ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42g13 |
|---|---|
| Clone Library Name | barley_pub |
>D78504:Os01g0158000 | Length = 528 Score = 136 bits (343), Expect = 1e-32 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 3/101 (2%) Frame = +1 Query: 130 MADGNAPGSP--ASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAP 303 MAD +A SP AS LQ HR A+KSSV NTAASRRREQAIAIGKERREAL+RAKRVCRAP Sbjct: 1 MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP 60 Query: 304 LSGNDEATIEDGDMVID-EKADIETRTAQAVEELKSALSSQ 423 +SG+DEA +E+GDMV+D EKA +E +TA AVEELKSALS Q Sbjct: 61 ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQ 101
>AK103127:Os01g0158000 | Length = 528 Score = 136 bits (343), Expect = 1e-32 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 3/101 (2%) Frame = +1 Query: 130 MADGNAPGSP--ASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAP 303 MAD +A SP AS LQ HR A+KSSV NTAASRRREQAIAIGKERREAL+RAKRVCRAP Sbjct: 1 MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP 60 Query: 304 LSGNDEATIEDGDMVID-EKADIETRTAQAVEELKSALSSQ 423 +SG+DEA +E+GDMV+D EKA +E +TA AVEELKSALS Q Sbjct: 61 ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQ 101
>AK058679:Os01g0158000 | Length = 528 Score = 136 bits (343), Expect = 1e-32 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 3/101 (2%) Frame = +1 Query: 130 MADGNAPGSP--ASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAP 303 MAD +A SP AS LQ HR A+KSSV NTAASRRREQAIAIGKERREAL+RAKRVCRAP Sbjct: 1 MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP 60 Query: 304 LSGNDEATIEDGDMVID-EKADIETRTAQAVEELKSALSSQ 423 +SG+DEA +E+GDMV+D EKA +E +TA AVEELKSALS Q Sbjct: 61 ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQ 101
>AK109998: | Length = 774 Score = 33.5 bits (75), Expect = 0.13 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +3 Query: 60 PVPGLVRSYHH--RASQPSSSAAVNDGRRQRPRLAGFFATEPPLRHQ 194 P+P + SYHH AS SS+++++D RQ P PPL H+ Sbjct: 55 PMPTRLHSYHHPISASYASSNSSLHDRNRQPPPPLWHEHRSPPLEHR 101
>AK107263:Os04g0309500 | Length = 209 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/44 (43%), Positives = 21/44 (47%) Frame = +3 Query: 93 RASQPSSSAAVNDGRRQRPRLAGFFATEPPLRHQVLSAQYGS*P 224 R +PSSS A GRR+RP L T PP AQ G P Sbjct: 109 RWRRPSSSLAAGAGRRRRPSLEEAGGTPPPAARHTEEAQAGDRP 152
>AK059229:Os01g0802700 | Length = 426 Score = 32.3 bits (72), Expect = 0.30 Identities = 30/97 (30%), Positives = 46/97 (47%) Frame = +1 Query: 100 RSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMR 279 RS APPP ++G+A SP+S +++ A ++ + AA R +E A+ I E Sbjct: 173 RSASAPPP-ASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVAVNI-----EITEM 226 Query: 280 AKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQA 390 A R +SG E T ++ E A +E A A Sbjct: 227 AASTARDGVSG--ETTAAAKEVSSGEVAPVEEEEASA 261
>AK073713:Os02g0712400 | Length = 294 Score = 31.2 bits (69), Expect = 0.67 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -3 Query: 167 EEAGEPGALPSAIVYGGGARRLRGSVMIGTDQTGDG 60 EE GEP +A+ G G R+ G V +G + GDG Sbjct: 71 EEEGEPVVGEAALGGGAGGGRVEGGVDVGEEGVGDG 106
