Clone Information

BLAST Search Result

Clone Name	FLbaf45e14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001057598.1\| Oryza sativa (japonica cultivar-group) Os03g...	450	e-123
2	dbj\|AK120951.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	450	e-123
3	gb\|DQ246086.1\| Zea mays clone 15047 mRNA sequence	359	1e-95
4	gb\|AY107839.1\| Zea mays PCO143146 mRNA sequence	327	4e-86
5	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
6	gb\|AC082645.13\|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033...	172	1e-39
7	gb\|DQ642432.1\| Zea mays RFLP probe umc107 (CBM 1.10) genomic seq...	167	8e-38
8	ref\|NM_129165.2\| Arabidopsis thaliana ubiquitin conjugating enzy...	147	7e-32
9	gb\|AY093382.1\| Arabidopsis thaliana putative ubiquitin-conjugati...	147	7e-32
10	gb\|AY062760.1\| Arabidopsis thaliana putative ubiquitin-conjugati...	147	7e-32
11	gb\|AY089084.1\| Arabidopsis thaliana clone 29951 mRNA, complete s...	147	7e-32
12	gb\|AY085609.1\| Arabidopsis thaliana clone 16125 mRNA, complete s...	139	2e-29
13	gb\|DQ244159.1\| Zea mays clone 2642 mRNA sequence	127	7e-26
14	gb\|BT017181.1\| Zea mays clone EL01N0369E04.c mRNA sequence	127	7e-26
15	ref\|NM_179928.1\| Arabidopsis thaliana ubiquitin conjugating enzy...	125	3e-25
16	ref\|NM_115116.3\| Arabidopsis thaliana ubiquitin conjugating enzy...	123	1e-24
17	gb\|AY072492.1\| Arabidopsis thaliana unknown protein mRNA, comple...	123	1e-24
18	gb\|AY042846.1\| Arabidopsis thaliana Unknown protein mRNA, comple...	123	1e-24
19	emb\|BX825709.1\|CNS0A69P Arabidopsis thaliana Full-length cDNA Co...	123	1e-24
20	ref\|NM_102175.2\| Arabidopsis thaliana ubiquitin conjugating enzy...	119	2e-23
21	gb\|AY093340.1\| Arabidopsis thaliana similar to DNA binding prote...	119	2e-23
22	gb\|AY059896.1\| Arabidopsis thaliana similar to DNA binding prote...	119	2e-23
23	gb\|AY104181.1\| Zea mays PCO060230 mRNA sequence	119	2e-23
24	gb\|AY587772.1\| Tamarix androssowii ubiquitin-conjugating enzyme ...	117	6e-23
25	gb\|DQ097727.1\| Arachis hypogaea ubiquitin-conjugating enzyme 2 m...	111	4e-21
26	ref\|NM_105734.2\| Arabidopsis thaliana ubiquitin conjugating enzy...	107	6e-20
27	gb\|AY088344.1\| Arabidopsis thaliana clone 5821 mRNA, complete se...	107	6e-20
28	gb\|BT004943.1\| Arabidopsis thaliana clone U20398 putative E2, ub...	107	6e-20
29	gb\|BT004011.1\| Arabidopsis thaliana clone RAFL14-86-C24 (R20398)...	107	6e-20
30	gb\|AC005292.4\|AC005292 Genomic sequence for Arabidopsis thaliana...	107	6e-20
31	ref\|NM_001073756.1\| Oryza sativa (japonica cultivar-group) Os12g...	103	1e-18
32	dbj\|AK068060.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	103	1e-18
33	ref\|NM_180353.1\| Arabidopsis thaliana ubiquitin conjugating enzy...	101	4e-18
34	gb\|AC011663.7\|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A...	101	4e-18
35	emb\|CT833593.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	100	1e-17
36	emb\|CT831939.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	100	1e-17
37	ref\|NM_001069339.1\| Oryza sativa (japonica cultivar-group) Os09g...	100	1e-17
38	dbj\|AK104965.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	100	1e-17
39	dbj\|AK073729.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	100	1e-17
40	gb\|AC007017.4\| Arabidopsis thaliana chromosome 2 clone F11F19 ma...	96	2e-16
41	gb\|DQ160040.1\| Taraxacum officinale TO38-23 (To38-23) mRNA, part...	94	9e-16
42	emb\|CT987735.1\| partial cDNA sequence from a Lambda ZAP II norma...	92	4e-15
43	gb\|AC150979.15\| Medicago truncatula clone mth2-115a17, complete ...	92	4e-15
44	gb\|BT013203.1\| Lycopersicon esculentum clone 134376R, mRNA sequence	92	4e-15
45	gb\|AC140035.9\| Medicago truncatula clone mth2-25n18, complete se...	92	4e-15
46	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	92	4e-15
47	emb\|AL732537.4\|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa...	92	4e-15
48	dbj\|AP004536.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	86	2e-13
49	gb\|DQ235194.1\| Solanum tuberosum clone 168B03 ubiquitin-conjugat...	84	9e-13
50	gb\|DQ191643.1\| Solanum tuberosum ubiquitin-conjugating enzyme fa...	84	9e-13
51	emb\|AL353912.1\|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA...	84	9e-13
52	emb\|AL050300.2\|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA...	84	9e-13
53	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
54	dbj\|AP004011.3\| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
55	dbj\|AP004756.2\| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
56	gb\|DQ245427.1\| Zea mays clone 15420 mRNA sequence	80	1e-11
57	gb\|BT016303.1\| Zea mays clone Contig136 mRNA sequence	80	1e-11
58	gb\|AY103581.1\| Zea mays PCO136340 mRNA sequence	80	1e-11
59	gb\|AC189492.1\| Brassica rapa subsp. pekinensis clone KBrB084M08,...	72	3e-09
60	gb\|DQ160024.1\| Taraxacum officinale TO25-123 (To25-123) mRNA, pa...	62	3e-06
61	emb\|CT986910.1\| partial cDNA sequence from a Lambda ZAP II norma...	50	0.012
62	gb\|CP000076.1\| Pseudomonas fluorescens Pf-5, complete genome	46	0.19
63	gb\|AC122214.4\| Mus musculus BAC clone RP23-104J10 from chromosom...	42	3.0

>ref|NM_001057598.1| Oryza sativa (japonica cultivar-group) Os03g0712300 (Os03g0712300)
           mRNA, complete cds
          Length = 789
 Score =  450 bits (227), Expect = e-123
 Identities = 419/483 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 gtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcatt 203
           ||||||||||||||||||||||||||  | ||||| |||||| |||||||||| ||||||
Sbjct: 120 gtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcatt 179

                                                                       
Query: 204 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctgg 263
           |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 180 ggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctgg 239

                                                                       
Query: 264 acaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaag 323
           ||||||||||| ||||| || || ||||||||||||||||||||||||||||| ||||||
Sbjct: 240 acaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaag 299

                                                                       
Query: 324 ctgttctgtgatacagattatccagacaaaccaccgactgtccggttccaggccagggtc 383
            |||||||||||||||| |||||||||| |||||| ||||| || |||||| |  |  ||
Sbjct: 300 ttgttctgtgatacagactatccagacagaccacctactgttcgattccagactcgaatc 359

                                                                       
Query: 384 aatatgacatgcgtgaatcaagaaactggaatggttgatccaagaagattcccgatgctt 443
           |||||| |||| |||||||||||||||||||||||||| |||||   |||||| ||||||
Sbjct: 360 aatatgtcatgtgtgaatcaagaaactggaatggttgaaccaagtctattccccatgctt 419

