>O32231:RNR_BACSU Ribonuclease R - Bacillus subtilis|
          Length = 779
 Score = 36.2 bits (82), Expect = 0.43
 Identities = 38/151 (25%), Positives = 61/151 (40%)
 Frame = +3

Query: 900  DDAVTIDKQDSFVMPLCSPCRGMYILDQALVEVDLWVKKEGDESDDKQLLSAYADIEIRN 1079
            DDAVT+ K D           G Y L   + +V  +V +  +   DK+ L     + + +
Sbjct: 268  DDAVTVTKLDD----------GSYKLGVHIADVSHYVTE--NSPIDKEALERGTSVYLVD 315

Query: 1080 ETDMMFYERISGDNCNLDLKYEVLSKSVEAVIQVYAKVDHPHHVRFTAFSTEYDDHPHRG 1259
                M   R+S   C+L+ K + L+ S E  I    +V      +    +TE   +    
Sbjct: 316  RVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQGQVTEHEIFQSVIKTTERMTYSDVN 375

Query: 1260 VVLFDDKLFGKEKLFQHIVAVKENEELDVIL 1352
             +L DD    K+K    +   K+ E L  IL
Sbjct: 376  KILVDDDEELKQKYEPLVPMFKDMERLAQIL 406

>Q9V5N8:STAN_DROME Protocadherin-like wing polarity protein stan precursor - Drosophila|
            melanogaster (Fruit fly)
          Length = 3574

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
 Frame = -2

Query: 291  PRHAWRFHMDLNKCSCA--PAGHGARQPPPPFAGRLGLPGNPD---RHKRRGGERRDTKG 127
            P  A   H+   K S    P+ HG++   PP  G +    NP    RH   GG R  ++ 
Sbjct: 3486 PYTAEEDHLPARKLSHTQPPSLHGSQLMQPPGVGLVNDVNNPGLMGRHTLNGGSRHSSRA 3545

Query: 126  SSMQGSLAPPSMP 88
            SS   ++  P  P
Sbjct: 3546 SSPPSTMVAPMQP 3558

>Q09456:COL80_CAEEL Putative cuticle collagen 80 - Caenorhabditis elegans|
          Length = 317

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
 Frame = -2

Query: 243 APAGHGARQPPPP--------FAGRLGLPGNPDRHKRRGGERRDTKG-SSMQGSLAPPSM 91
           APA  G + PP P          G+ G PGNP R  + G   R   G S   G   PP  
Sbjct: 159 APAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGA 218

Query: 90  P 88
           P
Sbjct: 219 P 219

>Q9H7X3:ZN696_HUMAN Zinc finger protein 696 - Homo sapiens (Human)|
          Length = 374

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = -2

Query: 243 APAGHGARQPPPPFAGRLGLPGNPDRHKRRGGERR------DTKGSSMQGSLAPPS 94
           AP G G R  PP   G LGL  N +  +R GG  R       T G S   S  PP+
Sbjct: 54  APEGEGHRGGPPRALGSLGLCENQEARERPGGSPRGPVTSEKTGGQSGLESDVPPN 109

>P46152:GATA4_RAT Transcription factor GATA-4 - Rattus norvegicus (Rat)|
          Length = 440

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -2

Query: 723 GSCRHGGSRIWPQGCIHLLRQGAPSWDRGGKEYDRHLPEP*SPR 592
           G+   G S   P G     +QG+P W + G E   + P P SPR
Sbjct: 64  GATSGGSSGAGPSGAGPGTQQGSPGWSQAGAEGAAYTPPPVSPR 107

>Q08369:GATA4_MOUSE Transcription factor GATA-4 - Mus musculus (Mouse)|
          Length = 440

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -2

Query: 723 GSCRHGGSRIWPQGCIHLLRQGAPSWDRGGKEYDRHLPEP*SPR 592
           G+   G S   P G     +QG+P W + G E   + P P SPR
Sbjct: 64  GTTSGGSSGAGPSGAGPGTQQGSPGWSQAGAEGAAYTPPPVSPR 107

>Q5QJC2:DCR1C_CHICK Artemis protein - Gallus gallus (Chicken)|
          Length = 714

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 1203 EDGQPLHILVLQPQHFWKGLHISSPNCNYHQ-KSVHKTSYQFHSGF 1069
            ++G PLH++ ++P   W G  I   N      +S ++  + FHS +
Sbjct: 277  QNGTPLHVISIKPSTMWFGERIKKTNVIVRTGESTYRACFSFHSSY 322

>Q7UMC0:SYL_RHOBA Leucyl-tRNA synthetase - Rhodopirellula baltica|
          Length = 950

 Score = 32.0 bits (71), Expect = 8.2
 Identities = 16/71 (22%), Positives = 34/71 (47%)
 Frame = +3

Query: 708 RVYKTHDTSTTPSTLGKRTPSNMLQLFSMRLSIFEPTYPISLYGIFAVRDYLDPRRNYVF 887
           ++ K+      P ++ +   ++ L+L+ M +   E T P ++ G+  VR +LD     + 
Sbjct: 718 KMSKSRGNVVNPDSVVRDYGADSLRLYEMFMGPLEATKPWAMNGVGGVRSFLDRVWRMII 777

Query: 888 NRPRDDAVTID 920
           + P D+    D
Sbjct: 778 DEPEDELKVSD 788

>P39061:COIA1_MOUSE Collagen alpha-1(XVIII) chain precursor [Contains: Endostatin] - Mus|
            musculus (Mouse)
          Length = 1774

 Score = 32.0 bits (71), Expect = 8.2
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
 Frame = -2

Query: 228  GARQPPPPFA-----GRLGLPGNPDRHKRRG-----GERRDTK-GSSMQGSLAPPSMP 88
            G R PP P+      G +G PG P R    G     GE  D   G SM+G   PP  P
Sbjct: 1224 GFRGPPGPYGRPGHKGEIGFPGRPGRPGTNGLKGEKGEPGDASLGFSMRGLPGPPGPP 1281

>P39059:COFA1_HUMAN Collagen alpha-1(XV) chain precursor [Contains: Endostatin - Homo|
            sapiens (Human)
          Length = 1388

 Score = 32.0 bits (71), Expect = 8.2
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
 Frame = -2

Query: 240  PAGHGARQP-----PPPFAGRLGLPGNPDRHKRRGGERRDTKGSSMQGSLAPPSMP 88
            P  HGA  P     PP   G  GLPG P R    G   + TKG        PP +P
Sbjct: 884  PGMHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNG--LKGTKGDPGVIMQGPPGLP 937


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 296,209,539
Number of extensions: 6706424
Number of successful extensions: 17797
Number of sequences better than 10.0: 10
Number of HSP's gapped: 17759
Number of HSP's successfully gapped: 10
Length of query: 570
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 451
Effective length of database: 68,045,334
Effective search space: 30688445634
Effective search space used: 30688445634
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)