccacgagatcaagga 67
>ref|NM_115816.3| Arabidopsis thaliana structural constituent of ribosome (AT3G59540) mRNA, complete cds Length = 493 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || Sbjct: 65 atgccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgca 124 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 |||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||| Sbjct: 125 aggtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaagg 184 Query: 203 tacctctacac 213 ||||||||||| Sbjct: 185 tacctctacac 195
>gb|BT000853.1| Arabidopsis thaliana At3g59540/T16L24_90 mRNA, complete cds Length = 210 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || Sbjct: 1 atgccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgca 60 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 |||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||| Sbjct: 61 aggtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaagg 120 Query: 203 tacctctacac 213 ||||||||||| Sbjct: 121 tacctctacac 131
>gb|AF361841.1| Arabidopsis thaliana AT3g59540/T16L24_90 mRNA, complete cds Length = 413 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || Sbjct: 45 atgccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgca 104 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 |||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||| Sbjct: 105 aggtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaagg 164 Query: 203 tacctctacac 213 ||||||||||| Sbjct: 165 tacctctacac 175
>emb|BX822447.1|CNS0A704 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 399 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || Sbjct: 30 atgccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgca 89 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 |||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||| Sbjct: 90 aggtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaagg 149 Query: 203 tacctctacac 213 ||||||||||| Sbjct: 150 tacctctacac 160
>emb|BX822840.1|CNS0A4V1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 416 Score = 61.9 bits (31), Expect = 2e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || Sbjct: 65 atgccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgca 124 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 |||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||| Sbjct: 125 aggtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaagg 184 Query: 203 tacctctacac 213 ||||||||||| Sbjct: 185 tacctctacac 195
>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24 Length = 91851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 104/129 (80%) Strand = Plus / Minus Query: 85 gccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcgcg 144 ||||||||| ||||| |||||||||||||| | |||||||| | ||||||| || | Sbjct: 19358 gccgaagcaaatccatgagatcaaggacttccttttgacggcgagaaggaaggatgcaag 19299 Query: 145 gtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggta 204 ||| ||| ||||||||| | ||||||| || ||||||||||| | ||||| ||||| Sbjct: 19298 gtctgtgaagatcaagagaagcaaggacattgtgaagttcaaggtcaggtgctcaaggta 19239 Query: 205 cctctacac 213 ||||||||| Sbjct: 19238 cctctacac 19230
>ref|NM_001048057.1| Mus musculus ribosomal protein L38 (Rpl38), transcript variant 1, mRNA Length = 387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 134 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 193 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 194 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 249
>ref|NM_001048058.1| Mus musculus ribosomal protein L38 (Rpl38), transcript variant 3, mRNA Length = 313 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 60 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 119 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 120 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 175
>ref|NM_023372.2| Mus musculus ribosomal protein L38 (Rpl38), transcript variant 2, mRNA Length = 370 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 117 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 176 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 177 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 232
>ref|XM_990647.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC672023), mRNA Length = 343 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 74 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 133 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 134 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 189
>ref|XM_973154.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC664868), mRNA Length = 353 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 84 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 143 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 144 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 199
>ref|XM_978287.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC674951), mRNA Length = 353 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 84 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 143 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 144 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 199
>gb|BC081447.1| Mus musculus cDNA clone IMAGE:6410834 Length = 293 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 34 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 93 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 94 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 149
>gb|BC055346.1| Mus musculus ribosomal protein L38, mRNA (cDNA clone MGC:65221 IMAGE:5003663), complete cds Length = 320 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 69 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 128 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 129 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 184
>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence Length = 182955 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Minus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 153867 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 153808 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 153807 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 153752
