ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45f11 |
|---|---|
| Clone Library Name | barley_pub |
>Q8VEH6:CBWD1_MOUSE COBW domain-containing protein 1 - Mus musculus (Mouse)| Length = 393 Score = 252 bits (644), Expect = 3e-66 Identities = 146/371 (39%), Positives = 217/371 (58%), Gaps = 8/371 (2%) Frame = +2 Query: 20 LSAAMEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSG 199 + A E +DCP EL P T T++TGYLGAGK+TL+NYIL+ Sbjct: 8 VEAEEEYAEDCP----ELVPIETKNQEEENLDFITKIPVTIVTGYLGAGKTTLLNYILTE 63 Query: 200 QHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLV 379 QH ++IAVILNEFGE VE+++ QGG L EEW+EL NGC+CC+VK S ++A+E L+ Sbjct: 64 QHNRKIAVILNEFGEGSAVEKSLA-VSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLM 122 Query: 380 QTKERMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNS 559 Q K + D+ILLETTGLADP + S+ W+D +L S I LD IITV+D+K + + E Sbjct: 123 QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPD 182 Query: 560 SSFPEAFHQIAFADVVILNKIDLV-KDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFD 736 EA Q+A AD++++NK DLV +++L +L I +N L V+ + R +V L+ I D Sbjct: 183 GLVNEATRQVALADMILINKTDLVSEEELNNLRTTIRSINGLGKVLETQRSRVHLSNILD 242 Query: 737 RQAYGVKNSSQLQELLEYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKK 916 AY + + LQ+ L++ +AP D SI T+ + ++++LLWEK Sbjct: 243 LHAYDILSGISLQKKLQHVSTAP---HLDQSIVTVTFEVPGSAKEECLNVFIQNLLWEKN 299 Query: 917 SN------MDIYRCKGILNIHNSNQLHTLQAVREVYEVVPAR-EWSETQPRMNKIVFIGR 1075 M++ R KG+++I + Q +Q + E+Y++ + W + R ++VFIGR Sbjct: 300 VKNKDGHCMEVIRLKGLVSIKDKPQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGR 359 Query: 1076 DLDISTLQDSF 1108 +LD LQ F Sbjct: 360 NLDKDVLQQLF 370
>Q9BRT8:CBWD1_HUMAN COBW domain-containing protein 1 - Homo sapiens (Human)| Length = 395 Score = 251 bits (642), Expect = 5e-66 Identities = 145/373 (38%), Positives = 220/373 (58%), Gaps = 11/373 (2%) Frame = +2 Query: 23 SAAMEDD---DDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYIL 193 SA E+D +DCP L +P + T T+ITGYLGAGK+TL+NYIL Sbjct: 7 SADEEEDPAEEDCPEL---VPIETTQSEEEEKSGLGAKIPVTIITGYLGAGKTTLLNYIL 63 Query: 194 SGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQ 373 + QH KR+AVILNEFGE +E+++ QGG L EEW+EL NGC+CC+VK S ++A+E Sbjct: 64 TEQHSKRVAVILNEFGEGSALEKSLA-VSQGGELYEEWLELRNGCLCCSVKDSGLRAIEN 122 Query: 374 LVQTKERMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHT 553 L+Q K + D+ILLETTGLADP + S+ W+D +L S I LD IIT++D+K + + E Sbjct: 123 LMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEK 182 Query: 554 NSSSFPEAFHQIAFADVVILNKIDLV-KDDLEDLERQIHDVNELVTVVRSVRCQVDLNTI 730 EA Q+A AD +++NK DLV ++D++ L I +N L ++ + R +VDL+ + Sbjct: 183 PDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLSNV 242 Query: 731 FDRQAYGVKNSSQLQELLEYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWE 910 D A+ + LQ+ L++ P+ D SI T+ + ++++LLWE Sbjct: 243 LDLHAFDSLSGISLQKKLQHVPGTQPHL--DQSIVTITFEVPGNAKEEHLNMFIQNLLWE 300 Query: 911 K----KSN--MDIYRCKGILNIHNSNQLHTLQAVREVYEVVPAR-EWSETQPRMNKIVFI 1069 K K N M++ R KG+++I + +Q +Q V E+Y++ W + R N++V + Sbjct: 301 KNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLL 360 Query: 1070 GRDLDISTLQDSF 1108 GR+LD L+ F Sbjct: 361 GRNLDKDILKQLF 373
>Q99MB4:CBWD1_RAT COBW domain-containing protein 1 - Rattus norvegicus (Rat)| Length = 394 Score = 248 bits (633), Expect = 5e-65 Identities = 143/371 (38%), Positives = 215/371 (57%), Gaps = 8/371 (2%) Frame = +2 Query: 20 LSAAMEDDDDCPPLAVELPPQRTXXXXXXXXXXXXXXXXTVITGYLGAGKSTLVNYILSG 199 + A E +DCP L +P + T++TGYLGAGK+TL+NYIL+ Sbjct: 8 VEAEEEYAEDCPEL---VPIETKHQEKEENLDFIIKIPVTIVTGYLGAGKTTLLNYILTE 64 Query: 200 QHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVELANGCVCCTVKHSLVQALEQLV 379 QH ++IAVILNEFGE VE+++ QGG L EEW+EL NGC+CC+VK + ++A+E L+ Sbjct: 65 QHNRKIAVILNEFGEGSAVEKSLA-VSQGGELYEEWLELRNGCLCCSVKDNGLKAIENLM 123 Query: 380 QTKERMDHILLETTGLADPAPLVSILWLDDQLESSIRLDSIITVIDAKNFRRQIDEHTNS 559 Q K + D+ILLETTGLADP + S+ W+D +L S I LD IITV+D+K + + E Sbjct: 124 QKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPD 183 Query: 560 SSFPEAFHQIAFADVVILNKIDLV-KDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFD 736 EA Q+A AD++++NK DLV +++L L I +N L V+ + R + L+ I D Sbjct: 184 GLVNEATRQVALADMILINKTDLVSEEELNKLRTTIRSINGLGKVLETQRSRTHLSNILD 243 Query: 737 RQAYGVKNSSQLQELLEYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKK 916 AY + LQ+ L++ +AP D SI T+ + ++++LLWEK Sbjct: 244 LHAYDTLSGISLQKKLQHVSTAP---HLDQSIVTVTFDVPGSAEEESLNVFIQNLLWEKN 300 Query: 917 SN------MDIYRCKGILNIHNSNQLHTLQAVREVYEVVPAR-EWSETQPRMNKIVFIGR 1075 M++ R KG+++I + Q +Q + E+YE+ +R W + R ++VFIG+ Sbjct: 301 VKNKDGRCMEVIRLKGLVSIKDKPQQMIVQGIHELYELEESRVNWKDDAERACQLVFIGK 360 Query: 1076 DLDISTLQDSF 1108 +LD LQ F Sbjct: 361 NLDKDILQQLF 371
>P53729:YN8H_YEAST Uncharacterized protein YNR029C - Saccharomyces cerevisiae (Baker's| yeast) Length = 429 Score = 171 bits (432), Expect = 1e-41 Identities = 107/357 (29%), Positives = 197/357 (55%), Gaps = 35/357 (9%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316 ++ITGYLG+GKSTL+ I K+IAVILNEFG+ +E+AM + G +EW++L Sbjct: 74 SIITGYLGSGKSTLLEKIALKGADKKIAVILNEFGDSSEIEKAMTIKN-GSNSYQEWLDL 132 Query: 317 ANGCVCCTVKHSLVQALEQLVQTKE-RMDHILLETTGLADPAPLVSILWLDDQLESSIRL 493 NGC+CC++K+ V+A+E +V+ ++D+ILLET+G+ADPAP+ + W D+ L SS+ + Sbjct: 133 GNGCLCCSLKNIGVKAIEDMVERSPGKIDYILLETSGIADPAPIAKMFWQDEGLNSSVYI 192 Query: 494 DSIITVIDAKNFRR-----QIDEHTN------SSSFPEAFHQIAFADVVILNKIDLVK-- 634 D IITV+D ++ + ID H + + A Q+A AD +I+NK D ++ Sbjct: 193 DGIITVLDCEHILKCLDDISIDAHWHGDKVGLEGNLTIAHFQLAMADRIIMNKYDTIEHS 