| Clone Name | FLbaf48e06 |
|---|---|
| Clone Library Name | barley_pub |
>Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 - Mus musculus (Mouse)| Length = 946 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = +1 Query: 214 PG*RCRTSPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPP 378 P R R SPS P P P P RR + P RRR P SP + PP Sbjct: 565 PPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSP-SPRRYSPP 618 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = +1 Query: 235 SPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPPA 381 SP R P A P P P RR P RRR P P P+ Sbjct: 563 SPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPS 611
>Q9NYQ7:CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 precursor - Homo| sapiens (Human) Length = 3312 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +1 Query: 214 PG*RCRTSPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRR 345 PG P SG P+P L PKPV S+R A R+R Sbjct: 155 PGALSSGVPGSGNSSPLPSDFLIRHHGPKPVSSQRNAGTGSRKR 198
>Q9Y6N7:ROBO1_HUMAN Roundabout homolog 1 precursor - Homo sapiens (Human)| Length = 1651 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 Query: 241 SSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSP 360 S+ T P P L P+ P E+ P+RRR PVSP Sbjct: 1259 STATLTPSPQEELQPMLQDCPEETGHMQHQPDRRRQPVSP 1298
>Q6AX31:NDC1_XENLA Nucleoporin NDC1 - Xenopus laevis (African clawed frog)| Length = 660 Score = 30.8 bits (68), Expect = 2.6 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 326 QSPNADALL-FPRMSIFLQLWNSGFSLDSFWHIDVISYRCY 445 Q P+ D L F +S+F Q+W SG L + W++ I +R Y Sbjct: 242 QQPSLDTLRGFLNLSLFYQIWLSGTFLLATWYMVWILFRIY 282
>Q16992:LWA_ANTEL LWamide neuropeptides precursor [Contains: LWamide I; Metamorphosin| A - Anthopleura elegantissima (Sea anemone) Length = 514 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -1 Query: 358 GKQEGVGVRGLQRSDGTPQVWGQRWAPRLYPGSA 257 GK++ +G+ G G P +WG+R +P L+ SA Sbjct: 82 GKRQKIGLWGRSADAGQPGLWGKRQSPGLWGRSA 115
>Q16998:LWA_ACTEQ LWamide neuropeptides precursor [Contains: LWamide I; LWamide II;| LWamide III; LWamide IV; LWamide V; LWamide VI; Metamorphosin A - Actinia equina (European sea anemone) Length = 164 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 358 GKQEGVGVRGLQRSDGTPQVWGQRWAPRLYPGSAVP 251 GK++ G+ G G P +WG+R P L+ SA P Sbjct: 33 GKRQNPGLWGRSAEPGQPGLWGKRQNPGLWGRSAEP 68
>Q5PQP9:ARMC5_RAT Armadillo repeat-containing protein 5 - Rattus norvegicus (Rat)| Length = 926 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 Query: 14 PEAAALVLADSPSPARLKPLTSSALARARKQQQLCPELLAPC 139 P A+ + P+PA PLT SA R RK L +LA C Sbjct: 94 PSVASAGSSPGPAPAAESPLTLSAPMRLRKTLDLALSILANC 135
>P29229:VLPB_MYCHR Variant surface antigen B precursor - Mycoplasma hyorhinis| Length = 174 Score = 30.4 bits (67), Expect = 3.3 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = -3 Query: 401 GKILNSRAGGRCSCGETGGRRRSGTAAQRRDSTGLGSEMGAKAVSGIGRPVPDDG 237 G R+G S TGG+ +G+ +Q + G GS+ G G D G Sbjct: 67 GTTTGGRSGSGSSSSTTGGQTGTGSDSQDSGAKGTGSDSQDSGAKGTGSDSQDSG 121
>Q5FPX3:TRUA_GLUOX tRNA pseudouridine synthase A - Gluconobacter oxydans| (Gluconobacter suboxydans) Length = 275 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -1 Query: 349 EGVGVRGLQRSDGTPQVWG--QRWAPRLYPGSAVPSPTTARSDSVIRAAMAWLLLASRSP 176 +G G G Q+ + + G + A +L VPS T R+D+ + A A +++ P Sbjct: 30 DGTGYLGWQKQNDGTSIQGLIEAAASKLVRNRPVPSITAGRTDAGVHA--AGMVIHLDFP 87 Query: 175 AVAPVIGRQGKDARG 131 AP+ RQ +D G Sbjct: 88 DDAPIDARQIRDGMG 102
>Q8K4Z5:SF3A1_MOUSE Splicing factor 3 subunit 1 - Mus musculus (Mouse)| Length = 791 Score = 30.4 bits (67), Expect = 3.4 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +1 Query: 238 PSSGTGRPI---PDTALA-PISDPKPVESRRCAAVPERRRPPVSPHEHLPPALEFRIFPR 405 PSS T P P T++ P + P PV + +AVP RPP++ LPP P Sbjct: 558 PSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPMASVVRLPPGSVIAPMPP 617 Query: 406 FILA 417 I A Sbjct: 618 IIHA 621
