ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf48b24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtatata 974 |||||||||||||| ||||||||||||||| Sbjct: 23080345 ctttgtagcccttgccgaggaatgtatata 23080316 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 23010118 ctttgcagcccttgtcgaggaatgtat 23010092 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 23020108 ctttgcagcccttgtcgaggaatgtat 23020082
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtatata 974 |||||||||||||| ||||||||||||||| Sbjct: 12504 ctttgtagcccttgccgaggaatgtatata 12475
>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence Length = 155092 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtccca 28 |||||||||||||||||||||||| Sbjct: 26229 aagaaaagaaaaagaaaagtccca 26252
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 434 cgattatgaagaagaagaagacga 457 |||||||||||||||||||||||| Sbjct: 670821 cgattatgaagaagaagaagacga 670844
>gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, complete sequence Length = 160144 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtccca 28 |||||||||||||||||||||||| Sbjct: 160111 aagaaaagaaaaagaaaagtccca 160134
>ref|XM_446265.1| Candida glabrata CBS138, CAGL0F06831g partial mRNA Length = 3279 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 434 cgattatgaagaagaagaagacga 457 |||||||||||||||||||||||| Sbjct: 2649 cgattatgaagaagaagaagacga 2672
>ref|NM_001049983.1| Oryza sativa (japonica cultivar-group) Os01g0590200 (Os01g0590200) mRNA, partial cds Length = 1661 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Plus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 834 ctttgcagcccttgtcgaggaatgtat 860
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 13519235 gaagaagaagaagacgacggcaa 13519257
>gb|BT015267.1| Drosophila melanogaster LD28881 full insert cDNA Length = 4211 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 92 gaagaagaagaagacgacggcaa 114
>gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome 9, complete sequence Length = 247463 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 20020 gaagaagaagaagacgacggcaa 20042
>gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome 3, complete sequence Length = 144150 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||||| Sbjct: 76978 tgaagaaaagaaaaagaaaagtc 77000
>gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosome 9, complete sequence Length = 200985 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 57932 gaagaagaagaagacgacggcaa 57954
>ref|NM_078592.2| Drosophila melanogaster NFAT CG11172-RA (NFAT), mRNA Length = 5858 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 446 gaagaagaagaagacgacggcaa 468
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 56117 gaagaagaagaagacgacggcaa 56095
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 80524 ctttgcagcccttgtcgaggaatgtat 80498 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Minus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 90514 ctttgcagcccttgtcgaggaatgtat 90488
>gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR30C16, complete sequence Length = 185810 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 117269 gaagaagaagaagacgacggcaa 117291
>gb|AF195496.1|AF195496 Drosophila melanogaster clone LD28881 dNFAT (dNFAT) mRNA, dNFAT-1335 allele, complete cds Length = 4191 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 92 gaagaagaagaagacgacggcaa 114
>gb|BT003742.1| Drosophila melanogaster LD10950 full insert cDNA Length = 5248 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaa 463 ||||||||||||||||||||||| Sbjct: 446 gaagaagaagaagacgacggcaa 468
>dbj|AK105022.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G09, full insert sequence Length = 1644 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Plus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 829 ctttgcagcccttgtcgaggaatgtat 855
>dbj|AK099235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105L12, full insert sequence Length = 1637 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Plus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 822 ctttgcagcccttgtcgaggaatgtat 848
>dbj|AK063416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-B09, full insert sequence Length = 1661 Score = 46.1 bits (23), Expect = 0.42 Identities = 26/27 (96%) Strand = Plus / Plus Query: 945 ctttgtagcccttgtcgaggaatgtat 971 ||||| ||||||||||||||||||||| Sbjct: 834 ctttgcagcccttgtcgaggaatgtat 860