252 Query: 635 -DDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELLEYSKSAPPN 811 + ++ L+ ++ ++N + + + + + D AY +S ++ ++L+ + Sbjct: 253 PEMVKQLKERVREINSIAPMFFTKYSDTPIQNLLDIHAY---DSVRISDILD--SGSGNG 307 Query: 812 SRHDNSISTLC-----IHEQDPVNLAKVESWLEDLLWEKKSNM--------------DIY 934 + HD+ + T+ + ++ N ++ +L+ LLW+ M ++ Sbjct: 308 TIHDDRMGTIMLTFRPLKNEEEYNNKFIKQFLQPLLWKNFGAMTVLGGRRRDDGRDWEVQ 367 Query: 935 RCKGILNIHNSNQL-HTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLDISTLQD 1102 R KG++ I N + +Q VR+ Y+V P + + + KIV IG+ L+ ++++ Sbjct: 368 RTKGLILIEGENPIARVIQGVRDTYDVFPGK--YDGSNKECKIVLIGKYLEKESIEE 422
>P24203:YJIA_ECOLI Uncharacterized GTP-binding protein yjiA - Escherichia coli| Length = 318 Score = 139 bits (349), Expect = 5e-32 Identities = 99/333 (29%), Positives = 167/333 (50%), Gaps = 8/333 (2%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316 T++TG+LGAGK+TL+ +IL+ QHG +IAVI NEFG E+ V+ +I G + L Sbjct: 7 TLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFG-EVSVDDQLI-----GDRATQIKTL 60 Query: 317 ANGCVCCTVKHSLVQALEQLVQTKER----MDHILLETTGLADPAPLVSILWLDDQLESS 484 NGC+CC+ + L AL L+ ++ D +++E TG+ADP P++ + + L Sbjct: 61 TNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQR 120 Query: 485 IRLDSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKDDLEDLERQI 664 LD +I ++DA + Q+++ T + S Q+ +AD ++L K D V + E L ++ Sbjct: 121 YLLDGVIALVDAVHADEQMNQFTIAQS------QVGYADRILLTKTD-VAGEAEKLHERL 173 Query: 665 HDVNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELLEYSKSAPPN----SRHDNSI 832 +N V +DL +F+ + L E S P + N I Sbjct: 174 ARINARAPVYTVTHGDIDLGLLFNTNGF---------MLEENVVSTKPRFHFIADKQNDI 224 Query: 833 STLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRCKGILNIHNSNQLHTLQAVREVYEV 1012 S++ + PV++++V +E+LL E + R KG+L I Q V+ +Y Sbjct: 225 SSIVVELDYPVDISEVSRVMENLLLESADK--LLRYKGMLWIDGEPNRLLFQGVQRLYSA 282 Query: 1013 VPAREWSETQPRMNKIVFIGRDLDISTLQDSFS 1111 R W + +P + +VFIG L ++ +F+ Sbjct: 283 DWDRPWGDEKPH-STMVFIGIQLPEEEIRAAFA 314
>Q9HZQ2:COBW_PSEAE Protein cobW - Pseudomonas aeruginosa| Length = 375 Score = 132 bits (331), Expect = 6e-30 Identities = 111/347 (31%), Positives = 176/347 (50%), Gaps = 31/347 (8%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINEGQGGALVEEW--- 307 T++TG+LGAGK+TL+ ++L G+RIAVI+NEFGE +G++ ++ + G EE Sbjct: 35 TIVTGFLGAGKTTLLRHMLDNAEGRRIAVIVNEFGE-LGIDGEILKQCSIGCSEEEAQGR 93 Query: 308 -VELANGCVCCTVKHSLVQALEQLVQTKERMDHILLETTGLADPAPLV-SILWLDDQLES 481 ELANGC+CCTV+ + +LV + +D IL+ET+GLA P PLV + W ++ + Sbjct: 94 VFELANGCLCCTVQEEFFPVMRELVARRGDLDQILIETSGLALPKPLVQAFQW--PEIRN 151 Query: 482 SIRLDSIITVIDA---------------KNFRRQIDEHTNSSSFPEAFH-QIAFADVVIL 613 + +D++ITV+D+ RRQ + S E F Q+A AD+VIL Sbjct: 152 