                                                                       
Query: 444 ggaaactggcaaagggaacatacaatggaggacatcctcatcagccttaaaaaggagatg 503
           || ||||||||||| |||||||||||| | |||||||| ||| || | ||||||||||||
Sbjct: 420 ggtaactggcaaagagaacatacaatgcaagacatcctgatcggcttaaaaaaggagatg 479

                                                                       
Query: 504 tcaacccctcagaaccgcaggctccaccagccccatgaaggcaacgatgatcagagagtg 563
           ||  | |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 480 tctgctcctcagaatcgtaggctccatcaaccccatgatggcaatgaagatcaaagagta 539

                                                                       
Query: 564 gagcagaaagggctagcagctagatgtgtcgttatgtaagatacgcgcattgcaatgtac 623
           || |||||||||||| |   ||| |||||| | |||||||| | ||| ||||||||||||
Sbjct: 540 gaacagaaagggctatcgcttaggtgtgtcatcatgtaagagatgcgaattgcaatgtac 599

              
Query: 624 agt 626
           |||
Sbjct: 600 agt 602

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>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full
           insert sequence
          Length = 790

 Score =  450 bits (227), Expect = e-123
 Identities = 419/483 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 gtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcatt 203
           ||||||||||||||||||||||||||  | ||||| |||||| |||||||||| ||||||
Sbjct: 121 gtcgtcgttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcatt 180

                                                                       
Query: 204 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctgg 263
           |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 181 ggtgatgggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctgg 240

                                                                       
Query: 264 acaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaag 323
           ||||||||||| ||||| || || ||||||||||||||||||||||||||||| ||||||
Sbjct: 241 acaggaactatcattggccctcctaatactgttcatgagggacgaatctatcagttgaag 300

                                                                       
Query: 324 ctgttctgtgatacagattatccagacaaaccaccgactgtccggttccaggccagggtc 383
            |||||||||||||||| |||||||||| |||||| ||||| || |||||| |  |  ||
Sbjct: 301 ttgttctgtgatacagactatccagacagaccacctactgttcgattccagactcgaatc 360

                                                                       
Query: 384 aatatgacatgcgtgaatcaagaaactggaatggttgatccaagaagattcccgatgctt 443
           |||||| |||| |||||||||||||||||||||||||| |||||   |||||| ||||||
Sbjct: 361 aatatgtcatgtgtgaatcaagaaactggaatggttgaaccaagtctattccccatgctt 420

                                                                       
Query: 444 ggaaactggcaaagggaacatacaatggaggacatcctcatcagccttaaaaaggagatg 503
           || ||||||||||| |||||||||||| | |||||||| ||| || | ||||||||||||
Sbjct: 421 ggtaactggcaaagagaacatacaatgcaagacatcctgatcggcttaaaaaaggagatg 480

                                                                       
Query: 504 tcaacccctcagaaccgcaggctccaccagccccatgaaggcaacgatgatcagagagtg 563
           ||  | |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| 
Sbjct: 481 tctgctcctcagaatcgtaggctccatcaaccccatgatggcaatgaagatcaaagagta 540

                                                                       
Query: 564 gagcagaaagggctagcagctagatgtgtcgttatgtaagatacgcgcattgcaatgtac 623
           || |||||||||||| |   ||| |||||| | |||||||| | ||| ||||||||||||
Sbjct: 541 gaacagaaagggctatcgcttaggtgtgtcatcatgtaagagatgcgaattgcaatgtac 600

              
Query: 624 agt 626
           |||
Sbjct: 601 agt 603

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>gb|DQ246086.1| Zea mays clone 15047 mRNA sequence
          Length = 907

 Score =  359 bits (181), Expect = 1e-95
 Identities = 276/307 (89%), Gaps = 3/307 (0%)
 Strand = Plus / Plus

                                                                       
Query: 115 tcgccatgggctccgagggatccgcg---ccggtcgtcgttcccagaaactttagacttt 171
           |||| ||||| |||||||||||| ||   |||||||||||||||||||||||||| ||  
Sbjct: 94  tcgcgatggggtccgagggatcctcgggtccggtcgtcgttcccagaaactttaggctgc 153

                                                                       
Query: 172 tggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatgg 231
           | |||||||| ||  | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 154 tagaagaactagaacgtggtgagaagggcattggtgatggaactgtgagctatgggatgg 213

                                                                       
Query: 232 atgatgctgatgacatatatatgcgctcctggacaggaactattattggtccacccaata 291
           ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 214 atgatgctgatgacatatatatgcggtcctggacaggaactataattggtcctcccaata 273

                                                                       
Query: 292 ctgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagaca 351
           ||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct: 274 ctgttcacgagggacgaatctaccaattaaagctgttttgtgatacagattatccagata 333

                                                                       
Query: 352 aaccaccgactgtccggttccaggccagggtcaatatgacatgcgtgaatcaagaaactg 411
           |||||||||| ||||| |||||| |  || ||||||||||||||||||| ||||||||||
Sbjct: 334 aaccaccgacagtccgattccagactcggatcaatatgacatgcgtgaaccaagaaactg 393

                  
Query: 412 gaatggt 418
           || ||||
Sbjct: 394 gattggt 400



 Score =  137 bits (69), Expect = 7e-29
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                       
Query: 438 atgcttggaaactggcaaagggaacatacaatggaggacatcctcatcagccttaaaaag 497
           |||||||| || ||| ||||||||||||||||||||||||||||   |||| | |||| |
Sbjct: 514 atgcttggcaagtgggaaagggaacatacaatggaggacatcctggccagcttaaaaagg 573

                                                                       
Query: 498 gagatgtcaacccctcagaaccgcaggctccaccagccccatgaaggcaacgatgatcag 557
           ||||||||||| |||||||||||||||||  |||| || |||||||| ||||| ||||| 
Sbjct: 574 gagatgtcaactcctcagaaccgcaggctgtaccaacctcatgaaggtaacgaagatcaa 633

                                                        
Query: 558 agagtggagcagaaagggctagcagctagatgtgtcgttatgtaa 602
           ||||| ||||||||||||||  |   |||||||||||| ||||||
Sbjct: 634 agagtagagcagaaagggctgtcccttagatgtgtcgtcatgtaa 678

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>gb|AY107839.1| Zea mays PCO143146 mRNA sequence
          Length = 1245

 Score =  327 bits (165), Expect = 4e-86
 Identities = 272/307 (88%), Gaps = 3/307 (0%)
 Strand = Plus / Plus

                                                                       
Query: 115 tcgccatgggctccgagggatccgcg---ccggtcgtcgttcccagaaactttagacttt 171
           |||||||||| |||||||||||| ||   || || |||||||||||||||||||| ||  
Sbjct: 218 tcgccatggggtccgagggatcctcgggtccagttgtcgttcccagaaactttaggctgc 277

                                                                       
Query: 172 tggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatgg 231
           | |||||||| ||  | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 tagaagaactagaacgtggtgagaagggcattggtgatggaactgtgagctatgggatgg 337

                                                                       
Query: 232 atgatgctgatgacatatatatgcgctcctggacaggaactattattggtccacccaata 291
           | |||||||||||||||| |||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 338 acgatgctgatgacatatttatgcggtcctggacaggaactatcattggtcctcccaaca 397

                                                                       
Query: 292 ctgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagaca 351
           ||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 398 ctgttcacgagggacgaatctatcagttaaagctgttttgtgatacagattatccagata 457