>gb|BC047046.1| Mus musculus cDNA clone IMAGE:5148189, partial cds Length = 330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 60 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 119 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 120 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 175
>gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205702 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 186243 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 186302 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 186303 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 186358
>dbj|AK151517.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031E13 product:ribosomal protein L38, full insert sequence Length = 306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 71 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 130 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 131 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 186
>dbj|AK010518.2| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410016I09 product:RIBOSOMAL PROTEIN L38 (0610025G13RIK PROTEIN), full insert sequence Length = 304 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 70 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 129 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 130 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 185
>dbj|AK010277.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400004B14 product:RIBOSOMAL PROTEIN L38 (0610025G13RIK PROTEIN) homolog [Mus musculus], full insert sequence Length = 306 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 71 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 130 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 131 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 186
>dbj|AK002659.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610025G13 product:RIBOSOMAL PROTEIN L38 homolog [Ictalurus punctatus], full insert sequence Length = 319 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 84 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 143 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 144 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 199
>emb|Z81463.2|CEC06B8 Caenorhabditis elegans Cosmid C06B8, complete sequence Length = 38861 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccctc 217 |||||||||||| |||||| |||| ||||||||||||||| Sbjct: 35757 caagttcaaggttcgctgcgccagctacctctacaccctc 35796
>dbj|AK012391.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700048C22 product:RIBOSOMAL PROTEIN L38 (0610025G13RIK PROTEIN) homolog [Mus musculus], full insert sequence Length = 305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 70 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 129 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 130 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 185
>emb|CR731322.2|CNS0GR8F Tetraodon nigroviridis full-length cDNA Length = 309 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 121 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 180
>emb|CR733947.2|CNS0GT3E Tetraodon nigroviridis full-length cDNA Length = 314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 124 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 183
>emb|CR720840.2|CNS0GJ5A Tetraodon nigroviridis full-length cDNA Length = 312 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 124 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 183
>emb|CR714520.2|CNS0GE9W Tetraodon nigroviridis full-length cDNA Length = 300 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 112 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 171
>emb|CR706544.2|CNS0G84C Tetraodon nigroviridis full-length cDNA Length = 461 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 273 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 332
>emb|CR702040.2|CNS0G4N8 Tetraodon nigroviridis full-length cDNA Length = 311 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 123 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 182
>emb|CR693789.2|CNS0FYA1 Tetraodon nigroviridis full-length cDNA Length = 308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 121 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 180
>emb|CR689142.2|CNS0FUOY Tetraodon nigroviridis full-length cDNA Length = 308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 122 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 181
>emb|CR657205.2|CNS0F62J Tetraodon nigroviridis full-length cDNA Length = 493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 309 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 368
>emb|CR648408.2|CNS0EZA6 Tetraodon nigroviridis full-length cDNA Length = 310 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 124 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 183
>emb|CR646155.2|CNS0EXJL Tetraodon nigroviridis full-length cDNA Length = 470 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 282 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 341
>emb|CR639432.2|CNS0ESCU Tetraodon nigroviridis full-length cDNA Length = 310 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 124 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 183
>emb|CR632660.2|CNS0EN4Q Tetraodon nigroviridis full-length cDNA Length = 289 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 117 gatcaagaagaacaaggacaacgtaaagttcaaggtgcgctgcagcaggtacctgtacac 176
>gb|BC034339.1| Mus musculus ribosomal protein L38, mRNA (cDNA clone MGC:18738 IMAGE:3985781), complete cds Length = 330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 73 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 132 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 133 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 188
