ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45d04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100414:Os04g0602900 | 270 | 1e-72 | 2 | AK065982:Os04g0602900 | 135 | 4e-32 | 3 | AK099624:Os08g0457600 | 32 | 0.75 | 4 | AK065020:Os08g0457600 | 32 | 0.75 | 5 | AB095096:Os08g0457600 | 32 | 0.75 | 6 | AK106299:Os12g0577900 | 32 | 0.98 | 7 | AK065438:Os01g0848900 | 31 | 1.3 | 8 | AK071314:Os03g0576900 | 31 | 1.7 | 9 | AK107461:Os01g0274800 | 30 | 2.9 | 10 | AK100254:Os03g0661500 | 30 | 2.9 | 11 | AK100493:Os05g0519200 | 30 | 3.7 | 12 | AK068419:Os05g0519200 | 30 | 3.7 | 13 | AK067065:Os05g0519200 | 30 | 3.7 | 14 | Os11g0514100:Os11g0514100 | 29 | 4.9 | 15 | AK103264:Os03g0816100 | 29 | 6.4 | 16 | Os04g0196500:Os04g0196500 | 28 | 8.3 | 17 | AF017357: | 28 | 8.3 | 18 | AK109142:Os02g0734800 | 28 | 8.3 | 19 | AK066216:Os03g0708400 | 28 | 8.3 |
|---|
>AK100414:Os04g0602900 | Length = 156 Score = 270 bits (691), Expect = 1e-72 Identities = 126/153 (82%), Positives = 142/153 (92%) Frame = +2 Query: 200 SLLISKQYVLAMSFAMAEHLTESLFFPEIKGYLFVSNIGLLMVLFGEIIRKIAVVTAGRA 379 +LLISKQYVLAMSFAM EHLTE+L FPE+K Y FVS +GL+MV+ GE+IRK+AVVTAGR+ Sbjct: 3 ALLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRS 62 Query: 380 FTHVIRIQYEDQHQLVTHGIYRFMRHPGYSGFLLWAVGTQVMLCNPVSTVLFALVLWRFF 559 FTHVIRI YEDQH+L+THG+YR MRHPGYSGFL+WAVGTQVMLCNP+STV F LVLWRFF Sbjct: 63 FTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFF 122 Query: 560 SKRIPYEEFFLRQFFGSQYEEYARKVHSGLPFI 658 SKRIPYEEFFLRQFFG +YEEYA+KVHSGLPFI Sbjct: 123 SKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFI 155
>AK065982:Os04g0602900 | Length = 90 Score = 135 bits (341), Expect = 4e-32 Identities = 63/89 (70%), Positives = 79/89 (88%) Frame = +2 Query: 179 HRNVTATSLLISKQYVLAMSFAMAEHLTESLFFPEIKGYLFVSNIGLLMVLFGEIIRKIA 358 +++ + +LLISKQYVLAMSFAM EHLTE+L FPE+K Y FVS +GL+MV+ GE+IRK+A Sbjct: 2 NKSTSHAALLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLA 61 Query: 359 VVTAGRAFTHVIRIQYEDQHQLVTHGIYR 445 VVTAGR+FTHVIRI YEDQH+L+THG+YR Sbjct: 62 VVTAGRSFTHVIRIHYEDQHKLITHGVYR 90
>AK099624:Os08g0457600 | Length = 718 Score = 32.0 bits (71), Expect = 0.75 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 21 HLFPLPKSRAPAEAPVSRSPLCPWRRGHRRGSL 119 H P+P +PA +P SRSP W G R L Sbjct: 115 HHSPVPLFHSPASSPASRSPSASWLAGRERERL 147
>AK065020:Os08g0457600 | Length = 718 Score = 32.0 bits (71), Expect = 0.75 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 21 HLFPLPKSRAPAEAPVSRSPLCPWRRGHRRGSL 119 H P+P +PA +P SRSP W G R L Sbjct: 115 HHSPVPLFHSPASSPASRSPSASWLAGRERERL 147
>AB095096:Os08g0457600 | Length = 718 Score = 32.0 bits (71), Expect = 0.75 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 21 HLFPLPKSRAPAEAPVSRSPLCPWRRGHRRGSL 119 H P+P +PA +P SRSP W G R L Sbjct: 115 HHSPVPLFHSPASSPASRSPSASWLAGRERERL 147
>AK106299:Os12g0577900 | Length = 357 Score = 31.6 bits (70), Expect = 0.98 Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Frame = -2 Query: 784 NP*HSLLVWHLLS--PCCKVISLDMSMMRTEGGKRYFVSLKHSVYKW*PRVHFPCIFFIL 611 +P H +L HL+ P ++L +++ R R+ + L+H++ + R+H PC+ + Sbjct: 44 SPCHQVLARHLVKDHPSHLQVTL-LAVTRNHRRPRHDIPLRHALKQLESRLHLPCLCVAI 102 Query: 610 RAKKLPQEKFFIWYPL*KETP 548 + ++P + +W+ L K+ P Sbjct: 103 Q-DRVPAHRVLLWH-LVKQLP 121
>AK065438:Os01g0848900 | Length = 190 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 43 PEPQRKLRSPDPRSAHGGAGTGVAVCGRPGPLPRL 147 P+P + + PR+A GG G G A G PL L Sbjct: 44 PQPNVETKKSPPRAAAGGGGGGTAAVGGESPLSSL 78
