>LOC_Os03g50440:12003.t04385:unspliced-genomic ubiquitin-conjugating enzyme E2 variant 1, putative, expressed|
Length = 5355
Score = 105 bits (224), Expect(5) = 8e-83
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +3 / +1
Query: 291 TVHEGRIYQLKLFCDTDYPDKPPTVRFQARVNMTCVNQETGMV 419
TVHEGRIYQLKLFCDTDYPD+PPTVRFQ R+NM+CVNQETGMV
Sbjct: 4210 TVHEGRIYQLKLFCDTDYPDRPPTVRFQTRINMSCVNQETGMV 4338
Score = 104 bits (221), Expect(5) = 8e-83
Identities = 41/47 (87%), Positives = 41/47 (87%)
Frame = +3 / +2
Query: 150 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPN 290
VPRNFR RGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPN
Sbjct: 3977 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPN 4117
Score = 99.1 bits (210), Expect(5) = 8e-83
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +3 / +2
Query: 417 VDPRRFPMLGNWQREHTMEDILISLKKEMSTPQNRRLHQPHEGN 548
V+P FPMLGNWQREHTM+DILI LKKEMS PQNRRLHQPH+GN
Sbjct: 4421 VEPSLFPMLGNWQREHTMQDILIGLKKEMSAPQNRRLHQPHDGN 4552
Score = 59.7 bits (124), Expect(5) = 8e-83
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3 / +3
Query: 543 GNDDQRVEQKGLAARCVVM*DTRIAMYSVTLSSIRMQKPRKP 668
GN+DQRVEQKGL+ RCV+M*+ RIAMYS+ S +K P
Sbjct: 4869 GNEDQRVEQKGLSLRCVIM*EMRIAMYSIIKLSSIRRKKENP 4994
Score = 30.4 bits (60), Expect(5) = 8e-83
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 93 KLELEERLAMGSEGSAPVVV 152
+L EE LAMGSEGSA VVV
Sbjct: 258 ELAEEEVLAMGSEGSAGVVV 317
Score = 85.4 bits (180), Expect(5) = 2e-51
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -1 / -1
Query: 416 HSSFLIHACHIDPGLEPDSRWFVWIICITEQLQLIDSSLMNSI 288
HSSFLIH HID LE +SRW VWI+CITEQLQLIDSSLMNS+
Sbjct: 4335 HSSFLIHT*HIDSSLESNSRWSVWIVCITEQLQLIDSSLMNSL 4207
Score = 74.8 bits (157), Expect(5) = 2e-51
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -1 / -3
Query: 548 VAFMGLVEPAVLRG*HLLFKADEDVLHCMFPLPVSKHRESSWINHSS 408
+ MGL+EP +LR HLLF AD+DVLHCMF LPV+KH E +W N S
Sbjct: 4552 ITIMGLMEPTILRSRHLLF*ADQDVLHCMFSLPVTKHGE*TWFNLES 4412
Score = 58.8 bits (122), Expect(5) = 2e-51
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -1 / -3
Query: 278 NNSSCPGAHIYVXXXXXXXXXXXITNAFLTSLKFFQKSKVSGN 150
N+SSCPG HIYV ITNA LTSLK F++SKVSGN
Sbjct: 4105 NDSSCPGTHIYVISIIHSIAHCPITNALLTSLKLFKQSKVSGN 3977
Score = 48.7 bits (100), Expect(5) = 2e-51
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -1 / -2
Query: 629 NTVHCNARILHNDTSSC*PFLLHSLIIVA 543
NTVHCN+ +LH+DT *PFL +SLI +A
Sbjct: 4955 NTVHCNSHLLHDDTPKR*PFLFYSLIFIA 4869
Score = 24.9 bits (48), Expect(5) = 2e-51
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 151 TTTGADPSEPMA 116
TTT ADPS+P+A
Sbjct: 316 TTTPADPSDPIA 281
Score = 81.7 bits (172), Expect(4) = 5e-44
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -2 / -2
Query: 418 TIPVS*FTHVILTLAWNRTVGGLSG*SVSQNSFN**IRPS*TV 290
TIPVS*FTH IL WNRTVGGLSG*SVSQN+FN**IRPS*TV
Sbjct: 4337 TIPVS*FTHDILIRVWNRTVGGLSG*SVSQNNFN**IRPS*TV 4209
Score = 62.9 bits (131), Expect(4) = 5e-44
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -2 / -1