>gb|BC094644.1| Mus musculus ribosomal protein L38, mRNA (cDNA clone MGC:106983 IMAGE:3328874), complete cds Length = 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 66 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 125 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 126 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 181
>gb|BC094258.1| Mus musculus ribosomal protein L38, mRNA (cDNA clone MGC:106982 IMAGE:1245753), complete cds Length = 350 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 65 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 124 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 125 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 180
>emb|X69979.1|LERPL38A L.esculentum rpl38 mRNA for ribosomal protein L38 Length = 384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 176 gtcaagttcaaggtgcgctgctccaggtacctctacaccctctg 219 ||||| |||||||| |||||||||| |||||||||||| ||||| Sbjct: 113 gtcaaattcaaggttcgctgctccaagtacctctacacactctg 156
>dbj|AB037665.1| Mus musculus rpl38 mRNA for ribosomal protein L38, complete cds Length = 380 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || ||||||||||| || ||| || ||||||| Sbjct: 136 gagatcaaggactttctgctgacagcccggcggaaggatgccaagtctgtcaagatcaag 195 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 196 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 251
>gb|BC124069.1| Danio rerio zgc:152655, mRNA (cDNA clone MGC:152655 IMAGE:5603862), complete cds Length = 966 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 245 aagctcaagcagtccctcccaccaggtttg 274 ||||||||||||||||| |||||||||||| Sbjct: 802 aagctcaagcagtccctgccaccaggtttg 831 Score = 40.1 bits (20), Expect = 7.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| || |||||||||||||||||| ||| ||||| ||||| Sbjct: 711 gatcaagaagaacaaggacaatgtgaagttcaaggtgcgctgcagcagatacctgtacac 770
>ref|XM_979595.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC625646), mRNA Length = 357 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaagga 138 ||||||||||||||| ||||||| || ||||||||||| Sbjct: 86 gagatcaaggactttctgctgacagcccggcggaagga 123
>ref|XM_914557.2| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC638514), mRNA Length = 356 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaagga 138 ||||||||||||||| ||||||| || ||||||||||| Sbjct: 86 gagatcaaggactttctgctgacagcccggcggaagga 123
>ref|XM_890220.2| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC625646), mRNA Length = 357 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaagga 138 ||||||||||||||| ||||||| || ||||||||||| Sbjct: 86 gagatcaaggactttctgctgacagcccggcggaagga 123
>ref|NM_001002486.1| Danio rerio zgc:92860 (zgc:92860), mRNA gb|BC076322.1| Danio rerio zgc:92860, mRNA (cDNA clone MGC:92860 IMAGE:7117238), complete cds Length = 383 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 245 aagctcaagcagtccctcccaccaggtttg 274 ||||||||||||||||| |||||||||||| Sbjct: 213 aagctcaagcagtccctgccaccaggtttg 242 Score = 40.1 bits (20), Expect = 7.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| || |||||||||||||||||| ||| ||||| ||||| Sbjct: 122 gatcaagaagaacaaggacaatgtgaagttcaaggtgcgctgcagcagatacctgtacac 181
>gb|AF420433.1|AF420433 Branchiostoma belcheri ribosomal protein L38 mRNA, complete cds Length = 356 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| || |||||||||||||| ||| | ||||||| ||||| Sbjct: 140 gatcaagaagaacaaggacaatgtgaagttcaaggtgcgttgcagccggtacctgtacac 199 Query: 214 cctctgcgtccacgacaccgacaaggccaacaagctcaagcagtccctcccaccaggt 271 ||| | || ||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 200 cctggtcatcaccgacaaggagaaggctgacaagctcaagcagtcccttccaccaggt 257
>emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chromosome 4, complete sequence Length = 248479 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaagga 138 ||||||||||||||| ||||||| || ||||||||||| Sbjct: 210337 gagatcaaggactttctgctgacagcccggcggaagga 210374
>emb|AL645484.14| Mouse DNA sequence from clone RP23-38A10 on chromosome 11, complete sequence Length = 161787 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaagga 138 ||||||||||||||| ||||||| || ||||||||||| Sbjct: 147875 gagatcaaggactttctgctgacagcccggcggaagga 147912 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| |||||| ||||||||| |||||||| Sbjct: 150720 aagttcaaggttcgctgcagcaggtacctttacaccct 150757
>gb|BT025016.1| Arabidopsis thaliana At2g43460 mRNA, complete cds Length = 210 Score = 50.1 bits (25), Expect = 0.008 Identities = 112/141 (79%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||| ||||| |||||||||||||||||||| | ||||| || | |||| || || Sbjct: 1 atgcctaagcaaatccacgagatcaaggacttccttctgacagctagaaggaaagatgca 60 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 || || ||| ||||||||| | |||||| |||||||| ||||| | ||||| ||| Sbjct: 61 cgatctgtgaagatcaagagaagcaaggatattgtcaagtttaaggtcagatgctcgagg 120 Query: 203 tacctctacaccctctgcgtc 223 ||||||||||| ||||||||| Sbjct: 121 tacctctacacgctctgcgtc 141
>ref|NM_129907.2| Arabidopsis thaliana structural constituent of ribosome (AT2G43460) mRNA, complete cds Length = 600 Score = 50.1 bits (25), Expect = 0.008 Identities = 112/141 (79%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||| ||||| |||||||||||||||||||| | ||||| || | |||| || || Sbjct: 110 atgcctaagcaaatccacgagatcaaggacttccttctgacagctagaaggaaagatgca 169 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 || || ||| ||||||||| | |||||| |||||||| ||||| | ||||| ||| Sbjct: 170 cgatctgtgaagatcaagagaagcaaggatattgtcaagtttaaggtcagatgctcgagg 229 Query: 203 tacctctacaccctctgcgtc 223 ||||||||||| ||||||||| Sbjct: 230 tacctctacacgctctgcgtc 250
>gb|AY088307.1| Arabidopsis thaliana clone 5460 mRNA, complete sequence Length = 571 Score = 50.1 bits (25), Expect = 0.008 Identities = 112/141 (79%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactttttgctgacggcgcggcggaaggacgcg 142 ||||| ||||| |||||||||||||||||||| | ||||| || | |||| || || Sbjct: 110 atgcctaagcaaatccacgagatcaaggacttccttctgacagctagaaggaaagatgca 169 Query: 143 cggtcggtgcggatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccagg 202 || || ||| ||||||||| | |||||| |||||||| ||||| | ||||| ||| Sbjct: 170 cgatctgtgaagatcaagagaagcaaggatattgtcaagtttaaggtcagatgctcgagg 229 Query: 203 tacctctacaccctctgcgtc 223 ||||||||||| ||||||||| Sbjct: 230 tacctctacacgctctgcgtc 250