>gb|BC127574.1| Danio rerio cDNA clone IMAGE:6799688, partial cds Length = 1422 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacgg 460 |||||||||||||||||||||| Sbjct: 203 atgaagaagaagaagacgacgg 224
>gb|BC127572.1| Danio rerio cDNA clone IMAGE:6797589, partial cds Length = 1422 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacgg 460 |||||||||||||||||||||| Sbjct: 203 atgaagaagaagaagacgacgg 224
>ref|NM_001072586.1| Oryza sativa (japonica cultivar-group) Os12g0127500 (Os12g0127500) mRNA, complete cds Length = 1428 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 514 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 567
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 363 gattatgacgacgacgttgatgatgg 388 |||||||||||||||| ||||||||| Sbjct: 9884 gattatgacgacgacgatgatgatgg 9909
>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence Length = 220191 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtcc 26 |||||||||||||||||||||| Sbjct: 35539 aagaaaagaaaaagaaaagtcc 35518
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 28913 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 28966
>ref|XM_385201.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05025.1) partial mRNA Length = 2691 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 tatgacgacgacgttgatgatg 387 |||||||||||||||||||||| Sbjct: 175 tatgacgacgacgttgatgatg 196
>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7, complete sequence Length = 154034 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacgg 460 |||||||||||||||||||||| Sbjct: 36881 atgaagaagaagaagacgacgg 36860
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 1317948 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 1318001
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 1410118 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 1410171
>gb|AC157937.6| Mus musculus chromosome 1, clone RP23-417N10, complete sequence Length = 173856 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1107 atttctggtgataattgcaatt 1128 |||||||||||||||||||||| Sbjct: 30214 atttctggtgataattgcaatt 30235
>gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, complete sequence Length = 163590 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtcccaac 30 ||||||||||||||||||| |||||| Sbjct: 3061 aagaaaagaaaaagaaaagccccaac 3036
>emb|AL358113.21| Human DNA sequence from clone RP11-16N10 on chromosome 9q13-21.33 Contains the TJP2 gene for tight junction protein 2 (zona occludens 2) (X104, ZO-2) and two CpG islands, complete sequence Length = 129719 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtcc 26 |||||||||||||||||||||| Sbjct: 99610 aagaaaagaaaaagaaaagtcc 99589
>emb|AL357337.12| Human DNA sequence from clone RP11-78L16 on chromosome 13, complete sequence Length = 60954 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ggtgaagaaaagaaaaagaaaa 22 |||||||||||||||||||||| Sbjct: 14485 ggtgaagaaaagaaaaagaaaa 14464
>ref|XM_691549.1| PREDICTED: Danio rerio similar to chromodomain helicase DNA binding protein 3 isoform 2 (LOC568230), mRNA Length = 5648 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacgg 460 |||||||||||||||||||||| Sbjct: 190 atgaagaagaagaagacgacgg 211
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1234 aatatgatgaccatcctcatcgtgga 1259 |||||||||||||||||||| ||||| Sbjct: 1319360 aatatgatgaccatcctcatggtgga 1319385
>gb|AC007252.2| Homo sapiens BAC clone RP11-407F2 from 2, complete sequence Length = 159952 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 aaaagaaaaagaaaagtcccaa 29 |||||||||||||||||||||| Sbjct: 134594 aaaagaaaaagaaaagtcccaa 134573
>dbj|AK064595.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-G10, full insert sequence Length = 1428 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 514 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 567
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Minus Query: 852 cgggattacttggacccgcgacggaactacgtctttaaccgtcccagggatgac 905 |||||| | |||||||||| ||| |||||| |||| ||||| ||||||||||| Sbjct: 111221 cgggatcatttggacccgctacgcaactacatcttcaaccgcaccagggatgac 111168
>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence Length = 163121 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacgg 460 |||||||||||||||||||||| Sbjct: 30043 atgaagaagaagaagacgacgg 30022
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete sequence Length = 165527 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1576 ataaatgagttacagttaaatt 1597 |||||||||||||||||||||| Sbjct: 111612 ataaatgagttacagttaaatt 111633
