| Clone Name | FLbaf45f11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099K03, full insert sequence Length = 1537 Score = 985 bits (497), Expect = 0.0 Identities = 878/1005 (87%) Strand = Plus / Plus Query: 123 cgccggtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacgttagtca 182 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 149 cgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacgttagtca 208 Query: 183 actacattttgagtggacagcatgggaagagaatagcagtaatactgaacgagttcggag 242 |||||||| | |||| || ||||| |||||||| ||||| ||| |||| ||||| |||| Sbjct: 209 actacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggag 268 Query: 243 aggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgcccttgttgagg 302 |||||||||| || ||||||||||||||||| |||||||||||||| || |||||||| | Sbjct: 269 aggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaag 328 Query: 303 agtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcctggttcaag 362 ||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 329 agtgggtggagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaag 388 Query: 363 cactcgagcaacttgtgcagactaaggagagaatggatcatattttattggagacaactg 422 |||| ||||| |||||||||| ||||||||||||||||| || ||| | |||||||| | Sbjct: 389 cacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacag 448 Query: 423 gtttggctgatcctgcaccacttgtctccattctctggctggacgatcaattggagtcat 482 | ||||||||||||||||| |||||||| ||||| ||||| ||||| || |||||||||| Sbjct: 449 gattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcat 508 Query: 483 caatcagactagactctatcattacggttattgatgcaaaaaacttcaggcggcaaattg 542 |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 509 caattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattg 568 Query: 543 atgaacacacaaactcttcctcgttccctgaagcatttcaccaaatcgcattcgcggatg 602 |||| |||| || || || || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 569 atgagcacaataagtcatcatcattccctgaagcatttcatcaaattgcatttgcggatg 628 Query: 603 ttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaaggcaaa 662 |||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| | Sbjct: 629 ttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcaga 688 Query: 663 ttcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttgacttaa 722 ||||||| ||||| | |||||||||||||||| |||||| || |||||||||||||||| Sbjct: 689 ttcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaa 748 Query: 723 atacaatatttgatcgacaggcatatggtgtgaagaattcatcgcaactacaggagcttc 782 ||| ||||||||||| || |||||||||| |||||||||||||| || || || |||| Sbjct: 749 ataaaatatttgatcagcaagcatatggtgccaagaattcatcgcagctgcaagaacttc 808 Query: 783 tggagtacagtaaatcagcaccacctaatagtcgtcatgataacagtatttccacgttgt 842 |||||||||||||||||| |||||||||| |||||||||||||||||||| || |||| Sbjct: 809 tggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgt 868 Query: 843 gcattcatgaacaggatccagttaacttggctaaggtggaatcatggcttgaagatcttc 902 | ||| ||| ||||||||| || | || ||||||||||||||||||| || ||||||| Sbjct: 869 gtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttc 928 Query: 903 tttgggagaagaagtccaacatggatatatatcgttgcaaagggattttaaatatccata 962 ||||||| | ||||| |||||||||| |||||||| |||||||||||| || |||||| Sbjct: 929 tttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccata 988 Query: 963 attcgaaccaacttcatacattacaggcagtaagggaagtctatgaggttgtgccggctc 1022 | ||| | ||| ||||||||||||||||||| |||||||| ||||| ||| |||| |||| Sbjct: 989 actcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctc 1048 Query: 1023 gagaatggtctgagacacaacctcgcatgaacaagatagttttcataggccgtgatttgg 1082 |||||||||| ||||| || |||||| |||||||||||| ||||||| || | |||| Sbjct: 1049 gagaatggtccaagacagaatctcgcacaaacaagatagttgtcataggtcgcaacttgg 1108 Query: 1083 atatcagtacccttcaagattcatttagtcgctgcaagcactgat 1127 |||||| || ||||||||||||||||||||| ||||||||||||| Sbjct: 1109 atatcaatatccttcaagattcatttagtcgttgcaagcactgat 1153 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccgtcgagctc 73 ||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 50 cggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctc 99
>ref|NM_001066720.1| Oryza sativa (japonica cultivar-group) Os07g0598900 (Os07g0598900) mRNA, complete cds Length = 1536 Score = 977 bits (493), Expect = 0.0 Identities = 877/1005 (87%) Strand = Plus / Plus Query: 123 cgccggtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacgttagtca 182 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 148 cgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacgttagtca 207 Query: 183 actacattttgagtggacagcatgggaagagaatagcagtaatactgaacgagttcggag 242 |||||||| | |||| || ||||| |||||||| ||||| ||| |||| ||||| |||| Sbjct: 208 actacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggag 267 Query: 243 aggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgcccttgttgagg 302 |||||||||| || ||||||||||||||||| |||||||||||||| || |||||||| | Sbjct: 268 aggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaag 327 Query: 303 agtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcctggttcaag 362 ||||||| ||||| ||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 328 agtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaag 387 Query: 363 cactcgagcaacttgtgcagactaaggagagaatggatcatattttattggagacaactg 422 |||| ||||| |||||||||| ||||||||||||||||| || ||| | |||||||| | Sbjct: 388 cacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacag 447 Query: 423 gtttggctgatcctgcaccacttgtctccattctctggctggacgatcaattggagtcat 482 | ||||||||||||||||| |||||||| ||||| ||||| ||||| || |||||||||| Sbjct: 448 gattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcat 507 Query: 483 caatcagactagactctatcattacggttattgatgcaaaaaacttcaggcggcaaattg 542 |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 508 caattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattg 567 Query: 543 atgaacacacaaactcttcctcgttccctgaagcatttcaccaaatcgcattcgcggatg 602 |||| |||| || || || || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 568 atgagcacaataagtcatcatcattccctgaagcatttcatcaaattgcatttgcggatg 627 Query: 603 ttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaaggcaaa 662 |||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| | Sbjct: 628 ttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcaga 687 Query: 663 ttcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttgacttaa 722 ||||||| ||||| | |||||||||||||||| |||||| || |||||||||||||||| Sbjct: 688 ttcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaa 747 Query: 723 atacaatatttgatcgacaggcatatggtgtgaagaattcatcgcaactacaggagcttc 782 ||| ||||||||||| || |||||||||| |||||||||||||| || || || |||| Sbjct: 748 ataaaatatttgatcagcaagcatatggtgccaagaattcatcgcagctgcaagaacttc 807 Query: 783 tggagtacagtaaatcagcaccacctaatagtcgtcatgataacagtatttccacgttgt 842 |||||||||||||||||| |||||||||| |||||||||||||||||||| || |||| Sbjct: 808 tggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgt 867 Query: 843 gcattcatgaacaggatccagttaacttggctaaggtggaatcatggcttgaagatcttc 902 | ||| ||| ||||||||| || | || ||||||||||||||||||| || ||||||| Sbjct: 868 gtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttc 927 Query: 903 tttgggagaagaagtccaacatggatatatatcgttgcaaagggattttaaatatccata 962 ||||||| | ||||| |||||||||| |||||||| |||||||||||| || |||||| Sbjct: 928 tttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccata 987 Query: 963 attcgaaccaacttcatacattacaggcagtaagggaagtctatgaggttgtgccggctc 1022 | ||| | ||| ||||||||||||||||||| |||||||| ||||| ||| |||| |||| Sbjct: 988 actcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctc 1047 Query: 1023 gagaatggtctgagacacaacctcgcatgaacaagatagttttcataggccgtgatttgg 1082 |||||||||| ||||| || |||||| |||||||||||| ||||||| || | |||| Sbjct: 1048 gagaatggtccaagacagaatctcgcacaaacaagatagttgtcataggtcgcaacttgg 1107 Query: 1083 atatcagtacccttcaagattcatttagtcgctgcaagcactgat 1127 |||||| || ||||||||||||||||||||| ||||||||||||| Sbjct: 1108 atatcaatatccttcaagattcatttagtcgttgcaagcactgat 1152 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccgtcgagctc 73 ||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 49 cggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctc 98
