ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf45f04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832213.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN047P02, full insert sequence Length = 1609 Score = 373 bits (188), Expect = 1e-99 Identities = 251/272 (92%) Strand = Plus / Plus Query: 294 gcggtggctacgtcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcg 353 |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 411 gcggtggcgacgtcgcggcaatggtcggcgcagacggagtcgcggatcgtgcgcgtgtcg 470 Query: 354 cgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgac 413 || || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||| Sbjct: 471 cgggtgttcggcggcaaggaccggcacagcaaggtgaagacggtgaaggggctgcgcgac 530 Query: 414 cggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctg 473 ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 531 cggcgggtgcggctgtcggtgccgacggcgatccagctgtacgacctgcaggaccggctg 590 Query: 474 ggccttaaccagcccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatc 533 || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 591 gggctcaaccagcccagcaaggtggtggactggctgctcaacgcggcgcgccacgagatc 650 Query: 534 gacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||||| |||||||||||||| Sbjct: 651 gacaagctgccgccgctgcagttcccgccgca 682 Score = 77.8 bits (39), Expect = 1e-10 Identities = 145/179 (81%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 1062 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 1121 Query: 930 tcgcatc---agctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 |||||| ||||||| | ||||| ||||| ||||| |||||| |||| || |||| Sbjct: 1122 ccgcatcatcagctggtgttctactcctccgaggccgagcagttcacagtagacaacctt 1181 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 1182 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 1240 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 921 ggctaccaccggttcatggggct 943
>ref|NM_001050868.1| Oryza sativa (japonica cultivar-group) Os01g0763200 (Os01g0763200) mRNA, complete cds Length = 1610 Score = 373 bits (188), Expect = 1e-99 Identities = 251/272 (92%) Strand = Plus / Plus Query: 294 gcggtggctacgtcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcg 353 |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 412 gcggtggcgacgtcgcggcaatggtcggcgcagacggagtcgcggatcgtgcgcgtgtcg 471 Query: 354 cgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgac 413 || || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||| Sbjct: 472 cgggtgttcggcggcaaggaccggcacagcaaggtgaagacggtgaaggggctgcgcgac 531 Query: 414 cggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctg 473 ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 532 cggcgggtgcggctgtcggtgccgacggcgatccagctgtacgacctgcaggaccggctg 591 Query: 474 ggccttaaccagcccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatc 533 || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 592 gggctcaaccagcccagcaaggtggtggactggctgctcaacgcggcgcgccacgagatc 651 Query: 534 gacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||||| |||||||||||||| Sbjct: 652 gacaagctgccgccgctgcagttcccgccgca 683 Score = 77.8 bits (39), Expect = 1e-10 Identities = 145/179 (81%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 1063 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 1122 Query: 930 tcgcatc---agctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 |||||| ||||||| | ||||| ||||| ||||| |||||| |||| || |||| Sbjct: 1123 ccgcatcatcagctggtgttctactcctccgaggccgagcagttcacagtagacaacctt 1182 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 1183 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 1241 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 922 ggctaccaccggttcatggggct 944
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 373 bits (188), Expect = 1e-99 Identities = 251/272 (92%) Strand = Plus / Minus Query: 294 gcggtggctacgtcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcg 353 |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 32101332 gcggtggcgacgtcgcggcaatggtcggcgcagacggagtcgcggatcgtgcgcgtgtcg 32101273 Query: 354 cgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgac 413 || || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||| Sbjct: 32101272 cgggtgttcggcggcaaggaccggcacagcaaggtgaagacggtgaaggggctgcgcgac 32101213 Query: 414 cggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctg 473 ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 