>dbj|AP001976.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-179A16 Length = 141272 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaagt 24 |||||||||||||||||||||| Sbjct: 102589 tgaagaaaagaaaaagaaaagt 102568
>ref|XM_001009743.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00158150) mRNA, complete cds Length = 2127 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 gattatgaagaagaagaagac 455 ||||||||||||||||||||| Sbjct: 2017 gattatgaagaagaagaagac 2037
>emb|CT833859.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA241F17, full insert sequence Length = 2232 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 tcatcgtggagttgtgctgtt 1270 ||||||||||||||||||||| Sbjct: 252 tcatcgtggagttgtgctgtt 272
>gb|AC190034.5| Rhesus Macaque BAC CH250-532C21 () complete sequence Length = 146480 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtcccaa 29 ||||||||||||||||||| ||||| Sbjct: 75404 aagaaaagaaaaagaaaagacccaa 75380
>gb|AC189974.1| Gasterosteus aculeatus clone VMRC28-91C03, complete sequence Length = 132593 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 54354 aagaaaagaaaaagaaaagtc 54334
>ref|XM_393666.3| PREDICTED: Apis mellifera similar to phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III isoform 2 (LOC410183), mRNA Length = 5961 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1279 aattatttgggaaagaaaaac 1299 ||||||||||||||||||||| Sbjct: 2774 aattatttgggaaagaaaaac 2794
>ref|XM_221185.4| PREDICTED: Rattus norvegicus similar to chromobox homolog 2 (LOC303730), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 509 atgaagaagaagaagacgacg 529
>ref|XM_001081755.1| PREDICTED: Rattus norvegicus similar to chromobox homolog 2 (LOC303730), mRNA Length = 1645 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 362 atgaagaagaagaagacgacg 382
>gb|AC171497.4| Pan troglodytes chromosome X clone PTB-121G7 map human ortholog p11.4, complete sequence Length = 227507 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 72021 tgaagaaaagaaaaagaaaag 72001
>ref|XM_001105415.1| PREDICTED: Macaca mulatta coiled-coil domain containing 2 (IFT74), mRNA Length = 2168 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtgaagaaaagaaaaagaaa 21 ||||||||||||||||||||| Sbjct: 1645 ggtgaagaaaagaaaaagaaa 1665
>gb|AC186635.1| Phycomyces blakesleeanus clone JGIBHUS-5E9, complete sequence Length = 35155 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 433 acgattatgaagaagaagaagacga 457 ||||| ||||||||||||||||||| Sbjct: 23903 acgatgatgaagaagaagaagacga 23927
>gb|AC165952.4| Mus musculus BAC clone RP23-460G24 from chromosome 14, complete sequence Length = 183416 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 atgagggtgctccctgacgca 668 ||||||||||||||||||||| Sbjct: 26163 atgagggtgctccctgacgca 26143
>ref|NM_111632.2| Arabidopsis thaliana actin binding (AT3G07540) mRNA, complete cds Length = 2857 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 733 atgaagaagaagaagacgacg 753
>gb|DQ141112.1| Tribolium castaneum Dscam gene, partial sequence Length = 33843 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 4510 tgaagaaaagaaaaagaaaag 4530
>gb|AC164602.7| Mus musculus chromosome 1, clone RP24-364G11, complete sequence Length = 205889 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 156779 gaagaaaagaaaaagaaaagt 156799
>gb|AC162163.2| Mus musculus chromosome 1, clone RP23-258N15, complete sequence Length = 176915 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 138533 gaagaaaagaaaaagaaaagt 138513
>ref|XM_867939.1| PREDICTED: Bos taurus similar to Tho2 (LOC615991), partial mRNA Length = 663 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1338 ctggatgtcattttagaagtg 1358 ||||||||||||||||||||| Sbjct: 526 ctggatgtcattttagaagtg 546
>ref|XM_591807.2| PREDICTED: Bos taurus similar to coiled-coil domain containing 2, transcript variant 1 (LOC514024), mRNA Length = 1953 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtgaagaaaagaaaaagaaa 21 ||||||||||||||||||||| Sbjct: 1549 ggtgaagaaaagaaaaagaaa 1569
>gb|AC091807.4| Homo sapiens chromosome X clone RP6-186E3 map p11.4, complete sequence Length = 172150 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 28938 tgaagaaaagaaaaagaaaag 28918
>ref|XM_716333.1| Candida albicans SC5314 hypothetical protein (CaO19_2926), mRNA Length = 2493 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 484 atgaagaagaagaagacgacg 464
>ref|XM_716061.1| Candida albicans SC5314 hypothetical protein (CaO19_10443), mRNA Length = 2493 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 484 atgaagaagaagaagacgacg 464