>dbj|AK106521.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C11, full insert sequence Length = 2715 Score = 670 bits (338), Expect = 0.0 Identities = 557/630 (88%) Strand = Plus / Plus Query: 123 cgccggtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacgttagtca 182 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 148 cgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacgttagtca 207 Query: 183 actacattttgagtggacagcatgggaagagaatagcagtaatactgaacgagttcggag 242 |||||||| | |||| || ||||| |||||||| ||||| ||| |||| ||||| |||| Sbjct: 208 actacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggag 267 Query: 243 aggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgcccttgttgagg 302 |||||||||| || ||||||||||||||||| |||||||||||||| || |||||||| | Sbjct: 268 aggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaag 327 Query: 303 agtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcctggttcaag 362 ||||||| ||||| ||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct: 328 agtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaag 387 Query: 363 cactcgagcaacttgtgcagactaaggagagaatggatcatattttattggagacaactg 422 |||| ||||| |||||||||| ||||||||||||||||| || ||| | |||||||| | Sbjct: 388 cacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacag 447 Query: 423 gtttggctgatcctgcaccacttgtctccattctctggctggacgatcaattggagtcat 482 | ||||||||||||||||| |||||||| ||||| ||||| ||||| || |||||||||| Sbjct: 448 gattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcat 507 Query: 483 caatcagactagactctatcattacggttattgatgcaaaaaacttcaggcggcaaattg 542 |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 508 caattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattg 567 Query: 543 atgaacacacaaactcttcctcgttccctgaagcatttcaccaaatcgcattcgcggatg 602 |||| |||| || || || || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 568 atgagcacaataagtcatcatcattccctgaagcatttcatcaaattgcatttgcggatg 627 Query: 603 ttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaaggcaaa 662 |||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| | Sbjct: 628 ttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcaga 687 Query: 663 ttcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttgacttaa 722 ||||||| ||||| | |||||||||||||||| |||||| || |||||||||||||||| Sbjct: 688 ttcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaa 747 Query: 723 atacaatatttgatcgacaggcatatggtg 752 ||| ||||||||||| || |||||||||| Sbjct: 748 ataaaatatttgatcagcaagcatatggtg 777 Score = 131 bits (66), Expect = 9e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 986 caggcagtaagggaagtctatgaggttgtgccggctcgagaatggtctgagacacaacct 1045 |||||||| |||||||| ||||| ||| |||| |||||||||||||| ||||| || || Sbjct: 2134 caggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatct 2193 Query: 1046 cgcatgaacaagatagttttcataggccgtgatttggatatcagtacccttcaagattca 1105 |||| |||||||||||| ||||||| || | |||||||||| || ||||||||||||| Sbjct: 2194 cgcacaaacaagatagttgtcataggtcgcaacttggatatcaatatccttcaagattca 2253 Query: 1106 tttagtcgctgcaagcactgat 1127 |||||||| ||||||||||||| Sbjct: 2254 tttagtcgttgcaagcactgat 2275 Score = 109 bits (55), Expect = 3e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 875 aaggtggaatcatggcttgaagatcttctttgggagaagaagtccaacatggatatatat 934 ||||||||||||||||| || |||||||||||||| | ||||| |||||||||| ||| Sbjct: 1937 aaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttat 1996 Query: 935 cgttgcaaagggattttaaatatccataattcgaaccaacttcatacattacagg 989 ||||| |||||||||||| || ||||||| ||| | ||| ||||||||||||||| Sbjct: 1997 cgttgtaaagggattttacatgtccataactcggatcaagttcatacattacagg 2051 Score = 101 bits (51), Expect = 8e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 756 agaattcatcgcaactacaggagcttctggagtacagtaaatcagcaccacctaatagtc 815 ||||||||||||| || || || |||||||||||||||||||||| |||||||||| | Sbjct: 1227 agaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctcc 1286 Query: 816 gtcatgataacagtatttccacgttgtgcattcatgaacaggatcca 862 ||||||||||||||||||| || ||||| ||| ||| ||||||||| Sbjct: 1287 gtcatgataacagtatttctaccttgtgtatttgtgagcaggatcca 1333 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccgtcgagctc 73 ||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 49 cggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctc 98
>gb|AY110439.1| Zea mays CL194_1 mRNA sequence Length = 1580 Score = 434 bits (219), Expect = e-118 Identities = 560/679 (82%) Strand = Plus / Plus Query: 131 ggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacgttagtcaactacatt 190 ||||||||||||||||||||||||||||| || |||||||| ||| |||||||||||||| Sbjct: 158 ggcgtcaccgtcatcaccggctacctcggggctggcaagtcgacgctagtcaactacatt 217 Query: 191 ttgagtggacagcatgggaagagaatagcagtaatactgaacgagttcggagaggaaatt 250 ||| || || |||||||||||||| || || ||||| || ||||| |||||||||||| Sbjct: 218 ctgaatgagcaacatgggaagagaattgccgtgatactaaatgagtttggagaggaaatt 277 Query: 251 ggagtagaaagagcaatgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtg 310 || || ||||| || |||||||| ||||||||||||||||| ||| | ||||| |||||| Sbjct: 278 ggggtcgaaagggcgatgatcaatgaggggcaaggtggtgcacttatcgaggaatgggtg 337 Query: 311 gagctagcaaatggatgcgtttgttgcactgtaaaacacagcctggttcaagcactcgag 370 ||||| || |||||||| || |||||| ||||||||||||| |||||||||||||| ||| Sbjct: 338 gagctggccaatggatgtgtctgttgctctgtaaaacacagtctggttcaagcacttgag 397 Query: 371 caacttgtgcagactaaggagagaatggatcatattttattggagacaactggtttggct 430 || |||||||||| ||||| |||||||||||||| ||| | |||||||| || ||||| Sbjct: 398 cagcttgtgcagagaaaggatagaatggatcatatattacttgagacaacagggttggcc 457 Query: 431 gatcctgcaccacttgtctccattctctggctggacgatcaattggagtcatcaatcaga 490 |||||||| |||||||| || |||| ||||| ||||||||||||||||| ||||| Sbjct: 458 gatcctgctccacttgtttctgttctttggctagacgatcaattggagtcgtcaattgtg 517 Query: 491 ctagactctatcattacggttattgatgcaaaaaacttcaggcggcaaattgatgaacac 550 || || ||||| ||||||||||||||||| ||||||| || ||||| || ||| Sbjct: 518 ctggattctattattacggttattgatgcnnnnnncttcagggttcagattgacgagcac 577 Query: 551 acaaactcttcctcgttccctgaagcatttcaccaaatcgcattcgcggatgttgtgata 610 ||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 578 nnnnnctcttcctcattccctgaagcatttcatcaaattgcatttgcggatgttgtgata 637 Query: 611 ttgaacaaaattgatttagtaaaagatgatctcgaggatttggaaaggcaaattcatgat 670 |||||||||||||| |||| |||| ||| |||||| ||| || |||| |||| Sbjct: 638 ttgaacaaaattgacctagtggaagacagtcttgaggatctggnnnnncatattcgtgat 697 Query: 671 gtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttgacttaaatacaata 730 || |||| || ||||||||||||||||| || || |||||||||||||| ||| | || Sbjct: 698 gtgaatgctctggttacagtggtgcggtccgtccgttgccaggttgacttgaatgaagta 757 Query: 731 tttgatcgacaggcatatggtgtgaagaattcatcgcaactacaggagcttctggagtac 790 ||| | || || |||||||||| ||||||||||| || || || || || ||||| || Sbjct: 758 tttaaccggcaagcatatggtgccaagaattcatctcatctgcaagaactgctggactat 817 Query: 791 agtaaatcagcaccaccta 809 |||||||||| ||||||| Sbjct: 818 agtaaatcagtgccaccta 836 Score = 206 bits (104), Expect = 2e-49 Identities = 197/228 (86%) Strand = Plus / Plus Query: 893 gaagatcttctttgggagaagaagtccaacatggatatatatcgttgcaaagggatttta 952 ||||||||||||||||| ||||| || | ||||| |||||||| || |||||||||||| Sbjct: 920 gaagatcttctttgggaaaagaaatctattatggacatatatcgctgtaaagggatttta 979 Query: 953 aatatccataattcgaaccaacttcatacattacaggcagtaagggaagtctatgaggtt 1012 |||||||| |||| ||||| ||||||||||||||||||| ||||| |||||||| ||| Sbjct: 980 tatatccatgattcagaccaagttcatacattacaggcagtgagggaggtctatgaagtt 1039 Query: 1013 gtgccggctcgagaatggtctgagacacaacctcgcatgaacaagatagttttcataggc 1072 |||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||| Sbjct: 1040 gtgccggctcgaaaatggtctgagacagagtctcgcatgaacaagatagttgtcataggc 1099 Query: 1073 cgtgatttggatatcagtacccttcaagattcatttagtcgctgcaag 1120 || || ||||||||| | ||||||||||| |||||| | |||||| Sbjct: 1100 cgcaatctggatatcaatgtacttcaagattcttttagtggttgcaag 1147 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 33 tggaggacgacgacgactgtcctcccctcgccgtcgagc 71 ||||||||||||| ||||| ||||| |||||||| |||| Sbjct: 63 tggaggacgacgatgactgccctcctctcgccgttgagc 101
