>P33072:LYOX_BOVIN Protein-lysine 6-oxidase precursor - Bos taurus (Bovine)|
          Length = 418
 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   GAVRSALGGMSKPVFLLDITLLSQLR-RDAHPSAYSGGHPGNDCSHWCLAGLPDTWNH 173
           GA  +    M  P+ LL     +  R R A PSA + G P     HW  AG   +  H
Sbjct: 77  GAANATAPQMRTPILLLRNNRTAAARVRTAGPSAAAAGRPRPAARHWFQAGYSTSGAH 134

>P21769:ODFP_RAT Outer dense fiber protein - Rattus norvegicus (Rat)|
          Length = 245

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 187 RSLHRLGRACPQVLASCCCSVFFHSKVN 270
           RSL RL R   ++LAS CCS      VN
Sbjct: 89  RSLERLRRTTNRILASSCCSSNILGSVN 116

>Q61999:ODFP_MOUSE Outer dense fiber protein - Mus musculus (Mouse)|
          Length = 247

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 187 RSLHRLGRACPQVLASCCCSVFFHSKVN 270
           RSL RL R   ++LAS CCS      VN
Sbjct: 89  RSLERLRRTTNRILASSCCSSNILGSVN 116

>Q8CBD1:NRIP1_MOUSE Nuclear receptor-interacting protein 1 - Mus musculus (Mouse)|
          Length = 1161

 Score = 28.1 bits (61), Expect = 9.6
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 266 TLL*K-KTEQQQLAKTCGHARPSLCKERRVEDMVPGVGQAG 147
           TLL K KT+ Q+   T     P+L ++  VE   P VGQ+G
Sbjct: 187 TLLKKSKTKDQKSGPTLPDVTPNLIRDSFVESSHPAVGQSG 227


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 62,103,836
Number of extensions: 1258082
Number of successful extensions: 2839
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2839
Number of HSP's successfully gapped: 4
Length of query: 134
Length of database: 100,686,439
Length adjustment: 100
Effective length of query: 34
Effective length of database: 73,256,939
Effective search space: 2490735926
Effective search space used: 2490735926
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)