>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence Length = 215147 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1657 tcatgaaaacaagagaaaaaggttgactt 1685 ||||||||||||||| |||||| |||||| Sbjct: 37465 tcatgaaaacaagaggaaaaggctgactt 37437
>gb|AC102503.8| Mus musculus chromosome 16, clone RP24-383M8, complete sequence Length = 220467 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 gaagaagaagaagacgacggcaatg 465 ||||||||||| ||||||||||||| Sbjct: 114490 gaagaagaagacgacgacggcaatg 114466
>gb|AY207462.1|AY207460S3 Mus musculus aldehyde reductase (Akr1a4) gene, exons 3, 4, and partial cds Length = 1638 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtgaagaaaagaaaaagaaaa 22 ||||||||||||||||||||| Sbjct: 966 gtgaagaaaagaaaaagaaaa 986
>ref|XM_531964.2| PREDICTED: Canis familiaris similar to Coiled-coil domain containing protein 2 (Capillary morphogenesis protein-1) (CMG-1) (LOC474734), mRNA Length = 2183 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtgaagaaaagaaaaagaaa 21 ||||||||||||||||||||| Sbjct: 1677 ggtgaagaaaagaaaaagaaa 1697
>gb|AC009853.4|ATAC009853 Arabidopsis thaliana chromosome III BAC F21O3 genomic sequence, complete sequence Length = 90112 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 81559 atgaagaagaagaagacgacg 81539
>gb|AC004966.2| Homo sapiens PAC clone RP5-1107K15 from 7, complete sequence Length = 134084 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1475 ggattgtaagtgaagctcagc 1495 ||||||||||||||||||||| Sbjct: 114355 ggattgtaagtgaagctcagc 114335
>gb|AF098501.2| Caenorhabditis elegans fosmid H28G03, complete sequence Length = 44352 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 gattatgaagaagaagaagac 455 ||||||||||||||||||||| Sbjct: 37305 gattatgaagaagaagaagac 37285
>gb|U97015.1| Caenorhabditis elegans cosmid F48C1, complete sequence Length = 30783 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacggcaa 463 |||||||||||||||||| |||||| Sbjct: 6807 atgaagaagaagaagacgtcggcaa 6831
>ref|XM_388012.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07836.1) partial mRNA Length = 1887 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 1106 atgaagaagaagaagacgacg 1126
>gb|AC162382.8| Mus musculus 6 BAC RP24-398M13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200253 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 98179 tgaagaaaagaaaaagaaaag 98199
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 362 tgattatgacgacgacgttgatgat 386 ||||||||||||||||| ||||||| Sbjct: 502856 tgattatgacgacgacgatgatgat 502832
>gb|AC079906.15| Homo sapiens 12q BAC RP11-618L22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180688 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 132363 aagaaaagaaaaagaaaagtc 132343
>ref|XM_458686.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D05841g) partial mRNA Length = 1905 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 1490 atgaagaagaagaagacgacg 1510
>gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosome 9, complete sequence Length = 187558 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 91338 aagaaaagaaaaagaaaagtc 91358
>dbj|AB169310.1| Macaca fascicularis testis cDNA, clone: QtsA-18855, similar to human coiled-coil domain containing 2 (CCDC2), mRNA, RefSeq: NM_025103.1 Length = 2081 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggtgaagaaaagaaaaagaaa 21 ||||||||||||||||||||| Sbjct: 1550 ggtgaagaaaagaaaaagaaa 1570
>ref|NM_076487.2| Caenorhabditis elegans MTM (myotubularin) family member (mtm-5) (mtm-5) mRNA, complete cds Length = 5495 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 gattatgaagaagaagaagac 455 ||||||||||||||||||||| Sbjct: 4414 gattatgaagaagaagaagac 4434
>ref|NM_073812.2| Caenorhabditis elegans C44H9.4 (C44H9.4) mRNA, complete cds Length = 3478 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 435 gattatgaagaagaagaagacgacg 459 ||||| ||||||||||||||||||| Sbjct: 100 gattacgaagaagaagaagacgacg 124
>gb|AC011388.7| Homo sapiens chromosome 5 clone CTB-171P15, complete sequence Length = 73201 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtcccaactca 33 |||||||||||||||||| ||||| |||| Sbjct: 613 aagaaaagaaaaagaaaactcccagctca 585
>dbj|AK035334.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530019A01 product:unclassifiable, full insert sequence Length = 3343 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 1787 aagaaaagaaaaagaaaagtc 1767
>gb|AC060232.6| Homo sapiens chromosome 10 clone RP11-458D17, complete sequence Length = 167912 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1336 agctggatgtcattttagaag 1356 ||||||||||||||||||||| Sbjct: 58567 agctggatgtcattttagaag 58547
