| Clone Name | FLbaf42g13 |
|---|---|
| Clone Library Name | barley_pub |
>Q9FYP9:IMA2_ORYSJ Importin subunit alpha-2 - Oryza sativa subsp. japonica (Rice)| Length = 528 Score = 136 bits (343), Expect = 6e-32 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 3/101 (2%) Frame = +1 Query: 130 MADGNAPGSP--ASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAP 303 MAD +A SP AS LQ HR A+KSSV NTAASRRREQAIAIGKERREAL+RAKRVCRAP Sbjct: 1 MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP 60 Query: 304 LSGNDEATIEDGDMVID-EKADIETRTAQAVEELKSALSSQ 423 +SG+DEA +E+GDMV+D EKA +E +TA AVEELKSALS Q Sbjct: 61 ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQ 101
>P37288:V1AR_HUMAN Vasopressin V1a receptor - Homo sapiens (Human)| Length = 418 Score = 35.0 bits (79), Expect = 0.26 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +1 Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFSLSLTHLIILDSRNICCH 648 FV++ Y +CW FI+ +W ++ W E + ++T +L S N CC+ Sbjct: 294 FVIVTAYIVCWAPFFIIQMWSVW-DPMSVWTESENPTITITALLGSLNSCCN 344
>Q72LH0:KCY_THET2 Cytidylate kinase - Thermus thermophilus (strain HB27 / ATCC| BAA-163 / DSM 7039) Length = 208 Score = 35.0 bits (79), Expect = 0.26 Identities = 27/103 (26%), Positives = 46/103 (44%) Frame = +1 Query: 49 LVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRR 228 +VSA + + V R + PPP +A+G G+ +H++ + +S A R Sbjct: 96 VVSAVARLPGVRAWVNRRLKEVPPP-FVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRA 154 Query: 229 REQAIAIGKERREALMRAKRVCRAPLSGNDEATIEDGDMVIDE 357 RE+ A + R+ L R +R D ++ G M +DE Sbjct: 155 RERPQAYEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDE 197
>Q810W9:WHRN_RAT Whirlin - Rattus norvegicus (Rat)| Length = 920 Score = 33.1 bits (74), Expect = 0.99 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +1 Query: 16 LSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIK 195 L +TR VR S S + + PR+R PPP +A PG P+S+ S I Sbjct: 606 LGQTRKPVREDSAPLSSAAHSGIVFSAPRNRSPPPPPGIAPTPTPG-PSSARDSPSSPIY 664 Query: 196 SSVHNTAASRRR 231 +S+ + S R+ Sbjct: 665 ASISHANPSSRK 676
>P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococcus xanthus| Length = 777 Score = 32.7 bits (73), Expect = 1.3 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Frame = +1 Query: 61 PSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQA 240 P+PV + P++T P + APP A P + A + +A ++ H AA R E+A Sbjct: 147 PAPV-AAPVVT-PAAVAAPPAPVQAPVAPPPTQAPVAEPGAHAAAAAPHPAAAHGRDEEA 204 Query: 241 IAIGKERREALMRAKRVCRAPLSGNDEATIEDGDMVIDE-KADIETRTAQAVEELKSALS 417 + K A R R + D + GD++++ + + + +A+ E S L Sbjct: 205 PSAAKS-----AVADRSIRVNVEVLDALGLLAGDLLVESARGRLRSSETEALFERFSRLG 259 Query: 418 SQYVR 432 +++R Sbjct: 260 DRFLR 264
>Q5VQY3:PIN5_ORYSJ Probable auxin efflux carrier component 5 - Oryza sativa subsp.| japonica (Rice) Length = 426 Score = 32.3 bits (72), Expect = 1.7 Identities = 30/97 (30%), Positives = 46/97 (47%) Frame = +1 Query: 100 RSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMR 279 RS APPP ++G+A SP+S +++ A ++ + AA R +E A+ I E Sbjct: 173 RSASAPPP-ASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVAVNI-----EITEM 226 Query: 280 AKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQA 390 A R +SG E T ++ E A +E A A Sbjct: 227 AASTARDGVSG--ETTAAAKEVSSGEVAPVEEEEASA 261
>Q90352:AVT_CATCO [Arg8]-vasotocin receptor - Catostomus commersoni (White sucker)| Length = 434 Score = 31.6 bits (70), Expect = 2.9 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Frame = +1 Query: 496 VVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFS------LSLTHLIILDSRNICCH 648 V++L Y +CW FI + +W V W E FS ++T +L S N CC+ Sbjct: 260 VIVLAYIVCWAPFFI-----VQMWSV--WDENFSWDDSENAAVTLSALLASLNSCCN 309
>P30560:V1AR_RAT Vasopressin V1a receptor - Rattus norvegicus (Rat)| Length = 424 Score = 31.2 bits (69), Expect = 3.8 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Frame = +1 Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEF------SLSLTHLIILDSRNICCH 648 FV++ Y +CW FI + +W V W E F + S+T +L S N CC+ Sbjct: 300 FVIVSAYILCWAPFFI-----VQMWSV--WDENFIWTDSENPSITITALLASLNSCCN 350
>Q9WTV9:V1AR_MICOH Vasopressin V1a receptor - Microtus ochrogaster (Prairie vole)| Length = 420 Score = 31.2 bits (69), Expect = 3.8 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = +1 Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCV----TAWGEEFSLSLTHLIILDSRNICCH 648 FV++ Y +CW FI + +W V W + + S+T +L S N CC+ Sbjct: 296 FVIVTAYILCWAPFFI-----VQMWSVWDDNFIWTDSENPSITITALLASLNSCCN 346