Query: 520 RF*GVDISFLRLMRMSSIVCSLCQFPSIGNLLGST 416
RF*G DISF + +RMS IVCSLCQ PS+GN LGST
Sbjct: 4524 RF*GADISFFKPIRMSCIVCSLCQLPSMGNRLGST 4420
Score = 57.4 bits (119), Expect(4) = 5e-44
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -2 / -1
Query: 289 LGGPIIVPVQERIYMSSASSIP*LTV 212
LGGP+IVPVQERIYMSSASSIP*LTV
Sbjct: 4116 LGGPMIVPVQERIYMSSASSIP*LTV 4039
Score = 45.1 bits (92), Expect(4) = 5e-44
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2 / -3
Query: 667 GFLGFCILMLLSVTLYIAMRVSYITTHLAASPFC 566
GF +++L + LYIA+R+SY+ THL+ SPFC
Sbjct: 4993 GFSFLRLMLLNLIILYIAIRISYMMTHLSDSPFC 4892
Score = 79.0 bits (166), Expect(4) = 5e-43
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +2 / +1
Query: 152 SQKL*TFGRT*ER*ERHW*WNCELWDG*C**HIYALLDRNYYW 280
SQKL*T R * R*E HW*W+ ELW+G*C**HIYA LDRNY+W
Sbjct: 3979 SQKL*TA*RA*AR*EGHW*WDSELWNG*C**HIYAFLDRNYHW 4107
Score = 78.0 bits (164), Expect(4) = 5e-43
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +2 / +3
Query: 293 CS*GTNLSIEAVL*YRLSRQTTDCPVPGQGQYDMRESRNWNG 418
CS*GTNLS+E VL*YRLSRQTT C +P QY M ESRNWNG
Sbjct: 4212 CS*GTNLSVEVVL*YRLSRQTTYCSIPDSNQYVMCESRNWNG 4337
Score = 50.1 bits (103), Expect(4) = 5e-43
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +1 / +3
Query: 409 LEWLIQEDSRCLETGKGNIQWRTSSSALKRRCQPLRTAGSTSPMKATMI 555
L L Q S CL TGK NIQ +TS SA KRRC LR GS +PM I
Sbjct: 4413 LSRLNQVYSPCLVTGKENIQCKTS*SA*KRRCLLLRIVGSINPMMVISI 4559
Score = 36.3 bits (73), Expect(4) = 5e-43
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 538 MKATMIREWSRKG*QLDVSLCKIRALQCTVL 630
++A I+E +RKG +L VS CK LQCTVL
Sbjct: 4864 LQAMKIKE*NRKGYRLGVSSCKRCELQCTVL 4956
Score = 75.8 bits (159), Expect(3) = 1e-35
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = +1 / +3
Query: 151 FPETLDFWKNLREVRKALVMEL*AMGWMMLMTYICAPGQELLL 279
FPETLD K+L EVR+ALVM *AM WMMLMTYIC PGQEL L
Sbjct: 3978 FPETLDCLKSLSEVRRALVMGQ*AMEWMMLMTYICVPGQELSL 4106
Score = 68.4 bits (143), Expect(3) = 1e-35
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 292 LFMRDESIN*SCSVIQIIQTNHRLSGSRPGSI*HA*IKKLEW 417
LFMRDESI+*SCSVIQ IQT+H L SR SI H *IKKLEW
Sbjct: 4211 LFMRDESIS*SCSVIQTIQTDHLLFDSRLESICHV*IKKLEW 4336
Score = 44.1 bits (90), Expect(3) = 1e-35
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 416 G*SKKIPDAWKLAKGTYNGGHPHQP*KGDV 505
G*+K IP AW LAK TYN HP + KGDV
Sbjct: 4420 G*TKSIPHAW*LAKRTYNARHPDRLKKGDV 4509
Score = 73.5 bits (154), Expect(4) = 1e-31
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -3 / -3
Query: 417 PFQFLDSRMSY*PWPGTGQSVVCLDNLYHRTASIDRFVPHEQ 292
PFQFLDS M+Y* G Q VVCLD+LYHRT S DRFVPHEQ
Sbjct: 4336 PFQFLDSHMTY*FESGIEQ*VVCLDSLYHRTTSTDRFVPHEQ 4211
Score = 49.2 bits (101), Expect(4) = 1e-31
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = -3 / -2
Query: 540 HGAGGACGSEGLTSPF*G**GCPPLYVPFASFQASGIFLDQP 415
HG GA SE TSPF GC LYV FAS+QA GI L QP
Sbjct: 4544 HGVDGAYDSEEQTSPFLSRSGCLALYVLFASYQAWGIDLVQP 4419
Score = 47.8 bits (98), Expect(4) = 1e-31