>ref|XM_984690.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC671050), mRNA Length = 359 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || |||| |||||| || ||| || ||||||| Sbjct: 86 gagatcaaggactttctgctgacagcccggcagaaggatgccaagtctgtcaagatcaag 145 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 146 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 201
>ref|XM_976669.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC674727), mRNA Length = 361 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || |||| |||||| || ||| || ||||||| Sbjct: 87 gagatcaaggactttctgctgacagcccggcagaaggatgccaagtctgtcaagatcaag 146 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 147 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 202
>ref|XM_984165.1| PREDICTED: Mus musculus similar to ribosomal protein L38 (LOC666487), mRNA Length = 359 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || |||| |||||| || ||| || ||||||| Sbjct: 86 gagatcaaggactttctgctgacagcccggcagaaggatgccaagtctgtcaagatcaag 145 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 146 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 201
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Plus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || |||| |||||| || ||| || ||||||| Sbjct: 144845 gagatcaaggactttctgctgacagcccggcagaaggatgccaagtctgtcaagatcaag 144904 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 144905 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 144960
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 48.1 bits (24), Expect = 0.031 Identities = 93/116 (80%) Strand = Plus / Minus Query: 101 gagatcaaggactttttgctgacggcgcggcggaaggacgcgcggtcggtgcggatcaag 160 ||||||||||||||| ||||||| || |||| |||||| || ||| || ||||||| Sbjct: 141640 gagatcaaggactttctgctgacagcccggcagaaggatgccaagtctgtcaagatcaag 141581 Query: 161 aggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 | || |||||| || ||||||||||| |||||| ||||||||| |||||||| Sbjct: 141580 aagaacaaggataatgtgaagttcaaggttcgctgcagcaggtacctttacaccct 141525
>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete sequence Length = 102057 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 176 gtcaagttcaaggtgcgctgctccaggtacctctacaccctctgcgtc 223 |||||||| ||||| | ||||| |||||||||||||| ||||||||| Sbjct: 61741 gtcaagtttaaggtcagatgctcgaggtacctctacacgctctgcgtc 61694
>emb|CR704321.2|CNS0G6EL Tetraodon nigroviridis full-length cDNA Length = 308 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| ||| || ||||||||||||||| ||||||||| ||||| Sbjct: 124 gatcaagaagaacaaggacaacgtaaaattcaaggtgcgctgcagcaggtacctgtacac 183
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 177 tcaagttcaaggtgcgctgctccaggtacctctacaccctctgc 220 ||||||||||||| ||||||||| |||| | |||||||||||| Sbjct: 27115023 tcaagttcaaggtcggctgctccaagtacatgtacaccctctgc 27114980
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 177 tcaagttcaaggtgcgctgctccaggtacctctacaccctctgc 220 ||||||||||||| ||||||||| |||| | |||||||||||| Sbjct: 16056 tcaagttcaaggtcggctgctccaagtacatgtacaccctctgc 16013
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Minus Query: 177 tcaagttcaaggtgcgctgctccaggtacctctacaccctctgc 220 ||||||||||||| ||||||||| |||| | |||||||||||| Sbjct: 86110 tcaagttcaaggtcggctgctccaagtacatgtacaccctctgc 86067
>emb|BX821085.1|CNS0A9B9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 514 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 83 atgccgaagcagatccacgagatcaaggactt 114 ||||| ||||| |||||||||||||||||||| Sbjct: 23 atgcctaagcaaatccacgagatcaaggactt 54
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccct 216 |||||||||||| || ||||||| |||||| |||||||| Sbjct: 555961 caagttcaaggtccgatgctccaagtacctttacaccct 555923
>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence Length = 243671 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 gctcctcctcctcccctgctcct 23 ||||||||||||||||||||||| Sbjct: 77790 gctcctcctcctcccctgctcct 77812
>gb|AY829773.1| Lonomia obliqua ribosomal protein L38e mRNA, complete cds Length = 213 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacac 213 ||||| |||||||||||||| |||| ||||||||| Sbjct: 97 aagtttaaggtgcgctgctcaaggttcctctacac 131
>ref|XM_811428.1| Trypanosoma cruzi strain CL Brener ribosomal protein L38 (Tc00.1047053508119.144) partial mRNA Length = 249 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccctc 217 |||||||||||||||||| | | ||||||||||||||| Sbjct: 97 aagttcaaggtgcgctgcagccgctacctctacaccctc 135
>emb|BX927300.16| Zebrafish DNA sequence from clone DKEY-1F1 in linkage group 14, complete sequence Length = 101779 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 245 aagctcaagcagtccctcccaccaggt 271 ||||||||||||||||| ||||||||| Sbjct: 17963 aagctcaagcagtccctgccaccaggt 17937 Score = 40.1 bits (20), Expect = 7.5 Identities = 50/60 (83%) Strand = Plus / Minus Query: 154 gatcaagaggaccaaggacgccgtcaagttcaaggtgcgctgctccaggtacctctacac 213 |||||||| || ||||||| || |||||||||||||||||| ||| ||||| ||||| Sbjct: 18054 gatcaagaagaacaaggacaatgtgaagttcaaggtgcgctgcagcagatacctgtacac 17995
>ref|XM_572379.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH02050) partial mRNA Length = 489 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccct 216 |||||||||||| || ||||||| |||||| |||||||| Sbjct: 338 caagttcaaggtccgatgctccaagtacctttacaccct 376
>gb|AC137155.3| Mus musculus BAC clone RP23-66E11 from 12, complete sequence Length = 211064 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 gctcctcctcctcccctgctcct 23 ||||||||||||||||||||||| Sbjct: 166455 gctcctcctcctcccctgctcct 166477
>ref|XM_001235536.1| PREDICTED: Gallus gallus similar to telencephalin (LOC772392), partial mRNA Length = 612 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gctgacggcgcggcggaaggac 139 |||||||||||||||||||||| Sbjct: 200 gctgacggcgcggcggaaggac 221
>ref|XM_001214595.1| Aspergillus terreus NIH2624 60S ribosomal protein L38 (ATEG_05417) mRNA, complete cds Length = 240 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccgacaaggccaacaagctcaagcag 256 ||||||||||| |||||||||||||| Sbjct: 155 ccgacaaggccgacaagctcaagcag 180
