| Clone Name | FLbaf45f11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102627:Os07g0598900 | 613 | e-175 | 2 | AK106521:Os07g0598900 | 404 | e-112 | 3 | Os02g0800000:Os02g0800000 | 218 | 1e-56 | 4 | AK065249:Os04g0599700 | 214 | 2e-55 | 5 | Os02g0323900:Os02g0323900 | 30 | 6.6 | 6 | AK102386:Os09g0398300 | 29 | 8.7 |
|---|
>AK102627:Os07g0598900 | Length = 364 Score = 613 bits (1580), Expect = e-175 Identities = 306/364 (84%), Positives = 328/364 (90%) Frame = +2 Query: 32 MEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSGQHGK 211 MEDDD+CPPLAVEL P++ TVITGYLGAGKSTLVNYILS QHGK Sbjct: 1 MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGK 60 Query: 212 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQTKE 391 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQ KE Sbjct: 61 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKE 120 Query: 392 RMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNSSSFP 571 RMDHILLETTGLADPAPLVSILWLDDQLESSI+LDSIITVIDAKNFR QIDEH SSSFP Sbjct: 121 RMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFP 180 Query: 572 EAFHQIAFADVVILNKIDLVKDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYG 751 EAFHQIAFADVVILNKIDLV+ LEDLERQIH+VN LVTVV+SVRCQVDLN IFD+QAYG Sbjct: 181 EAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYG 240 Query: 752 VKNSSQLQELLEYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDI 931 KNSSQLQELLEYSKS PPN RHDNSISTLCI EQDP++L+KVESWLEDLLWE+K +MDI Sbjct: 241 AKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDI 300 Query: 932 YRCKGILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFS 1111 YRCKGIL++HNS+Q+HTLQAVREVYEV+PAREWS+T+ R NKIV IGR+LDI+ LQDSFS Sbjct: 301 YRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFS 360 Query: 1112 RCKH 1123 RCKH Sbjct: 361 RCKH 364
>AK106521:Os07g0598900 | Length = 245 Score = 404 bits (1038), Expect = e-112 Identities = 206/242 (85%), Positives = 214/242 (88%) Frame = +2 Query: 32 MEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSGQHGK 211 MEDDD+CPPLAVEL P++ TVITGYLGAGKSTLVNYILS QHGK Sbjct: 1 MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGK 60 Query: 212 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQTKE 391 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQ KE Sbjct: 61 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKE 120 Query: 392 RMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNSSSFP 571 RMDHILLETTGLADPAPLVSILWLDDQLESSI+LDSIITVIDAKNFR QIDEH SSSFP Sbjct: 121 RMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFP 180 Query: 572 EAFHQIAFADVVILNKIDLVKDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYG 751 EAFHQIAFADVVILNKIDLV+ LEDLERQIH+VN LVTVV+SVRCQVDLN IFD+QAYG Sbjct: 181 EAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYG 240 Query: 752 VK 757 K Sbjct: 241 AK 242
>Os02g0800000:Os02g0800000 | Length = 447 Score = 218 bits (555), Expect = 1e-56 Identities = 124/359 (34%), Positives = 203/359 (56%), Gaps = 32/359 (8%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316 T+ITG+LG+GK+TL+N+IL+ HGKRIAVI NE+GE + ++ +++ GA E+ + L Sbjct: 93 TIITGFLGSGKTTLLNHILTAHHGKRIAVIENEYGE-VDIDGSLVAAQTAGA--EDIMML 149 Query: 317 ANGCVCCTVKHSLVQALEQLVQTKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIRL 493 NGC+CCTV+ LV+ + +LV K+ + DHI++ETTGLA+PAP++ + +D + + ++L Sbjct: 150 