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = -3 / -2
Query: 279 Q**FLSRSAYICXXXXXXXXXXXXXQCLSHLSQVLPKV*SFWE 151
Q**FLSR+AYIC QC SHL+Q L V*SFWE
Sbjct: 4106 Q**FLSRNAYICHQHHPFHSSLSHHQCPSHLAQALQAV*SFWE 3978
Score = 34.1 bits (68), Expect(4) = 1e-31
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3 / -1
Query: 630 *HCTLQCAYLT*RHI*LLALSAPLSDHRCL 541
*+CTLQ A LT* H * +ALS L D CL
Sbjct: 4956 *YCTLQFASLT**HT*AIALSVLLFDLHCL 4867
>LOC_Os09g12570:12009.t01046:unspliced-genomic ubiquitin-conjugating enzyme spm2, putative, expressed|
Length = 3073
Score = 100 bits (212), Expect(3) = 1e-56
Identities = 40/47 (85%), Positives = 40/47 (85%)
Frame = +3 / +3
Query: 150 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPN 290
VPRNFR RGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGP N
Sbjct: 1803 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPHN 1943
Score = 91.8 bits (194), Expect(3) = 1e-56
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3 / +2
Query: 291 TVHEGRIYQLKLFCDTDYPDKPPTVRFQARVNMTCVNQETGMV 419
+VHEGRIYQLKLFCD DYP+KPP+VRF +R+NM+CVN ETG V
Sbjct: 2354 SVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMSCVNHETGAV 2482
Score = 74.8 bits (157), Expect(3) = 1e-56
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +3 / +3
Query: 417 VDPRRFPMLGNWQREHTMEDILISLKKEMSTPQNRRLHQPHEG 545
VD R+F +L NWQRE+TME IL LKKEM+TPQNR+L QP EG
Sbjct: 2574 VDSRKFGVLANWQREYTMETILTQLKKEMATPQNRKLVQPPEG 2702
Score = 57.9 bits (120), Expect(3) = 3e-19
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -2 / -2
Query: 421 STIPVS*FTHVILTLAWNRTVGGLSG*SVSQNSFN**IRPS*TV 290
+T PVS* TH IL L NRT GG SG*S+SQNSF+ *+RPS T+
Sbjct: 2484 NTAPVS*LTHDILILE*NRTDGGFSG*SLSQNSFSW*MRPSWTL 2353
Score = 44.1 bits (90), Expect(3) = 3e-19
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = -2 / -1
Query: 289 LGGPIIVPVQERIYMSSASSIP*LTV 212
L GP++VPVQ+R+ MSSASSIP*LTV
Sbjct: 1942 LCGPMMVPVQDRM*MSSASSIP*LTV 1865
Score = 38.2 bits (77), Expect(3) = 3e-19
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2 / -1
Query: 520 RF*GVDISFLRLMRMSSIVCSLCQFPSIGNLLGSTIPVS 404
RF GV ISFL +R+ S+V S CQF N L ST ++
Sbjct: 2677 RFCGVAISFLSWVRIVSMVYSRCQFARTPNFLESTYRIT 2561
Score = 57.0 bits (118), Expect(3) = 4e-12
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2 / +2
Query: 152 SQKL*TFGRT*ER*ERHW*WNCELWDG*C**HIYALLDRNYYWST 286
S KL R * *+ HW WN ELW+G*C *H++A+LD +++WST
Sbjct: 1805 SAKLQVARRA*TW*KGHWRWNRELWNG*CR*HLHAVLDWHHHWST 1939
Score = 30.4 bits (60), Expect(3) = 4e-12
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1 / +3
Query: 298 MRDESIN*SCSVIQIIQTNHRLSGSRPGSI*HA*IKKLE 414
M+ S +*SCSV + Q +H LSG SI I +LE
Sbjct: 2361 MKVASTS*SCSVTRTTQRSHHLSGFIQESICRVLIMRLE 2477
Score = 28.1 bits (55), Expect(3) = 4e-12
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1 / +1
Query: 445 ETGKGNIQWRTSSSALKRRCQPLRTA 522
+TG + WR S + +RR QP R A
Sbjct: 2602 QTGSASTPWRLSLPSSRRRWQPRRIA 2679
Score = 56.1 bits (116), Expect(2) = 4e-10
