ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45f04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071964:Os01g0763200 | 235 | 7e-62 | 2 | AK069938:Os05g0513100 | 173 | 2e-43 | 3 | Os07g0152000:Os07g0152000 | 113 | 4e-25 | 4 | AB071808:Os12g0616400 | 100 | 4e-21 | 5 | AB071806:Os03g0785800 | 100 | 4e-21 | 6 | AB071807:Os01g0755500 | 87 | 3e-17 | 7 | AK058570:Os01g0755500 | 87 | 3e-17 | 8 | AB071805:Os01g0213800 | 86 | 5e-17 | 9 | Os09g0410500:Os09g0410500 | 69 | 6e-12 | 10 | AY043215:Os03g0706500 | 64 | 3e-10 | 11 | AK107083:Os03g0706500 | 64 | 3e-10 | 12 | AK064708:Os04g0526000 | 46 | 6e-05 | 13 | AK061568:Os02g0635800 | 46 | 6e-05 | 14 | D87260:Os04g0194600 | 38 | 0.021 | 15 | AK100180:Os04g0194600 | 38 | 0.021 | 16 | AB071804:Os11g0175700 | 36 | 0.078 | 17 | Os12g0173300:Os12g0173300 | 35 | 0.10 | 18 | AK072037:Os01g0924400 | 35 | 0.10 | 19 | AK068818:Os02g0747400 | 35 | 0.10 | 20 | AK064240:Os06g0226700 | 34 | 0.23 | 21 | D87261:Os08g0544800 | 33 | 0.51 | 22 | AK119660:Os08g0544800 | 33 | 0.51 | 23 | AK102666:Os08g0544800 | 33 | 0.51 | 24 | AK060536:Os08g0544800 | 33 | 0.51 | 25 | AK105914:Os04g0105100 | 30 | 3.3 | 26 | AK071063:Os04g0105100 | 30 | 3.3 | 27 | AK065656:Os01g0742500 | 30 | 5.6 |
|---|
>AK071964:Os01g0763200 | Length = 307 Score = 235 bits (599), Expect = 7e-62 Identities = 146/285 (51%), Positives = 159/285 (55%), Gaps = 28/285 (9%) Frame = +3 Query: 273 LARKHAAAVATSRQWSSQTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQL 452 LARKH AAVATSRQWS+QTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSV TAIQL Sbjct: 25 LARKHTAAVATSRQWSAQTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVPTAIQL 84 Query: 453 YDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPH-QVDLMDHMMTSSSMPLM---- 617 YDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPP + + H S+MPLM Sbjct: 85 YDLQDRLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPQDHLCMGHHHHLPSAMPLMHHHG 144 Query: 618 --PHVDDKFCHFASTL---------------XXXXXXXXXXXXXXXXHHNMGRF---GYH 737 H DD H A+ H +GRF GYH Sbjct: 145 HHHHADDDKYHVAAAAAALAAEKEAAAAGGGGGGGGDDVDGGGGGGAAHIVGRFPAGGYH 204 Query: 738 RFM---XXXXXXXXXXXXXMPYNFTGESWNNSSVXXXXXXXXXXXXXXXXXXXXXXXXXX 908 RFM MP+++ GESWNN SV Sbjct: 205 RFMGLNNPLGMVNSAAGAAMPFHYAGESWNNGSVQDSGAGSPQVAAAAAHHTSPFPSLLS 264 Query: 909 XXXXXPRSHQLVYYSSDADQFPVDDXXXXXXXXXXARGFHDQTGS 1043 HQLV+YSS+A+QF VD+ AR FHDQTGS Sbjct: 265 LAPGP--HHQLVFYSSEAEQFTVDNLGSQGLSLSSARAFHDQTGS 307
>AK069938:Os05g0513100 | Length = 294 Score = 173 bits (439), Expect = 2e-43 Identities = 87/108 (80%), Positives = 96/108 (88%) Frame = +3 Query: 288 AAAVATSRQWSSQTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQD 467 AAAVA+SR WS+ TESRIVRVSRVFGGKDRHSKV+TVKGLRDRRVRLSV TAIQLYDLQD Sbjct: 29 AAAVASSRHWSASTESRIVRVSRVFGGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQD 88 Query: 468 RLGLNQPSKVVDWLLNAARHEIDKLPPLQFPPHQVDLMDHMMTSSSMP 611 RLGL+QPSKVVDWL+NAA+ EIDKLPPLQFPPH DL+ +S + P Sbjct: 89 RLGLSQPSKVVDWLINAAQAEIDKLPPLQFPPHDHDLVAAAASSMAPP 136
>Os07g0152000:Os07g0152000 | Length = 445 Score = 113 bits (282), Expect = 4e-25 Identities = 60/110 (54%), Positives = 73/110 (66%), Gaps = 3/110 (2%) Frame = +3 Query: 309 RQWSSQTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQP 488 +Q SRI RVSR GGKDRHSKV T KG+RDRRVRLSV TAIQ YDLQDRLG +QP Sbjct: 42 QQQQQHPASRIYRVSRASGGKDRHSKVYTAKGIRDRRVRLSVSTAIQFYDLQDRLGYDQP 101 Query: 489 SKVVDWLLNAARHEIDKLPPL---QFPPHQVDLMDHMMTSSSMPLMPHVD 629 SK ++WL+ AA IDKLP L FP + + +++ P +PH + Sbjct: 102 SKAIEWLIKAAAAAIDKLPSLDTASFPTNPAS--SAAVAAAAAPPLPHAE 149
>AB071808:Os12g0616400 | Length = 349 Score = 99.8 bits (247), Expect = 4e-21 Identities = 57/114 (50%), Positives = 72/114 (63%) Frame = +3 Query: 291 AAVATSRQWSSQTESRIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDR 470 A+ AT+ W + SR+ R + GGKDRHSKV T +GLRDRRVRLSV TAI YD+QDR Sbjct: 78 ASAATAAAWRT---SRVARAAA--GGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDR 132 Query: 471 LGLNQPSKVVDWLLNAARHEIDKLPPLQFPPHQVDLMDHMMTSSSMPLMPHVDD 632 LG++QPSK ++WL+ AA ID LP L D + ++S P P DD Sbjct: 133 LGVDQPSKAIEWLIRAAAAAIDALPSL-------DCSFALPAAASSPPPPAADD 179