                                                                       
Query: 352 aaccaccgactgtccggttccaggccagggtcaatatgacatgcgtgaatcaagaaactg 411
           |||||||||||||||| |||||| |  || ||||||||||||| ||||| ||||||||||
Sbjct: 458 aaccaccgactgtccgattccagactcggatcaatatgacatgtgtgaaccaagaaactg 517

                  
Query: 412 gaatggt 418
           || ||||
Sbjct: 518 gattggt 524



 Score =  107 bits (54), Expect = 6e-20
 Identities = 117/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 438 atgcttggaaactggcaaagggaacatacaatggaggacatcctcatcagccttaaaaag 497
           ||||||||||| ||| ||||||||||||| ||||||||||| || | |||| | |||| |
Sbjct: 640 atgcttggaaagtgggaaagggaacatacgatggaggacattctgaccagcttaaaaagg 699

                                                                       
Query: 498 gagatgtcaacccctcagaaccgcaggctccaccagccccatgaaggcaacgatgatcag 557
           ||||||||||| || ||||| ||||||||  |||| || ||||||||||| || || || 
Sbjct: 700 gagatgtcaactccacagaatcgcaggctgtaccaacctcatgaaggcaatgaagaccaa 759

                             
Query: 558 agagtggagcagaaaggg 575
           ||||| ||||||||||||
Sbjct: 760 agagtagagcagaaaggg 777

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Plus

                                                                            
Query: 150      gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
                ||||||||||||||||||||  | ||||| |||||| |||||||||| ||||||||||||
Sbjct: 28581831 gttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgat 28581890

                                                                            
Query: 210      ggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctggacagga 269
                || || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 28581891 gggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctggacagga 28581950

                           
Query: 270      actattattgg 280
                ||||| |||||
Sbjct: 28581951 actatcattgg 28581961



 Score =  143 bits (72), Expect = 1e-30
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                            
Query: 291      actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
                |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 28582064 actgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagac 28582123

                                                                            
Query: 351      aaaccaccgactgtccggttccaggccagggtcaatatgacatgcgtgaatcaagaaact 410
                | |||||| ||||| || |||||| |  |  |||||||| |||| |||||||||||||||
Sbjct: 28582124 agaccacctactgttcgattccagactcgaatcaatatgtcatgtgtgaatcaagaaact 28582183

                        
Query: 411      ggaatggt 418
                ||||||||
Sbjct: 28582184 ggaatggt 28582191



 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                            
Query: 431      attcccgatgcttggaaactggcaaagggaacatacaatggaggacatcctcatcagcct 490
                |||||| |||||||| ||||||||||| |||||||||||| | |||||||| ||| || |
Sbjct: 28582289 attccccatgcttggtaactggcaaagagaacatacaatgcaagacatcctgatcggctt 28582348

                                                                   
Query: 491      taaaaaggagatgtcaacccctcagaaccgcaggctccaccagccccatga 541
                 ||||||||||||||  | |||||||| || |||||||| || ||||||||
Sbjct: 28582349 aaaaaaggagatgtctgctcctcagaatcgtaggctccatcaaccccatga 28582399



 Score = 50.1 bits (25), Expect = 0.012
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 542      aggcaacgatgatcagagagtggagcagaaagggctagcagctagatgtgtcgttatgta 601
                |||||| || ||||| ||||| || |||||||||||| |   ||| |||||| | |||||
Sbjct: 28582722 aggcaatgaagatcaaagagtagaacagaaagggctatcgcttaggtgtgtcatcatgta 28582781

                                         
Query: 602      agatacgcgcattgcaatgtacagt 626
                ||| | ||| |||||||||||||||
Sbjct: 28582782 agagatgcgaattgcaatgtacagt 28582806

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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Plus

                                                                         
Query: 150   gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
             ||||||||||||||||||||  | ||||| |||||| |||||||||| ||||||||||||
Sbjct: 84637 gttcccagaaactttagactgcttgaagagcttgagcgaggtgagaagggcattggtgat 84696

                                                                         
Query: 210   ggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctggacagga 269
             || || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 84697 gggacagtgagctatggaatggatgatgctgatgacatatatatgcgttcctggacagga 84756

                        
Query: 270   actattattgg 280
             ||||| |||||
Sbjct: 84757 actatcattgg 84767



 Score =  143 bits (72), Expect = 1e-30
 Identities = 114/128 (89%)
 Strand = Plus / Plus

                                                                         
Query: 291   actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
             |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 84870 actgttcatgagggacgaatctatcagttgaagttgttctgtgatacagactatccagac 84929

                                                                         
Query: 351   aaaccaccgactgtccggttccaggccagggtcaatatgacatgcgtgaatcaagaaact 410
             | |||||| ||||| || |||||| |  |  |||||||| |||| |||||||||||||||
Sbjct: 84930 agaccacctactgttcgattccagactcgaatcaatatgtcatgtgtgaatcaagaaact 84989

                     
Query: 411   ggaatggt 418
             ||||||||
Sbjct: 84990 ggaatggt 84997



 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                         
Query: 431   attcccgatgcttggaaactggcaaagggaacatacaatggaggacatcctcatcagcct 490
             |||||| |||||||| ||||||||||| |||||||||||| | |||||||| ||| || |
Sbjct: 85095 attccccatgcttggtaactggcaaagagaacatacaatgcaagacatcctgatcggctt 85154

                                                                
Query: 491   taaaaaggagatgtcaacccctcagaaccgcaggctccaccagccccatga 541
              ||||||||||||||  | |||||||| || |||||||| || ||||||||
Sbjct: 85155 aaaaaaggagatgtctgctcctcagaatcgtaggctccatcaaccccatga 85205



 Score = 50.1 bits (25), Expect = 0.012
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                         
Query: 542   aggcaacgatgatcagagagtggagcagaaagggctagcagctagatgtgtcgttatgta 601
             |||||| || ||||| ||||| || |||||||||||| |   ||| |||||| | |||||
Sbjct: 85528 aggcaatgaagatcaaagagtagaacagaaagggctatcgcttaggtgtgtcatcatgta 85587

                                      
Query: 602   agatacgcgcattgcaatgtacagt 626
             ||| | ||| |||||||||||||||
Sbjct: 85588 agagatgcgaattgcaatgtacagt 85612

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>gb|DQ642432.1| Zea mays RFLP probe umc107 (CBM 1.10) genomic sequence
          Length = 1105

 Score =  167 bits (84), Expect = 8e-38
 Identities = 126/140 (90%)
 Strand = Plus / Plus

                                                                       
Query: 150 gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
           ||||||||||||||||| ||  | |||||||| ||  | |||||||| ||||||||||||
Sbjct: 6   gttcccagaaactttaggctgctagaagaactagaacgtggtgagaagggcattggtgat 65

                                                                       
Query: 210 ggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctggacagga 269
           ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||
Sbjct: 66  ggaactgtgagctatgggatggacgatgctgatgacatatttatgcggtcctggacagga 125

                               
Query: 270 actattattggtccacccaa 289
           ||||| |||||||| |||||
Sbjct: 126 actatcattggtcctcccaa 145



 Score =  151 bits (76), Expect = 5e-33
 Identities = 115/128 (89%)
 Strand = Plus / Plus

                                                                       
Query: 291 actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
           |||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||| 
Sbjct: 235 actgttcacgagggacgaatctatcagttaaagctgttttgtgatacagattatccagat 294