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 228 bits (115), Expect = 5e-56 Identities = 193/219 (88%) Strand = Plus / Plus Query: 175 gttagtcaactacattttgagtggacagcatgggaagagaatagcagtaatactgaacga 234 |||||||||||||||| | |||| || ||||| |||||||| ||||| ||| |||| || Sbjct: 24393681 gttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatga 24393740 Query: 235 gttcggagaggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgccct 294 ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| || || Sbjct: 24393741 gtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgct 24393800 Query: 295 tgttgaggagtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcct 354 |||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 24393801 tgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcct 24393860 Query: 355 ggttcaagcactcgagcaacttgtgcagactaaggagag 393 |||||||||||| ||||| |||||||||| |||||||| Sbjct: 24393861 ggttcaagcacttgagcagcttgtgcagagaaaggagag 24393899 Score = 222 bits (112), Expect = 3e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 175 gttagtcaactacattttgagtggacagcatgggaagagaatagcagtaatactgaacga 234 |||||||||||||||| |||||| || |||||||||||||| ||||| || |||| || Sbjct: 24171374 gttagtcaactacattctgagtgcgcaacatgggaagagaattgcagtggtattgaatga 24171315 Query: 235 gttcggagaggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgccct 294 |||| |||||||||||||| | ||||||||||||||||| ||||||||||||| || || Sbjct: 24171314 gttcagagaggaaattggacttgaaagagcaatgatcaataaggggcaaggtggcgcgct 24171255 Query: 295 tgttgaggagtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcct 354 |||||| |||||||| ||||| |||||||||| ||||||||||| || ||||||||||| Sbjct: 24171254 tgttgaagagtgggtagagctggcaaatggatatgtttgttgcacggtgaaacacagcct 24171195 Query: 355 ggttcaagcactcgagcaacttgtgcagactaagga 390 |||||||||||| ||||| ||||||||||| ||||| Sbjct: 24171194 ggttcaagcacttgagcagcttgtgcagacaaagga 24171159 Score = 149 bits (75), Expect = 4e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 598 ggatgttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaag 657 ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||| Sbjct: 24394856 ggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaag 24394915 Query: 658 gcaaattcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttga 717 ||| |||||||| ||||| | |||||||||||||||| |||||| || ||||||||||| Sbjct: 24394916 gcagattcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttga 24394975 Query: 718 cttaaatacaatatttgatcgacaggcatatggtg 752 |||||||| ||||||||||| || |||||||||| Sbjct: 24394976 cttaaataaaatatttgatcagcaagcatatggtg 24395010 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Minus Query: 598 ggatgttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaag 657 |||||||||||||||||| ||| |||| |||||| |||| |||| |||||||||||||| Sbjct: 24170193 ggatgttgtgatattgaataaagttgacttagtagaagacaatcttgaggatttggaaag 24170134 Query: 658 gcaaattcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttga 717 ||| |||| ||| ||||| | |||||||||||||||| |||||| || || |||||||| Sbjct: 24170133 gcagattcttgaagtcaacgctcttgttacagtggtgcagtctgtacgctgtcaggttga 24170074 Query: 718 cttaaatacaatatttgatcgacaggcatatggtg 752 |||||||| | ||||||||| || |||||||||| Sbjct: 24170073 cttaaataaagtatttgatcagcaagcatatggtg 24170039 Score = 129 bits (65), Expect = 4e-26 Identities = 107/121 (88%) Strand = Plus / Plus Query: 392 agaatggatcatattttattggagacaactggtttggctgatcctgcaccacttgtctcc 451 ||||||||||| || ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 24394338 agaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctct 24394397 Query: 452 attctctggctggacgatcaattggagtcatcaatcagactagactctatcattacggtt 511 ||||| ||||| ||||| || |||||||||||||| | |||||||||||||||||||||| Sbjct: 24394398 attctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggtt 24394457 Query: 512 a 512 | Sbjct: 24394458 a 24394458 Score = 109 bits (55), Expect = 3e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 875 aaggtggaatcatggcttgaagatcttctttgggagaagaagtccaacatggatatatat 934 ||||||||||||||||| || |||||||||||||| | ||||| |||||||||| ||| Sbjct: 24396170 aaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttat 24396229 Query: 935 cgttgcaaagggattttaaatatccataattcgaaccaacttcatacattacagg 989 ||||| |||||||||||| || ||||||| ||| | ||| ||||||||||||||| Sbjct: 24396230 cgttgtaaagggattttacatgtccataactcggatcaagttcatacattacagg 24396284 Score = 101 bits (51), Expect = 8e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 756 agaattcatcgcaactacaggagcttctggagtacagtaaatcagcaccacctaatagtc 815 ||||||||||||| || || || |||||||||||||||||||||| |||||||||| | Sbjct: 24395460 agaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctcc 24395519 Query: 816 gtcatgataacagtatttccacgttgtgcattcatgaacaggatcca 862 ||||||||||||||||||| || ||||| ||| ||| ||||||||| Sbjct: 24395520 gtcatgataacagtatttctaccttgtgtatttgtgagcaggatcca 24395566 Score = 95.6 bits (48), Expect = 5e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 508 ggttattgatgcaaaaaacttcaggcggcaaattgatgaacacacaaactcttcctcgtt 567 |||||||||||||||||||||||||| |||||||||||| |||| || || || || || Sbjct: 24394604 ggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaataagtcatcatcatt 24394663 Query: 568 ccctgaagcatttcaccaaatcgcattcgcgg 599 ||||||||||||||| ||||| ||||| |||| Sbjct: 24394664 ccctgaagcatttcatcaaattgcatttgcgg 24394695 Score = 89.7 bits (45), Expect = 3e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 123 cgccggtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 |||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 24392856 cgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacg 24392908 Score = 85.7 bits (43), Expect = 5e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 508 ggttattgatgcaaaaaacttcaggcggcaaattgatgaacacacaaactcttcctcgtt 567 |||||||||||||||| |||||||| |||||||||||| |||| ||| || || || || Sbjct: 24170443 ggttattgatgcaaaagccttcaggctgcaaattgatgagcacaaaaagtcatcatcatt 24170384 Query: 568 ccctgaagcatttcaccaaatcgcatt 594 ||||||||||||||| ||||| ||||| Sbjct: 24170383 ccctgaagcatttcatcaaattgcatt 24170357 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccgtcgagctc 73 ||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 24392757 cggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctc 24392806 Score = 75.8 bits (38), Expect = 5e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 986 caggcagtaagggaagtctatgaggttgtgccggctcgagaatggtctgagacacaacct 1045 |||||||| |||||||| ||||| ||| |||| |||||||||||||| ||||| || || Sbjct: 24396367 caggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatct 24396426 Query: 1046 cgcatgaacaagatagttttcatagg 1071 |||| |||||||||||| ||||||| Sbjct: 24396427 cgcacaaacaagatagttgtcatagg 24396452 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1079 ttggatatcagtacccttcaagattcatttagtcgctgcaagcactgat 1127 |||||||||| || ||||||||||||||||||||| ||||||||||||| Sbjct: 24396539 ttggatatcaatatccttcaagattcatttagtcgttgcaagcactgat 24396587 Score = 71.9 bits (36), Expect = 7e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 756 agaattcatcgcaactacaggagcttctggagtacagtaaatcagcaccacctaat 811 ||||||||||||| || || || |||||||||||||||||||||| |||||||||| Sbjct: 24169577 agaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaat 24169522 Score = 61.9 bits (31), Expect = 7e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 141 tcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| ||||||||||||||||||||||||| Sbjct: 24172311 tcatcaccgtctacctcggcgccggcaagtccacg 24172277 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccg 65 ||||||| |||||| |||||||||| || ||||||||||||| Sbjct: 24172421 cggcggccatggagaacgacgacgagtgccctcccctcgccg 24172380 Score = 42.1 bits (21), Expect = 6.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 438 caccacttgtctccattctctggctggacgatcaattggagtcatcaat 486 |||| |||||| | ||||| ||||| ||||| || |||||||||||||| Sbjct: 24170667 cacctcttgtccctattctgtggctagacgaccagttggagtcatcaat 24170619 Score = 42.1 bits (21), Expect = 6.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 392 agaatggatcatattttattggagacaactggtttggctgatcctgcaccacttgtc 448 ||||||||| | || ||| | ||||||| || ||||||||||||||||| |||||| Sbjct: 24170723 agaatggattacatattactagagacaataggattggctgatcctgcacctcttgtc 24170667