>Q9WTV8:V1AR_MICMA Vasopressin V1a receptor - Microtus montanus (Montane vole)| Length = 420 Score = 31.2 bits (69), Expect = 3.8 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Frame = +1 Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCV----TAWGEEFSLSLTHLIILDSRNICCH 648 FV++ Y +CW FI + +W V W + + S+T +L S N CC+ Sbjct: 296 FVIVTAYILCWAPFFI-----VQMWSVWDDNFIWTDSENPSITITALLASLNSCCN 346
>Q8N2Y8:RUSC2_HUMAN RUN and SH3 domain-containing protein 2 - Homo sapiens (Human)| Length = 1516 Score = 30.8 bits (68), Expect = 4.9 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%) Frame = +1 Query: 61 PSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASR-RREQ 237 PSP WS + P S PP A G P + L A+ S N+ R R + Sbjct: 613 PSPPWSTQVCQGPHSSEMPPAGLRATGQ---GPLAQLMDPGPALPGSPANSHTQRDARAR 669 Query: 238 AIAIGKERREALMRAK 285 A G E R L +K Sbjct: 670 ADGGGTESRPVLRYSK 685
>Q05404:MYCLA_XENLA L-myc A protein - Xenopus laevis (African clawed frog)| Length = 344 Score = 30.8 bits (68), Expect = 4.9 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Frame = +1 Query: 58 APSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQS-HRYAIKSSVHNTAASRRRE 234 +P P + PI EP +PP PGSP +S S +K HN +RR Sbjct: 216 SPQPNFHSPIKEEPGEVTSPPALQQCSSPMPGSPLASGSSDSEDIVKKKNHNYLERKRRN 275 Query: 235 QAIAIGKERREALMRAKRVCRAP 303 + RE + R + P Sbjct: 276 DLRSRFLALREEVPSLTRSTKTP 298
>P45385:IGA3_HAEIN Immunoglobulin A1 protease precursor - Haemophilus influenzae| Length = 1545 Score = 30.8 bits (68), Expect = 4.9 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%) Frame = +1 Query: 13 ELSRTRPTVRSCLVSAPSPVW----SVPIITEPRSR----RAPPP*TMADGNAPGSPASS 168 E+ + TV + ++ P+ + SVP E +R PPP AP +P+ + Sbjct: 988 EVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPP-------APATPSET 1040 Query: 169 LQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDEA-------- 324 ++ A S + + + A + RE AK +A N+ A Sbjct: 1041 TET--VAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKE 1098 Query: 325 -----TIEDGDMVIDEKADIETRTAQAVEELKSALS 417 T E + +EKA +ET Q V ++ S +S Sbjct: 1099 TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVS 1134
>P42782:IGA1_HAEIN Immunoglobulin A1 protease precursor - Haemophilus influenzae| Length = 1541 Score = 30.8 bits (68), Expect = 4.9 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%) Frame = +1 Query: 13 ELSRTRPTVRSCLVSAPSPVW----SVPIITEPRSR----RAPPP*TMADGNAPGSPASS 168 E+ + TV + ++ P+ + SVP E +R PPP AP +P+ + Sbjct: 984 EVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPP-------APATPSET 1036 Query: 169 LQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDEA-------- 324 ++ A S + + + A + RE AK +A N+ A Sbjct: 1037 TET--VAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKE 1094 Query: 325 -----TIEDGDMVIDEKADIETRTAQAVEELKSALS 417 T E + +EKA +ET Q V ++ S +S Sbjct: 1095 TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVS 1130
>P48211:CH60_CAUCR 60 kDa chaperonin - Caulobacter crescentus (Caulobacter vibrioides)| Length = 547 Score = 30.8 bits (68), Expect = 4.9 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = +1 Query: 265 EALMRAKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQAVEELKSALS 417 E L RAK+V D+ TI DG + EKADIE R AQ +++ S Sbjct: 315 EMLGRAKKVSIT----KDDTTIVDG---VGEKADIEARIAQIKRQIEDTTS 358
>Q62463:V1AR_MOUSE Vasopressin V1a receptor - Mus musculus (Mouse)| Length = 423 Score = 30.4 bits (67), Expect = 6.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFSLSLTHLIILDSRNICCH 648 FV++ Y +CW FI+ +W W + + S T +L S N CC+ Sbjct: 299 FVIVSAYILCWTPFFIVQMWSVW-DTNFVWTDSENPSTTITALLASLNSCCN 349 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 119,362,953 Number of extensions: 2613387 Number of successful extensions: 7232 Number of sequences better than 10.0: 16 Number of HSP's gapped: 7224 Number of HSP's successfully gapped: 16 Length of query: 226 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 117 Effective length of database: 70,788,284 Effective search space: 8282229228 Effective search space used: 8282229228 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)