                                                                       
Query: 351 aaaccaccgactgtccggttccaggccagggtcaatatgacatgcgtgaatcaagaaact 410
           ||||||||||||||||| |||||| |  || ||||||||||||| ||||| |||||||||
Sbjct: 295 aaaccaccgactgtccgattccagactcggatcaatatgacatgtgtgaaccaagaaact 354

                   
Query: 411 ggaatggt 418
           ||| ||||
Sbjct: 355 ggattggt 362



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                       
Query: 438 atgcttggaaactggcaaagggaacatacaatggaggacatcctcatcagccttaaaaag 497
           ||||||||||| ||| ||||||||||||| ||||||||||| || | |||| | |||| |
Sbjct: 484 atgcttggaaagtgggaaagggaacatacgatggaggacattctgaccagcttaaaaagg 543

                                                          
Query: 498 gagatgtcaacccctcagaaccgcaggctccaccagccccatgaagg 544
           ||||||||||| || ||||| ||||||||  |||| || ||||||||
Sbjct: 544 gagatgtcaactccacagaatcgcaggctgtaccaacctcatgaagg 590

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>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT2G36060) mRNA, complete cds
          Length = 837

 Score =  147 bits (74), Expect = 7e-32
 Identities = 155/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 257 gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 316

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           |||||||| ||||| || ||||| || ||||| | ||| ||||| |||||||| || || 
Sbjct: 317 atgcgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatt 376

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| |||||||| | |||||| || || ||||| |||||||| ||||||
Sbjct: 377 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 436

             
Query: 372 ca 373
           ||
Sbjct: 437 ca 438

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>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060) mRNA, complete cds
          Length = 531

 Score =  147 bits (74), Expect = 7e-32
 Identities = 155/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 73  gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 132

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           |||||||| ||||| || ||||| || ||||| | ||| ||||| |||||||| || || 
Sbjct: 133 atgcgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatt 192

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| |||||||| | |||||| || || ||||| |||||||| ||||||
Sbjct: 193 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 252

             
Query: 372 ca 373
           ||
Sbjct: 253 ca 254

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>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060; F11F19.3) mRNA, complete cds
          Length = 769

 Score =  147 bits (74), Expect = 7e-32
 Identities = 155/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 191 gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 250

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           |||||||| ||||| || ||||| || ||||| | ||| ||||| |||||||| || || 
Sbjct: 251 atgcgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatt 310

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| |||||||| | |||||| || || ||||| |||||||| ||||||
Sbjct: 311 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 370

             
Query: 372 ca 373
           ||
Sbjct: 371 ca 372

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>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence
          Length = 798

 Score =  147 bits (74), Expect = 7e-32
 Identities = 155/182 (85%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 233 gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 292

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           |||||||| ||||| || ||||| || ||||| | ||| ||||| |||||||| || || 
Sbjct: 293 atgcgctcttggactggcactatcatcggtcctcacaacactgtacatgagggtcggatt 352

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| |||||||| | |||||| || || ||||| |||||||| ||||||
Sbjct: 353 tatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcggttc 412

             
Query: 372 ca 373
           ||
Sbjct: 413 ca 414

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>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence
          Length = 832

 Score =  139 bits (70), Expect = 2e-29
 Identities = 154/182 (84%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 203 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 262

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || ||||| || ||||| | ||| ||||||||||| ||  |||||
Sbjct: 263 atgcgttcttggactggcactatcatcggtcctcacaacactgttcatgaaggtagaatc 322

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| || ||||| | |||||| || || ||||| || ||||||||||||
Sbjct: 323 tatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccggttc 382

             
Query: 372 ca 373
           ||
Sbjct: 383 ca 384

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>gb|DQ244159.1| Zea mays clone 2642 mRNA sequence
          Length = 792

 Score =  127 bits (64), Expect = 7e-26
 Identities = 229/284 (80%)
 Strand = Plus / Plus

                                                                       
Query: 144 gtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcatt 203
           |||||||||||| ||||||| || || || || || || ||| | || ||||| ||||||
Sbjct: 118 gtcgtcgttccccgaaacttcaggctattagaggagctcgagcgtggagagaagggcatt 177

                                                                       
Query: 204 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctgg 263
           ||||||||||| ||||||||||| ||||||||||| |||||||| || ||||| || |||
Sbjct: 178 ggtgatggaacagtgagctatggaatggatgatgccgatgacatctacatgcggtcatgg 237

                                                                       
Query: 264 acaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaag 323
           || || || || ||||| || | ||||||||| |||||||| || ||||| ||  |||||
Sbjct: 238 actggtaccatcattggccctcacaatactgtacatgagggtcgcatctaccagctgaag 297

                                                                       
Query: 324 ctgttctgtgatacagattatccagacaaaccaccgactgtccggttccaggccagggtc 383
            |||| ||||| |  || ||||| || || |||||  ||||| | |||||  | ||  ||
Sbjct: 298 ttgttttgtgacaaggactatccggagaagccaccatctgtcagattccactcaagaatc 357

                                                       
Query: 384 aatatgacatgcgtgaatcaagaaactggaatggttgatccaag 427
           || ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 358 aacatgacatgcgttaatcacgagacaggaatggttgatccaag 401

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>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence
          Length = 822

 Score =  127 bits (64), Expect = 7e-26
 Identities = 193/236 (81%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||| || 
Sbjct: 228 gagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatctac 287

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || ||||| || | ||||||||| |||||||| || |||
Sbjct: 288 atgcggtcatggactggtaccatcattggccctcacaatactgtacatgagggtcgcatc 347

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           || ||  ||||| |||| ||||| | ||| ||||| || || |||||  ||||| | |||
Sbjct: 348 taccagctgaagttgttttgtgacaaagactatccggagaagccaccatctgtcagattc 407

                                                                   
Query: 372 caggccagggtcaatatgacatgcgtgaatcaagaaactggaatggttgatccaag 427
           ||  | ||  |||| ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 408 cactcaagaatcaacatgacatgcgttaatcacgagacaggaatggttgatccaag 463

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>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT2G36060) mRNA, complete cds
          Length = 840

 Score =  125 bits (63), Expect = 3e-25
 Identities = 155/185 (83%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 257 gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 316

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaa---tactgttcatgagggacga 308
           |||||||| ||||| || ||||| || ||||| | |||    ||||| |||||||| || 
Sbjct: 317 atgcgctcttggactggcactatcatcggtcctcacaacgtaactgtacatgagggtcgg 376

                                                                       
Query: 309 atctatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccgg 368
           || ||||| |||||||| |||||||| | |||||| || || ||||| |||||||| |||
Sbjct: 377 atttatcagttgaagctcttctgtgacaaagattaccctgagaaacctccgactgttcgg 436

                
Query: 369 ttcca 373
           |||||
Sbjct: 437 ttcca 441

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>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT3G52560) mRNA, complete cds
          Length = 864

 Score =  123 bits (62), Expect = 1e-24
 Identities = 152/182 (83%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 202 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 261

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || || ||||| | ||| ||||||||||| ||  |||||
Sbjct: 262 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 321

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| || ||||| | |||||| || || ||||| || |||||||| |||
Sbjct: 322 tatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccgattc 381

             
Query: 372 ca 373
           ||
Sbjct: 382 ca 383

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>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 587

 Score =  123 bits (62), Expect = 1e-24
 Identities = 152/182 (83%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 76  gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 135

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || || ||||| | ||| ||||||||||| ||  |||||
Sbjct: 136 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 195