ACTVDAVITVVDSPAVAAGTFAAHPEQVDQQRRQDPNLDHESPLHELFEDQLASADLVIL 211 Query: 614 NKIDLVKDDLEDLERQIHDV-NEL---VTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQEL 781 NK D + D E L R ++ EL V +V + R ++ L + G+ ++L Sbjct: 212 NKADQL--DAEALARVRAEIAGELPAAVKIVEASRGELPLPVLL-----GLNAEAEL--- 261 Query: 782 LEYSKSAPPNSRHDNSISTLCIHEQDP-----VNLAKV-ESWLEDLLWEKKSNMDIYRCK 943 + P + H+ H+ D V+L +V E+ L + L E DI R K Sbjct: 262 --HIDGRPTHHDHEGHED----HDHDEFDSFHVDLPEVEEAALLEALGELVERHDILRIK 315 Query: 944 GILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIGRDLD 1084 G I +Q V + ++ R+W + R ++V IG++LD Sbjct: 316 GFAAIPGKPMRLLVQGVGKRFDRHFDRKWLADEARSTRLVVIGQELD 362
>P29937:COBW_PSEDE Protein cobW - Pseudomonas denitrificans| Length = 354 Score = 122 bits (307), Expect = 3e-27 Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 32/348 (9%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVERAMINE-GQGGALVEEWVE 313 TVITG+LGAGK+T++ +L GKRI +I+NEFG+ +GV+ ++ G ++ +E Sbjct: 14 TVITGFLGAGKTTMIRNLLQNADGKRIGLIINEFGD-LGVDGDVLKGCGAEACTEDDIIE 72 Query: 314 LANGCVCCTVKHSLVQALEQLVQTKERMDHILLETTGLADPAPLVSIL-WLDDQLESSIR 490 L NGC+CCTV + + +L++ + R DHI++ET+GLA P PL++ W D + S + Sbjct: 73 LTNGCICCTVADDFIPTMTKLLERENRPDHIIIETSGLALPQPLIAAFNWPD--IRSEVT 130 Query: 491 LDSIITVIDAKNFR--RQIDEHT-------------NSSSFPEAFH-QIAFADVVILNKI 622 +D ++TV+D+ R D+H + S E F Q+ AD+++LNK Sbjct: 131 VDGVVTVVDSAAVAAGRFADDHDKVDALRVEDDNLDHESPIEELFEDQLTAADLIVLNKT 190 Query: 623 DLVKDDLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELL------ 784 DL+ + +++VR +V T KN +L Sbjct: 191 DLID----------------ASGLKAVRDEVSSRTSRKPTMIEAKNGEVAAAILLGLGVG 234 Query: 785 EYSKSAPPNSRHDNSISTLCIHEQDPVNLAKVE-------SWLEDLLWEKKSNMDIYRCK 943 S A S H+ H+ D + VE + D L + D+ R K Sbjct: 235 TESDIANRKSHHEMEHEAGEEHDHDEFDSFVVELGSIADPAAFIDRLKGVIAEHDVLRLK 294 Query: 944 GILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRMNKIVFIG-RDLD 1084 G ++ +QAV + R W + R ++V IG D+D Sbjct: 295 GFADVPGKPMRLLIQAVGARIDQYYDRAWGAGEKRGTRLVVIGLHDMD 342
>P31521:P47K_PSECL 47 kDa protein - Pseudomonas chlororaphis (Pseudomonas aureofaciens)| Length = 419 Score = 109 bits (272), Expect = 4e-23 Identities = 87/376 (23%), Positives = 175/376 (46%), Gaps = 49/376 (13%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGE-----EIGVERAMINEGQGGALVE 301 TV++G+LGAGK+TL+N IL + G R+AVI+N+ E E ++ G+ + Sbjct: 13 TVLSGFLGAGKTTLLNAILRNRQGLRVAVIVNDMSEVNLDAESVQRDVSLHRGR-----D 67 Query: 302 EWVELANGCVCCTVKHSLVQALEQLVQTKERMDHILLETTGLADPAPLV-SILWLDDQ-- 472 E +E++NGC+CCT++ L++ + L + ++R D++L+E+TG+++P P+ + +LD + Sbjct: 68 ELIEMSNGCICCTLRADLLEQISDLAR-QQRFDYLLIESTGISEPMPVAETFAFLDTEGF 126 Query: 473 -LESSIRLDSIITVIDAKNF-----------RRQIDEHTNSSSFPE-AFHQIAFADVVIL 613 L RLD+++TV+D F R + HT++ + Q+ +A+V+++ Sbjct: 127 