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 228 bits (115), Expect = 5e-56 Identities = 193/219 (88%) Strand = Plus / Plus Query: 175 gttagtcaactacattttgagtggacagcatgggaagagaatagcagtaatactgaacga 234 |||||||||||||||| | |||| || ||||| |||||||| ||||| ||| |||| || Sbjct: 19548 gttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatga 19607 Query: 235 gttcggagaggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgccct 294 ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| || || Sbjct: 19608 gtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgct 19667 Query: 295 tgttgaggagtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcct 354 |||||| |||||||| ||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 19668 tgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcct 19727 Query: 355 ggttcaagcactcgagcaacttgtgcagactaaggagag 393 |||||||||||| ||||| |||||||||| |||||||| Sbjct: 19728 ggttcaagcacttgagcagcttgtgcagagaaaggagag 19766 Score = 149 bits (75), Expect = 4e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 598 ggatgttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaag 657 ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||| Sbjct: 20723 ggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaag 20782 Query: 658 gcaaattcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttga 717 ||| |||||||| ||||| | |||||||||||||||| |||||| || ||||||||||| Sbjct: 20783 gcagattcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttga 20842 Query: 718 cttaaatacaatatttgatcgacaggcatatggtg 752 |||||||| ||||||||||| || |||||||||| Sbjct: 20843 cttaaataaaatatttgatcagcaagcatatggtg 20877 Score = 129 bits (65), Expect = 4e-26 Identities = 107/121 (88%) Strand = Plus / Plus Query: 392 agaatggatcatattttattggagacaactggtttggctgatcctgcaccacttgtctcc 451 ||||||||||| || ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 20205 agaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctct 20264 Query: 452 attctctggctggacgatcaattggagtcatcaatcagactagactctatcattacggtt 511 ||||| ||||| ||||| || |||||||||||||| | |||||||||||||||||||||| Sbjct: 20265 attctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggtt 20324 Query: 512 a 512 | Sbjct: 20325 a 20325 Score = 109 bits (55), Expect = 3e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 875 aaggtggaatcatggcttgaagatcttctttgggagaagaagtccaacatggatatatat 934 ||||||||||||||||| || |||||||||||||| | ||||| |||||||||| ||| Sbjct: 22037 aaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttat 22096 Query: 935 cgttgcaaagggattttaaatatccataattcgaaccaacttcatacattacagg 989 ||||| |||||||||||| || ||||||| ||| | ||| ||||||||||||||| Sbjct: 22097 cgttgtaaagggattttacatgtccataactcggatcaagttcatacattacagg 22151 Score = 101 bits (51), Expect = 8e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 756 agaattcatcgcaactacaggagcttctggagtacagtaaatcagcaccacctaatagtc 815 ||||||||||||| || || || |||||||||||||||||||||| |||||||||| | Sbjct: 21327 agaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctcc 21386 Query: 816 gtcatgataacagtatttccacgttgtgcattcatgaacaggatcca 862 ||||||||||||||||||| || ||||| ||| ||| ||||||||| Sbjct: 21387 gtcatgataacagtatttctaccttgtgtatttgtgagcaggatcca 21433 Score = 95.6 bits (48), Expect = 5e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 508 ggttattgatgcaaaaaacttcaggcggcaaattgatgaacacacaaactcttcctcgtt 567 |||||||||||||||||||||||||| |||||||||||| |||| || || || || || Sbjct: 20471 ggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaataagtcatcatcatt 20530 Query: 568 ccctgaagcatttcaccaaatcgcattcgcgg 599 ||||||||||||||| ||||| ||||| |||| Sbjct: 20531 ccctgaagcatttcatcaaattgcatttgcgg 20562 Score = 89.7 bits (45), Expect = 3e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 123 cgccggtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 |||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 18723 cgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacg 18775 Score = 75.8 bits (38), Expect = 5e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccgtcgagctc 73 ||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 18624 cggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctc 18673 Score = 75.8 bits (38), Expect = 5e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 986 caggcagtaagggaagtctatgaggttgtgccggctcgagaatggtctgagacacaacct 1045 |||||||| |||||||| ||||| ||| |||| |||||||||||||| ||||| || || Sbjct: 22234 caggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatct 22293 Query: 1046 cgcatgaacaagatagttttcatagg 1071 |||| |||||||||||| ||||||| Sbjct: 22294 cgcacaaacaagatagttgtcatagg 22319 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1079 ttggatatcagtacccttcaagattcatttagtcgctgcaagcactgat 1127 |||||||||| || ||||||||||||||||||||| ||||||||||||| Sbjct: 22406 ttggatatcaatatccttcaagattcatttagtcgttgcaagcactgat 22454
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 222 bits (112), Expect = 3e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 175 gttagtcaactacattttgagtggacagcatgggaagagaatagcagtaatactgaacga 234 |||||||||||||||| |||||| || |||||||||||||| ||||| || |||| || Sbjct: 104789 gttagtcaactacattctgagtgcgcaacatgggaagagaattgcagtggtattgaatga 104730 Query: 235 gttcggagaggaaattggagtagaaagagcaatgatcaacgaggggcaaggtggtgccct 294 |||| |||||||||||||| | ||||||||||||||||| ||||||||||||| || || Sbjct: 104729 gttcagagaggaaattggacttgaaagagcaatgatcaataaggggcaaggtggcgcgct 104670 Query: 295 tgttgaggagtgggtggagctagcaaatggatgcgtttgttgcactgtaaaacacagcct 354 |||||| |||||||| ||||| |||||||||| ||||||||||| || ||||||||||| Sbjct: 104669 tgttgaagagtgggtagagctggcaaatggatatgtttgttgcacggtgaaacacagcct 104610 Query: 355 ggttcaagcactcgagcaacttgtgcagactaagga 390 |||||||||||| ||||| ||||||||||| ||||| Sbjct: 104609 ggttcaagcacttgagcagcttgtgcagacaaagga 104574 Score = 133 bits (67), Expect = 2e-27 Identities = 133/155 (85%) Strand = Plus / Minus Query: 598 ggatgttgtgatattgaacaaaattgatttagtaaaagatgatctcgaggatttggaaag 657 |||||||||||||||||| ||| |||| |||||| |||| |||| |||||||||||||| Sbjct: 103608 ggatgttgtgatattgaataaagttgacttagtagaagacaatcttgaggatttggaaag 103549 Query: 658 gcaaattcatgatgtcaatgagcttgttacagtggtgcggtctgtgcggtgccaggttga 717 ||| |||| ||| ||||| | |||||||||||||||| |||||| || || |||||||| Sbjct: 103548 gcagattcttgaagtcaacgctcttgttacagtggtgcagtctgtacgctgtcaggttga 103489 Query: 718 cttaaatacaatatttgatcgacaggcatatggtg 752 |||||||| | ||||||||| || |||||||||| Sbjct: 103488 cttaaataaagtatttgatcagcaagcatatggtg 103454 Score = 85.7 bits (43), Expect = 5e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 508 ggttattgatgcaaaaaacttcaggcggcaaattgatgaacacacaaactcttcctcgtt 567 |||||||||||||||| |||||||| |||||||||||| |||| ||| || || || || Sbjct: 103858 ggttattgatgcaaaagccttcaggctgcaaattgatgagcacaaaaagtcatcatcatt 103799 Query: 568 ccctgaagcatttcaccaaatcgcatt 594 ||||||||||||||| ||||| ||||| Sbjct: 103798 ccctgaagcatttcatcaaattgcatt 103772 Score = 71.9 bits (36), Expect = 7e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 756 agaattcatcgcaactacaggagcttctggagtacagtaaatcagcaccacctaat 811 ||||||||||||| || || || |||||||||||||||||||||| |||||||||| Sbjct: 102992 agaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaat 102937 Score = 61.9 bits (31), Expect = 7e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 141 tcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| ||||||||||||||||||||||||| Sbjct: 105726 tcatcaccgtctacctcggcgccggcaagtccacg 105692 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 24 cggcggctatggaggacgacgacgactgtcctcccctcgccg 65 ||||||| |||||| |||||||||| || ||||||||||||| Sbjct: 105836 cggcggccatggagaacgacgacgagtgccctcccctcgccg 105795 Score = 42.1 bits (21), Expect = 6.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 438 caccacttgtctccattctctggctggacgatcaattggagtcatcaat 486 |||| |||||| | ||||| ||||| ||||| || |||||||||||||| Sbjct: 104082 cacctcttgtccctattctgtggctagacgaccagttggagtcatcaat 104034 Score = 42.1 bits (21), Expect = 6.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 392 agaatggatcatattttattggagacaactggtttggctgatcctgcaccacttgtc 448 ||||||||| | || ||| | ||||||| || ||||||||||||||||| |||||| Sbjct: 104138 agaatggattacatattactagagacaataggattggctgatcctgcacctcttgtc 104082