Identities = 18/42 (42%), Positives = 32/42 (76%)
Frame = -1 / -1
Query: 413 SSFLIHACHIDPGLEPDSRWFVWIICITEQLQLIDSSLMNSI 288
SS +I+ HID ++PD W +W++ +TEQLQL+D++ M+++
Sbjct: 2476 SSLMINTRHIDS*MKPDRWWLLWVVLVTEQLQLVDATFMDTL 2351
Score = 32.7 bits (65), Expect(2) = 4e-10
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1 / -3
Query: 542 FMGLVEPAVLRG*HLLFKADEDVLHCMFPLPV 447
F L + A+LRG HLL + +D LH + LPV
Sbjct: 2699 FWRLHQLAILRGCHLLLELGKDSLHGVLALPV 2604
Score = 43.2 bits (88), Expect = 0.002
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = +1 / +1
Query: 151 FPETLDFWKNLREVRKALVMEL*AMGWMMLMTYICAPGQELLLVH 285
F ET K+L V++AL ME *AM WMM MT C G LVH
Sbjct: 1804 FRETSGC*KSLNVVKRALEMEP*AMEWMMQMTSTCGLGLAPSLVH 1938
Score = 39.6 bits (80), Expect = 0.028
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2 / +1
Query: 257 LLDRNYYWSTQYCS*GTNLSIEAVL*YRLSRQTTDCPVPGQGQYDMRESRNWNG 418
LL ++ + C * ++L EAVL* L R+ T CPV + QY + S +W+G
Sbjct: 2320 LLSVCFFLNLAECP*RSHLPAEAVL*QGLPREATICPVSFKNQYVVC*S*DWSG 2481
>LOC_Os12g41220:12012.t03799:unspliced-genomic ubiquitin-conjugating enzyme spm2, putative, expressed|
Length = 2285
Score = 98.7 bits (209), Expect(3) = 9e-55
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 144 VVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDIYMRSWTGTIIGPPN 290
+ VPRNFR RGEKGIGDG+VSYGMDDADDIYMRSWTGTIIGP N
Sbjct: 1323 ISVPRNFRLLEELERGEKGIGDGSVSYGMDDADDIYMRSWTGTIIGPHN 1469
Score = 95.9 bits (203), Expect(3) = 9e-55
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +3 / +3
Query: 291 TVHEGRIYQLKLFCDTDYPDKPPTVRFQARVNMTCVNQETGMVDPRRF 434
TVHEGRIYQLKLFCD DYPD+PPTV+F +R+NMTCVN E G+V +F
Sbjct: 1593 TVHEGRIYQLKLFCDKDYPDRPPTVKFHSRINMTCVNPENGLV*HEKF 1736
Score = 65.2 bits (136), Expect(3) = 9e-55
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3 / +1
Query: 417 VDPRRFPMLGNWQREHTMEDILISLKKEMSTPQNRRLHQPHEG 545
VD R+F +L NW+RE+TME IL LKKEM+ NR+L QP EG
Sbjct: 1810 VDQRKFSLLSNWRREYTMEAILTQLKKEMAASHNRKLVQPPEG 1938
Score = 51.9 bits (107), Expect(3) = 2e-14
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -2 / -2
Query: 418 TIPVS*FTHVILTLAWNRTVGGLSG*SVSQNSFN**IRPS*TV 290
T P S FT V+L L N TVGGLSG*S+SQ SF+ IRPS TV
Sbjct: 1720 TNPFSGFTQVMLILE*NFTVGGLSG*SLSQKSFSWYIRPSWTV 1592
Score = 45.1 bits (92), Expect(3) = 2e-14
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = -2 / -2
Query: 289 LGGPIIVPVQERIYMSSASSIP*LT 215
L GPIIVPVQER+ +SSASSIP*LT
Sbjct: 1468 LWGPIIVPVQERM*ISSASSIP*LT 1394
Score = 25.8 bits (50), Expect(3) = 2e-14
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2 / -1
Query: 502 ISFLRLMRMSSIVCSLCQFPSIGNLLGST 416
ISFL ++++SIV S QF + N L ST
Sbjct: 1895 ISFLSWVKIASIVYSRRQFDNRLNFLWST 1809
Score = 51.0 bits (105), Expect(3) = 1e-11
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +2
Query: 158 KL*TFGRT*ER*ERHW*WNCELWDG*C**HIYALLDRNYYWS 283
+L T R *ER E H *W +LW+G*C +++ALLDR+ YWS
Sbjct: 1337 ELQTARRA*ERGEGHR*WISKLWNG*CRRYLHALLDRHNYWS 1462
Score = 40.0 bits (81), Expect(3) = 1e-11