>ref|XM_001055663.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC681502), mRNA Length = 321 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 146 aagttcaaggtccgctgtagcaggtacctctacaccct 183
>ref|XM_001060218.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC681221), mRNA Length = 321 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 146 aagttcaaggtccgctgtagcaggtacctctacaccct 183
>ref|XM_001059663.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC682065), mRNA Length = 327 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 142 aagttcaaggtccgctgtagcaggtacctctacaccct 179
>ref|XM_001071601.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC689671), mRNA Length = 327 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 142 aagttcaaggtccgctgtagcaggtacctctacaccct 179
>ref|XM_001081640.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC688248), mRNA Length = 296 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 139 aagttcaaggtccgctgtagcaggtacctctacaccct 176
>ref|XM_001072625.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38, transcript variant 2 (LOC686435), mRNA Length = 317 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 144 aagttcaaggtccgctgtagcaggtacctctacaccct 181
>ref|XM_001072590.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38, transcript variant 1 (LOC686435), mRNA Length = 311 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 138 aagttcaaggtccgctgtagcaggtacctctacaccct 175
>ref|XM_001070529.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38, transcript variant 2 (LOC690833), mRNA Length = 317 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 144 aagttcaaggtccgctgtagcaggtacctctacaccct 181
>ref|XM_001070489.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38, transcript variant 1 (LOC690833), mRNA Length = 311 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 138 aagttcaaggtccgctgtagcaggtacctctacaccct 175
>ref|XM_001065958.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (predicted) (RGD1561636_predicted), mRNA Length = 332 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 164 aagttcaaggtccgctgtagcaggtacctctacaccct 201
>ref|XM_578241.2| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (predicted) (RGD1561636_predicted), mRNA Length = 332 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 164 aagttcaaggtccgctgtagcaggtacctctacaccct 201
>ref|XM_001063134.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC682793), mRNA Length = 301 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 151 aagttcaaggtccgctgtagcaggtacctctacaccct 188
>ref|XM_001065954.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC685963), mRNA Length = 362 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 171 aagttcaaggtccgctgtagcaggtacctctacaccct 208
>ref|XM_001063901.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC682969), mRNA Length = 335 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 159 aagttcaaggtccgctgtagcaggtacctctacaccct 196
>ref|XM_001074532.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38 (LOC690468), mRNA Length = 335 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 159 aagttcaaggtccgctgtagcaggtacctctacaccct 196
>gb|DQ440010.1| Aedes aegypti clone AE-2101 60S ribosomal protein L38 mRNA, complete cds Length = 213 Score = 44.1 bits (22), Expect = 0.48 Identities = 73/90 (81%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccctctgcgtccacgacaccgacaa 237 |||||||||| | ||||||||| |||| || ||||| || |||||| |||| || || Sbjct: 96 caagttcaagatccgctgctcccggtatctgtacacgctggtcgtccaggacaaggagaa 155 Query: 238 ggccaacaagctcaagcagtccctcccacc 267 |||| | ||||| ||||||||||| ||||| Sbjct: 156 ggccgaaaagctgaagcagtccctgccacc 185
>gb|AC167696.2| Reniera sp. JGI-2005 clone JGIBAYC-5E8, complete sequence Length = 38144 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctcct 23 |||||||||||||||||||||| Sbjct: 23265 ctcctcctcctcccctgctcct 23286
>gb|AY433665.1| Aedes aegypti ASAP ID: 34281 cytosolic large ribosomal subunit L38 mRNA sequence Length = 493 Score = 44.1 bits (22), Expect = 0.48 Identities = 73/90 (81%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccctctgcgtccacgacaccgacaa 237 |||||||||| | ||||||||| |||| || ||||| || |||||| |||| || || Sbjct: 190 caagttcaagatccgctgctcccggtatctgtacacgctggtcgtccaggacaaggagaa 249 Query: 238 ggccaacaagctcaagcagtccctcccacc 267 |||| | ||||| ||||||||||| ||||| Sbjct: 250 ggccgaaaagctgaagcagtccctgccacc 279
>ref|XM_501393.1| Yarrowia lipolytica CLIB122, YALI0C03333g predicted mRNA Length = 1959 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 cgacaaggccaacaagctcaag 253 |||||||||||||||||||||| Sbjct: 1075 cgacaaggccaacaagctcaag 1096
>ref|NM_001077592.1| Rattus norvegicus 60S ribosomal protein L38 (Rpl38), mRNA gb|BC101933.1| Rattus norvegicus 60S ribosomal protein L38, mRNA (cDNA clone MGC:125176 IMAGE:7371608), complete cds Length = 330 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 148 aagttcaaggtccgctgtagcaggtacctctacaccct 185
>dbj|AB225987.1| Aspergillus oryzae cDNA, contig sequence: AoEST2843 Length = 700 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccgacaaggccaacaagctcaagcag 256 ||||||||||| |||||||||||||| Sbjct: 218 ccgacaaggccgacaagctcaagcag 243
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccgacaaggccaacaagctcaagcag 256 ||||||||||| |||||||||||||| Sbjct: 2047154 ccgacaaggccgacaagctcaagcag 2047129
>ref|XM_386092.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG05916.1) partial mRNA Length = 237 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 gacaccgacaaggccaacaagctcaagcag 256 ||||||||||||||| | |||||||||||| Sbjct: 151 gacaccgacaaggccgagaagctcaagcag 180
>ref|XM_746949.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g07840) partial mRNA Length = 399 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccgacaaggccaacaagctcaagcag 256 ||||||||||| |||||||||||||| Sbjct: 86 ccgacaaggccgacaagctcaagcag 61