>gb|AC189429.1| Brassica rapa subsp. pekinensis clone KBrB066M16, complete sequence Length = 111688 Score = 91.7 bits (46), Expect = 8e-15 Identities = 145/178 (81%) Strand = Plus / Minus Query: 206 gggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaagagca 265 ||||||| |||||| || || ||||| ||||| || || || |||||||| || || || Sbjct: 58292 gggaagaaaatagccgtgattctgaatgagtttggggaagagattggagttgagagggct 58233 Query: 266 atgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaatgga 325 ||||||||||| || |||| |||||||||||||| || ||||| ||||| || ||||| Sbjct: 58232 atgatcaacgaaggtgaaggaggtgcccttgttgaagaatgggtcgagcttgctaatggc 58173 Query: 326 tgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcaga 383 || |||| |||||||| || ||||| || |||||||| |||||||| ||||| |||| Sbjct: 58172 tgtatttgctgcactgtcaagcacagtcttgttcaagctctcgagcagcttgttcaga 58115 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 128 gtcggcgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||| ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 58453 gtcggtgtcactgtcatcactggctatctcggcgccggaaagtccac 58407
>ref|NM_102414.2| Arabidopsis thaliana unknown protein (AT1G26520) mRNA, complete cds Length = 1227 Score = 81.8 bits (41), Expect = 7e-12 Identities = 176/221 (79%) Strand = Plus / Plus Query: 206 gggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaagagca 265 |||||||||||||| || || |||| ||||| || || || |||||||| || || || Sbjct: 222 gggaagagaatagctgtgattttgaatgagtttggggaagagattggagttgagagggct 281 Query: 266 atgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaatgga 325 ||||| ||||| || ||| |||||| ||||||| || ||||| ||||| || ||||| Sbjct: 282 atgattaacgaaggagaagaaggtgccattgttgaagaatgggttgagctcgctaatggc 341 Query: 326 tgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcagact 385 || |||||||| ||||| || || || || |||||||| |||||||| ||||| |||| Sbjct: 342 tgtgtttgttgtactgtcaagcatagtcttgttcaagctctcgagcagcttgttcagaga 401 Query: 386 aaggagagaatggatcatattttattggagacaactggttt 426 || || || | |||||||| |||||||||||||| ||||| Sbjct: 402 aaagacaggcttgatcatatattattggagacaacaggttt 442
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 81.8 bits (41), Expect = 7e-12 Identities = 146/181 (80%) Strand = Plus / Minus Query: 203 catgggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaaga 262 ||||||||||| || || || ||| |||| ||||| || |||||||||||||| |||||| Sbjct: 27872 catgggaagaggattgctgtgatattgaatgagtttggtgaggaaattggagtggaaaga 27813 Query: 263 gcaatgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaat 322 || |||| || || || || ||||||| ||||||| || ||||| || || || ||| Sbjct: 27812 gctttgataaatgaaggagaaagtggtgcagttgttgaagaatgggttgaacttgctaat 27753 Query: 323 ggatgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcag 382 || || ||||||||||||| ||||| || |||||||||| || ||||| ||||||||| Sbjct: 27752 ggctgtatttgttgcactgttaaacatagtttggttcaagcccttgagcagcttgtgcag 27693 Query: 383 a 383 | Sbjct: 27692 a 27692
>dbj|AK222081.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-83-C17 Length = 1295 Score = 81.8 bits (41), Expect = 7e-12 Identities = 176/221 (79%) Strand = Plus / Plus Query: 206 gggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaagagca 265 |||||||||||||| || || |||| ||||| || || || |||||||| || || || Sbjct: 195 gggaagagaatagctgtgattttgaatgagtttggggaagagattggagttgagagggct 254 Query: 266 atgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaatgga 325 ||||| ||||| || ||| |||||| ||||||| || ||||| ||||| || ||||| Sbjct: 255 atgattaacgaaggagaagaaggtgccattgttgaagaatgggttgagctcgctaatggc 314 Query: 326 tgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcagact 385 || |||||||| ||||| || || || || |||||||| |||||||| ||||| |||| Sbjct: 315 tgtgtttgttgtactgtcaagcatagtcttgttcaagctctcgagcagcttgttcagaga 374 Query: 386 aaggagagaatggatcatattttattggagacaactggttt 426 || || || | |||||||| |||||||||||||| ||||| Sbjct: 375 aaagacaggcttgatcatatattattggagacaacaggttt 415
>gb|BT022099.1| Arabidopsis thaliana At1g26520 mRNA, complete cds Length = 1154 Score = 81.8 bits (41), Expect = 7e-12 Identities = 176/221 (79%) Strand = Plus / Plus Query: 206 gggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaagagca 265 |||||||||||||| || || |||| ||||| || || || |||||||| || || || Sbjct: 221 gggaagagaatagctgtgattttgaatgagtttggggaagagattggagttgagagggct 280 Query: 266 atgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaatgga 325 ||||| ||||| || ||| |||||| ||||||| || ||||| ||||| || ||||| Sbjct: 281 atgattaacgaaggagaagaaggtgccattgttgaagaatgggttgagctcgctaatggc 340 Query: 326 tgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcagact 385 || |||||||| ||||| || || || || |||||||| |||||||| ||||| |||| Sbjct: 341 tgtgtttgttgtactgtcaagcatagtcttgttcaagctctcgagcagcttgttcagaga 400 Query: 386 aaggagagaatggatcatattttattggagacaactggttt 426 || || || | |||||||| |||||||||||||| ||||| Sbjct: 401 aaagacaggcttgatcatatattattggagacaacaggttt 441
>gb|AF142479.1|AF142479 Aegilops squarrosa NADH dehydrogenase subunit 3 (nad3) gene, partial cds; ribosomal protein S12 (rps12) gene, complete cds; coxII pseudogene, complete sequence; and ORF165 gene, partial cds; mitochondrial genes for mitochondrial products Length = 1844 Score = 79.8 bits (40), Expect = 3e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 457 aatggaagatgcctctggaactttttggttcttttttgggggcg 500
>gb|AF511564.1| Pennisetum glaucum mitochondrial gene sequence Length = 538 Score = 71.9 bits (36), Expect = 7e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 318 aatggaagatgcctctggaacttttgggttcttttttgggggcg 361
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 71.9 bits (36), Expect = 7e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 340677 aatggaagatgcctctggaacttttgggttcttttttgggggcg 340634
>emb|X59153.1|MITANAD3R Wheat mitochondrial nad3 gene, rps12 gene, ORF156 and COXII pseudogene for NADH dehydrogenase subunit 3, ribosomal protein S12, and an unknown (18kDA) membrane bound protein Length = 3240 Score = 71.9 bits (36), Expect = 7e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 809 aatggaagatgcctctggaacttttgggttcttttttgggggcg 852
>emb|X14262.1|MITANAD3 Wheat mitochondrial genes for transfer RNA-Ser (GCU), NADH dehydrogenase subunit 3 and ribosomal protein S12 Length = 2341 Score = 71.9 bits (36), Expect = 7e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 2087 aatggaagatgcctctggaacttttgggttcttttttgggggcg 2130
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 67.9 bits (34), Expect = 1e-07 Identities = 142/178 (79%) Strand = Plus / Plus Query: 206 gggaagagaatagcagtaatactgaacgagttcggagaggaaattggagtagaaagagca 265 |||||||||||||| || || |||| ||||| || || || |||||||| || || || Sbjct: 35131 gggaagagaatagctgtgattttgaatgagtttggggaagagattggagttgagagggct 35190 Query: 266 atgatcaacgaggggcaaggtggtgcccttgttgaggagtgggtggagctagcaaatgga 325 ||||| ||||| || ||| |||||| ||||||| || ||||| ||||| || ||||| Sbjct: 35191 atgattaacgaaggagaagaaggtgccattgttgaagaatgggttgagctcgctaatggc 35250 Query: 326 tgcgtttgttgcactgtaaaacacagcctggttcaagcactcgagcaacttgtgcaga 383 || |||||||| ||||| || || || || |||||||| |||||||| ||||| |||| Sbjct: 35251 tgtgtttgttgtactgtcaagcatagtcttgttcaagctctcgagcagcttgttcaga 35308 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 gatcatattttattggagacaactggttt 426 |||||||| |||||||||||||| ||||| Sbjct: 35564 gatcatatattattggagacaacaggttt 35592
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaag 169 |||||||||| |||||||||| ||||||||||||||| Sbjct: 951429 cgtcaccgtcctcaccggctatctcggcgccggcaag 951465 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 726297 cgtcaccgtgatcaccggctttctcggcgccggcaagaccacg 726255
>gb|M62866.1|PSECOBGEN P.denitrificans cobN, cobO, cobP, cobQ, cobW, and ORF6-9 genes, complete cds Length = 13170 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 137 accgtcatcaccggctacctcggcgccggcaag 169 |||||||||||||||| |||||||||||||||| Sbjct: 3931 accgtcatcaccggcttcctcggcgccggcaag 3963
