ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102627:Os07g0598900 613 e-175
2AK106521:Os07g0598900 404 e-112
3Os02g0800000:Os02g0800000 218 1e-56
4AK065249:Os04g0599700 214 2e-55
5Os02g0323900:Os02g0323900 30 6.6
6AK102386:Os09g0398300 29 8.7

>AK102627:Os07g0598900 |
          Length = 364
 Score =  613 bits (1580), Expect = e-175
 Identities = 306/364 (84%), Positives = 328/364 (90%)
 Frame = +2

Query: 32   MEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSGQHGK 211
            MEDDD+CPPLAVEL P++                 TVITGYLGAGKSTLVNYILS QHGK
Sbjct: 1    MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGK 60

Query: 212  RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQTKE 391
            RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQ KE
Sbjct: 61   RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKE 120

Query: 392  RMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNSSSFP 571
            RMDHILLETTGLADPAPLVSILWLDDQLESSI+LDSIITVIDAKNFR QIDEH  SSSFP
Sbjct: 121  RMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFP 180

Query: 572  EAFHQIAFADVVILNKIDLVKDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYG 751
            EAFHQIAFADVVILNKIDLV+  LEDLERQIH+VN LVTVV+SVRCQVDLN IFD+QAYG
Sbjct: 181  EAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYG 240

Query: 752  VKNSSQLQELLEYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDI 931
             KNSSQLQELLEYSKS PPN RHDNSISTLCI EQDP++L+KVESWLEDLLWE+K +MDI
Sbjct: 241  AKNSSQLQELLEYSKSVPPNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDI 300

Query: 932  YRCKGILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFS 1111
            YRCKGIL++HNS+Q+HTLQAVREVYEV+PAREWS+T+ R NKIV IGR+LDI+ LQDSFS
Sbjct: 301  YRCKGILHVHNSDQVHTLQAVREVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFS 360

Query: 1112 RCKH 1123
            RCKH
Sbjct: 361  RCKH 364



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>AK106521:Os07g0598900 |
          Length = 245

 Score =  404 bits (1038), Expect = e-112
 Identities = 206/242 (85%), Positives = 214/242 (88%)
 Frame = +2

Query: 32  MEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSGQHGK 211
           MEDDD+CPPLAVEL P++                 TVITGYLGAGKSTLVNYILS QHGK
Sbjct: 1   MEDDDECPPLAVELSPEKPYSPPPLGPSAASPVGVTVITGYLGAGKSTLVNYILSAQHGK 60

Query: 212 RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQTKE 391
           RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQ KE
Sbjct: 61  RIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKE 120

Query: 392 RMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNSSSFP 571
           RMDHILLETTGLADPAPLVSILWLDDQLESSI+LDSIITVIDAKNFR QIDEH  SSSFP
Sbjct: 121 RMDHILLETTGLADPAPLVSILWLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFP 180

Query: 572 EAFHQIAFADVVILNKIDLVKDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYG 751
           EAFHQIAFADVVILNKIDLV+  LEDLERQIH+VN LVTVV+SVRCQVDLN IFD+QAYG
Sbjct: 181 EAFHQIAFADVVILNKIDLVEGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYG 240

Query: 752 VK 757
            K
Sbjct: 241 AK 242



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>Os02g0800000:Os02g0800000 |
          Length = 447

 Score =  218 bits (555), Expect = 1e-56
 Identities = 124/359 (34%), Positives = 203/359 (56%), Gaps = 32/359 (8%)
 Frame = +2

Query: 137  TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316
            T+ITG+LG+GK+TL+N+IL+  HGKRIAVI NE+GE + ++ +++     GA  E+ + L
Sbjct: 93   TIITGFLGSGKTTLLNHILTAHHGKRIAVIENEYGE-VDIDGSLVAAQTAGA--EDIMML 149

Query: 317  ANGCVCCTVKHSLVQALEQLVQTKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIRL 493
             NGC+CCTV+  LV+ + +LV  K+ + DHI++ETTGLA+PAP++   + +D + + ++L
Sbjct: 150  NNGCLCCTVRGDLVRMIGELVDKKKGKFDHIIIETTGLANPAPIIQTFYAEDTVFNDVKL 209

Query: 494  DSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLERQIHD 670
            D ++T++DAK+ R  +DE        EA  QIA+AD +I+NKIDLV + ++  L  +I  
Sbjct: 210  DGVVTLVDAKHARLHLDEVKPKGIVNEAVQQIAYADRIIVNKIDLVSEPEVSSLVERIRS 269