32101212 cggcgggtgcggctgtcggtgccgacggcgatccagctgtacgacctgcaggaccggctg 32101153 Query: 474 ggccttaaccagcccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatc 533 || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 32101152 gggctcaaccagcccagcaaggtggtggactggctgctcaacgcggcgcgccacgagatc 32101093 Query: 534 gacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||||| |||||||||||||| Sbjct: 32101092 gacaagctgccgccgctgcagttcccgccgca 32101061 Score = 77.8 bits (39), Expect = 1e-10 Identities = 145/179 (81%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 32100681 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 32100622 Query: 930 tcgcatca---gctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 ||||||| |||||| | ||||| ||||| ||||| |||||| |||| || |||| Sbjct: 32100621 ccgcatcatcagctggtgttctactcctccgaggccgagcagttcacagtagacaacctt 32100562 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 32100561 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 32100503 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 408 cgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggac 467 |||||||| |||||||||||||| | ||| || || |||||| |||||||| |||||||| Sbjct: 6222376 cgcgaccgccgcgtgcggctgtcggcgcacaccgccatccagttctacgacgtgcaggac 6222317 Query: 468 cggctgggc 476 ||||||||| Sbjct: 6222316 cggctgggc 6222308 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 32100822 ggctaccaccggttcatggggct 32100800 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| |||||||||| || ||| ||| ||||||||||| |||||||||||| Sbjct: 31693369 tctacgacgtgcaggaccgcctcggctacgaccggcccagcaaggccgtcgactggct 31693426
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 373 bits (188), Expect = 1e-99 Identities = 251/272 (92%) Strand = Plus / Minus Query: 294 gcggtggctacgtcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcg 353 |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 143146 gcggtggcgacgtcgcggcaatggtcggcgcagacggagtcgcggatcgtgcgcgtgtcg 143087 Query: 354 cgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgac 413 || || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||| Sbjct: 143086 cgggtgttcggcggcaaggaccggcacagcaaggtgaagacggtgaaggggctgcgcgac 143027 Query: 414 cggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctg 473 ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 143026 cggcgggtgcggctgtcggtgccgacggcgatccagctgtacgacctgcaggaccggctg 142967 Query: 474 ggccttaaccagcccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatc 533 || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 142966 gggctcaaccagcccagcaaggtggtggactggctgctcaacgcggcgcgccacgagatc 142907 Query: 534 gacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||||| |||||||||||||| Sbjct: 142906 gacaagctgccgccgctgcagttcccgccgca 142875 Score = 77.8 bits (39), Expect = 1e-10 Identities = 145/179 (81%), Gaps = 6/179 (3%) Strand = Plus / Minus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 142495 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 142436 Query: 930 tcgcatca---gctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 ||||||| |||||| | ||||| ||||| ||||| |||||| |||| || |||| Sbjct: 142435 ccgcatcatcagctggtgttctactcctccgaggccgagcagttcacagtagacaacctt 142376 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 142375 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 142317 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 142636 ggctaccaccggttcatggggct 142614
>dbj|AK071964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079O19, full insert sequence Length = 1611 Score = 373 bits (188), Expect = 1e-99 Identities = 251/272 (92%) Strand = Plus / Plus Query: 294 gcggtggctacgtcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcg 353 |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 413 gcggtggcgacgtcgcggcaatggtcggcgcagacggagtcgcggatcgtgcgcgtgtcg 472 Query: 354 cgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgac 413 || || ||||||||||||||||| ||||||||||||||||| || ||||| || |||||| Sbjct: 473 cgggtgttcggcggcaaggaccggcacagcaaggtgaagacggtgaaggggctgcgcgac 532 Query: 414 cggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctg 473 ||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 533 cggcgggtgcggctgtcggtgccgacggcgatccagctgtacgacctgcaggaccggctg 592 Query: 474 ggccttaaccagcccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatc 533 || || ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 593 gggctcaaccagcccagcaaggtggtggactggctgctcaacgcggcgcgccacgagatc 652 Query: 534 gacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||||| |||||||||||||| Sbjct: 653 gacaagctgccgccgctgcagttcccgccgca 684 Score = 69.9 bits (35), Expect = 2e-08 Identities = 144/179 (80%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 1064 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 1123 Query: 930 tcgcatc---agctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 |||||| ||||||| | ||||| ||||| ||| | |||||| |||| || |||| Sbjct: 1124 ccgcatcatcagctggtgttctactcctccgaggccaagcagttcacagtagacaacctt 1183 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 1184 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 1242 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 923 ggctaccaccggttcatggggct 945
>ref|NM_001062559.1| Oryza sativa (japonica cultivar-group) Os05g0513100 (Os05g0513100) mRNA, complete cds Length = 1538 Score = 285 bits (144), Expect = 2e-73 Identities = 231/260 (88%) Strand = Plus / Plus Query: 306 tcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcgcgcgtcttcggc 365 |||||||| |||||| || ||||||||||||||| ||||| |||||| | || |||||| Sbjct: 403 tcgcggcactggtcggcgtcgacggagtcgcggatcgtgcgcgtgtcgagggtgttcggc 462 Query: 366 ggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgaccggcgcgtgcgg 425 ||||||||||| ||||||||||||| ||| || ||||| |||||||||||||| |||||| Sbjct: 463 ggcaaggaccgtcacagcaaggtgaggacggtgaaggggctccgcgaccggcgggtgcgg 522 Query: 426 ctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctgggccttaaccag 485 ||||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 523 ctgtcggtgccgacggcgatccagctctacgacctgcaggaccggctggggctcagccag 582 Query: 486 cccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatcgacaagctgccg 545 || |||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| Sbjct: 583 ccgagcaaggtggtcgactggctgatcaacgccgcccaggccgagatcgacaagcttccg 642 Query: 546 ccgctccagttcccgccgca 565 |||||||||||||||||||| Sbjct: 643 ccgctccagttcccgccgca 662
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 285 bits (144), Expect = 2e-73 Identities = 231/260 (88%) Strand = Plus / Plus Query: 306 tcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcgcgcgtcttcggc 365 |||||||| |||||| || ||||||||||||||| ||||| |||||| | || |||||| Sbjct: 99991 tcgcggcactggtcggcgtcgacggagtcgcggatcgtgcgcgtgtcgagggtgttcggc 100050 Query: 366 ggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgaccggcgcgtgcgg 425 ||||||||||| ||||||||||||| ||| || ||||| |||||||||||||| |||||| Sbjct: 100051 ggcaaggaccgtcacagcaaggtgaggacggtgaaggggctccgcgaccggcgggtgcgg 100110 Query: 426 ctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctgggccttaaccag 485 ||||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 100111 ctgtcggtgccgacggcgatccagctctacgacctgcaggaccggctggggctcagccag 100170 Query: 486 cccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatcgacaagctgccg 545 || |||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| Sbjct: 100171 ccgagcaaggtggtcgactggctgatcaacgccgcccaggccgagatcgacaagcttccg 100230 Query: 546 ccgctccagttcccgccgca 565 |||||||||||||||||||| Sbjct: 100231 ccgctccagttcccgccgca 100250
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 285 bits (144), Expect = 2e-73 Identities = 231/260 (88%) Strand = Plus / Plus Query: 306 tcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcgcgcgtcttcggc 365 |||||||| |||||| || ||||||||||||||| ||||| |||||| | || |||||| Sbjct: 25237150 tcgcggcactggtcggcgtcgacggagtcgcggatcgtgcgcgtgtcgagggtgttcggc 25237209 Query: 366 ggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgaccggcgcgtgcgg 425 ||||||||||| ||||||||||||| ||| || ||||| |||||||||||||| |||||| Sbjct: 25237210 ggcaaggaccgtcacagcaaggtgaggacggtgaaggggctccgcgaccggcgggtgcgg 25237269 Query: 426 ctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctgggccttaaccag 485 ||||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 25237270 ctgtcggtgccgacggcgatccagctctacgacctgcaggaccggctggggctcagccag 25237329 Query: 486 cccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatcgacaagctgccg 545 || |||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| Sbjct: 25237330 ccgagcaaggtggtcgactggctgatcaacgccgcccaggccgagatcgacaagcttccg 25237389 Query: 546 ccgctccagttcccgccgca 565 |||||||||||||||||||| Sbjct: 25237390 ccgctccagttcccgccgca 25237409