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 137 accgtcatcaccggctacctcggcgccggcaa 168 |||||||||||||||| ||||||||||||||| Sbjct: 2993552 accgtcatcaccggcttcctcggcgccggcaa 2993521
>gb|DQ984517.1| Tripsacum dactyloides cultivar Pete mitochondrion, complete genome Length = 704100 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| |||||||||||| |||| ||||||| Sbjct: 651626 aatggaagatgcctctggaactttttggttattttgggggggcg 651669
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 5372853 cgtcaccgtgctcaccggctatctcggcgccggcaagaccacg 5372895 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| ||||||||| ||||||||||||||| ||||| Sbjct: 2469791 cgtcaccgtgctcaccggctttctcggcgccggcaagaccacg 2469833
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 65812 aatggaagatgcctctggaactttttggttatttt 65846
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 176291 aatggaagatgcctctggaactttttggttatttt 176325
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 176395 aatggaagatgcctctggaactttttggttatttt 176429
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 176395 aatggaagatgcctctggaactttttggttatttt 176429
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 177369 aatggaagatgcctctggaactttttggttatttt 177403
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 20494649 aatggaagatgcctctggaactttttggttatttt 20494683 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 20619691 aatggaagatgcctctggaactttttggttatttt 20619725 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 20727948 aatggaagatgcctctggaactttttggttatttt 20727982
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 12993915 aatggaagatgcctctggaactttttggttatttt 12993949 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1412 accgtgttcgtgttcggtttcg 1433 |||||||||||||||||||||| Sbjct: 15274068 accgtgttcgtgttcggtttcg 15274047
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 259595 cgtcaccgtgctcaccggctatctcggcgccggcaagaccacg 259637
>dbj|D21251.1|RICMTRP Oryza sativa (japonica cultivar-group) mitochondrial genes for ribosomal protein S3, L16, S12 and NADH dehydrogenase subunit 3, complete cds Length = 7500 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 6835 aatggaagatgcctctggaactttttggttatttt 6869
>emb|AL731738.6|CNS08C7N Oryza sativa chromosome 12, . BAC OSJNBa0005K20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 143618 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 98584 aatggaagatgcctctggaactttttggttatttt 98550
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 25789 aatggaagatgcctctggaactttttggttatttt 25823
>emb|AL713949.4|CNS07YPS Oryza sativa chromosome 12, . BAC OJ1521_B04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113752 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 30353 aatggaagatgcctctggaactttttggttatttt 30387
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 17052 aatggaagatgcctctggaactttttggttatttt 17018
>gb|M57904.1|RICMTNAD3A Oryza sativa mitochondrial nad3 gene and rps12 gene, complete cds Length = 1740 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 1488 aatggaagatgcctctggaactttttggttatttt 1522
>dbj|D32052.1|RICMTNAD Oryza sativa (japonica cultivar-group) mitochondrion genes for NADH dehydrogenase subunits, ribosomal proteins and tRNA-fMet, partial cds Length = 27588 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| |||||||||||| |||| Sbjct: 24094 aatggaagatgcctctggaactttttggttatttt 24060
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||| || ||||||||| |||||||||||||||| |||| Sbjct: 2263897 cgtcaccatcgtcaccggcttcctcggcgccggcaagaccac 2263938 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 5435895 cgtcaccgtgctcaccggcttcctcggcgccggcaagaccac 5435854
>ref|NM_001060288.1| Oryza sativa (japonica cultivar-group) Os04g0599700 (Os04g0599700) mRNA, complete cds Length = 1523 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 caccgtcatcaccggctacctcggcgccggcaag 169 ||||||||||||||||| ||||||| |||||||| Sbjct: 260 caccgtcatcaccggcttcctcggctccggcaag 293
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||| || ||||||||| |||||||||||||||| |||| Sbjct: 3305466 cgtcaccatcgtcaccggcttcctcggcgccggcaagaccac 3305425 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 5163438 cgtcaccgtgctcaccggcttcctcggcgccggcaagaccac 5163397
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 140 gtcatcaccggctacctcggcgccggcaag 169 ||||||||||||| |||||||||||||||| Sbjct: 2604337 gtcatcaccggcttcctcggcgccggcaag 2604308
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 137 accgtcatcaccggctacctcggcgccggcaagtccac 174 |||||||||||||||| ||||||||||||||| |||| Sbjct: 4832098 accgtcatcaccggctttctcggcgccggcaagaccac 4832135
>gb|AE005705.1| Caulobacter crescentus CB15 section 31 of 359 of the complete genome Length = 11217 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||||| |||||||||| ||||||||||||||| |||| Sbjct: 10024 cgtcaccgtgctcaccggctatctcggcgccggcaagaccac 10065
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 caccgtcatcaccggctacctcggcgccggcaag 169 ||||||||||||||||| ||||||| |||||||| Sbjct: 30298519 caccgtcatcaccggcttcctcggctccggcaag 30298552
>dbj|AK065249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J04, full insert sequence Length = 1525 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 caccgtcatcaccggctacctcggcgccggcaag 169 ||||||||||||||||| ||||||| |||||||| Sbjct: 262 caccgtcatcaccggcttcctcggctccggcaag 295
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 136 caccgtcatcaccggctacctcggcgccggcaag 169 ||||||||||||||||| ||||||| |||||||| Sbjct: 48415 caccgtcatcaccggcttcctcggctccggcaag 48448
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 50.1 bits (25), Expect = 0.026 Identities = 34/37 (91%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaag 169 ||||||||| |||||||||| ||||||||||||||| Sbjct: 5151097 cgtcaccgtgctcaccggctatctcggcgccggcaag 5151061 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| ||||||||| ||||||||||||||| ||||| Sbjct: 832969 cgtcaccgtgctcaccggctttctcggcgccggcaagaccacg 832927
>emb|CT005232.1| upland soil cluster alpha (USCalpha), overlapping fosmid clones from an as-yet-uncultured methane oxidizer, complete sequence Length = 42329 Score = 50.1 bits (25), Expect = 0.026 Identities = 34/37 (91%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaag 169 ||||||||| |||||||||| ||||||||||||||| Sbjct: 14334 cgtcaccgtgctcaccggctatctcggcgccggcaag 14370
>gb|DQ645537.1| Zea luxurians mitochondrion, complete genome Length = 539368 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 301302 aatggaagatgcctctggaacttattggttattttgggggggcg 301345
>gb|DQ645539.1| Zea mays subsp. parviglumis mitochondrion, complete genome Length = 680603 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 107782 aatggaagatgcctctggaacttattggttattttgggggggcg 107739
>gb|DQ645538.1| Zea perennis mitochondrion, complete genome Length = 570354 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 283229 aatggaagatgcctctggaacttattggttattttgggggggcg 283272
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 14197 aatggaagatgcctctggaacttattggttattttgggggggcg 14154
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 603432 aatggaagatgcctctggaacttattggttattttgggggggcg 603389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 42281 aatggaagatgcctctggaacttattggttattttgggggggcg 42324
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttcttttttgggggcg 1531 ||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 262384 aatggaagatgcctctggaacttattggttattttgggggggcg 262341
>gb|DQ984518.1| Sorghum bicolor mitochondrion, complete genome Length = 468628 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1488 aatggaagatgcctctgaaactttttg 1514 ||||||||||||||||| ||||||||| Sbjct: 67674 aatggaagatgcctctggaactttttg 67700
>gb|DQ645536.1| Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome Length = 739719 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1488 aatggaagatgcctctgaaactttttggttctttt 1522 ||||||||||||||||| ||||| |||||| |||| Sbjct: 539489 aatggaagatgcctctggaacttattggttatttt 539455