>gb|AC018522.7| Homo sapiens chromosome 18, clone RP11-7N19, complete sequence Length = 169578 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 76800 tgaagaaaagaaaaagaaaag 76820
>emb|Z75529.1|CEC44H9 Caenorhabditis elegans Cosmid C44H9, complete sequence Length = 28684 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 435 gattatgaagaagaagaagacgacg 459 ||||| ||||||||||||||||||| Sbjct: 8863 gattacgaagaagaagaagacgacg 8887
>gb|AC109315.3| Homo sapiens chromosome 18, clone RP11-267C16, complete sequence Length = 157966 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 37137 tgaagaaaagaaaaagaaaag 37117
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggc 461 ||||||||||||||||||||| Sbjct: 1749623 gaagaagaagaagacgacggc 1749643
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1281 ttatttgggaaagaaaaacta 1301 ||||||||||||||||||||| Sbjct: 35576169 ttatttgggaaagaaaaacta 35576149
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1250 tcatcgtggagttgtgctgtt 1270 ||||||||||||||||||||| Sbjct: 1092285 tcatcgtggagttgtgctgtt 1092265
>gb|AC104779.4| Homo sapiens BAC clone RP11-26P13 from 4, complete sequence Length = 152861 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 61527 aagaaaagaaaaagaaaagtc 61507
>gb|AC008472.8| Homo sapiens chromosome 5 clone CTC-367J11, complete sequence Length = 107733 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtcccaactca 33 |||||||||||||||||| ||||| |||| Sbjct: 15522 aagaaaagaaaaagaaaactcccagctca 15550
>gb|AC104301.2| Homo sapiens chromosome 3 clone RP11-150N22, complete sequence Length = 189610 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1367 aatgttcaagtggacatttca 1387 ||||||||||||||||||||| Sbjct: 166701 aatgttcaagtggacatttca 166681
>emb|Z84572.1|HS49J10 Human DNA sequence from clone RP1-49J10 on chromosome 13 Contains the 3' end of the gene for androgen-induced prostate proliferative shutoff associated protein (AS3) (CG008, FLJ23236, KIAA0979), complete sequence Length = 137246 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 aagaaaaagaaaagtcccaactcaa 34 ||||||||||||| ||||||||||| Sbjct: 58425 aagaaaaagaaaactcccaactcaa 58449
>gb|AC069362.12| Homo sapiens, clone RP11-745J24, complete sequence Length = 176295 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 135778 tgaagaaaagaaaaagaaaag 135798
>gb|AC087456.3| Homo sapiens chromosome 15, clone RP11-26A13, complete sequence Length = 170945 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 153473 tgaagaaaagaaaaagaaaag 153493
>emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on chromosome 1 Contains a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene and the KRTCAP2 gene for keratinocyte associated protein 2, complete sequence Length = 32360 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtcccaa 29 ||||||||||||||||||| ||||| Sbjct: 10281 aagaaaagaaaaagaaaagacccaa 10305
>emb|AL513122.7| Human DNA sequence from clone RP11-477J21 on chromosome 9 Contains the 3' end of a novel gene, a ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 2 (HO57, VATB, VPP3, Vma2, ATP6B2, ATP6B1B2 (ATP6V1B2) pseudogene, the GSN gene for gelsolin (amyloidosis, Finnish type), a novel gene (MOST2), a novel gene and two CpG islands, complete sequence Length = 108930 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 88918 gaagaaaagaaaaagaaaagt 88898
>ref|XM_683000.1| PREDICTED: Danio rerio similar to Synaptotagmin-2 (Synaptotagmin II) (SytII) (LOC559637), mRNA Length = 2091 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 tgaagaagaagaagacgacgg 460 ||||||||||||||||||||| Sbjct: 956 tgaagaagaagaagacgacgg 976
>emb|AL390071.9| Human DNA sequence from clone RP11-98D3 on chromosome 13 Contains part of the NEAB gene for neurobeachin (BCL8B FLJ10197 KIAA1544), the MAB21L1 gene for mab-21-like 1 (C. elegans) (CAGR1) and three CpG islands, complete sequence Length = 170998 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 58892 aagaaaagaaaaagaaaagtc 58912
>gb|AF446866.1|AF446866 Arabidopsis thaliana AT3g07540/F21O3_25 mRNA, complete cds Length = 2526 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 656 atgaagaagaagaagacgacg 676
>emb|AL161730.9| Human DNA sequence from clone RP11-441I5 on chromosome 9 Contains the DMRTA1 gene for DMRT-like family A1 (DMO) and a CpG island, complete sequence Length = 170066 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1336 agctggatgtcattttagaag 1356 ||||||||||||||||||||| Sbjct: 60721 agctggatgtcattttagaag 60701