>dbj|AK069938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038I07, full insert sequence Length = 1539 Score = 285 bits (144), Expect = 2e-73 Identities = 231/260 (88%) Strand = Plus / Plus Query: 306 tcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcgcgcgtcttcggc 365 |||||||| |||||| || ||||||||||||||| ||||| |||||| | || |||||| Sbjct: 404 tcgcggcactggtcggcgtcgacggagtcgcggatcgtgcgcgtgtcgagggtgttcggc 463 Query: 366 ggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgaccggcgcgtgcgg 425 ||||||||||| ||||||||||||| ||| || ||||| |||||||||||||| |||||| Sbjct: 464 ggcaaggaccgtcacagcaaggtgaggacggtgaaggggctccgcgaccggcgggtgcgg 523 Query: 426 ctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctgggccttaaccag 485 ||||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 524 ctgtcggtgccgacggcgatccagctctacgacctgcaggaccggctggggctcagccag 583 Query: 486 cccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatcgacaagctgccg 545 || |||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| Sbjct: 584 ccgagcaaggtggtcgactggctgatcaacgccgcccaggccgagatcgacaagcttccg 643 Query: 546 ccgctccagttcccgccgca 565 |||||||||||||||||||| Sbjct: 644 ccgctccagttcccgccgca 663
>emb|CT832598.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN019K07, full insert sequence Length = 1534 Score = 278 bits (140), Expect = 5e-71 Identities = 230/260 (88%) Strand = Plus / Plus Query: 306 tcgcggcaatggtcgtcgcagacggagtcgcggatagtgcgggtgtcgcgcgtcttcggc 365 |||||||| |||||| || ||||||||||||||| ||||| |||||| | || |||||| Sbjct: 372 tcgcggcactggtcggcgtcgacggagtcgcggatcgtgcgcgtgtcgagggtgttcggc 431 Query: 366 ggcaaggaccgccacagcaaggtgaagaccgtcaagggtctccgcgaccggcgcgtgcgg 425 ||||||||||| ||||||||||||| ||| || ||||| |||||||||||||| |||||| Sbjct: 432 ggcaaggaccggcacagcaaggtgaggacggtgaaggggctccgcgaccggcgggtgcgg 491 Query: 426 ctgtccgtgcagacggcgatccagctctacgacctgcaggaccggctgggccttaaccag 485 ||||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 492 ctgtcggtgccgacggcgatccagctctacgacctgcaggaccggctggggctcagccag 551 Query: 486 cccagcaaggtcgtcgactggctgctcaacgcggcccgccacgagatcgacaagctgccg 545 || |||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| Sbjct: 552 ccgagcaaggtggtcgactggctgatcaacgccgcccaggccgagatcgacaagcttccg 611 Query: 546 ccgctccagttcccgccgca 565 | |||||||||||||||||| Sbjct: 612 ctgctccagttcccgccgca 631
>emb|CT832212.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN019G12, full insert sequence Length = 744 Score = 77.8 bits (39), Expect = 1e-10 Identities = 145/179 (81%), Gaps = 6/179 (3%) Strand = Plus / Plus Query: 873 gccgccgccgcggctcaccac---tcggcattcccgtcgttactctccttggctccaagg 929 ||||||||||||||||||||| ||| | ||||| || | || |||||||||||| || Sbjct: 197 gccgccgccgcggctcaccacacctcgccgttcccttcactgctttccttggctccaggg 256 Query: 930 tcgcatc---agctggtttattactcgtccgatgccgatcagttcccagttgatgacctg 986 |||||| ||||||| | ||||| ||||| ||||| |||||| |||| || |||| Sbjct: 257 ccgcatcatcagctggtgttctactcctccgaggccgagcagttcacagtagacaacctt 316 Query: 987 ggctcccaaagcttgtccttgagctcagcgaggggtttccatgaccagacaggaagcta 1045 ||||| || |||||||| ||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 317 ggctcgcagggcttgtccctgagctcggcgagagctttccatgatcagacaggaagcta 375 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 729 ggctaccaccggttcatggggct 751 ||||||||||||||||||||||| Sbjct: 56 ggctaccaccggttcatggggct 78
>dbj|AK241658.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065191F09, full insert sequence Length = 2294 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggac 467 |||||||| |||||||||||||| | ||| || || |||||| |||||||| |||||||| Sbjct: 672 cgcgaccgccgcgtgcggctgtcggcgcacaccgccatccagttctacgacgtgcaggac 731 Query: 468 cggctgggc 476 ||||||||| Sbjct: 732 cggctgggc 740
>ref|NM_001048920.1| Oryza sativa (japonica cultivar-group) Os01g0213800 (Os01g0213800) mRNA, complete cds Length = 2382 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggac 467 |||||||| |||||||||||||| | ||| || || |||||| |||||||| |||||||| Sbjct: 760 cgcgaccgccgcgtgcggctgtcggcgcacaccgccatccagttctacgacgtgcaggac 819 Query: 468 cggctgggc 476 ||||||||| Sbjct: 820 cggctgggc 828
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 408 cgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggac 467 |||||||| |||||||||||||| | ||| || || |||||| |||||||| |||||||| Sbjct: 84574 cgcgaccgccgcgtgcggctgtcggcgcacaccgccatccagttctacgacgtgcaggac 84515 Query: 468 cggctgggc 476 ||||||||| Sbjct: 84514 cggctgggc 84506