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| || ||||| | |||||| || || ||||| || |||||||| |||
Sbjct: 196 tatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccgattc 255

             
Query: 372 ca 373
           ||
Sbjct: 256 ca 257

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>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 810

 Score =  123 bits (62), Expect = 1e-24
 Identities = 152/182 (83%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 151 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 210

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || || ||||| | ||| ||||||||||| ||  |||||
Sbjct: 211 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 270

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| || ||||| | |||||| || || ||||| || |||||||| |||
Sbjct: 271 tatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccgattc 330

             
Query: 372 ca 373
           ||
Sbjct: 331 ca 332

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>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 838

 Score =  123 bits (62), Expect = 1e-24
 Identities = 152/182 (83%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 177 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 236

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || || ||||| | ||| ||||||||||| ||  |||||
Sbjct: 237 atgcgttcttggactggcaccatcatcggtcctcacaacactgttcatgaaggtagaatc 296

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| || ||||| | |||||| || || ||||| || |||||||| |||
Sbjct: 297 tatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccgattc 356

             
Query: 372 ca 373
           ||
Sbjct: 357 ca 358

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>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT1G23260) mRNA, complete cds
          Length = 772

 Score =  119 bits (60), Expect = 2e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| ||||| || ||||||||| | |||||||| ||||| |||||||||||||| ||
Sbjct: 135 ggtcgttgttccgaggaactttagattgttggaagagcttgaaagaggtgagaaaggtat 194

                                                                       
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctg 262
           ||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||  || ||
Sbjct: 195 tggagatggtactgttagctatggaatggatgatgctgatgatatttatatgcaatcttg 254

                                           
Query: 263 gacaggaactattattggtccacccaatactg 294
           ||| || || ||| ||||||| || |||||||
Sbjct: 255 gactggcaccattcttggtcctcctaatactg 286

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>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260)
           mRNA, complete cds
          Length = 618

 Score =  119 bits (60), Expect = 2e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| ||||| || ||||||||| | |||||||| ||||| |||||||||||||| ||
Sbjct: 21  ggtcgttgttccgaggaactttagattgttggaagagcttgaaagaggtgagaaaggtat 80

                                                                       
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctg 262
           ||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||  || ||
Sbjct: 81  tggagatggtactgttagctatggaatggatgatgctgatgatatttatatgcaatcttg 140

                                           
Query: 263 gacaggaactattattggtccacccaatactg 294
           ||| || || ||| ||||||| || |||||||
Sbjct: 141 gactggcaccattcttggtcctcctaatactg 172

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>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260;
           F26F24.10) mRNA, complete cds
          Length = 771

 Score =  119 bits (60), Expect = 2e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| ||||| || ||||||||| | |||||||| ||||| |||||||||||||| ||
Sbjct: 135 ggtcgttgttccgaggaactttagattgttggaagagcttgaaagaggtgagaaaggtat 194

                                                                       
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctg 262
           ||| ||||| ||||| |||||||| ||||||||||||||||| || |||||||  || ||
Sbjct: 195 tggagatggtactgttagctatggaatggatgatgctgatgatatttatatgcaatcttg 254

                                           
Query: 263 gacaggaactattattggtccacccaatactg 294
           ||| || || ||| ||||||| || |||||||
Sbjct: 255 gactggcaccattcttggtcctcctaatactg 286

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>gb|AY104181.1| Zea mays PCO060230 mRNA sequence
          Length = 1061

 Score =  119 bits (60), Expect = 2e-23
 Identities = 192/236 (81%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||| || 
Sbjct: 347 gagaagggcattggtgatgggacagtgagctatggaatggatgatgctgatgacatctac 406

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || || ||||| || | ||||||||| |||||||| || |||
Sbjct: 407 atgcggtcatggactggtaccatcattggccctcacaatactgtacatgagggtcgcatc 466

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           || ||  ||||| |||| ||||| |  || ||||| || || |||||  ||||| | |||
Sbjct: 467 taccagctgaagttgttttgtgacaaggactatccggagaagccaccatctgtcagattc 526

                                                                   
Query: 372 caggccagggtcaatatgacatgcgtgaatcaagaaactggaatggttgatccaag 427
           ||  | ||  |||| ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 527 cactcaagaatcaacatgacatgcgttaatcacgagacaggaatggttgatccaag 582

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>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein
           mRNA, complete cds
          Length = 607

 Score =  117 bits (59), Expect = 6e-23
 Identities = 146/175 (83%)
 Strand = Plus / Plus

                                                                       
Query: 172 tggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatgg 231
           |||| ||||||||  | ||||| ||||| ||||| ||||||| ||| || ||||| ||||
Sbjct: 157 tggaggaacttgaacgtggtgaaaaaggaattggagatggaagtgtcagttatggtatgg 216

                                                                       
Query: 232 atgatgctgatgacatatatatgcgctcctggacaggaactattattggtccacccaata 291
           ||||||  ||||| ||||||||||| || |||||||| || || |||||||| | |||||
Sbjct: 217 atgatggagatgatatatatatgcgttcttggacaggcacaataattggtcctcacaata 276

                                                                  
Query: 292 ctgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatcc 346
           |||| |||||||| || || |||||| ||||||| |||||||| | |||||||||
Sbjct: 277 ctgtacatgagggccgcatttatcaactgaagctcttctgtgacaaagattatcc 331

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>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds
          Length = 818

 Score =  111 bits (56), Expect = 4e-21
 Identities = 155/188 (82%)
 Strand = Plus / Plus

                                                                       
Query: 171 ttggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatg 230
           |||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 156 ttggaagagcttgagagaggtgagaagggaattggagatggaactgtaagctatggaatg 215

                                                                       
Query: 231 gatgatgctgatgacatatatatgcgctcctggacaggaactattattggtccacccaat 290
           |||||||||||||| || || ||||  || ||||| || || ||||| ||||| ||   |
Sbjct: 216 gatgatgctgatgatatctacatgcaatcatggactgggacaattataggtccccctggt 275

                                                                       
Query: 291 actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
           ||||| || || || || ||||| ||||||||  |||| |||| ||  ||||||||||||
Sbjct: 276 actgtccacgaagggcgtatctaccaattgaaattgttttgtggtaaggattatccagac 335

                   
Query: 351 aaaccacc 358
           || |||||
Sbjct: 336 aatccacc 343

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>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT1G70660) mRNA, complete cds
          Length = 838

 Score =  107 bits (54), Expect = 6e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| |||||||||||||||||| | |||||||| || || |||||||||||||| ||
Sbjct: 181 ggtcgttgttcccagaaactttagattattggaagagctagaaagaggtgagaaaggaat 240

                                                     
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatga 244
           ||| ||||| || ||||| ||||| |||||||||||||||||
Sbjct: 241 tggagatgggacagtgagttatggaatggatgatgctgatga 282

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>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence
          Length = 815

 Score =  107 bits (54), Expect = 6e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| |||||||||||||||||| | |||||||| || || |||||||||||||| ||
Sbjct: 158 ggtcgttgttcccagaaactttagattattggaagagctagaaagaggtgagaaaggaat 217

                                                     
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatga 244
           ||| ||||| || ||||| ||||| |||||||||||||||||
Sbjct: 218 tggagatgggacagtgagttatggaatggatgatgctgatga 259

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>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 511