>AK109197:Os10g0214400 | Length = 165 Score = 30.4 bits (67), Expect = 1.2 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 1/123 (0%) Frame = +1 Query: 58 APSPVWSVPIITEPRSRRAPP-P*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRRE 234 +PSP W PR RR+PP P + + +S++ + S N +++E Sbjct: 42 SPSPRWERSQSPTPRRRRSPPSPRRQRRRRSRSNTSSTVNNSCSPSHVSEQNNLIEKQKE 101 Query: 235 QAIAIGKERREALMRAKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQAVEELKSAL 414 + +++ L + + + +ED D K +I+ R + +++L + Sbjct: 102 EGDKKRRQKEAELKLLEEELARRVEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDEV 161 Query: 415 SSQ 423 +Q Sbjct: 162 DAQ 164
>AK065751: | Length = 111 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Frame = +3 Query: 93 RASQPSSSAAVNDGRRQRPRLAGFFATEPPLR------HQVLSAQYGS 218 R S+ S RRQR R AG+ A EPP R ++ +A Y S Sbjct: 8 RRSRHDQSRRSYASRRQRQRAAGYLAAEPPRRRCSFMANEAATASYSS 55
>Os07g0588300:Os07g0588300 | Length = 648 Score = 30.0 bits (66), Expect = 1.5 Identities = 23/70 (32%), Positives = 33/70 (47%) Frame = +1 Query: 55 SAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRRE 234 S+P+P PI E R+R+A GSP+S HR S++ A+ RR Sbjct: 169 SSPTP----PIPGERRARQA---------GGGGSPSSISYRHRSRSISNLSEAGAAARRS 215 Query: 235 QAIAIGKERR 264 A +GK R+ Sbjct: 216 GAAVLGKLRK 225
>Os03g0624900:Os03g0624900 | Length = 164 Score = 30.0 bits (66), Expect = 1.5 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = +1 Query: 31 PTVRSCLVSAPSPVWSVPIITEPRSRRAP--PP*TMADGNAPGSPASSLQSHRYAIKSSV 204 P RS L +AP PV + P T P P PP D NAP + A S+ + + + Sbjct: 39 PPTRS-LATAPMPVATSPTATSPSPMVPPPTPPTDAPDANAPSTLAPSVVTSTASAPTGA 97 Query: 205 HNTAASRRREQAIAIGKE 258 ++++ A +G E Sbjct: 98 PVSSSAFTTTDAPIVGME 115
>Os01g0132500:Os01g0132500 | Length = 396 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +1 Query: 4 DKTELSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHR 183 + E+ T + R+ +V+A ++ I EP PPP +ADG A A+S H+ Sbjct: 98 ESEEVWVTAASTRAFVVAALPAAAAMVISAEPHP--PPPPDPVADGAAAVEAAASSARHQ 155 Query: 184 YAIKSS 201 A+ SS Sbjct: 156 AAVLSS 161
>AK100339:Os10g0104800 | Length = 568 Score = 29.3 bits (64), Expect = 2.6 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +1 Query: 34 TVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAP----GSPASSLQSHRYAIKSS 201 + S SAPSP S+ P S +PPP A NAP G +SS Q+ + SS Sbjct: 11 SANSTTPSAPSPSSSLSKSPSPPSPSSPPP--PASTNAPPKSAGGVSSSTQAQPSSESSS 68 Query: 202 VHNTAASRRREQ 237 T S E+ Sbjct: 69 ESTTTPSAPAER 80
>AK071821:Os10g0104800 | Length = 568 Score = 29.3 bits (64), Expect = 2.6 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +1 Query: 34 TVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAP----GSPASSLQSHRYAIKSS 201 + S SAPSP S+ P S +PPP A NAP G +SS Q+ + SS Sbjct: 11 SANSTTPSAPSPSSSLSKSPSPPSPSSPPP--PASTNAPPKSAGGVSSSTQAQPSSESSS 68 Query: 202 VHNTAASRRREQ 237 T S E+ Sbjct: 69 ESTTTPSAPAER 80
>AK070025:Os08g0479300 | Length = 383 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 251 PIAIACSRLRLAAVLCTEDLMA*RWLCSEEAGEPGALPSAIVYGGGARRLRGSVMI--GT 78 P + +C + +LC ED + WL +E GE G S GG R + G + G Sbjct: 3 PSSSSCHDAAASMLLCAEDNSSILWL-EDEEGEVGERRS-----GGCRSMVGDLAAGGGG 56 Query: 77 DQTGDGAETKQD 42 G G E ++D Sbjct: 57 GSGGGGVEEEED 68