>dbj|AB071805.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF5, complete cds Length = 2442 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 408 cgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggac 467 |||||||| |||||||||||||| | ||| || || |||||| |||||||| |||||||| Sbjct: 781 cgcgaccgccgcgtgcggctgtcggcgcacaccgccatccagttctacgacgtgcaggac 840 Query: 468 cggctgggc 476 ||||||||| Sbjct: 841 cggctgggc 849
>ref|NM_001065440.1| Oryza sativa (japonica cultivar-group) Os07g0152000 (Os07g0152000) mRNA, complete cds Length = 1338 Score = 67.9 bits (34), Expect = 1e-07 Identities = 100/122 (81%) Strand = Plus / Plus Query: 345 cgggtgtcgcgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggt 404 ||||||||||| | || |||||| ||||||||||||||||||||| | || | |||||| Sbjct: 160 cgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggc 219 Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 |||||||||| ||||| || || ||||| || || |||||| |||||||||| ||| Sbjct: 220 atccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccag 279 Query: 465 ga 466 || Sbjct: 280 ga 281
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 67.9 bits (34), Expect = 1e-07 Identities = 100/122 (81%) Strand = Plus / Plus Query: 345 cgggtgtcgcgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggt 404 ||||||||||| | || |||||| ||||||||||||||||||||| | || | |||||| Sbjct: 2783755 cgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggc 2783814 Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 |||||||||| ||||| || || ||||| || || |||||| |||||||||| ||| Sbjct: 2783815 atccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccag 2783874 Query: 465 ga 466 || Sbjct: 2783875 ga 2783876 Score = 48.1 bits (24), Expect = 0.089 Identities = 27/28 (96%) Strand = Plus / Minus Query: 481 accagcccagcaaggtcgtcgactggct 508 |||||||| ||||||||||||||||||| Sbjct: 26820200 accagccccgcaaggtcgtcgactggct 26820173
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 67.9 bits (34), Expect = 1e-07 Identities = 100/122 (81%) Strand = Plus / Plus Query: 345 cgggtgtcgcgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggt 404 ||||||||||| | || |||||| ||||||||||||||||||||| | || | |||||| Sbjct: 87316 cgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggc 87375 Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 |||||||||| ||||| || || ||||| || || |||||| |||||||||| ||| Sbjct: 87376 atccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccag 87435 Query: 465 ga 466 || Sbjct: 87436 ga 87437
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 67.9 bits (34), Expect = 1e-07 Identities = 100/122 (81%) Strand = Plus / Plus Query: 345 cgggtgtcgcgcgtcttcggcggcaaggaccgccacagcaaggtgaagaccgtcaagggt 404 ||||||||||| | || |||||| ||||||||||||||||||||| | || | |||||| Sbjct: 90766 cgggtgtcgcgggcctccggcgggaaggaccgccacagcaaggtgtacacggccaagggc 90825 Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 |||||||||| ||||| || || ||||| || || |||||| |||||||||| ||| Sbjct: 90826 atccgcgaccgccgcgtccgcctctccgtctccaccgccatccagttctacgacctccag 90885 Query: 465 ga 466 || Sbjct: 90886 ga 90887
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 527 cgagatcgacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||| |||||| | |||||||||||||| Sbjct: 97461 cgagatcgacaagcttccgccgttgcagttcccgccgca 97499 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 527 cgagatcgacaagctgccgccgctccagttcccgccgca 565 ||||||||||| ||| |||||| | |||||||||||||| Sbjct: 97279 cgagatcgacaggcttccgccgttgcagttcccgccgca 97317
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 527 cgagatcgacaagctgccgccgctccagttcccgccgca 565 ||||||||||||||| |||||| | |||||||||||||| Sbjct: 32736956 cgagatcgacaagcttccgccgttgcagttcccgccgca 32736918 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Minus Query: 527 cgagatcgacaagctgccgccgctccagttcccgccgca 565 ||||||||||| ||| |||||| | |||||||||||||| Sbjct: 32737138 cgagatcgacaggcttccgccgttgcagttcccgccgca 32737100
>emb|CT831719.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA017A04, full insert sequence Length = 967 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 202 ggcggcaaggaccggcacagcaaggtgaa 230
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 20977 ggcggcaaggaccggcacagcaaggtgaa 21005