SLSELARLDTLVTVVDGSQFQALLESTDTVARADTEAHTSTRHLADLLIEQVEYANVILV 186 Query: 614 NKIDLVKD-DLEDLERQIHDVNELVTVVRSVRCQVDLNTIFDRQAYGVKNSSQLQELLEY 790 NK DL+ + + + + +N ++ V L+++ D + + + + + Sbjct: 187 NKRDLIDEPGYQAVHAILAGLNPSARIMPMAHGNVALSSLLDTHLFDLPSLAASPGWMRK 246 Query: 791 SKS--APPNSRHDNSISTLCIHEQDPVNLAKVESWLEDLLWEKKSNMDIYRCKG------ 946 ++ P + +++ E+ P + + L + L + N + R KG Sbjct: 247 MEATDTPASESDTYGVTSWVYRERAPFHPQR----LLEFLQKPWHNGRLLRSKGYFWLAS 302 Query: 947 ----ILNIHNSNQLHTLQAVREVYEVVPAREWSETQPRM---------------NKIVFI 1069 I + S + V + + +W + R+ ++VFI Sbjct: 303 RHLEIGLLAQSGKQFQWDYVGRWWNFIEPSQWPRDEYRLQGIMAKWDSVVGDCRQELVFI 362 Query: 1070 GRDLDISTLQDSFSRC 1117 G+ LD LQ C Sbjct: 363 GQGLDTRVLQRELDHC 378
>P33030:YEIR_ECOLI Uncharacterized protein yeiR - Escherichia coli| Length = 328 Score = 71.2 bits (173), Expect = 1e-11 Identities = 53/170 (31%), Positives = 96/170 (56%), Gaps = 1/170 (0%) Frame = +2 Query: 140 VITGYLGAGKSTLVNYILSGQH-GKRIAVILNEFGEEIGVERAMINEGQGGALVEEWVEL 316 +ITG+LG+GK+T + ++L+ + ++ AV++NEFG E+G++ A++ GAL++ E+ Sbjct: 6 LITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFG-EVGIDGALL--ADSGALLK---EI 59 Query: 317 ANGCVCCTVKHSLVQALEQLVQTKERMDHILLETTGLADPAPLVSILWLDDQLESSIRLD 496 GC+CC + L L++ + + D +L+E TGL P ++ +L E I L Sbjct: 60 PGGCMCCVNGLPMQVGLNTLLR-QGKPDRLLIEPTGLGHPKQILDLL-TAPVYEPWIDLR 117 Query: 497 SIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKDDLE 646 + + ++D R +DE S+S Q+A AD+++ NK D + E Sbjct: 118 ATLCILDP---RLLLDE--KSASNENFRDQLAAADIIVANKSDRTTPESE 162
>P22042:YTR2_SPIAU Hypothetical protein in trpE 3'region - Spirochaeta aurantia| Length = 60 Score = 47.4 bits (111), Expect = 2e-04 Identities = 20/36 (55%), Positives = 29/36 (80%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGE 244 TV+TG+LG+GK+TLVN +L + G R +++NEFGE Sbjct: 11 TVLTGFLGSGKTTLVNRLLKERPGTRFGLVVNEFGE 46
>Q9X1A7:COAE_THEMA Dephospho-CoA kinase - Thermotoga maritima| Length = 180 Score = 38.9 bits (89), Expect = 0.065 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%) Frame = +2 Query: 143 ITGYLGAGKSTLVNYILSGQHGKRIAVILNEFGEEIGVE-RAMINEGQGGALVEEW-VEL 316 +TG +G GKST+ IL ++G + V ++ G E+ E + + E GG+++E+ V Sbjct: 5 VTGKIGTGKSTVCE-ILKNKYGAHV-VNVDRIGHEVLEEVKEKLVELFGGSVLEDGKVNR 62 Query: 317 ANGCVCCTVKHSLVQALEQLVQ--TKERMDHILLETTGL-ADPAPLVSILWLDDQLESSI 487 ++ LE LV K+R+ I+ +T+GL A L+ + LD Sbjct: 63 KKLAGIVFESRENLKKLELLVHPLMKKRVQEIINKTSGLIVIEAALLKRMGLDQ------ 116 Query: 488 RLDSIITVIDAKNFRRQIDEHTNSSSFPEAFHQIAFADVVILNKIDLVKDD-LEDLERQI 664 D +ITV+ ++ T EA ++ F + ++ I + + LEDLE+++ Sbjct: 117 LCDHVITVVASR--------ETILKRNREADRRLKFQEDIVPQGIVVANNSTLEDLEKKV 168 Query: 665 HDVNELV 685 +V +LV Sbjct: 169 EEVMKLV 175