NNGCLCCTVRGDLVRMIGELVDKKKGKFDHIIIETTGLANPAPIIQTFYAEDTVFNDVKL 209 Query: 494 DSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLERQIHD 670 D ++T++DAK+ R +DE EA QIA+AD +I+NKIDLV + ++ L +I Sbjct: 210 DGVVTLVDAKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVSEPEVSSLVERIRS 269 Query: 671 VNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELLEYSKSAPPNSRHD--------- 823 +N + + R+ +VDL+ + + ++ + + +HD Sbjct: 270 MNRMAHLKRAEYGKVDLDYVLGIGGFDLERIESAVTEVSHDHHTGHEHKHDHEHHHHDHH 329 Query: 824 ---------------------NSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRC 940 +S+S +C E D L K + WL +LL E+ DIYR Sbjct: 330 HHDHEHKHDHHAHDHTHDPGVSSVSIVCEGEMD---LEKADMWLGNLLLERSD--DIYRM 384 Query: 941 KGILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFSRC 1117 KG+L++ Q Q V ++++ P R W +PR+NKIVFIG++L+ L+ F C Sbjct: 385 KGLLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGKNLNGEELEKGFKDC 443
>AK065249:Os04g0599700 | Length = 411 Score = 214 bits (544), Expect = 2e-55 Identities = 123/341 (36%), Positives = 204/341 (59%), Gaps = 14/341 (4%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316 TVITG+LG+GK+TL+N+IL+ QHGKRIAVI NEFGE + ++ +++ ++ E+ V + Sbjct: 74 TVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGE-VDIDSSLV--ASHSSVAEDIVMV 130 Query: 317 ANGCVCCTVKHSLVQALEQLVQTK-ERMDHILLETTGLADPAPLVSILWLDDQLESSIRL 493 NGC+CCTV+ LV+ L +LV+ K ++ DHI++ETTGLA P P++ D+ + ++L Sbjct: 131 NNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSRYVKL 190 Query: 494 DSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLERQIHD 670 D ++T++D K+ + ++E EA Q+A+AD +ILNK DLV + +LE L +I Sbjct: 191 DGVVTMVDCKHAMKHLNEVKARWVVNEAVEQVAYADRIILNKTDLVDNAELEVLINKIKL 250 Query: 671 VNELVTVVRSVRCQVDLNTIFDRQAYG---VKNSSQLQELL---------EYSKSAPPNS 814 +N + + ++ VD++ + Y +++ QL E E+ Sbjct: 251 INGMAQMRKTKFGDVDMDFVLGIGGYDLDRIESEVQLHERKETGHCHAGEEHGHQHHHGH 310 Query: 815 RHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRCKGILNIHNSNQLHTLQAV 994 HD+++S++ I + ++L +V WLE L+ EK D+YR KG+++++ S Q V Sbjct: 311 VHDSAVSSVSIVSEGVLDLDEVNDWLERLVEEK--GEDLYRLKGVISVNESTGRFVFQGV 368 Query: 995 REVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFSRC 1117 + E PA+ W + R NK+VFIGR+LD + L+ +F C Sbjct: 369 HSMLEGCPAKPWEPDEKRFNKLVFIGRNLDEAALRKAFKGC 409
>Os02g0323900:Os02g0323900 | Length = 1128 Score = 29.6 bits (65), Expect = 6.6 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +2 Query: 347 HSLVQALEQLVQTKERMDHILLETTGLADPAPLVSILWLD---DQLESSIRLDS---IIT 508 H LVQ + T +R L GL P P+ SI+W D D +E+ R+ I++ Sbjct: 813 HRLVQDFVKACATCQRYKSEHLHPAGLLQPLPVPSIVWADIGLDFVEALPRVHGKMIILS 872 Query: 509 VID 517 V+D Sbjct: 873 VVD 875
>AK102386:Os09g0398300 | Length = 222 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -1 Query: 315 SSTHSSTRAPPCPSLIIALSTPIS-SPNSFSITAILFPCCP 196 S+TH + P PSL L+T S + +S + T PCCP Sbjct: 48 STTHVTGSTPLLPSLATLLATSTSIARSSSATTGTASPCCP 88 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 48,017,383 Number of extensions: 1100957 Number of successful extensions: 3247 Number of sequences better than 10.0: 6 Number of HSP's gapped: 3236 Number of HSP's successfully gapped: 6 Length of query: 557 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 451 Effective length of database: 11,155,509 Effective search space: 5031134559 Effective search space used: 5031134559 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)