>ref|NM_001059896.1| Oryza sativa (japonica cultivar-group) Os04g0526000 (Os04g0526000) mRNA, complete cds Length = 941 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 211 ggcggcaaggaccggcacagcaaggtgaa 239
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 26284255 ggcggcaaggaccggcacagcaaggtgaa 26284283
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 60832 ggcggcaaggaccggcacagcaaggtgaa 60860
>dbj|AK064708.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B01, full insert sequence Length = 941 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 363 ggcggcaaggaccgccacagcaaggtgaa 391 |||||||||||||| |||||||||||||| Sbjct: 211 ggcggcaaggaccggcacagcaaggtgaa 239
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.089 Identities = 84/104 (80%) Strand = Plus / Plus Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 ||||||||||| || ||| ||||||| |||| |||||| ||| | |||||||| | ||| Sbjct: 26189825 ctccgcgaccgccgggtgaggctgtcggtgccgacggccatcgcgttctacgacatccag 26189884 Query: 465 gaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 ||||| || ||| | ||||||| ||||||| | |||| ||||| Sbjct: 26189885 gaccgcctcggcgtcgaccagccgagcaaggccatcgagtggct 26189928
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 48.1 bits (24), Expect = 0.089 Identities = 27/28 (96%) Strand = Plus / Minus Query: 481 accagcccagcaaggtcgtcgactggct 508 |||||||| ||||||||||||||||||| Sbjct: 66374 accagccccgcaaggtcgtcgactggct 66347
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 48.1 bits (24), Expect = 0.089 Identities = 84/104 (80%) Strand = Plus / Plus Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 ||||||||||| || ||| ||||||| |||| |||||| ||| | |||||||| | ||| Sbjct: 80063 ctccgcgaccgccgggtgaggctgtcggtgccgacggccatcgcgttctacgacatccag 80122 Query: 465 gaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 ||||| || ||| | ||||||| ||||||| | |||| ||||| Sbjct: 80123 gaccgcctcggcgtcgaccagccgagcaaggccatcgagtggct 80166
>dbj|AB071808.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF8, partial cds Length = 1403 Score = 48.1 bits (24), Expect = 0.089 Identities = 84/104 (80%) Strand = Plus / Plus Query: 405 ctccgcgaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcag 464 ||||||||||| || ||| ||||||| |||| |||||| ||| | |||||||| | ||| Sbjct: 331 ctccgcgaccgccgggtgaggctgtcggtgccgacggccatcgcgttctacgacatccag 390 Query: 465 gaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 ||||| || ||| | ||||||| ||||||| | |||| ||||| Sbjct: 391 gaccgcctcggcgtcgaccagccgagcaaggccatcgagtggct 434
>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster, strain SE50/110 Length = 41323 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 456 gacctgcaggaccggctgggcct 478 ||||||||||||||||||||||| Sbjct: 19936 gacctgcaggaccggctgggcct 19958
>ref|NM_001050819.1| Oryza sativa (japonica cultivar-group) Os01g0755500 (Os01g0755500) mRNA, partial cds Length = 1636 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| |||||||||| || ||| ||| ||||||||||| |||||||||||| Sbjct: 461 tctacgacgtgcaggaccgcctcggctacgaccggcccagcaaggccgtcgactggct 518
>gb|AC189530.1| Brassica rapa subsp. pekinensis clone KBrH001C24, complete sequence Length = 137364 Score = 44.1 bits (22), Expect = 1.4 Identities = 79/98 (80%) Strand = Plus / Plus Query: 411 gaccggcgcgtgcggctgtccgtgcagacggcgatccagctctacgacctgcaggaccgg 470 |||||||||||| |||| || | || |||||||| ||| |||||||| | |||||||| Sbjct: 53328 gaccggcgcgtgaggctatcggctcacacggcgattcagttctacgacgttcaggaccgc 53387 Query: 471 ctgggccttaaccagcccagcaaggtcgtcgactggct 508 || ||| | ||| ||| ||||| | |||||||||||| Sbjct: 53388 ctcggcttcgaccggccaagcaaagccgtcgactggct 53425
>ref|XM_001071310.1| PREDICTED: Rattus norvegicus G protein-coupled receptor 61 (predicted) (Gpr61_predicted), mRNA Length = 3416 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1271 atgctctacaaaatacaaatat 1292 |||||||||||||||||||||| Sbjct: 2896 atgctctacaaaatacaaatat 2875
>ref|XM_227581.3| PREDICTED: Rattus norvegicus G protein-coupled receptor 61 (predicted) (Gpr61_predicted), mRNA Length = 3416 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1271 atgctctacaaaatacaaatat 1292 |||||||||||||||||||||| Sbjct: 2896 atgctctacaaaatacaaatat 2875
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1357 cttacttctttccatatataaa 1378 |||||||||||||||||||||| Sbjct: 139389 cttacttctttccatatataaa 139368