>AB071806:Os03g0785800 | Length = 312 Score = 99.8 bits (247), Expect = 4e-21 Identities = 48/66 (72%), Positives = 53/66 (80%) Frame = +3 Query: 354 RVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 R GGKDRHSKV T KG+RDRRVRLSV TAIQ YDLQDRLG +QPSK ++WL+NAA I Sbjct: 3 RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLINAASPAI 62 Query: 534 DKLPPL 551 D LP L Sbjct: 63 DTLPSL 68
>AB071807:Os01g0755500 | Length = 443 Score = 87.0 bits (214), Expect = 3e-17 Identities = 44/70 (62%), Positives = 54/70 (77%) Frame = +3 Query: 336 RIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLN 515 RIVR + G KDRHSKV T +GLRDRRVRL+ TAI+ YD+QDRLG ++PSK VDWL+ Sbjct: 118 RIVRSAA--GRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMR 175 Query: 516 AARHEIDKLP 545 A+ ID+LP Sbjct: 176 NAKAAIDELP 185
>AK058570:Os01g0755500 | Length = 446 Score = 87.0 bits (214), Expect = 3e-17 Identities = 44/70 (62%), Positives = 54/70 (77%) Frame = +3 Query: 336 RIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLN 515 RIVR + G KDRHSKV T +GLRDRRVRL+ TAI+ YD+QDRLG ++PSK VDWL+ Sbjct: 121 RIVRSAA--GRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMR 178 Query: 516 AARHEIDKLP 545 A+ ID+LP Sbjct: 179 NAKAAIDELP 188
>AB071805:Os01g0213800 | Length = 458 Score = 86.3 bits (212), Expect = 5e-17 Identities = 43/68 (63%), Positives = 50/68 (73%) Frame = +3 Query: 348 VSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARH 527 + R G KDRHSKV T +G RDRRVRLS TAIQ YD+QDRLG ++PSK VDWL+ A+ Sbjct: 83 IVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKD 142 Query: 528 EIDKLPPL 551 IDKL L Sbjct: 143 AIDKLDVL 150
>Os09g0410500:Os09g0410500 | Length = 257 Score = 69.3 bits (168), Expect = 6e-12 Identities = 31/57 (54%), Positives = 43/57 (75%) Frame = +3 Query: 372 DRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKL 542 DRHSK++T +G+RDRR+RLS+ A + LQDRLG ++ SK VDWLL ++ ID+L Sbjct: 79 DRHSKIRTAQGVRDRRMRLSLDVARDFFALQDRLGFDKASKTVDWLLTQSKPAIDRL 135
>AY043215:Os03g0706500 | Length = 388 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/58 (50%), Positives = 41/58 (70%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKL 542 KDRHSK+ T G+RDRR+RLS+ A + + LQD LG ++ SK V WLLN ++ I ++ Sbjct: 116 KDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREI 173
>AK107083:Os03g0706500 | Length = 388 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/58 (50%), Positives = 41/58 (70%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEIDKL 542 KDRHSK+ T G+RDRR+RLS+ A + + LQD LG ++ SK V WLLN ++ I ++ Sbjct: 116 KDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREI 173
>AK064708:Os04g0526000 | Length = 206 Score = 46.2 bits (108), Expect = 6e-05 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = +3 Query: 363 GGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 GGKDRHSKV R RRVR+ + A +++ L LGL + ++WLL A I Sbjct: 54 GGKDRHSKVNG----RGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSI 106
>AK061568:Os02g0635800 | Length = 211 Score = 46.2 bits (108), Expect = 6e-05 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = +3 Query: 363 GGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 GGKDRHSKV R RRVR+ + A +++ L LGL + ++WLL A I Sbjct: 53 GGKDRHSKVNG----RGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSI 105
>D87260:Os04g0194600 | Length = 179 Score = 37.7 bits (86), Expect = 0.021 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = +3 Query: 336 RIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLN 515 R VR + DRHSKV R RRVR+ A +++ L LG + ++WLL Sbjct: 42 RRVRPRKSPSSSDRHSKVAG----RGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLR 97 Query: 516 AARHEI 533 A I Sbjct: 98 QAEPSI 103