>Os02g0460000:Os02g0460000 | Length = 1246 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/58 (34%), Positives = 25/58 (43%) Frame = +1 Query: 10 TELSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHR 183 T S +R R+C+ S W VPI+ A PP T+A S S L HR Sbjct: 771 TSASPSRACSRACMTSCDHVRWRVPIVL------ALPPNTLAADALLFSHGSDLVRHR 822
>AK109917:Os01g0588000 | Length = 269 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/68 (26%), Positives = 26/68 (38%) Frame = +1 Query: 100 RSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMR 279 R ++ PP A AP PA+ + + H SR ++ I + R A Sbjct: 147 REKKEEPPKATAPAAAPPQPAARERHDEEEKARAEHKARLSREADRRIEAARARLAAQQA 206 Query: 280 AKRVCRAP 303 A R AP Sbjct: 207 ASRPAPAP 214
>AK103954:Os02g0769900 | Length = 520 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 190 WRSGGSVAKKPASRGRCRRPSFTAAELDG 104 W G V +RG +RP ++A E+DG Sbjct: 448 WDGAGKVRSLMKARGLRKRPGYSAVEIDG 476
>AK101222:Os05g0121800 | Length = 613 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 12/73 (16%) Frame = +1 Query: 139 GNAPG-------SPASSLQSHRYAIKSSVHNTAASRRR-----EQAIAIGKERREALMRA 282 G APG P S R A + V S+ R Q A GK+R +A ++ Sbjct: 170 GKAPGVTAVISKPPKSKANVPRVAARKGVDLMPQSKIRAPISTSQGAAGGKQRIQATLKE 229 Query: 283 KRVCRAPLSGNDE 321 R P+SG+ E Sbjct: 230 PTTARVPISGSTE 242
>AK073145:Os02g0769900 | Length = 462 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 190 WRSGGSVAKKPASRGRCRRPSFTAAELDG 104 W G V +RG +RP ++A E+DG Sbjct: 390 WDGAGKVRSLMKARGLRKRPGYSAVEIDG 418
>AK072755:Os02g0769900 | Length = 527 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 190 WRSGGSVAKKPASRGRCRRPSFTAAELDG 104 W G V +RG +RP ++A E+DG Sbjct: 455 WDGAGKVRSLMKARGLRKRPGYSAVEIDG 483
>Os12g0117800:Os12g0117800 | Length = 465 Score = 27.7 bits (60), Expect = 7.5 Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 4/87 (4%) Frame = +1 Query: 64 SPVWSVPIITEPRSRR----APPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRR 231 SPVW RSRR APP + A +AP P+SS S A T +RR Sbjct: 330 SPVW-----WGRRSRRRSCAAPPRRSRARRSAPPPPSSSSSSSPTATGQRTRATMPLQRR 384 Query: 232 EQAIAIGKERREALMRAKRVCRAPLSG 312 +ERR R R R L G Sbjct: 385 SGV----RERRCRRSRRHRGARRGLRG 407
>Os10g0114400:Os10g0114400 | Length = 1110 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 250 GKERREALMRAKRVCRAPLSGNDEATIEDGDMV 348 G+ AL +CR LSGN E ++ GD+V Sbjct: 77 GRAELAALSGLDTLCRLNLSGNGELHVDAGDLV 109
>AK121995:Os03g0587200 | Length = 1129 Score = 27.7 bits (60), Expect = 7.5 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = +1 Query: 97 PRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERR--EA 270 P A PP + A N+ +P +S +S + S+ + A+ EQA A E + Sbjct: 41 PNLAAASPPMSPAAKNSSAAPGASPRSSKPVPTSAAPPSKAAAEGEQASAPANEAPAVKV 100 Query: 271 LMRAKRVCRAPLSGND 318 ++R + P+ G D Sbjct: 101 VVRVRPTVSRPVDGKD 116
>AK099276:Os03g0568800 | Length = 675 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +1 Query: 31 PTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHR 183 P V S VS+P P + P P S+ PPP + P + +S+ SH+ Sbjct: 82 PPVASPSVSSPPPAPTTPPSPPPPSKSPPPP------SPPPTTSSTPPSHQ 126
>AK070389:Os03g0568800 | Length = 675 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +1 Query: 31 PTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHR 183 P V S VS+P P + P P S+ PPP + P + +S+ SH+ Sbjct: 82 PPVASPSVSSPPPAPTTPPSPPPPSKSPPPP------SPPPTTSSTPPSHQ 126