>gb|DQ214139.1| Taeniopygia guttata clone 0058P0051H05 selenoprotein W variant 2-like mRNA, complete sequence Length = 896 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 cgccgctccagttcccgccgca 565 |||||||||||||||||||||| Sbjct: 108 cgccgctccagttcccgccgca 87
>gb|DQ214138.1| Taeniopygia guttata clone 0058P0014F02 selenoprotein W variant 2-like mRNA, complete sequence Length = 896 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 cgccgctccagttcccgccgca 565 |||||||||||||||||||||| Sbjct: 108 cgccgctccagttcccgccgca 87
>gb|DQ214137.1| Taeniopygia guttata clone 0058P0043F05 selenoprotein W variant 2-like mRNA, complete sequence Length = 896 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 cgccgctccagttcccgccgca 565 |||||||||||||||||||||| Sbjct: 108 cgccgctccagttcccgccgca 87
>gb|DQ214136.1| Taeniopygia guttata clone 0058P0043F07 selenoprotein W variant 2-like mRNA, complete sequence Length = 895 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 cgccgctccagttcccgccgca 565 |||||||||||||||||||||| Sbjct: 108 cgccgctccagttcccgccgca 87
>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence Length = 220976 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 702 ggagctcaccacaacatgggga 723 |||||||||||||||||||||| Sbjct: 57217 ggagctcaccacaacatgggga 57238
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 520 cccgccacgagatcgacaagctgccg 545 ||||||||||||||| |||||||||| Sbjct: 3240462 cccgccacgagatcgtcaagctgccg 3240437
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| |||||||||| || ||| ||| ||||||||||| |||||||||||| Sbjct: 107101 tctacgacgtgcaggaccgcctcggctacgaccggcccagcaaggccgtcgactggct 107158
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 86 cgcgcgccgcagctcgccggcc 107 |||||||||||||||||||||| Sbjct: 4790739 cgcgcgccgcagctcgccggcc 4790718 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cgcagctcgccggccgggagc 113 ||||||||||||||||||||| Sbjct: 4552884 cgcagctcgccggccgggagc 4552864
>dbj|AK058570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E07, full insert sequence Length = 1609 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| |||||||||| || ||| ||| ||||||||||| |||||||||||| Sbjct: 594 tctacgacgtgcaggaccgcctcggctacgaccggcccagcaaggccgtcgactggct 651
>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282, complete sequence Length = 107979 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| ||||||||||| ||||| ||| |||||||||| |||||||||||| Sbjct: 34117 tctacgacgtgcaggaccggttgggctacgaccgacccagcaaggccgtcgactggct 34174
>dbj|AB071807.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF7, partial cds Length = 1674 Score = 44.1 bits (22), Expect = 1.4 Identities = 49/58 (84%) Strand = Plus / Plus Query: 451 tctacgacctgcaggaccggctgggccttaaccagcccagcaaggtcgtcgactggct 508 |||||||| |||||||||| || ||| ||| ||||||||||| |||||||||||| Sbjct: 461 tctacgacgtgcaggaccgcctcggctacgaccggcccagcaaggccgtcgactggct 518
>gb|CP000425.1| Lactococcus lactis subsp. cremoris SK11, complete genome Length = 2438589 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1405 tgcaataataattttgatttt 1425 ||||||||||||||||||||| Sbjct: 2273154 tgcaataataattttgatttt 2273174
>dbj|AK240798.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065002G04, full insert sequence Length = 1686 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 caaggaccgccacagcaaggt 388 ||||||||||||||||||||| Sbjct: 185 caaggaccgccacagcaaggt 205
>ref|NM_001063280.1| Oryza sativa (japonica cultivar-group) Os06g0139400 (Os06g0139400) mRNA, partial cds Length = 1175 Score = 42.1 bits (21), Expect = 5.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 860 ggtctcgatcgctgccgccgccgcggctc 888 |||||||||| ||||||||||||| |||| Sbjct: 279 ggtctcgatctctgccgccgccgctgctc 251
>ref|NM_001054353.1| Oryza sativa (japonica cultivar-group) Os02g0697300 (Os02g0697300) mRNA, complete cds Length = 1623 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 24 ctcggtggagttcttgtgaag 4
>ref|XM_001212303.1| Aspergillus terreus NIH2624 cell differentiation protein rcd1 (ATEG_03125) mRNA, complete cds Length = 1176 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 869 cgctgccgccgccgcggctca 889 ||||||||||||||||||||| Sbjct: 180 cgctgccgccgccgcggctca 200
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 864 tcgatcgctgccgccgccgcg 884 ||||||||||||||||||||| Sbjct: 111390 tcgatcgctgccgccgccgcg 111370