>Q15459:SF3A1_HUMAN Splicing factor 3 subunit 1 - Homo sapiens (Human)| Length = 793 Score = 30.4 bits (67), Expect = 3.4 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +1 Query: 238 PSSGTGRPI---PDTALA-PISDPKPVESRRCAAVPERRRPPVSPHEHLPPALEFRIFPR 405 PSS T P P T++ P + P PV + +AVP RPP++ LPP P Sbjct: 560 PSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRPPMASVVRLPPGSVIAPMPP 619 Query: 406 FILA 417 I A Sbjct: 620 IIHA 623
>Q9NZM4:GSCR1_HUMAN Glioma tumor suppressor candidate region gene 1 protein - Homo| sapiens (Human) Length = 1509 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = +1 Query: 217 G*RCRTSPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPH--------EHL 372 G + + +G + + +TAL P+ P P + A P R PP P +H Sbjct: 1256 GLKLKIKQEAGLSKVVHNTALDPVHQPPPPPATLKVAEPPPRPPPPPPPTGQMNGTVDHP 1315 Query: 373 PPA 381 PPA Sbjct: 1316 PPA 1318
>P47068:BBC1_YEAST Myosin tail region-interacting protein MTI1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 1157 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = +1 Query: 238 PSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPPALEFRIFP 402 PS+ + P+P P + P P +A PPV P PPAL P Sbjct: 695 PSAPSAPPVPSAPSVPSAPPVPPAPPALSAPSVPPVPPVPPVSSAPPALSAPSIP 749
>Q9JLF6:TGM1_MOUSE Protein-glutamine gamma-glutamyltransferase K - Mus musculus| (Mouse) Length = 815 Score = 30.0 bits (66), Expect = 4.4 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 10/74 (13%) Frame = -3 Query: 416 ARMNLGKILNSRAGGRCSCGETG---------GRRRSGTAAQRRDSTGLGSEMGAKAVS- 267 +R G+ +R G CSCG G G R GT+++ RDS G G + S Sbjct: 38 SRRGGGRSFWARCCGCCSCGNRGDDDWGPEPSGSRSRGTSSRGRDSRG-----GRRPESR 92 Query: 266 GIGRPVPDDGEVRQ 225 G G DG +R+ Sbjct: 93 GSGVNAAGDGTIRE 106
>P52950:DBX1_MOUSE Homeobox protein DBX1 - Mus musculus (Mouse)| Length = 335 Score = 30.0 bits (66), Expect = 4.4 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +1 Query: 235 SPSSGTGR-PIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPPALEFRIFPRFI 411 SP SG+ R P TAL+P S+P ++ A + R SP P + FP F Sbjct: 84 SPGSGSRRGSSPQTALSPASEPTFLKFGVNAILSSAPRRETSPALLQSPPPKTFAFPYFE 143 Query: 412 LAY*CYIIXXXXXXANSIVPI 474 ++ +I ++S+VPI Sbjct: 144 GSFQPFIRSSYFPASSSVVPI 164
>Q9UNU6:CP8B1_HUMAN Cytochrome P450 8B1 - Homo sapiens (Human)| Length = 501 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +2 Query: 371 FLQLWNSGFSLD-SFWHIDVISYRCYYRPQTA*Y--RFGY 481 F+ L + G+SLD S WH D + CYY TA Y FGY Sbjct: 149 FVMLTSKGWSLDASCWHEDSLFRFCYYILFTAGYLSLFGY 188
>Q3YEC7:PARF_HUMAN Putative GTP-binding protein Parf - Homo sapiens (Human)| Length = 729 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = +1 Query: 235 SPSSGTGRPIP-----DTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPP 378 SPS G+ P+ T + P+P A P PPV P E LPP Sbjct: 292 SPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPP 344
>Q8R1F1:NIBL_MOUSE Niban-like protein - Mus musculus (Mouse)| Length = 749 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +1 Query: 280 APISDPKPV-ESRRCAAVPERRRPPVSPHEHLPP 378 +P+ + PV ES + AVPE PP SP HLPP Sbjct: 674 SPLLNGAPVQESSQPVAVPEAS-PPASPLRHLPP 706
>Q9D2Z8:KIF12_MOUSE Kinesin-like protein KIF12 - Mus musculus (Mouse)| Length = 642 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 301 VWGQRWAPRLYPGSAVPSPTTARSDSVIRAAMAWLLLASRSPAVAP 164 VW WAP PGSA P ++SD +A +L+ AP Sbjct: 537 VWPPPWAPPPSPGSAKPPRERSQSDWTQTRVLAEMLMGEEVVPSAP 582
>P12111:CO6A3_HUMAN Collagen alpha-3(VI) chain precursor - Homo sapiens (Human)| Length = 3176 Score = 29.6 bits (65), Expect = 5.8 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -1 Query: 340 GVRGLQRSDGTPQVWGQRWAPRLYPGSAVPSPTTARSDSVIRAAM 206 G+RG + + G P + GQ+ P YPG A P R DS+ + A+ Sbjct: 2338 GIRGRRGNSGPPGIVGQKGRPG-YPGPA--GPRGNRGDSIDQCAL 2379