>ref|XM_746948.1| Aspergillus fumigatus Af293 ribosomal L38e protein family (Afu4g07830) partial mRNA Length = 243 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccgacaaggccaacaagctcaagcag 256 ||||||||||| |||||||||||||| Sbjct: 155 ccgacaaggccgacaagctcaagcag 180
>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the gene for werners helicase interacting protein (WHIP) (RUVBL), the SERPINB1 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1, a putative novel gene and the 3' end of a putative novel gene, complete sequence Length = 168147 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctcct 23 |||||||||||||||||||||| Sbjct: 101928 ctcctcctcctcccctgctcct 101949
>emb|CR938628.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAA1YD16AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 461 Score = 44.1 bits (22), Expect = 0.48 Identities = 73/90 (81%) Strand = Plus / Plus Query: 178 caagttcaaggtgcgctgctccaggtacctctacaccctctgcgtccacgacaccgacaa 237 |||||||||| | ||||||||| |||| || ||||| || |||||| |||| || || Sbjct: 191 caagttcaagatccgctgctcccggtatctgtacacgctggtcgtccaggacaaggagaa 250 Query: 238 ggccaacaagctcaagcagtccctcccacc 267 |||| | ||||| ||||||||||| ||||| Sbjct: 251 ggccgaaaagctgaagcagtccctgccacc 280
>dbj|AK062815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-E06, full insert sequence Length = 482 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 gacaccgacaaggccaacaagctcaagcag 256 ||||||||||||||| | |||||||||||| Sbjct: 198 gacaccgacaaggccgagaagctcaagcag 227
>emb|X57007.1|RNRIPRL38 Rat mRNA for ribosomal protein L38 Length = 345 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| ||||| |||||||||||||||||| Sbjct: 153 aagttcaaggtccgctgtagcaggtacctctacaccct 190
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 cgacaaggccaacaagctcaag 253 |||||||||||||||||||||| Sbjct: 438385 cgacaaggccaacaagctcaag 438364
>gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, complete sequence Length = 217847 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 179 aagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||| |||||| ||||||||| |||||||| Sbjct: 197202 aagttcaaggttcgctgcagcaggtacctttacaccct 197165
>gb|AC153157.3| Ornithorhynchus anatinus BAC clone OABb-358D20 from chromosome unknown, complete sequence Length = 140241 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 73084 ctcctcctcctcccctgctcc 73064
>emb|CT828778.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN081M06, full insert sequence Length = 679 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 145 ctcctcctcctcccctgctcc 165
>dbj|AK241162.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065116A05, full insert sequence Length = 1697 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 1565 ctcctcctcctcccctgctcc 1545
>emb|CR938721.5| Platypus DNA sequence from clone CLM1-231M12, complete sequence Length = 171880 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 73176 ctcctcctcctcccctgctcc 73156
>gb|AY023449.1| Oryza sativa microsatellite MRG5774 containing (TCC)X8, closest to marker S2660, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 112 ctcctcctcctcccctgctcc 132
>gb|AY023234.1| Oryza sativa microsatellite MRG5559 containing (GGA)X8, closest to marker S2660, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 113 ctcctcctcctcccctgctcc 93
>ref|NM_001044089.1| Bombyx mori ribosomal protein L38 (Rpl38), mRNA gb|AY769310.1| Bombyx mori ribosomal protein L38 (RpL38) mRNA, complete cds Length = 312 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 176 gtcaagttcaaggtgcgctgctccaggtacctctacaccct 216 |||||||||||||| || ||||| |||| ||| |||||||| Sbjct: 156 gtcaagttcaaggttcgatgctcaaggttcctgtacaccct 196
>dbj|AK094320.1| Homo sapiens cDNA FLJ37001 fis, clone BRACE2008172 Length = 2410 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tcctcctcctcccctgctcct 23 ||||||||||||||||||||| Sbjct: 228 tcctcctcctcccctgctcct 248
>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence Length = 168834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tcctcctcctcccctgctcct 23 ||||||||||||||||||||| Sbjct: 133183 tcctcctcctcccctgctcct 133163
>gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, complete sequence Length = 195144 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tcctcctcctcccctgctcct 23 ||||||||||||||||||||| Sbjct: 173739 tcctcctcctcccctgctcct 173759
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 10506963 ctcctcctcctcccctgctcc 10506943
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 34012357 ctcctcctcctcccctgctcc 34012337
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 8835 ctcctcctcctcccctgctcc 8815
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 accaaggacgccgtcaagttc 184 ||||||||||||||||||||| Sbjct: 4163549 accaaggacgccgtcaagttc 4163569
>dbj|AP005678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_F08 Length = 133805 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 74568 ctcctcctcctcccctgctcc 74548
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 107342 ctcctcctcctcccctgctcc 107322
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctcc 22 ||||||||||||||||||||| Sbjct: 143800 ctcctcctcctcccctgctcc 143780
>ref|XM_001017923.1| Tetrahymena thermophila SB210 conserved hypothetical protein (TTHERM_00620980) mRNA, complete cds Length = 4227 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gacaaggccaacaagctcaa 252 |||||||||||||||||||| Sbjct: 3911 gacaaggccaacaagctcaa 3930
>gb|AC186441.3| Pan troglodytes BAC clone CH251-245L19 from chromosome 1, complete sequence Length = 169200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcaagcagtccctcccacc 267 |||||||||||||||||||| Sbjct: 137744 ctcaagcagtccctcccacc 137763
>ref|NW_001091929.1| Theileria annulata strain Ankara clone C9 Length = 2592520 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacacc 214 ||||||||||| | ||||| ||||||||||||||| Sbjct: 1969453 aagttcaaggtcagatgctcaaggtacctctacacc 1969488
>ref|NM_100587.2| Arabidopsis thaliana unknown protein (AT1G07135) mRNA, complete cds Length = 697 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 266 cctcctcctcccctgctcct 247