 Score =  107 bits (54), Expect = 6e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| |||||||||||||||||| | |||||||| || || |||||||||||||| ||
Sbjct: 21  ggtcgttgttcccagaaactttagattattggaagagctagaaagaggtgagaaaggaat 80

                                                     
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatga 244
           ||| ||||| || ||||| ||||| |||||||||||||||||
Sbjct: 81  tggagatgggacagtgagttatggaatggatgatgctgatga 122

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>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 827

 Score =  107 bits (54), Expect = 6e-20
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           |||||| |||||||||||||||||| | |||||||| || || |||||||||||||| ||
Sbjct: 166 ggtcgttgttcccagaaactttagattattggaagagctagaaagaggtgagaaaggaat 225

                                                     
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatga 244
           ||| ||||| || ||||| ||||| |||||||||||||||||
Sbjct: 226 tggagatgggacagtgagttatggaatggatgatgctgatga 267

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>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score =  107 bits (54), Expect = 6e-20
 Identities = 93/106 (87%)
 Strand = Plus / Minus

                                                                         
Query: 150   gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
             ||||| || ||||||||| | |||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 34681 gttccgaggaactttagattgttggaagagcttgaaagaggtgagaaaggtattggagat 34622

                                                           
Query: 210   ggaactgtgagctatgggatggatgatgctgatgacatatatatgc 255
             || ||||| |||||||| ||||||||||||||||| || |||||||
Sbjct: 34621 ggtactgttagctatggaatggatgatgctgatgatatttatatgc 34576

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>ref|NM_001073756.1| Oryza sativa (japonica cultivar-group) Os12g0605400 (Os12g0605400)
           mRNA, complete cds
          Length = 923

 Score =  103 bits (52), Expect = 1e-18
 Identities = 154/188 (81%)
 Strand = Plus / Plus

                                                                       
Query: 144 gtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcatt 203
           |||||||| || || ||||| |||||  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 228 gtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatc 287

                                                                       
Query: 204 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctgg 263
           ||||||||| | || |||||||| ||||||||||| || || || || |||||||| |||
Sbjct: 288 ggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttgg 347

                                                                       
Query: 264 acaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaag 323
           ||||| || ||||||||||| |  || ||||| |||||||| || || || ||| |||||
Sbjct: 348 acaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaag 407

                   
Query: 324 ctgttctg 331
           || |||||
Sbjct: 408 cttttctg 415

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>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full
           insert sequence
          Length = 924

 Score =  103 bits (52), Expect = 1e-18
 Identities = 154/188 (81%)
 Strand = Plus / Plus

                                                                       
Query: 144 gtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcatt 203
           |||||||| || || ||||| |||||  | ||||| ||||||||||| ||||| ||||| 
Sbjct: 229 gtcgtcgtgcctaggaacttcagactgctagaagagcttgagagaggggagaagggcatc 288

                                                                       
Query: 204 ggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctgg 263
           ||||||||| | || |||||||| ||||||||||| || || || || |||||||| |||
Sbjct: 289 ggtgatggatcagtaagctatggaatggatgatgcagacgatatctacatgcgctcttgg 348

                                                                       
Query: 264 acaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaag 323
           ||||| || ||||||||||| |  || ||||| |||||||| || || || ||| |||||
Sbjct: 349 acaggcacaattattggtccccataacactgtccatgagggccggatataccaactgaag 408

                   
Query: 324 ctgttctg 331
           || |||||
Sbjct: 409 cttttctg 416

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>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT3G52560) mRNA, complete cds
          Length = 864

 Score =  101 bits (51), Expect = 4e-18
 Identities = 152/185 (82%), Gaps = 3/185 (1%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 202 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 261

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaa---tactgttcatgagggacga 308
           ||||| || ||||| || || || || ||||| | |||    ||||||||||| ||  ||
Sbjct: 262 atgcgttcttggactggcaccatcatcggtcctcacaacgtaactgttcatgaaggtaga 321

                                                                       
Query: 309 atctatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccgg 368
           |||||||| |||||||| || ||||| | |||||| || || ||||| || |||||||| 
Sbjct: 322 atctatcagttgaagctcttttgtgacaaagattacccggagaaacctccaactgtccga 381

                
Query: 369 ttcca 373
           |||||
Sbjct: 382 ttcca 386

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>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score =  101 bits (51), Expect = 4e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 150   gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
             |||||||||||||||||| | |||||||| || || |||||||||||||| ||||| |||
Sbjct: 63631 gttcccagaaactttagattattggaagagctagaaagaggtgagaaaggaattggagat 63572

                                                
Query: 210   ggaactgtgagctatgggatggatgatgctgatga 244
             || || ||||| ||||| |||||||||||||||||
Sbjct: 63571 gggacagtgagttatggaatggatgatgctgatga 63537

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>emb|CT833593.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051B14, full
           insert sequence
          Length = 852

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
           ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 185 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 244

                                                                       
Query: 249 tatatgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacga 308
           || ||||| || ||||| || || || ||||||||||  |||| ||| ||||| || || 
Sbjct: 245 tacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgc 304

                                     
Query: 309 atctatcaattgaagctgttctgtga 334
           ||||| ||  ||||||||||||||||
Sbjct: 305 atctaccagctgaagctgttctgtga 330

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>emb|CT831939.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA023B04, full
           insert sequence
          Length = 390

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
           ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 141 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 200

                                                                       
Query: 249 tatatgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacga 308
           || ||||| || ||||| || || || ||||||||||  |||| ||| ||||| || || 
Sbjct: 201 tacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgc 260

                                     
Query: 309 atctatcaattgaagctgttctgtga 334
           ||||| ||  ||||||||||||||||
Sbjct: 261 atctaccagctgaagctgttctgtga 286

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>ref|NM_001069339.1| Oryza sativa (japonica cultivar-group) Os09g0297100 (Os09g0297100)
           mRNA, complete cds
          Length = 831

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
           ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 135 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 194

                                                                       
Query: 249 tatatgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacga 308
           || ||||| || ||||| || || || ||||||||||  |||| ||| ||||| || || 
Sbjct: 195 tacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgc 254

                                     
Query: 309 atctatcaattgaagctgttctgtga 334
           ||||| ||  ||||||||||||||||
Sbjct: 255 atctaccagctgaagctgttctgtga 280

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>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full
           insert sequence
          Length = 833

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
           ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 137 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 196

                                                                       
Query: 249 tatatgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacga 308
           || ||||| || ||||| || || || ||||||||||  |||| ||| ||||| || || 
Sbjct: 197 tacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgc 256

                                     
Query: 309 atctatcaattgaagctgttctgtga 334
           ||||| ||  ||||||||||||||||
Sbjct: 257 atctaccagctgaagctgttctgtga 282

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>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full
           insert sequence
          Length = 853

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
           ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 188 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 247

                                                                       
Query: 249 tatatgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacga 308
           || ||||| || ||||| || || || ||||||||||  |||| ||| ||||| || || 
Sbjct: 248 tacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgc 307

                                     
Query: 309 atctatcaattgaagctgttctgtga 334
           ||||| ||  ||||||||||||||||
Sbjct: 308 atctaccagctgaagctgttctgtga 333

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>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                         
Query: 192   gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
             |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 13452 gagaaaggtattggagatggaactgtgagctatggaatggatgatggagatgacatttat 13511

                                             
Query: 252   atgcgctcctggacaggaactattattggtcc 283
             |||||||| ||||| || ||||| || |||||
Sbjct: 13512 atgcgctcttggactggcactatcatcggtcc 13543

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>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds
          Length = 475