Query: 671  VNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELLEYSKSAPPNSRHD--------- 823
            +N +  + R+   +VDL+ +     + ++        + +        +HD         
Sbjct: 270  MNRMAHLKRAEYGKVDLDYVLGIGGFDLERIESAVTEVSHDHHTGHEHKHDHEHHHHDHH 329

Query: 824  ---------------------NSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRC 940
                                 +S+S +C  E D   L K + WL +LL E+    DIYR 
Sbjct: 330  HHDHEHKHDHHAHDHTHDPGVSSVSIVCEGEMD---LEKADMWLGNLLLERSD--DIYRM 384

Query: 941  KGILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFSRC 1117
            KG+L++    Q    Q V ++++  P R W   +PR+NKIVFIG++L+   L+  F  C
Sbjct: 385  KGLLSVSGMPQRFVFQGVHDIFQGSPERMWEPNEPRINKIVFIGKNLNGEELEKGFKDC 443



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>AK065249:Os04g0599700 |
          Length = 411

 Score =  214 bits (544), Expect = 2e-55
 Identities = 123/341 (36%), Positives = 204/341 (59%), Gaps = 14/341 (4%)
 Frame = +2

Query: 137  TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316
            TVITG+LG+GK+TL+N+IL+ QHGKRIAVI NEFGE + ++ +++      ++ E+ V +
Sbjct: 74   TVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGE-VDIDSSLV--ASHSSVAEDIVMV 130

Query: 317  ANGCVCCTVKHSLVQALEQLVQTK-ERMDHILLETTGLADPAPLVSILWLDDQLESSIRL 493
             NGC+CCTV+  LV+ L +LV+ K ++ DHI++ETTGLA P P++     D+ +   ++L
Sbjct: 131  NNGCLCCTVRGDLVKMLLKLVKQKGDKFDHIVIETTGLAKPGPVIETFCSDELVSRYVKL 190

Query: 494  DSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKD-DLEDLERQIHD 670
            D ++T++D K+  + ++E        EA  Q+A+AD +ILNK DLV + +LE L  +I  
Sbjct: 191  DGVVTMVDCKHAMKHLNEVKARWVVNEAVEQVAYADRIILNKTDLVDNAELEVLINKIKL 250

Query: 671  VNELVTVVRSVRCQVDLNTIFDRQAYG---VKNSSQLQELL---------EYSKSAPPNS 814
            +N +  + ++    VD++ +     Y    +++  QL E           E+        
Sbjct: 251  INGMAQMRKTKFGDVDMDFVLGIGGYDLDRIESEVQLHERKETGHCHAGEEHGHQHHHGH 310

Query: 815  RHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRCKGILNIHNSNQLHTLQAV 994
             HD+++S++ I  +  ++L +V  WLE L+ EK    D+YR KG+++++ S      Q V
Sbjct: 311  VHDSAVSSVSIVSEGVLDLDEVNDWLERLVEEK--GEDLYRLKGVISVNESTGRFVFQGV 368

Query: 995  REVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQDSFSRC 1117
              + E  PA+ W   + R NK+VFIGR+LD + L+ +F  C
Sbjct: 369  HSMLEGCPAKPWEPDEKRFNKLVFIGRNLDEAALRKAFKGC 409



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>Os02g0323900:Os02g0323900 |
          Length = 1128

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = +2

Query: 347  HSLVQALEQLVQTKERMDHILLETTGLADPAPLVSILWLD---DQLESSIRLDS---IIT 508
            H LVQ   +   T +R     L   GL  P P+ SI+W D   D +E+  R+     I++
Sbjct: 813  HRLVQDFVKACATCQRYKSEHLHPAGLLQPLPVPSIVWADIGLDFVEALPRVHGKMIILS 872

Query: 509  VID 517
            V+D
Sbjct: 873  VVD 875



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>AK102386:Os09g0398300 |
          Length = 222

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 315 SSTHSSTRAPPCPSLIIALSTPIS-SPNSFSITAILFPCCP 196
           S+TH +   P  PSL   L+T  S + +S + T    PCCP
Sbjct: 48  STTHVTGSTPLLPSLATLLATSTSIARSSSATTGTASPCCP 88


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 48,017,383
Number of extensions: 1100957
Number of successful extensions: 3247
Number of sequences better than 10.0: 6
Number of HSP's gapped: 3236
Number of HSP's successfully gapped: 6
Length of query: 557
Length of database: 15,399,855
Length adjustment: 106
Effective length of query: 451
Effective length of database: 11,155,509
Effective search space: 5031134559
Effective search space used: 5031134559
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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