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2 / +2
Query: 293 CS*GTNLSIEAVL*YRLSRQTTDCPVPGQGQYDMRESRNWNG*SKKI 433
C *G ++ EA L L RQ T+C + + Q+D+ + R W G +++I
Sbjct: 1595 CP*GPDIPTEAFLRQGLPRQATNCKISLKNQHDLCKPREWIGMTREI 1735
Score = 22.1 bits (42), Expect(3) = 1e-11
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 416 G*SKKIPDAWKLAKGTYNGGH 478
G* K++ KLA +NGG+
Sbjct: 1809 G*PKEVQPVVKLAPRVHNGGY 1871
Score = 37.3 bits (75), Expect(2) = 2e-05
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = -1 / -1
Query: 401 IHACHIDPGLEPDSRWFVWIICITEQLQLIDSSLMNSI 288
++ H+D ++ S W VW++ + E+LQL+ +LM+S+
Sbjct: 1703 VYTGHVDS*VKFYSWWPVWVVLVAEKLQLVYPALMDSL 1590
Score = 34.5 bits (69), Expect(2) = 2e-05
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1 / -1
Query: 281 TNNSSCPGAHIYVXXXXXXXXXXXITNAFLTSLKFFQKSKV 159
TNN +CP AH+ + IT+A L SLK F +S+V
Sbjct: 1460 TNNCACPRAHVDIVCIIHSIAY*SITDALLPSLKLF*QSEV 1338
Score = 44.1 bits (90), Expect(2) = 1e-04
Identities = 23/41 (56%), Positives = 26/41 (63%)
Frame = +1 / +1
Query: 160 TLDFWKNLREVRKALVMEL*AMGWMMLMTYICAPGQELLLV 282
T D K+LRE R+A VM+ *AM WMM CA GQ LLV
Sbjct: 1339 TSDC*KSLREGRRASVMDQ*AMEWMMQTISTCALGQAQLLV 1461
Score = 25.4 bits (49), Expect(2) = 1e-04
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1 / +1
Query: 292 LFMRDESIN*SCSVIQIIQTNHRLSGSRPGSI*HA*IKKLEW 417
L MR N*S S + QT H+L S * * ++++W
Sbjct: 1594 LSMRAGYTN*SFSATRTTQTGHQL*NFTQEST*PV*TQRMDW 1719
>LOC_Os04g58800:12004.t05341:unspliced-genomic ubiquitin-conjugating enzyme spm2, putative, expressed|
Length = 2128
Score = 98.7 bits (209), Expect(4) = 4e-53
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +3 / +2
Query: 273 IIGPPNTVHEGRIYQLKLFCDTDYPDKPPTVRFQARVNMTCVNQETGMVDPRRFPML 443
++G +VHEGRIYQLKLFCD DYPDKPPTVRF +R+NM CVN +TG+V + P L
Sbjct: 512 LVGWLQSVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMPCVNPDTGLVRMLKIPSL 682
Score = 67.5 bits (141), Expect(4) = 4e-53
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +3 / +3
Query: 417 VDPRRFPMLGNWQREHTMEDILISLKKEMSTPQNRRLHQPHEG 545
V+ ++F ML NWQRE+TME+IL LKKEM+ P +R+L QP EG
Sbjct: 1632 VESKKFHMLANWQREYTMENILTQLKKEMAAPHSRKLVQPPEG 1760
Score = 60.6 bits (126), Expect(4) = 4e-53
Identities = 25/33 (75%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 147 VVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADD 245
VVPRNFR RGEKGIGDGTVSYGMDD D
Sbjct: 215 VVPRNFRLLEELERGEKGIGDGTVSYGMDDDGD 313
Score = 46.9 bits (96), Expect(4) = 4e-53
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 231 DDADDIYMRSWTGTIIGPPN 290
DD DDI+MRSWTGTIIGP N
Sbjct: 302 DDGDDIFMRSWTGTIIGPLN 361
Score = 56.1 bits (116), Expect(3) = 2e-16
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -2 / -2
Query: 418 TIPVS*FTHVILTLAWNRTVGGLSG*SVSQNSFN**IRPS*TVLGGP 278
T PVS T +L L W RTVGGLSG*S+SQ SF+ *+RPS T P
Sbjct: 657 TSPVSGLTQGMLILEWKRTVGGLSG*SLSQKSFSW*MRPSCTDCNQP 517
Score = 38.2 bits (77), Expect(3) = 2e-16
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -2 / -1