 Score = 93.7 bits (47), Expect = 9e-16
 Identities = 137/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 207 gatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctggaca 266
           ||||| |||||||||||||| |||||||||| |||||| || |||||||| || ||||||
Sbjct: 69  gatggcactgtgagctatggaatggatgatggtgatgatatctatatgcgatcatggaca 128

                                                                       
Query: 267 ggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaagctg 326
           || || || || || || | |||| |||| |||||||| || ||||| ||||||||||| 
Sbjct: 129 ggcaccatcatcggccctcacaattctgtgcatgagggtcgcatctaccaattgaagcta 188

                                                          
Query: 327 ttctgtgatacagattatccagacaaaccaccgactgtccggttcca 373
           || ||||| | |||||| || || || || || |||||||| |||||
Sbjct: 189 ttttgtgacaaagattaccctgagaagcctccaactgtccgtttcca 235

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>emb|CT987735.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 842

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 178/222 (80%)
 Strand = Plus / Plus

                                                                       
Query: 143 ggtcgtcgttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcat 202
           ||||||||||||  |||| || ||| | ||||| ||||||||| | || || ||||| ||
Sbjct: 170 ggtcgtcgttcctcgaaatttcagattattggaggaacttgagcgtggagaaaaaggaat 229

                                                                       
Query: 203 tggtgatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctg 262
           ||| ||||| ||||| ||||| |||||||||||||  || ||||| || ||| | || ||
Sbjct: 230 tggagatggcactgtcagctacgggatggatgatggagacgacatttacatgagatcttg 289

                                                                       
Query: 263 gacaggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaa 322
           ||| || || || |||||||| | ||||||||| ||||| || || ||||| || |||||
Sbjct: 290 gactggcacaatcattggtcctcacaatactgtacatgaaggtcgtatctaccagttgaa 349

                                                     
Query: 323 gctgttctgtgatacagattatccagacaaaccaccgactgt 364
           ||||||||| || | |||||| || || || ||||| |||||
Sbjct: 350 gctgttctgcgacaaagattacccggaaaagccacccactgt 391

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>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence
          Length = 152779

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                          
Query: 171    ttggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatg 230
              |||||||| |||||| |||||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 105554 ttggaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatg 105495

                                                                
Query: 231    gatgatgctgatgacatatatatgcgctcctggacaggaactattattgg 280
              ||||| |||||||| ||||  ||||  || ||||| || |||||||||||
Sbjct: 105494 gatgacgctgatgatatattcatgcagtcatggactgggactattattgg 105445

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>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence
          Length = 843

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 121/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 171 ttggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatg 230
           ||||| || ||||| ||||| || ||||| || || ||||||||||| ||||||||||||
Sbjct: 190 ttggaggagcttgaaagaggagaaaaaggaataggggatggaactgtcagctatgggatg 249

                                                                       
Query: 231 gatgatgctgatgacatatatatgcgctcctggacaggaactattattggtccacccaat 290
           |||||||| |||||| | || ||||  || |||||||||||||| ||||| || || |||
Sbjct: 250 gatgatgcagatgacgtgtacatgcagtcatggacaggaactatcattggccctcctaat 309

                                     
Query: 291 actgttcatgagggacgaatctatca 316
           ||||| || || || || ||||||||
Sbjct: 310 actgtacacgaagggcgcatctatca 335

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>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 171  ttggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatg 230
            |||||||| |||||| |||||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 2886 ttggaagagcttgagcgaggtgagaagggaattggagatggaactgttagctatggaatg 2827

                                                              
Query: 231  gatgatgctgatgacatatatatgcgctcctggacaggaactattattgg 280
            ||||| |||||||| ||||  ||||  || ||||| || |||||||||||
Sbjct: 2826 gatgacgctgatgatatattcatgcagtcatggactgggactattattgg 2777

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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                            
Query: 174      gaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatggat 233
                ||||| ||||||||||| ||||| ||||| ||||||||| | || |||||||| ||||||
Sbjct: 25593349 gaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggat 25593290

                                                                  
Query: 234      gatgctgatgacatatatatgcgctcctggacaggaactattattggtcc 283
                ||||| || || || || |||||||| |||||||| || |||||||||||
Sbjct: 25593289 gatgcagacgatatctacatgcgctcttggacaggcacaattattggtcc 25593240

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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 91.7 bits (46), Expect = 4e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                         
Query: 174   gaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatggat 233
             ||||| ||||||||||| ||||| ||||| ||||||||| | || |||||||| ||||||
Sbjct: 80369 gaagagcttgagagaggggagaagggcatcggtgatggatcagtaagctatggaatggat 80428

                                                               
Query: 234   gatgctgatgacatatatatgcgctcctggacaggaactattattggtcc 283
             ||||| || || || || |||||||| |||||||| || |||||||||||
Sbjct: 80429 gatgcagacgatatctacatgcgctcttggacaggcacaattattggtcc 80478

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>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b,
             complete sequence
          Length = 78574

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                         
Query: 171   ttggaagaacttgagagaggtgagaaaggcattggtgatggaactgtgagctatgggatg 230
             |||||||| |||||| |||||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 75158 ttggaagagcttgagcgaggtgagaagggaattggagatggaactgtaagctatggaatg 75099

                                                            
Query: 231   gatgatgctgatgacatatatatgcgctcctggacaggaactattat 277
             || || |||||||| ||||| ||||  || ||||| ||||| |||||
Sbjct: 75098 gacgacgctgatgatatatacatgcagtcatggactggaacaattat 75052

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>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family
           protein-like mRNA, complete cds
          Length = 682

 Score = 83.8 bits (42), Expect = 9e-13
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| || ||||| ||||| || ||||||||||| ||||||||||  ||||| || |||
Sbjct: 178 gagaagggtattggagatgggacagtgagctatggtatggatgatggagatgatatttat 237

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || ||||||||||| | |||| |||| ||||| || || || 
Sbjct: 238 atgcgttcttggactggcaccattattggtcctcacaattctgtgcatgaaggccgcatt 297

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| ||||| || |  |||||||| || || ||||| | |||||| |||
Sbjct: 298 tatcagttgaagctattctgcgacaaggattatccggagaagccaccaagtgtccgtttc 357

             
Query: 372 ca 373
           ||
Sbjct: 358 ca 359

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>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like
           protein mRNA, complete cds
          Length = 764

 Score = 83.8 bits (42), Expect = 9e-13
 Identities = 147/182 (80%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| || ||||| ||||| || ||||||||||| ||||||||||  ||||| || |||
Sbjct: 170 gagaagggtattggagatgggacagtgagctatggtatggatgatggagatgatatttat 229

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || || ||||||||||| | |||| |||| ||||| || || || 
Sbjct: 230 atgcgttcttggactggcaccattattggtcctcacaattctgtgcatgaaggccgcatt 289

                                                                       
Query: 312 tatcaattgaagctgttctgtgatacagattatccagacaaaccaccgactgtccggttc 371
           ||||| |||||||| ||||| || |  |||||||| || || ||||| | |||||| |||
Sbjct: 290 tatcagttgaagctattctgcgacaaggattatccggagaagccaccaagtgtccgtttc 349

             
Query: 372 ca 373
           ||
Sbjct: 350 ca 351

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>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 83.8 bits (42), Expect = 9e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 192   gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
             |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 15847 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 15788

                           
Query: 252   atgcgctcctggac 265
             ||||| || |||||
Sbjct: 15787 atgcgttcttggac 15774