>gb|AC109200.13| Mus musculus chromosome 8, clone RP23-26G21, complete sequence Length = 162734 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgctcctt 24 |||||||||||||| ||||||||| Sbjct: 2922 gctcctcctcctcctctgctcctt 2899
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 28577 ctcctcctcctcccctgctc 28558
>ref|XM_502752.1| Yarrowia lipolytica CLIB122, YALI0D12606g predicted mRNA Length = 1272 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 accaaggacgccgtcaagttcaag 187 ||||||| |||||||||||||||| Sbjct: 346 accaaggccgccgtcaagttcaag 369
>gb|AC124806.11| Mus musculus chromosome 1, clone RP24-282F20, complete sequence Length = 153901 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 aggattctgtcttgttttca 435 |||||||||||||||||||| Sbjct: 119594 aggattctgtcttgttttca 119575
>gb|AC117639.7| Mus musculus chromosome 10, clone RP23-225H6, complete sequence Length = 217522 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctataaattgattttattgc 492 |||||||||||||||||||| Sbjct: 79102 ctataaattgattttattgc 79083
>gb|BT010627.1| Arabidopsis thaliana At1g07135 gene, complete cds Length = 468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 266 cctcctcctcccctgctcct 247
>gb|AC102933.6| Mus musculus chromosome 8, clone RP24-211I18, complete sequence Length = 172489 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgctcctt 24 |||||||||||||| ||||||||| Sbjct: 167375 gctcctcctcctcctctgctcctt 167352
>gb|AC116794.11| Mus musculus chromosome 5, clone RP24-312A3, complete sequence Length = 154612 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 33223 cctcctcctcccctgctcct 33242
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 acttgttgcagaatggagat 454 |||||||||||||||||||| Sbjct: 56975 acttgttgcagaatggagat 56956
>gb|AC157904.3| Mus musculus chromosome 18, clone RP23-379G12, complete sequence Length = 182922 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tcctcctcctcccctgctcc 22 |||||||||||||||||||| Sbjct: 112462 tcctcctcctcccctgctcc 112443
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 tcccttatatcctataaatt 481 |||||||||||||||||||| Sbjct: 2623188 tcccttatatcctataaatt 2623169
>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence Length = 161443 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgct 20 |||||||||||||||||||| Sbjct: 105854 gctcctcctcctcccctgct 105835
>gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, complete sequence Length = 161925 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgct 20 |||||||||||||||||||| Sbjct: 27557 gctcctcctcctcccctgct 27538
>gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, complete sequence Length = 168965 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 caagctcaagcagtccctcc 263 |||||||||||||||||||| Sbjct: 122602 caagctcaagcagtccctcc 122583
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 12929661 ctcctcctcctcccctgctc 12929642
>gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, complete sequence Length = 184543 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgct 20 |||||||||||||||||||| Sbjct: 155411 gctcctcctcctcccctgct 155392
>emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chromosome 17, complete sequence Length = 206278 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gctccaggtacctctacacc 214 |||||||||||||||||||| Sbjct: 10672 gctccaggtacctctacacc 10691
>emb|AL513444.1|NCB11N2 Neurospora crassa DNA linkage group V BAC contig B11N2 Length = 99360 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 177 tcaagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||||| |||||| | ||||||||||||||| Sbjct: 37485 tcaagttcaaggtccgctgccagaagtacctctacaccct 37524
>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence Length = 176873 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 caagctcaagcagtccctcc 263 |||||||||||||||||||| Sbjct: 172191 caagctcaagcagtccctcc 172210
>gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, complete sequence Length = 121014 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 caagctcaagcagtccctcc 263 |||||||||||||||||||| Sbjct: 15669 caagctcaagcagtccctcc 15650
>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel gene, the 5' end of the PLAC1 gene for placenta-specific 1, a ribosomal protein L21 (RPL21) pseudogene, a ribosomal protein S7 (RPS7) pseudogene and the 3' end of the LOC169090 gene, complete sequence Length = 209317 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tccacgagatcaaggacttt 115 |||||||||||||||||||| Sbjct: 108729 tccacgagatcaaggacttt 108748
>gb|AY062507.1| Arabidopsis thaliana Unknown protein (F10K1.16) mRNA, partial cds Length = 667 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 237 cctcctcctcccctgctcct 218
>emb|AL121748.7|HSA342D11 Human DNA sequence from clone RP11-342D11 on chromosome 10 Contains the 3' end of the NRP1 gene for neuropilin 1 and two novel genes, complete sequence Length = 178183 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcaagcagtccctcccacc 267 |||||||||||||||||||| Sbjct: 172621 ctcaagcagtccctcccacc 172640
>emb|AL035417.15|HS891H21 Human DNA sequence from clone RP5-891H21 on chromosome 1p32.2-34.2 Contains a pseudogene similar to part of novel protein DKFZP434H132, the DMAP1 gene for DNA methyltransferase 1 associated protein, a novel gene, the 3' end of the PRNPIP gene for prion protein interacting protein and a CpG island, complete sequence Length = 122948 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 47279 ctcctcctcctcccctgctc 47260
>gb|AC091491.3| Homo sapiens chromosome 3 clone RP11-15F1 map 3p, complete sequence Length = 152888 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 107974 ctcctcctcctcccctgctc 107993
>emb|Z54354.1|SPAC2G11 S.pombe chromosome I cosmid c2G11 Length = 36162 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 atatcctataaattgatttt 487 |||||||||||||||||||| Sbjct: 16134 atatcctataaattgatttt 16153
>emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 4/8 Length = 349535 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cacgagatcaaggacttttt 117 |||||||||||||||||||| Sbjct: 10965 cacgagatcaaggacttttt 10946
>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence Length = 184118 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 92150 ctcctcctcctcccctgctc 92131
>gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-2308L13, complete sequence Length = 102477 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 99320 ctcctcctcctcccctgctc 99339
>gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, complete sequence Length = 185419 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ctcctcctcccctgctcctt 24 |||||||||||||||||||| Sbjct: 115916 ctcctcctcccctgctcctt 115897
>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 51201 cctcctcctcccctgctcct 51182
>gb|AC034246.4|AC034246 Homo sapiens chromosome 5 clone RP11-160F8, complete sequence Length = 155025 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 145954 ctcctcctcctcccctgctc 145935
>gb|AC005043.2|AC005043 Homo sapiens BAC clone RP11-576N21 from 1, complete sequence Length = 163417 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 68009 ctcctcctcctcccctgctc 67990
>dbj|AK176832.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL25-38-O10 Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK176680.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL25-22-B11 Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK176655.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL25-19-E05 Length = 740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 299 cctcctcctcccctgctcct 280
>dbj|AK176389.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL24-10-A17 Length = 652 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK175795.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL22-38-G18 Length = 742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK175717.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL22-25-O10 Length = 739 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 298 cctcctcctcccctgctcct 279
>dbj|AK175470.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL21-90-I23 Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK175335.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL21-77-O04 Length = 742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK175276.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL21-71-D21 Length = 740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 299 cctcctcctcccctgctcct 280
>dbj|AK175146.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL21-56-O05 Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 301 cctcctcctcccctgctcct 282
>dbj|AK175137.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL21-55-G11 Length = 740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctcctcctcccctgctcct 23 |||||||||||||||||||| Sbjct: 299 cctcctcctcccctgctcct 280
>ref|XM_956269.1| Neurospora crassa OR74A hypothetical protein ( (AL513444) probable ribosomal protein L38 [Neurospora crassa OR74A] ) (NCU03635.1) partial mRNA Length = 243 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 177 tcaagttcaaggtgcgctgctccaggtacctctacaccct 216 ||||||||||||| |||||| | ||||||||||||||| Sbjct: 101 tcaagttcaaggtccgctgccagaagtacctctacaccct 140
>dbj|AK129682.1| Homo sapiens cDNA FLJ26171 fis, clone ADG03656 Length = 2645 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgct 20 |||||||||||||||||||| Sbjct: 2096 gctcctcctcctcccctgct 2077
>ref|XM_949338.1| Theileria annulata strain Ankara 60S ribosomal protein L38 (TA21360) partial mRNA Length = 240 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 179 aagttcaaggtgcgctgctccaggtacctctacacc 214 ||||||||||| | ||||| ||||||||||||||| Sbjct: 112 aagttcaaggtcagatgctcaaggtacctctacacc 147
>gb|AC008960.6|AC008960 Homo sapiens chromosome 5 clone CTD-2354D24, complete sequence Length = 74999 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcctcctcctcccctgctc 21 |||||||||||||||||||| Sbjct: 16995 ctcctcctcctcccctgctc 17014
>gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, complete sequence Length = 185768 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tcctcctcctcccctgctcc 22 |||||||||||||||||||| Sbjct: 63844 tcctcctcctcccctgctcc 63825
>gb|AE016832.1| Enterococcus faecalis V583 plasmid pTEF3, complete sequence Length = 17963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ttgttgcagaatggagatat 456 |||||||||||||||||||| Sbjct: 12910 ttgttgcagaatggagatat 12929
>gb|AF113969.1|AF113969 Thermococcus hydrothermalis pullulanase (apuA) gene, complete cds Length = 5200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cgacaaggccaacaagctca 251 |||||||||||||||||||| Sbjct: 1767 cgacaaggccaacaagctca 1786
>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete sequence Length = 158763 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 atggagatatcttactccct 466 |||||||||||||||||||| Sbjct: 126464 atggagatatcttactccct 126445
>gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, complete sequence Length = 178896 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gctcctcctcctcccctgctcctt 24 ||||||||||||||||| |||||| Sbjct: 52321 gctcctcctcctcccctcctcctt 52298
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 accaaggacgccgtcaagttcaag 187 ||||||| |||||||||||||||| Sbjct: 1574440 accaaggccgccgtcaagttcaag 1574463
>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence Length = 223399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 atggagatatcttactccct 466 |||||||||||||||||||| Sbjct: 171297 atggagatatcttactccct 171278 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 80,357,156 Number of extensions: 5030211 Number of successful extensions: 140757 Number of sequences better than 10.0: 208 Number of HSP's gapped: 140745 Number of HSP's successfully gapped: 257 Length of query: 512 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 490 Effective length of database: 18,508,616,841 Effective search space: 9069222252090 Effective search space used: 9069222252090 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)