>AK071314:Os03g0576900 | Length = 550 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Frame = +1 Query: 13 TPSISSRCPSPEPQRKLRS------PDPRSAHGGAGTGVA 114 +PS+ + CPSP P +L PD R GAG G A Sbjct: 7 SPSVVALCPSPLPSSRLPGSVLSCWPDSRGIRRGAGEGTA 46
>AK107461:Os01g0274800 | Length = 205 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 7/51 (13%) Frame = +1 Query: 4 TSPTPSISSRCPSPEP-------QRKLRSPDPRSAHGGAGTGVAVCGRPGP 135 +SP PS ++ P P P +R+ RSP RS GT + G P Sbjct: 63 SSPAPSAAASLPPPPPPPPPPPRRRRRRSPSSRSTTTTTGTRSSTAGTAAP 113
>AK100254:Os03g0661500 | Length = 427 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +1 Query: 7 SPTPSISSRCPSPEPQRKLRSPDPRSAHGGAGTGVAVCGRPGPLPRL 147 SP+PS S PSP PQ P P S A V+ +P P P L Sbjct: 70 SPSPSPS---PSPPPQPSSPPPPPPSPPPAAAVSVSPPTQPRPRPEL 113
>AK100493:Os05g0519200 | Length = 246 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +2 Query: 518 VSTVLFALVLWRFFSKRIPYEE 583 V F LVLW FS IPYEE Sbjct: 118 VDVYSFGLVLWELFSGSIPYEE 139
>AK068419:Os05g0519200 | Length = 246 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +2 Query: 518 VSTVLFALVLWRFFSKRIPYEE 583 V F LVLW FS IPYEE Sbjct: 118 VDVYSFGLVLWELFSGSIPYEE 139
>AK067065:Os05g0519200 | Length = 604 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +2 Query: 518 VSTVLFALVLWRFFSKRIPYEE 583 V F LVLW FS IPYEE Sbjct: 476 VDVYSFGLVLWELFSGSIPYEE 497
>Os11g0514100:Os11g0514100 | Length = 1674 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -2 Query: 601 KLPQEKFFIWYPL*KETPQHQCK*NCRY 518 KLPQE FIWYP + + NC Y Sbjct: 1478 KLPQESIFIWYPPASLPYMSRARFNCIY 1505
>AK103264:Os03g0816100 | Length = 286 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 434 GIYRFMRHPGYSGFLLWAVGTQVMLCNPVSTVLFALVLWRFFSKRIPYE 580 G YR+M YS L G + N V F +VLW + ++P+E Sbjct: 220 GTYRWMAPELYSTVTLQR-GEKKHYTNKVDVYSFGIVLWELLTNKMPFE 267
>Os04g0196500:Os04g0196500 | Length = 1449 Score = 28.5 bits (62), Expect = 8.3 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 10 PTPSISSRCPSPEPQRKLRSPDP-RSAHGGAG 102 PTP +S SP P+R+ RSP P R HGG G Sbjct: 4 PTPRVSH---SP-PRRRWRSPSPRRGRHGGRG 31
>AF017357: | Length = 168 Score = 28.5 bits (62), Expect = 8.3 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1 Query: 1 GTSPTPSISSRCPSPEPQRKLRSPDPRSAHGGAGTGVAVCGRPG 132 GT+PTPS S+ P +P + GAGT G G Sbjct: 68 GTTPTPSPSAAAPKAKPAANTNCGTCWRSRAGAGTDQRAAGDGG 111
>AK109142:Os02g0734800 | Length = 278 Score = 28.5 bits (62), Expect = 8.3 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = +1 Query: 379 LYTCYTDSV*RPASVGNSWNL*IYAASWVFRLSSMGSWNTGYAVQSSIYSFICIGAVAFL 558 +Y C +D PASV S + RLSS+ +W TG AVQ F+ G FL Sbjct: 83 VYQCRSDL---PASVCTGC-----VRSAISRLSSLCAWATGGAVQLRA-CFVRYGNDTFL 133 Query: 559 FKADT 573 K DT Sbjct: 134 GKQDT 138
>AK066216:Os03g0708400 | Length = 291 Score = 28.5 bits (62), Expect = 8.3 Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 7/98 (7%) Frame = +2 Query: 434 GIYRFMRHPGYSG--FLLWA--VGTQVMLCNPVSTVLFA---LVLWRFFSKRIPYEEFFL 592 G++ + RHP Y G FL W V + +L V+ L L F IP E Sbjct: 176 GLWSYTRHPNYFGEIFLWWGIFVASTPVLSGAEWLVILGPVFLTLLLLFVSGIPLLEASA 235 Query: 593 RQFFGSQYEEYARKVHSGLPFIN*MFQTYKVTLTPFCP 706 + FG Q EEY +TYK T +P P Sbjct: 236 DKRFG-QNEEY---------------RTYKNTTSPLIP 257 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,801,665 Number of extensions: 773564 Number of successful extensions: 3049 Number of sequences better than 10.0: 19 Number of HSP's gapped: 3029 Number of HSP's successfully gapped: 19 Length of query: 351 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 249 Effective length of database: 11,315,673 Effective search space: 2817602577 Effective search space used: 2817602577 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