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Minus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 ||||||||| | |||||||| ||||||||||||||| ||||| Sbjct: 3773394 cgtcaccgtgctgaccggctatctcggcgccggcaagaccacg 3773352
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccacg 175 |||||| || ||||| |||| |||||||||||||||| ||||| Sbjct: 1482371 cgtcacggtgatcacgggcttcctcggcgccggcaagaccacg 1482413
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaag 169 ||||||||||||||||||||||| Sbjct: 2329039 ccggctacctcggcgccggcaag 2329017
>ref|XM_001224883.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07228) mRNA, complete cds Length = 1167 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 135 tcaccgtcatcaccggctacctcggcgccggcaa 168 ||||| || ||||||||| ||||||||||||||| Sbjct: 59 tcaccatcgtcaccggcttcctcggcgccggcaa 92
>ref|NM_001064430.1| Oryza sativa (japonica cultivar-group) Os06g0566500 (Os06g0566500) mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 17 ccgcttcctcctccgcctccgc 38
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Plus Query: 133 cgtcaccgtcatcaccggctacctcggcgccggcaagtccac 174 ||||||||| | |||||||| ||||||||||||||| |||| Sbjct: 5391685 cgtcaccgtgctgaccggctatctcggcgccggcaagaccac 5391726
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1505 aaactttttggttcttttttgg 1526 |||||||||||||||||||||| Sbjct: 20209 aaactttttggttcttttttgg 20230
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1412 accgtgttcgtgttcggtttcg 1433 |||||||||||||||||||||| Sbjct: 129701 accgtgttcgtgttcggtttcg 129680
>gb|AC132003.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091D07, complete sequence Length = 144652 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1412 accgtgttcgtgttcggtttcg 1433 |||||||||||||||||||||| Sbjct: 16259 accgtgttcgtgttcggtttcg 16238
>emb|BX950226.13| Zebrafish DNA sequence from clone CH211-105P23 in linkage group 7, complete sequence Length = 174681 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 323 ggatgcgtttgttgcactgtaaaaca 348 ||||| |||||||||||||||||||| Sbjct: 79749 ggatgagtttgttgcactgtaaaaca 79724
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 ccgcttcctcctccgcctccgcgccg 127 |||||||| ||||||||||||||||| Sbjct: 9867864 ccgcttccgcctccgcctccgcgccg 9867839
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 21493391 ccgcttcctcctccgcctccgc 21493412 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tcccgcttcctcctccgcctc 120 ||||||||||||||||||||| Sbjct: 25293796 tcccgcttcctcctccgcctc 25293776
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1505 aaactttttggttcttttttgg 1526 |||||||||||||||||||||| Sbjct: 32814208 aaactttttggttcttttttgg 32814187
>emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 in linkage group 7, complete sequence Length = 166088 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 323 ggatgcgtttgttgcactgtaaaaca 348 ||||| |||||||||||||||||||| Sbjct: 18474 ggatgagtttgttgcactgtaaaaca 18499
>emb|BX031311.1|CNS08WBN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46CH01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 282 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1414 cgtgttcgtgttcggtttcgca 1435 |||||||||||||||||||||| Sbjct: 224 cgtgttcgtgttcggtttcgca 245
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 102 ccgcttcctcctccgcctccgcgccg 127 |||||||| ||||||||||||||||| Sbjct: 100343 ccgcttccgcctccgcctccgcgccg 100318
>gb|AC018890.13| Homo sapiens BAC clone RP11-493G24 from 2, complete sequence Length = 173965 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 gaggaaattggagtagaaagag 263 |||||||||||||||||||||| Sbjct: 167727 gaggaaattggagtagaaagag 167706
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcaccggctacctcggcgccggcaag 169 |||||||| ||||||||||||||||| Sbjct: 808919 tcaccggcgacctcggcgccggcaag 808894 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 137 accgtcatcaccggctacctcggcgccggcaag 169 |||||| | |||||||| ||||||||||||||| Sbjct: 8517445 accgtcctgaccggctatctcggcgccggcaag 8517413
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tcaccggctacctcggcgccggcaag 169 ||||||||| |||||||||||||||| Sbjct: 1149834 tcaccggcttcctcggcgccggcaag 1149859 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 tcaccggctacctcggcgccggcaag 169 |||||||||| ||||||||||||||| Sbjct: 4092157 tcaccggctatctcggcgccggcaag 4092132
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 50575 ccgcttcctcctccgcctccgc 50596
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 127891 ccgcttcctcctccgcctccgc 127912
>dbj|AK069227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C03, full insert sequence Length = 984 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 25 ccgcttcctcctccgcctccgc 46
>dbj|AK063099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C05, full insert sequence Length = 958 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccgc 123 |||||||||||||||||||||| Sbjct: 17 ccgcttcctcctccgcctccgc 38
>gb|AF042096.3|AF042096 Bradyrhizobium japonicum UbiE (ubiE) gene, partial cds; AarF (aarF), panthotenate metabolism flavoprotein (dfp), deoxyuridine-triphosphatase (dut), putative sensor protein (bdfA), GalF-like (galF), hypothetical protein genes, complete cds; putative helicase 2 gene, partial cds; and unknown genes Length = 13289 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 tcaccggctacctcggcgccggcaag 169 |||||||| ||||||||||||||||| Sbjct: 7122 tcaccggcgacctcggcgccggcaag 7147
>gb|AC192348.4| Rhesus Macaque BAC CH250-193G17 () complete sequence Length = 176096 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 aaaattgatttagtaaaagat 637 ||||||||||||||||||||| Sbjct: 124967 aaaattgatttagtaaaagat 124987
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 65164 ccggcttcctcggcgccggcaagaccacg 65192
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ctcccctcgccgtcgagctcc 74 ||||||||||||||||||||| Sbjct: 7334358 ctcccctcgccgtcgagctcc 7334338
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 7291 ccggcttcctcggcgccggcaagaccacg 7263
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 50568 ccggcttcctcggcgccggcaagaccacg 50540
>gb|BT025167.1| Arabidopsis thaliana At4g27540 mRNA, complete cds Length = 726 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 119 ccgcttcctcctccgcctccg 139
>ref|NM_118889.1| Arabidopsis thaliana unknown protein (AT4G27540) mRNA, complete cds Length = 1047 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 204 ccgcttcctcctccgcctccg 224
>gb|AC161225.14| Mus musculus chromosome 5, clone RP23-37G13, complete sequence Length = 165525 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1148 accatgtacctgtgtcattggatacttca 1176 ||||||||||||| |||||||| |||||| Sbjct: 32640 accatgtacctgtttcattggaaacttca 32668
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 2878524 ccggcttcctcggcgccggcaagaccacg 2878552
>ref|XM_882910.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 18 (LOC511794), mRNA Length = 3436 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882901.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 17 (LOC511794), mRNA Length = 3523 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882893.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 16 (LOC511794), mRNA Length = 2813 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882888.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 15 (LOC511794), mRNA Length = 3334 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882879.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 14 (LOC511794), mRNA Length = 3505 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882873.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 13 (LOC511794), mRNA Length = 3421 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882867.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 12 (LOC511794), mRNA Length = 3421 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882861.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 11 (LOC511794), mRNA Length = 3418 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882855.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 10 (LOC511794), mRNA Length = 3421 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882848.