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                         
Query: 291   actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
             ||||||||||| ||  |||||||||| |||||||| || ||||| | |||||| || || 
Sbjct: 15508 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 15449

                                    
Query: 351   aaaccaccgactgtccggttcca 373
             ||||| || |||||||| |||||
Sbjct: 15448 aaacctccaactgtccgattcca 15426

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>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score = 83.8 bits (42), Expect = 9e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 192   gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
             |||||||| ||||| |||||||||||||||||||| ||||||||||  |||||||| |||
Sbjct: 77564 gagaaaggtattggggatggaactgtgagctatggaatggatgatggagatgacatctat 77505

                           
Query: 252   atgcgctcctggac 265
             ||||| || |||||
Sbjct: 77504 atgcgttcttggac 77491



 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                         
Query: 291   actgttcatgagggacgaatctatcaattgaagctgttctgtgatacagattatccagac 350
             ||||||||||| ||  |||||||||| |||||||| || ||||| | |||||| || || 
Sbjct: 77225 actgttcatgaaggtagaatctatcagttgaagctcttttgtgacaaagattacccggag 77166

                                    
Query: 351   aaaccaccgactgtccggttcca 373
             ||||| || |||||||| |||||
Sbjct: 77165 aaacctccaactgtccgattcca 77143

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 189     ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
               ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 7152169 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 7152110

                                                    
Query: 249     tatatgcgctcctggacaggaactattattggtccac 285
               || ||||| || ||||| || || || ||||||||||
Sbjct: 7152109 tacatgcggtcttggactggcaccatcattggtccac 7152073

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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1381_H04
          Length = 130961

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                        
Query: 189  ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
            ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 4274 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 4215

                                                 
Query: 249  tatatgcgctcctggacaggaactattattggtccac 285
            || ||||| || ||||| || || || ||||||||||
Sbjct: 4214 tacatgcggtcttggactggcaccatcattggtccac 4178

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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                          
Query: 189    ggtgagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacata 248
              ||||| || |||||||| |||||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 104248 ggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatc 104189

                                                   
Query: 249    tatatgcgctcctggacaggaactattattggtccac 285
              || ||||| || ||||| || || || ||||||||||
Sbjct: 104188 tacatgcggtcttggactggcaccatcattggtccac 104152

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>gb|DQ245427.1| Zea mays clone 15420 mRNA sequence
          Length = 765

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| |||||||| ||||| || ||||||||||| |||||||| || |||||||| || 
Sbjct: 153 gagaagggcattggagatgggacagtgagctatggaatggatgacgcagatgacatctac 212

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || ||||||||||| || |  ||||| || |||||||| || |||
Sbjct: 213 atgcgatcatggactggcactattattggccctcataataccgtccatgagggtcgcatc 272

                               
Query: 312 tatcaattgaagctgttctg 331
           || ||  ||||| |||||||
Sbjct: 273 taccagctgaagttgttctg 292

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>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence
          Length = 790

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| |||||||| ||||| || ||||||||||| |||||||| || |||||||| || 
Sbjct: 155 gagaagggcattggagatgggacagtgagctatggaatggatgacgcagatgacatctac 214

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || ||||||||||| || |  ||||| || |||||||| || |||
Sbjct: 215 atgcgatcatggactggcactattattggccctcataataccgtccatgagggtcgcatc 274

                               
Query: 312 tatcaattgaagctgttctg 331
           || ||  ||||| |||||||
Sbjct: 275 taccagctgaagttgttctg 294

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>gb|AY103581.1| Zea mays PCO136340 mRNA sequence
          Length = 1242

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 192 gagaaaggcattggtgatggaactgtgagctatgggatggatgatgctgatgacatatat 251
           ||||| |||||||| ||||| || ||||||||||| |||||||| || |||||||| || 
Sbjct: 241 gagaagggcattggagatgggacagtgagctatggaatggatgacgcagatgacatctac 300

                                                                       
Query: 252 atgcgctcctggacaggaactattattggtccacccaatactgttcatgagggacgaatc 311
           ||||| || ||||| || ||||||||||| || |  ||||| || |||||||| || |||
Sbjct: 301 atgcgatcatggactggcactattattggccctcataataccgtccatgagggtcgcatc 360

                               
Query: 312 tatcaattgaagctgttctg 331
           || ||  ||||| |||||||
Sbjct: 361 taccagctgaagttgttctg 380

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>gb|AC189492.1| Brassica rapa subsp. pekinensis clone KBrB084M08, complete sequence
          Length = 129722

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                         
Query: 150   gttcccagaaactttagacttttggaagaacttgagagaggtgagaaaggcattggtgat 209
             ||||| |||||||||||| | || ||||| ||||| |||||||||||||| || || || 
Sbjct: 50201 gttccaagaaactttagattgttagaagagcttgaaagaggtgagaaaggtatcggagac 50260

                                             
Query: 210   ggaactgtgagctatgggatggatgatgctga 241
             || || || |||||||| ||||||||||||||
Sbjct: 50261 ggtaccgtcagctatggaatggatgatgctga 50292

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>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds
          Length = 203

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 133/167 (79%)
 Strand = Plus / Plus

                                                                       
Query: 207 gatggaactgtgagctatgggatggatgatgctgatgacatatatatgcgctcctggaca 266
           ||||| || ||||| ||||| ||||||||||  || ||||| || ||||| || ||||| 
Sbjct: 26  gatggcacagtgagttatggaatggatgatggcgacgacatttacatgcgttcatggact 85

                                                                       
Query: 267 ggaactattattggtccacccaatactgttcatgagggacgaatctatcaattgaagctg 326
           || || || |||||||| | |||  |||| || || || || || |||||| ||||||||
Sbjct: 86  ggcaccatcattggtcctcacaactctgtacacgaaggtcgcatttatcaactgaagctg 145

                                                          
Query: 327 ttctgtgatacagattatccagacaaaccaccgactgtccggttcca 373
           || ||||| | |||||||||||| || || || |||||||| |||||
Sbjct: 146 ttttgtgacaaagattatccagaaaagcctccaactgtccgtttcca 192

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>emb|CT986910.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 488

 Score = 50.1 bits (25), Expect = 0.012
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 276 attggtccacccaatactgttcatgagggacgaatctatcaattgaagctgttctgtgat 335
           |||||||| | ||||||||| ||||| || || ||||| || |||||||||||||| || 
Sbjct: 31  attggtcctcacaatactgtacatgaaggtcgtatctaccagttgaagctgttctgcgac 90

                                        
Query: 336 acagattatccagacaaaccaccgactgt 364
           | |||||| || || || ||||| |||||
Sbjct: 91  aaagattacccggaaaagccacccactgt 119

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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 525     ctccaccagccccatgaaggcaa 547
               |||||||||||||||||||||||
Sbjct: 1697677 ctccaccagccccatgaaggcaa 1697655

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>gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosome 7, complete sequence
          Length = 176054

 Score = 42.1 bits (21), Expect = 3.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 454    aaagggaacatacaatggagg 474
              |||||||||||||||||||||
Sbjct: 129266 aaagggaacatacaatggagg 129286


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 132,488,638
Number of extensions: 7290606
Number of successful extensions: 151103
Number of sequences better than 10.0: 63
Number of HSP's gapped: 151093
Number of HSP's successfully gapped: 78
Length of query: 800
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 778
Effective length of database: 18,508,616,841
Effective search space: 14399703902298
Effective search space used: 14399703902298
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result