>O00401:WASL_HUMAN Neural Wiskott-Aldrich syndrome protein - Homo sapiens (Human)| Length = 505 Score = 29.3 bits (64), Expect = 7.6 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 238 PSSGTGRPIPDTALAP-ISDPKPVESRRCAAVPERRRPPVSPHEHLPPAL 384 P+ G G P P + AP + P P SR AVP PP + PPAL Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPP--PPPNRMYPPPPPAL 350
>Q95107:WASL_BOVIN Neural Wiskott-Aldrich syndrome protein - Bos taurus (Bovine)| Length = 505 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = +1 Query: 238 PSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPPAL 384 P+ G G P P + AP + P P R P PP P+ PP L Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPPPSR----PGVGAPPPPPNRMYPPPL 347
>Q767L8:MDC1_PIG Mediator of DNA damage checkpoint protein 1 - Sus scrofa (Pig)| Length = 2042 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +1 Query: 259 PIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPP 378 P P A AP+ +P P +S + A R PP P E P Sbjct: 1034 PEPPEASAPLQNPLPSQSPKHPAPQSRLSPPPPPLEQSTP 1073
>Q9PW56:BNP2_BOTJA Bradykinin-potentiating and C-type natriuretic peptides precursor -| Bothrops jararaca (Jararaca) Length = 265 Score = 29.3 bits (64), Expect = 7.6 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 304 QVWG--QRWAPRLYPGSAVPSPTTARSDSVIRAAMAWLLLASRSPAVAPVIGRQGKDA 137 Q W Q+WAP L P + S TTA + + A AS P+ +GR G A Sbjct: 121 QKWAPVQKWAPLLQPHESPASGTTALREELSLGPEA----ASGVPSAGAEVGRSGSKA 174
>Q6LEM5:BNP1_BOTJA Bradykinin-potentiating and C-type natriuretic peptides precursor -| Bothrops jararaca (Jararaca) Length = 256 Score = 29.3 bits (64), Expect = 7.6 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 304 QVWG--QRWAPRLYPGSAVPSPTTARSDSVIRAAMAWLLLASRSPAVAPVIGRQGKDA 137 Q W Q+WAP L P + S TTA + + A AS P+ +GR G A Sbjct: 117 QKWAPLQKWAPLLQPHESPASGTTALREELSLGPEA----ASGVPSAGAEVGRSGSKA 170
>Q6A5L3:3MGH_PROAC Putative 3-methyladenine DNA glycosylase - Propionibacterium acnes| Length = 191 Score = 28.9 bits (63), Expect = 9.7 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 20/71 (28%) Frame = -3 Query: 377 GGRCSCGETGGRRRSGTAAQRRDSTG---LGSEMGAK--------------AVSGIG--- 258 GG+ G RRR G A+ R + G +GS +GA A+S +G Sbjct: 92 GGQVIAGHDDARRRRGNVAENRLACGPGNMGSALGASLEESGNPVSIIGNGAISALGWRL 151 Query: 257 RPVPDDGEVRQ 225 P P+ E RQ Sbjct: 152 EPAPEIAEFRQ 162
>Q49AM3:TTC31_HUMAN Tetratricopeptide repeat protein 31 - Homo sapiens (Human)| Length = 519 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = +1 Query: 211 QPG*RCRTSPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLP 375 Q G C S G +P+P LAP P S RC R P +SP H P Sbjct: 424 QRGGICAPPLSPGALQPLPHAELAPSGLP----SLRCPRSTALRSPGLSPLLHYP 474
>P22211:NPR1_YEAST Nitrogen permease reactivator protein - Saccharomyces cerevisiae| (Baker's yeast) Length = 790 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 11/59 (18%) Frame = +1 Query: 238 PSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRP-----------PVSPHEHLPPA 381 PS P PI PKP+ +R+ + R+P P S H+HLPP+ Sbjct: 291 PSPNIKNPNVTNGSTPI--PKPIRARQSSIYSASRQPTGSYTDNFYGSPSSVHDHLPPS 347
>Q96L34:MARK4_HUMAN MAP/microtubule affinity-regulating kinase 4 - Homo sapiens (Human)| Length = 752 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +1 Query: 226 CRTSPSSGTGRPIPDTALAPISDPKPVESRRCAAVPERRRPPVSPHEHLPPALEFR 393 C T+ S G P ++ +P E +PERR+ S +LPP++ R Sbjct: 459 CSTAGSGSRGLPPSSPMVSSAHNPNKAE------IPERRKDSTSTPNNLPPSMMTR 508 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 81,532,063 Number of extensions: 1862670 Number of successful extensions: 7163 Number of sequences better than 10.0: 30 Number of HSP's gapped: 7128 Number of HSP's successfully gapped: 32 Length of query: 166 Length of database: 100,686,439 Length adjustment: 105 Effective length of query: 61 Effective length of database: 71,885,464 Effective search space: 4385013304 Effective search space used: 4385013304 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)