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 9 (LOC511794), mRNA Length = 3496 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_589200.2| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 1 (LOC511794), mRNA Length = 2056 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882833.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 8 (LOC511794), mRNA Length = 2083 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882828.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 7 (LOC511794), mRNA Length = 3328 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882823.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 6 (LOC511794), mRNA Length = 3325 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882819.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 5 (LOC511794), mRNA Length = 3244 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882813.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 4 (LOC511794), mRNA Length = 3250 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882808.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 3 (LOC511794), mRNA Length = 2778 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 624 gaggatttggaaaggcaaatt 644
>ref|XM_882801.1| PREDICTED: Bos taurus similar to zinc finger protein 192, transcript variant 2 (LOC511794), mRNA Length = 3480 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 gaggatttggaaaggcaaatt 664 ||||||||||||||||||||| Sbjct: 581 gaggatttggaaaggcaaatt 601
>gb|AC146440.5| Pan troglodytes BAC clone RP43-11P11 from 7, complete sequence Length = 181369 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 617 aaaattgatttagtaaaagat 637 ||||||||||||||||||||| Sbjct: 40995 aaaattgatttagtaaaagat 40975
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 229958 ccggcttcctcggcgccggcaagaccacg 229930
>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence Length = 167269 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1148 accatgtacctgtgtcattggatacttca 1176 ||||||||||||| |||||||| |||||| Sbjct: 125058 accatgtacctgtttcattggaaacttca 125086
>gb|AC145985.2| Pan troglodytes BAC clone RP43-17I24 from 7, complete sequence Length = 162953 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1075 tgatttggatatcagtaccct 1095 ||||||||||||||||||||| Sbjct: 132524 tgatttggatatcagtaccct 132544
>gb|AY056023.1| Mycobacterium avium plasmid pVT2, complete sequence Length = 12868 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1414 cgtgttcgtgttcggtttcgc 1434 ||||||||||||||||||||| Sbjct: 5427 cgtgttcgtgttcggtttcgc 5407
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 142 catcaccggctacctcggcgccggcaagtccac 174 ||||| ||||||| |||||||||||||||||| Sbjct: 1999204 catcatcggctactccggcgccggcaagtccac 1999236
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 137 accgtcatcaccggctacctcggcgccggcaag 169 |||||||||||||||| ||||| ||||||||| Sbjct: 34207 accgtcatcaccggctttctcggtgccggcaag 34175
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1060 agttttcataggccgtgattt 1080 ||||||||||||||||||||| Sbjct: 1130051 agttttcataggccgtgattt 1130071
>dbj|AK085682.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730010J06 product:unclassifiable, full insert sequence Length = 2124 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1148 accatgtacctgtgtcattggatacttca 1176 ||||||||||||| |||||||| |||||| Sbjct: 1670 accatgtacctgtttcattggaaacttca 1698
>gb|AC113167.2| Homo sapiens chromosome 5 clone CTC-529J12, complete sequence Length = 140187 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 863 gttaacttggctaaggtggaa 883 ||||||||||||||||||||| Sbjct: 128583 gttaacttggctaaggtggaa 128563
>gb|AC093657.4| Homo sapiens BAC clone RP11-447B21 from 4, complete sequence Length = 162689 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1383 atttgtatatgttcagtatag 1403 ||||||||||||||||||||| Sbjct: 29971 atttgtatatgttcagtatag 29991
>gb|AC010599.8| Homo sapiens chromosome 5 clone CTC-561L20, complete sequence Length = 114411 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 863 gttaacttggctaaggtggaa 883 ||||||||||||||||||||| Sbjct: 4667 gttaacttggctaaggtggaa 4647
>gb|AY084728.1| Arabidopsis thaliana clone 115976 mRNA, complete sequence Length = 1047 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 204 ccgcttcctcctccgcctccg 224
>gb|AF283502.1| Cryphonectria parasitica Crypt1 transposon transposase gene, complete cds Length = 3563 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tcctcccctcgccgtcgagct 72 ||||||||||||||||||||| Sbjct: 2472 tcctcccctcgccgtcgagct 2492
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 7178 ccggcttcctcggcgccggcaagaccacg 7150
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 65025 ccgcttcctcctccgcctccg 65005
>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project) Length = 82381 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 78131 ccgcttcctcctccgcctccg 78111
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ccgcttcctcctccgcctccg 122 ||||||||||||||||||||| Sbjct: 4315 ccgcttcctcctccgcctccg 4295
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tcccgcttcctcctccgcctc 120 ||||||||||||||||||||| Sbjct: 112404 tcccgcttcctcctccgcctc 112384
>dbj|BS000210.2| Pan troglodytes chromosome 22 clone:RP43-018H16, map 22, complete sequences Length = 148120 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 ggagaggaaattggagtagaaagag 263 ||||||||||||| ||||||||||| Sbjct: 19990 ggagaggaaattgaagtagaaagag 20014
>gb|AC006343.3| Homo sapiens PAC clone RP4-548K24 from 7q34-q36, complete sequence Length = 124877 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 aaaattgatttagtaaaagat 637 ||||||||||||||||||||| Sbjct: 26146 aaaattgatttagtaaaagat 26166
>emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in linkage group 21, complete sequence Length = 211164 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1412 accgtgttcgtgttcggtttc 1432 ||||||||||||||||||||| Sbjct: 155952 accgtgttcgtgttcggtttc 155932
>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 ggagaggaaattggagtagaaagag 263 ||||||||||||| ||||||||||| Sbjct: 275811 ggagaggaaattgaagtagaaagag 275835
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 7123 ccggcttcctcggcgccggcaagaccacg 7095
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1060 agttttcataggccgtgattt 1080 ||||||||||||||||||||| Sbjct: 3095238 agttttcataggccgtgattt 3095218
>gb|AF110185.1|AF110185 Burkholderia pseudomallei strain 1026b DbhB (dbhB), general secretory pathway protein D (gspD), general secretory pathway protein E (gspE), general secretory pathway protein F (gspF), GspC (gspC), general secretory pathway protein G (gspG), general secretory pathway protein H (gspH), general secretory pathway protein I (gspI), general secretory pathway protein J (gspJ), general secretory pathway protein K (gspK), general secretory pathway protein L (gspL), general secretory pathway protein M (gspM), and general secretory pathway protein N (gspN) genes, complete cds; and unknown genes Length = 20302 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 ccggctacctcggcgccggcaagtccacg 175 |||||| |||||||||||||||| ||||| Sbjct: 2390 ccggcttcctcggcgccggcaagaccacg 2362
>dbj|AP001597.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1951E10, APP-D21S292 region, complete sequence Length = 176741 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 ggagaggaaattggagtagaaagag 263 ||||||||||||| ||||||||||| Sbjct: 37762 ggagaggaaattgaagtagaaagag 37786 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 306,406,638 Number of extensions: 16087237 Number of successful extensions: 336256 Number of sequences better than 10.0: 136 Number of HSP's gapped: 336245 Number of HSP's successfully gapped: 191 Length of query: 1671 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1648 Effective length of database: 18,503,978,556 Effective search space: 30494556660288 Effective search space used: 30494556660288 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)