>P64692:Y109_MYCBO Uncharacterized protein Mb0109 - Mycobacterium bovis| Length = 398 Score = 35.0 bits (79), Expect = 0.94 Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 16/151 (10%) Frame = +2 Query: 209 KRIAVILNEFGEEIGVERAMINEGQGGALV--EEWVELANGCVCCTVKHSLVQALEQLVQ 382 +R ++ E + V R M G L+ E+ +E A+GCV CT++ L+ L +L Sbjct: 23 RRTGTVVVEHRFDGHVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRL-H 81 Query: 383 TKERMDHILLETTGLADPAPL----------VSILWLDDQLESSIRLDSIITVIDAKNFR 532 ++ + I++ +P P+ V + D +R+ +++T +D + Sbjct: 82 RRDNVGRIVVHLAPWLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWL 141 Query: 533 RQI---DEHTNSSSFPE-AFHQIAFADVVIL 613 Q DE + + + Q FAD+++L Sbjct: 142 PQSLGEDELPDGRTVAQVTVGQAEFADLLVL 172
>P64691:Y106_MYCTU Uncharacterized protein Rv0106/MT0115 - Mycobacterium tuberculosis| Length = 398 Score = 35.0 bits (79), Expect = 0.94 Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 16/151 (10%) Frame = +2 Query: 209 KRIAVILNEFGEEIGVERAMINEGQGGALV--EEWVELANGCVCCTVKHSLVQALEQLVQ 382 +R ++ E + V R M G L+ E+ +E A+GCV CT++ L+ L +L Sbjct: 23 RRTGTVVVEHRFDGHVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRL-H 81 Query: 383 TKERMDHILLETTGLADPAPL----------VSILWLDDQLESSIRLDSIITVIDAKNFR 532 ++ + I++ +P P+ V + D +R+ +++T +D + Sbjct: 82 RRDNVGRIVVHLAPWLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWL 141 Query: 533 RQI---DEHTNSSSFPE-AFHQIAFADVVIL 613 Q DE + + + Q FAD+++L Sbjct: 142 PQSLGEDELPDGRTVAQVTVGQAEFADLLVL 172
>Q97R60:COAE_STRPN Dephospho-CoA kinase - Streptococcus pneumoniae| Length = 201 Score = 35.0 bits (79), Expect = 0.94 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 22/105 (20%) Frame = +2 Query: 143 ITGYLGAGKSTLVNYI----------------LSGQHGKRIAVILNEFGEEIGVERAMIN 274 ITG + +GKST+ N++ L G+ ++ FG+EI +E +N Sbjct: 7 ITGGIASGKSTVTNFLRQQGFQVVDADAVVHQLQKPGGRLFEALVQHFGQEIILENGELN 66 Query: 275 EGQGGALV------EEWVELANGCVCCTVKHSLVQALEQLVQTKE 391 +L+ EW + G + ++ L EQL QT+E Sbjct: 67 RPLLASLIFSNPDEREWSKQIQGEI---IREELATLREQLAQTEE 108
>Q8DQ32:COAE_STRR6 Dephospho-CoA kinase - Streptococcus pneumoniae (strain ATCC| BAA-255 / R6) Length = 201 Score = 33.9 bits (76), Expect = 2.1 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 22/105 (20%) Frame = +2 Query: 143 ITGYLGAGKSTLVNYI----------------LSGQHGKRIAVILNEFGEEIGVERAMIN 274 ITG + +GKST+ N++ L G+ ++ FG+EI +E +N Sbjct: 7 ITGGIASGKSTVTNFLRQQGFQAVDADAVVHQLQKPGGRLFEALVQHFGQEIILENGELN 66 Query: 275 EGQGGALV------EEWVELANGCVCCTVKHSLVQALEQLVQTKE 391 +L+ ++W G + ++ L EQL QT+E Sbjct: 67 RPLLASLIFSNPEEQKWSNQIQGEI---IREELATLREQLAQTEE 108
>Q8X6V7:GSIC_ECO57 Glutathione transport system permease protein gsiC - Escherichia coli| O157:H7 Length = 306 Score = 33.5 bits (75), Expect = 2.7 Identities = 21/84 (25%), Positives = 34/84 (40%) Frame = +2 Query: 1328 SYVPREQLPDTLERHFAEHLYMFSIATATVFVFGFAEGKCIKP*EDVT*IWRRKWKMPLK 1507 S V R + D + R F L++ + +FG A G + +WR +W L Sbjct: 80 SMVSRRPVADEIARRFMPTLWLTITSMVWAVIFGMAAGI-------IAAVWRNRWPDRLS 132 Query: 1508 LFGSFLGAQLAPFPYGRVLVLVIS 1579 + + G F G +L+ V S Sbjct: 133 MTIAVSGISFPAFALGMLLIQVFS 156