>emb|AL139119.18| Human DNA sequence from clone RP11-18M11 on chromosome 10 Contains a eukaryotic translational initiation factor 2A pseudogene and part of a novel gene, complete sequence Length = 93324 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 5512 aagaaaagaaaaagaaaagtc 5532
>emb|AL138820.11| Human DNA sequence from clone RP11-380B4 on chromosome 13 Contains the 3' end of the KIAA0979 gene and part of a novel gene, complete sequence Length = 168487 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 aagaaaaagaaaagtcccaactcaa 34 ||||||||||||| ||||||||||| Sbjct: 57907 aagaaaaagaaaactcccaactcaa 57931
>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC Library) complete sequence Length = 148984 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 gaagaagaagaagacgacggcaatg 465 ||||||||||||||||||| ||||| Sbjct: 109884 gaagaagaagaagacgacgacaatg 109860
>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete sequence Length = 150294 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 148970 aagaaaagaaaaagaaaagtc 148990
>gb|AY050396.1| Arabidopsis thaliana AT3g07540/F21O3_25 mRNA, complete cds Length = 2788 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 733 atgaagaagaagaagacgacg 753
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 419112 atgaagaagaagaagacgacg 419092
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gtgaagaaaagaaaaagaaaa 22 ||||||||||||||||||||| Sbjct: 561356 gtgaagaaaagaaaaagaaaa 561376
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggcaatg 465 ||||||||||||||||||| ||||| Sbjct: 44874 gaagaagaagaagacgacgacaatg 44898
>emb|AL954353.14| Mouse DNA sequence from clone RP23-156D8 on chromosome 11 Contains a pseudogene similar to part of striatin (calmodulin binding protein) (Strn), complete sequence Length = 188920 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 153759 aagaaaagaaaaagaaaagtc 153779
>gb|AC114733.4| Homo sapiens BAC clone RP13-1014F16 from 4, complete sequence Length = 51083 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 33681 aagaaaagaaaaagaaaagtc 33701
>gb|AC124730.5| Mus musculus chromosome 5 clone RP23-286M3, complete sequence Length = 194040 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 153591 gaagaaaagaaaaagaaaagt 153571
>gb|AC027688.5| Homo sapiens chromosome 16 clone RP11-883G14, complete sequence Length = 177147 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 20831 tgaagaaaagaaaaagaaaag 20851
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggc 461 ||||||||||||||||||||| Sbjct: 31984 gaagaagaagaagacgacggc 32004
>gb|AC078931.9|AC078931 Mus musculus BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188750 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 142485 aagaaaagaaaaagaaaagtc 142505
>gb|AC025810.5| Homo sapiens chromosome 16 clone CTD-2034I21, complete sequence Length = 71530 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 4578 tgaagaaaagaaaaagaaaag 4558
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1281 ttatttgggaaagaaaaacta 1301 ||||||||||||||||||||| Sbjct: 92561 ttatttgggaaagaaaaacta 92541
>gb|AC006305.3| Homo sapiens chromosome 18, clone RP11-456O19, complete sequence Length = 178261 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 175338 gaagaaaagaaaaagaaaagt 175358
>gb|AC068762.15| Homo sapiens 3 BAC RP11-215N17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152541 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gaaaagaaaaagaaaagtccc 27 ||||||||||||||||||||| Sbjct: 125069 gaaaagaaaaagaaaagtccc 125089
>dbj|BS000031.1| Pan troglodytes chromosome 22 clone:PTB-082B23, map 22, complete sequences Length = 218696 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 212023 aagaaaagaaaaagaaaagtc 212003
>dbj|AB164414.1| Hemicentrotus pulcherrimus mRNA for unichrom, complete cds Length = 5115 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 430 gcaacgattatgaagaagaagaaga 454 |||| |||||||||||||||||||| Sbjct: 3386 gcaatgattatgaagaagaagaaga 3410
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 gaagaagaagaagacgacggc 461 ||||||||||||||||||||| Sbjct: 149123 gaagaagaagaagacgacggc 149143
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1250 tcatcgtggagttgtgctgtt 1270 ||||||||||||||||||||| Sbjct: 112502 tcatcgtggagttgtgctgtt 112482
>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete sequence Length = 173411 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 2876 aagaaaagaaaaagaaaagtc 2896
>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139613 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 tatatattggatcaggcttta 989 ||||||||||||||||||||| Sbjct: 12399 tatatattggatcaggcttta 12419