>AK067872:Os11g0607100 | Length = 671 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +1 Query: 31 PTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHN 210 P + + +S PSP PPP DG APG P + A +V + Sbjct: 22 PPLSTAAISTPSP--------------PPPPDATLDGAAPGDPGALAPDDAIASLPTVAD 67 Query: 211 TAAS 222 +A S Sbjct: 68 SAGS 71
>AK106489:Os06g0273700 | Length = 468 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/64 (29%), Positives = 27/64 (42%) Frame = -3 Query: 305 SGARHTRFARIKASLLSFPIAIACSRLRLAAVLCTEDLMA*RWLCSEEAGEPGALPSAIV 126 +GAR TR A + S P +A AA L + RW + + G A +A+ Sbjct: 40 AGARRTRHAVAAKATTSVPALVALLFFFAAATFSVFSLGSFRWPGAADDGGAAACDAALA 99 Query: 125 YGGG 114 G G Sbjct: 100 RGRG 103
>Os02g0634400:Os02g0634400 | Length = 183 Score = 27.3 bits (59), Expect = 9.7 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Frame = +1 Query: 103 SRRAP-PP*TMADGNAPG--SPASSLQSHRYAIKSSVH---NTAASRRREQAIAIGKERR 264 SRR P PP AP SP+ S +SHR+ + SS H S R A A G R Sbjct: 85 SRRRPHPPALPPSPPAPACRSPSLSRRSHRHRLPSSSHCDELPPPSPARPPAAAAGCRHR 144 Query: 265 EALMRAKRVCRAPLSGNDEATI 330 + ++R ++ DE ++ Sbjct: 145 QPPSLSRRSPKSMREREDEESM 166
>AK108934: | Length = 662 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +1 Query: 58 APSPVWSVPII-TEPRSRRAPPP*TMADGNAPGSP 159 AP+P ++P + +P S+ PPP G P SP Sbjct: 142 APAPAAAIPAVELQPISKPPPPPVAATGGAPPPSP 176
>AK106223:Os01g0636100 | Length = 150 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 55 SAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHR 183 S P+P + P+ PR R PP ++ SP +S HR Sbjct: 4 SHPNPTKNSPLTNNPRGARRRPPSGCYPSSSLPSPCASSWRHR 46
>AK066688:Os08g0109300 | Length = 290 Score = 27.3 bits (59), Expect = 9.7 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 6/120 (5%) Frame = +1 Query: 16 LSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIK 195 LS RPTVR L PSP S + + R P T + P + + +K Sbjct: 16 LSAERPTVRGGLFLPPSPATSRSLRLQSARRCGISPATRKPRSLPRAAKVVVAVKADPLK 75 Query: 196 SSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDE------ATIEDGDMVIDE 357 + AS + Q I + + A + RA ++ E +E G +V DE Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135
>AK061825:Os08g0109300 | Length = 290 Score = 27.3 bits (59), Expect = 9.7 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 6/120 (5%) Frame = +1 Query: 16 LSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIK 195 LS RPTVR L PSP S + + R P T + P + + +K Sbjct: 16 LSAERPTVRGGLFLPPSPATSRSLRLQSARRCGISPATRKPRSLPRAAKVVVAVKADPLK 75 Query: 196 SSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDE------ATIEDGDMVIDE 357 + AS + Q I + + A + RA ++ E +E G +V DE Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,263,049 Number of extensions: 485766 Number of successful extensions: 1780 Number of sequences better than 10.0: 33 Number of HSP's gapped: 1773 Number of HSP's successfully gapped: 33 Length of query: 226 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 129 Effective length of database: 11,515,878 Effective search space: 1485548262 Effective search space used: 1485548262 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