>Q8P5H9:ENGC_XANCP Probable GTPase engC - Xanthomonas campestris pv. campestris| Length = 363 Score = 33.1 bits (74), Expect = 3.6 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 140 VITGYLGAGKSTLVNYILSGQHGKRIAVILNEF-GEEIGVERAMINEGQGGALVE 301 V+ G GAGKSTL N +L Q K AV N+ G RA+I G L++ Sbjct: 207 VLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTTHRALIPLPSGACLID 261
>Q8PGW9:ENGC_XANAC Probable GTPase engC - Xanthomonas axonopodis pv. citri| Length = 363 Score = 33.1 bits (74), Expect = 3.6 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 140 VITGYLGAGKSTLVNYILSGQHGKRIAVILNEF-GEEIGVERAMINEGQGGALVE 301 V+ G GAGKSTL N +L Q K AV N+ G RA+I G L++ Sbjct: 207 VLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTTHRALIPLPSGACLID 261
>P41508:P115_MYCHR Protein P115 - Mycoplasma hyorhinis| Length = 979 Score = 32.7 bits (73), Expect = 4.7 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = +2 Query: 524 NFRRQIDEHTNSSSFPE-AFHQIAFADVVILNKIDLVKDDLEDLERQIHDVNELVTVVRS 700 N+ +I EHTN+ F E H + I N+I+ V ++ ++ + + +N + ++ Sbjct: 574 NYDIKIKEHTNTLKFAEDQIHDLKIKQQTIYNEIETVNSTIQQVKIEANSINSKLNILNE 633 Query: 701 VRCQVDLNT--IFDRQ 742 + LN IF Q Sbjct: 634 ELNNLKLNASEIFKEQ 649
>Q3ALX6:KGUA_SYNSC Guanylate kinase - Synechococcus sp. (strain CC9605)| Length = 185 Score = 32.3 bits (72), Expect = 6.1 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Frame = +2 Query: 137 TVITGYLGAGKSTLVNYILSGQHGKRIAVILN----EFGEEIGVERAMINEGQGGALVE- 301 T+ITG G GK TLVN +L ++V GE+ G+ + ALVE Sbjct: 8 TLITGPSGVGKGTLVNQLLERHPQIWLSVSATTRSPRQGEQDGINYFFHSRAGFEALVEQ 67 Query: 302 ----EWVELANGC 328 EW E A C Sbjct: 68 GGFLEWAEFAGNC 80
>Q4V8E5:MFSD3_RAT Major facilitator superfamily domain-containing protein 3 - Rattus| norvegicus (Rat) Length = 416 Score = 32.3 bits (72), Expect = 6.1 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +1 Query: 1525 GGAASSLSLWKGFGSSDIQTDGCMQTGAYW-RYCFHNSLPLVLL 1653 G +AS L LW G G++ G GA R+C H PL LL Sbjct: 244 GASASDLGLWSGLGAATCSIAGSSLGGALLARHCSHPRQPLKLL 287 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 291,195,265 Number of extensions: 6459467 Number of successful extensions: 20425 Number of sequences better than 10.0: 21 Number of HSP's gapped: 20382 Number of HSP's successfully gapped: 21 Length of query: 557 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 439 Effective length of database: 68,319,629 Effective search space: 29992317131 Effective search space used: 29992317131 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