Query: 520 RF*GVDISFLRLMRMSSIVCSLCQFPSIGNLLGST 416
R G ISF +R+ S+V SLCQF SI N L ST
Sbjct: 1735 RLCGAAISFFSCVRIFSMVYSLCQFASIWNFLLST 1631
Score = 35.4 bits (71), Expect(3) = 2e-16
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / -2
Query: 289 LGGPIIVPVQERIYMSSASS 230
L GP+IVPVQER+ MSS SS
Sbjct: 360 LSGPMIVPVQERMKMSSPSS 301
Score = 46.4 bits (95), Expect(2) = 6e-09
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = -1 / -1
Query: 419 NHSSFLIHACHIDPGLEPDSRWFVWIICITEQLQLIDSSLMNSIGWTNNSS 267
N S + A H+DPG+E V ++ + E+LQL+D+ L++ + TN S+
Sbjct: 658 NQSGVRVDAGHVDPGVEAHGGRLVGVVLVAEELQLVDAPLVHRLQPTNQST 506
Score = 37.7 bits (76), Expect(2) = 6e-09
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 542 FMGLVEPAVLRG*HLLFKADEDVLHCMFPLPVSKHRE 432
F L + A +R HLL + +D+LH + PLPV +H E
Sbjct: 1757 FWRLNQLAAVRRGHLLLQLRQDILHGVLPLPVCQHME 1647
Score = 29.5 bits (58), Expect(2) = 0.20
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 245 HIYALLDRNYYWSTQ 289
H++ALLDR+ +W+TQ
Sbjct: 316 HLHALLDRHNHWTTQ 360
Score = 28.6 bits (56), Expect(2) = 0.20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 413 NG*SKKIPDAWKLAKGTYNGGHPHQP*KGD 502
+G +++P A KLA+G ++G +P +GD
Sbjct: 1628 SGRKQEVPYAGKLAEGVHHGEYPDAAEEGD 1717
>LOC_Os01g21380:12001.t01875:unspliced-genomic sarcosine oxidase, putative, expressed|
Length = 1375
Score = 29.9 bits (59), Expect(3) = 0.12
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1 / +2
Query: 478 SSSALKRRCQPLRTAGSTSPMKATMIREWSRKG*QLDVSLCKIRALQCTVLH*VASECRS 657
++SA RR R + +T+ T R WS + * + RA + A+ R
Sbjct: 749 AASASSRRRPASRRSPATATRTCTARRRWSSRA*SRSTTTAARRATRTAGTGPAAAATRP 928
Query: 658 RGNPGGN 678
+PGG+
Sbjct: 929 PASPGGS 949
Score = 24.4 bits (47), Expect(3) = 0.12
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2 / +1
Query: 410 WNG*SKKIPDAWKLAKGTYNGG 475
W G + +PD W A GG
Sbjct: 409 WGGAFRGVPDGWVAAVSELGGG 474
Score = 21.7 bits (41), Expect(3) = 0.12
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 36 LAAQPPRNPSSAARGRKRPKLELEERL 116
LAA+ R A GR RP+ E+ R+
Sbjct: 342 LAARRRRELRRAPGGRGRPRREVGRRV 422
>LOC_Os01g62244:12001.t05600:unspliced-genomic ubiquitin-conjugating enzyme E2 7, putative, expressed|
Length = 6265
Score = 27.2 bits (53), Expect(2) = 9.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 240 DDIYMRSWTGTIIGPPNTV 296
DD + W TIIGPP+T+
Sbjct: 458 DDSNVFEWQVTIIGPPDTL 514
Score = 26.3 bits (51), Expect(2) = 9.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 339 DYPDKPPTVRFQARV 383
+YP+ PPTVRF + +
Sbjct: 4166 NYPNSPPTVRFTSEM 4210
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 299,129,687
Number of extensions: 4511411
Number of successful extensions: 21706
Number of sequences better than 10.0: 48
Length of query: 266
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 217
Effective length of database: 52,856,264
Effective search space: 11469809288
Effective search space used: 11469809288
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)