>ref|XM_979787.1| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1489 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 869 cgctgccgccgccgcggctcaccac 893 |||||||||||||||||| |||||| Sbjct: 1431 cgctgccgccgccgcggcacaccac 1455
>ref|XM_355325.5| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1489 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 869 cgctgccgccgccgcggctcaccac 893 |||||||||||||||||| |||||| Sbjct: 1431 cgctgccgccgccgcggcacaccac 1455
>ref|XM_914950.2| PREDICTED: Mus musculus PR domain containing 12 (Prdm12), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 869 cgctgccgccgccgcggctcaccac 893 |||||||||||||||||| |||||| Sbjct: 1508 cgctgccgccgccgcggcacaccac 1532
>gb|U78771.1|LLU78771 Lactococcus lactis DNA polymerase I (polA) gene, complete cds Length = 3233 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1405 tgcaataataattttgatttt 1425 ||||||||||||||||||||| Sbjct: 2986 tgcaataataattttgatttt 2966
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 860 ggtctcgatcgctgccgccgccgcggctc 888 |||||||||| ||||||||||||| |||| Sbjct: 2073513 ggtctcgatctctgccgccgccgctgctc 2073541
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 28691570 ctcggtggagttcttgtgaag 28691550 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 caaggaccgccacagcaaggt 388 ||||||||||||||||||||| Sbjct: 35628981 caaggaccgccacagcaaggt 35628961
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11 Length = 307337 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 958 atgccgatcagttcccagttg 978 ||||||||||||||||||||| Sbjct: 183283 atgccgatcagttcccagttg 183263
>emb|AJ495787.1|OSA495787 Oryza sativa (japonica cultivar-group) mRNA for TOM1 protein Length = 1740 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 24 ctcggtggagttcttgtgaag 4
>gb|AF231764.1|AF231764 Coxsackievirus B3 strain P, complete genome Length = 7400 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1183 gcttgctagtagtgtgtgtgc 1203 ||||||||||||||||||||| Sbjct: 1311 gcttgctagtagtgtgtgtgc 1331
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1407 caataataattttgatttttt 1427 ||||||||||||||||||||| Sbjct: 321636 caataataattttgatttttt 321616
>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0666E12 Length = 47765 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 39583 ctcggtggagttcttgtgaag 39563
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 8143 ctcggtggagttcttgtgaag 8123
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 caaggaccgccacagcaaggt 388 ||||||||||||||||||||| Sbjct: 145373 caaggaccgccacagcaaggt 145353
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 42.1 bits (21), Expect = 5.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 860 ggtctcgatcgctgccgccgccgcggctc 888 |||||||||| ||||||||||||| |||| Sbjct: 94375 ggtctcgatctctgccgccgccgctgctc 94403
>dbj|AK110768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-A08, full insert sequence Length = 1175 Score = 42.1 bits (21), Expect = 5.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 860 ggtctcgatcgctgccgccgccgcggctc 888 |||||||||| ||||||||||||| |||| Sbjct: 279 ggtctcgatctctgccgccgccgctgctc 251
>dbj|AK110175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-G10, full insert sequence Length = 3756 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 aagcttgtccttgagctcagc 1015 ||||||||||||||||||||| Sbjct: 2605 aagcttgtccttgagctcagc 2585
>dbj|AK066018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D24, full insert sequence Length = 1624 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 ctcggtggagttcttgtgaag 150 ||||||||||||||||||||| Sbjct: 25 ctcggtggagttcttgtgaag 5
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 869 cgctgccgccgccgcggctcaccac 893 |||||||||||||||||| |||||| Sbjct: 203023 cgctgccgccgccgcggcacaccac 203047
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 674 caaggccggggccgacgcagacggc 698 |||||||| |||||||||||||||| Sbjct: 1777654 caaggccgaggccgacgcagacggc 1777630 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 220,965,586 Number of extensions: 12437088 Number of successful extensions: 258846 Number of sequences better than 10.0: 73 Number of HSP's gapped: 258840 Number of HSP's successfully gapped: 97 Length of query: 1442 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1419 Effective length of database: 18,503,978,556 Effective search space: 26257145570964 Effective search space used: 26257145570964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