>AK100180:Os04g0194600 | Length = 176 Score = 37.7 bits (86), Expect = 0.021 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = +3 Query: 336 RIVRVSRVFGGKDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLN 515 R VR + DRHSKV R RRVR+ A +++ L LG + ++WLL Sbjct: 39 RRVRPRKSPSSSDRHSKVAG----RGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLR 94 Query: 516 AARHEI 533 A I Sbjct: 95 QAEPSI 100
>AB071804:Os11g0175700 | Length = 419 Score = 35.8 bits (81), Expect = 0.078 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 KDRH+KV+ R RR+R+ A +++ L LG + ++WLL A I Sbjct: 124 KDRHTKVEG----RGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAI 174
>Os12g0173300:Os12g0173300 | Length = 506 Score = 35.4 bits (80), Expect = 0.10 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 KDRH+KV R RR+R+ A +++ L LG + ++WLL A I Sbjct: 110 KDRHTKVDG----RGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAI 160
>AK072037:Os01g0924400 | Length = 317 Score = 35.4 bits (80), Expect = 0.10 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 KDRH+KV R RR+R+ A +++ L LG + V WLL A I Sbjct: 88 KDRHTKVDG----RGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAI 138
>AK068818:Os02g0747400 | Length = 410 Score = 35.4 bits (80), Expect = 0.10 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAA 521 KDRH+KV+ R RR+R+ A +++ L LG + ++WLL A Sbjct: 74 KDRHTKVEG----RGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQA 120
>AK064240:Os06g0226700 | Length = 447 Score = 34.3 bits (77), Expect = 0.23 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAA 521 KDRH+KV R RR+R+ A +++ L LG + ++WLL A Sbjct: 120 KDRHTKVDG----RGRRIRMPAICAARVFQLTRELGHKTDGETIEWLLQQA 166
>D87261:Os08g0544800 | Length = 373 Score = 33.1 bits (74), Expect = 0.51 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 +DRH+KV+ R RR+R+ A +++ L LG + + WLL + I Sbjct: 76 RDRHTKVEG----RGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAI 126
>AK119660:Os08g0544800 | Length = 373 Score = 33.1 bits (74), Expect = 0.51 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 +DRH+KV+ R RR+R+ A +++ L LG + + WLL + I Sbjct: 76 RDRHTKVEG----RGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAI 126
>AK102666:Os08g0544800 | Length = 373 Score = 33.1 bits (74), Expect = 0.51 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 +DRH+KV+ R RR+R+ A +++ L LG + + WLL + I Sbjct: 76 RDRHTKVEG----RGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAI 126
>AK060536:Os08g0544800 | Length = 373 Score = 33.1 bits (74), Expect = 0.51 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +3 Query: 369 KDRHSKVKTVKGLRDRRVRLSVQTAIQLYDLQDRLGLNQPSKVVDWLLNAARHEI 533 +DRH+KV+ R RR+R+ A +++ L LG + + WLL + I Sbjct: 76 RDRHTKVEG----RGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAI 126
>AK105914:Os04g0105100 | Length = 459 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Frame = -3 Query: 114 SSRPA-SCGARSCSVSPASQLAVTF-CRRTLAS*LPAGS 4 +S PA SC +RS SV+P Q + +F R+T+ S LP GS Sbjct: 65 ASTPAGSCSSRSTSVAPKPQRSSSFMLRQTVKSLLPVGS 103
>AK071063:Os04g0105100 | Length = 459 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Frame = -3 Query: 114 SSRPA-SCGARSCSVSPASQLAVTF-CRRTLAS*LPAGS 4 +S PA SC +RS SV+P Q + +F R+T+ S LP GS Sbjct: 65 ASTPAGSCSSRSTSVAPKPQRSSSFMLRQTVKSLLPVGS 103
>AK065656:Os01g0742500 | Length = 506 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -1 Query: 557 ELERRQLVDLVAGRVEQPVDDLAGLVKAQPVLQVVELDRRLHGQPHAPV 411 E ERR+ V VEQ L++ V E++R L PHAP+ Sbjct: 38 EEERRRRAAAVIEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPL 86 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,816,478 Number of extensions: 665135 Number of successful extensions: 1745 Number of sequences better than 10.0: 27 Number of HSP's gapped: 1742 Number of HSP's successfully gapped: 29 Length of query: 480 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 376 Effective length of database: 11,235,591 Effective search space: 4224582216 Effective search space used: 4224582216 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