>gb|AC154007.6| Mus musculus 6 BAC RP24-484F15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 169935 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 969 tatatattggatcaggcttta 989 ||||||||||||||||||||| Sbjct: 127095 tatatattggatcaggcttta 127115
>gb|AC091100.14| Homo sapiens chromosome 15, clone RP11-593F23, complete sequence Length = 180227 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tgaagaaaagaaaaagaaaag 23 ||||||||||||||||||||| Sbjct: 179163 tgaagaaaagaaaaagaaaag 179143
>dbj|AK102865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111K19, full insert sequence Length = 2113 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1250 tcatcgtggagttgtgctgtt 1270 ||||||||||||||||||||| Sbjct: 233 tcatcgtggagttgtgctgtt 253
>emb|BX823833.1|CNS0A7VW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1653 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 atgaagaagaagaagacgacg 459 ||||||||||||||||||||| Sbjct: 692 atgaagaagaagaagacgacg 712
>gb|AC122474.5| Mus musculus chromosome 1 clone RP24-331M14, complete sequence Length = 176800 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 35287 aagaaaagaaaaagaaaagtc 35267
>gb|AC090015.6| Homo sapiens 12 BAC RP11-711C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186236 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1518 cattggctgaaagcctgaagctcat 1542 |||||||||| |||||||||||||| Sbjct: 108832 cattggctgagagcctgaagctcat 108856
>emb|X84804.1|HSHOX1X1B H.sapiens HOX1.1 gene, exon 2 Length = 404 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 433 acgattatgaagaagaagaagacga 457 |||||||||||||||| |||||||| Sbjct: 280 acgattatgaagaagaggaagacga 304
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 gaagaagaagacgacggcaat 464 ||||||||||||||||||||| Sbjct: 3214002 gaagaagaagacgacggcaat 3214022
>emb|CT573043.10| Mouse DNA sequence from clone RP23-24G19 on chromosome 17, complete sequence Length = 93027 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 57072 aagaaaagaaaaagaaaagtc 57052
>gb|AC134588.5| Mus musculus BAC clone RP23-314N18 from 14, complete sequence Length = 178957 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 648 atgagggtgctccctgacgca 668 ||||||||||||||||||||| Sbjct: 58577 atgagggtgctccctgacgca 58597
>gb|AC131697.4| Mus musculus BAC clone RP23-407K12 from 1, complete sequence Length = 199589 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aagaaaagaaaaagaaaagtc 25 ||||||||||||||||||||| Sbjct: 150127 aagaaaagaaaaagaaaagtc 150107
>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence Length = 194931 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 193529 gaagaaaagaaaaagaaaagt 193549
>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete sequence Length = 202412 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1276 acaaattatttgggaaagaaa 1296 ||||||||||||||||||||| Sbjct: 165505 acaaattatttgggaaagaaa 165525
>emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chromosome 2, complete sequence Length = 153445 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 71622 gaagaaaagaaaaagaaaagt 71642
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtgaagaaaagaaaaagaaaa 22 ||||||||||||||||||||| Sbjct: 15275 gtgaagaaaagaaaaagaaaa 15255
>gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, complete sequence Length = 215819 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1010 aaagaaggaaggggatgaatc 1030 ||||||||||||||||||||| Sbjct: 81354 aaagaaggaaggggatgaatc 81334
>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete sequence Length = 205838 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gaagaaaagaaaaagaaaagt 24 ||||||||||||||||||||| Sbjct: 133848 gaagaaaagaaaaagaaaagt 133868
>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence Length = 198038 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1105 ggatttctggtgataattgca 1125 ||||||||||||||||||||| Sbjct: 95656 ggatttctggtgataattgca 95636 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 323,510,470 Number of extensions: 19295891 Number of successful extensions: 1168356 Number of sequences better than 10.0: 143 Number of HSP's gapped: 1168354 Number of HSP's successfully gapped: 146 Length of query: 1711 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1688 Effective length of database: 18,503,978,556 Effective search space: 31234715802528 Effective search space used: 31234715802528 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
