ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9FYP9:IMA2_ORYSJ Importin subunit alpha-2 - Oryza sativa subsp.... 136 6e-32
2P37288:V1AR_HUMAN Vasopressin V1a receptor - Homo sapiens (Human) 35 0.26
3Q72LH0:KCY_THET2 Cytidylate kinase - Thermus thermophilus (strai... 35 0.26
4Q810W9:WHRN_RAT Whirlin - Rattus norvegicus (Rat) 33 0.99
5P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococc... 33 1.3
6Q5VQY3:PIN5_ORYSJ Probable auxin efflux carrier component 5 - Or... 32 1.7
7Q90352:AVT_CATCO [Arg8]-vasotocin receptor - Catostomus commerso... 32 2.9
8P30560:V1AR_RAT Vasopressin V1a receptor - Rattus norvegicus (Rat) 31 3.8
9Q9WTV9:V1AR_MICOH Vasopressin V1a receptor - Microtus ochrogaste... 31 3.8
10Q9WTV8:V1AR_MICMA Vasopressin V1a receptor - Microtus montanus (... 31 3.8
11Q8N2Y8:RUSC2_HUMAN RUN and SH3 domain-containing protein 2 - Hom... 31 4.9
12Q05404:MYCLA_XENLA L-myc A protein - Xenopus laevis (African cla... 31 4.9
13P45385:IGA3_HAEIN Immunoglobulin A1 protease precursor - Haemoph... 31 4.9
14P42782:IGA1_HAEIN Immunoglobulin A1 protease precursor - Haemoph... 31 4.9
15P48211:CH60_CAUCR 60 kDa chaperonin - Caulobacter crescentus (Ca... 31 4.9
16Q62463:V1AR_MOUSE Vasopressin V1a receptor - Mus musculus (Mouse) 30 6.4

>Q9FYP9:IMA2_ORYSJ Importin subunit alpha-2 - Oryza sativa subsp. japonica (Rice)|
          Length = 528
 Score =  136 bits (343), Expect = 6e-32
 Identities = 76/101 (75%), Positives = 86/101 (85%), Gaps = 3/101 (2%)
 Frame = +1

Query: 130 MADGNAPGSP--ASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAP 303
           MAD +A  SP  AS LQ HR A+KSSV NTAASRRREQAIAIGKERREAL+RAKRVCRAP
Sbjct: 1   MADDSASPSPSSASPLQHHREALKSSVRNTAASRRREQAIAIGKERREALIRAKRVCRAP 60

Query: 304 LSGNDEATIEDGDMVID-EKADIETRTAQAVEELKSALSSQ 423
           +SG+DEA +E+GDMV+D EKA +E +TA AVEELKSALS Q
Sbjct: 61  ISGSDEAEMEEGDMVVDEEKACLEAKTAHAVEELKSALSIQ 101



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>P37288:V1AR_HUMAN Vasopressin V1a receptor - Homo sapiens (Human)|
          Length = 418

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +1

Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFSLSLTHLIILDSRNICCH 648
           FV++  Y +CW   FI+    +W   ++ W E  + ++T   +L S N CC+
Sbjct: 294 FVIVTAYIVCWAPFFIIQMWSVW-DPMSVWTESENPTITITALLGSLNSCCN 344



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>Q72LH0:KCY_THET2 Cytidylate kinase - Thermus thermophilus (strain HB27 / ATCC|
           BAA-163 / DSM 7039)
          Length = 208

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 27/103 (26%), Positives = 46/103 (44%)
 Frame = +1

Query: 49  LVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRR 228
           +VSA + +  V      R +  PPP  +A+G   G+      +H++ + +S    A  R 
Sbjct: 96  VVSAVARLPGVRAWVNRRLKEVPPP-FVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRA 154

Query: 229 REQAIAIGKERREALMRAKRVCRAPLSGNDEATIEDGDMVIDE 357
           RE+  A  +  R+ L R +R         D   ++ G M +DE
Sbjct: 155 RERPQAYEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDE 197



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>Q810W9:WHRN_RAT Whirlin - Rattus norvegicus (Rat)|
          Length = 920

 Score = 33.1 bits (74), Expect = 0.99
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +1

Query: 16  LSRTRPTVRSCLVSAPSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIK 195
           L +TR  VR       S   S  + + PR+R  PPP  +A    PG P+S+  S    I 
Sbjct: 606 LGQTRKPVREDSAPLSSAAHSGIVFSAPRNRSPPPPPGIAPTPTPG-PSSARDSPSSPIY 664

Query: 196 SSVHNTAASRRR 231
           +S+ +   S R+
Sbjct: 665 ASISHANPSSRK 676



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>P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococcus xanthus|
          Length = 777

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
 Frame = +1

Query: 61  PSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQA 240
           P+PV + P++T P +  APP    A    P + A   +   +A  ++ H  AA  R E+A
Sbjct: 147 PAPV-AAPVVT-PAAVAAPPAPVQAPVAPPPTQAPVAEPGAHAAAAAPHPAAAHGRDEEA 204

Query: 241 IAIGKERREALMRAKRVCRAPLSGNDEATIEDGDMVIDE-KADIETRTAQAVEELKSALS 417
            +  K        A R  R  +   D   +  GD++++  +  + +   +A+ E  S L 
Sbjct: 205 PSAAKS-----AVADRSIRVNVEVLDALGLLAGDLLVESARGRLRSSETEALFERFSRLG 259

Query: 418 SQYVR 432
            +++R
Sbjct: 260 DRFLR 264



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>Q5VQY3:PIN5_ORYSJ Probable auxin efflux carrier component 5 - Oryza sativa subsp.|
           japonica (Rice)
          Length = 426

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 30/97 (30%), Positives = 46/97 (47%)
 Frame = +1

Query: 100 RSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMR 279
           RS  APPP   ++G+A  SP+S +++   A  ++ +  AA R +E A+ I     E    
Sbjct: 173 RSASAPPP-ASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVAVNI-----EITEM 226

Query: 280 AKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQA 390
           A    R  +SG  E T    ++   E A +E   A A
Sbjct: 227 AASTARDGVSG--ETTAAAKEVSSGEVAPVEEEEASA 261



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>Q90352:AVT_CATCO [Arg8]-vasotocin receptor - Catostomus commersoni (White sucker)|
          Length = 434

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 496 VVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFS------LSLTHLIILDSRNICCH 648
           V++L Y +CW   FI     + +W V  W E FS       ++T   +L S N CC+
Sbjct: 260 VIVLAYIVCWAPFFI-----VQMWSV--WDENFSWDDSENAAVTLSALLASLNSCCN 309



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>P30560:V1AR_RAT Vasopressin V1a receptor - Rattus norvegicus (Rat)|
          Length = 424

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +1

Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEF------SLSLTHLIILDSRNICCH 648
           FV++  Y +CW   FI     + +W V  W E F      + S+T   +L S N CC+
Sbjct: 300 FVIVSAYILCWAPFFI-----VQMWSV--WDENFIWTDSENPSITITALLASLNSCCN 350



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>Q9WTV9:V1AR_MICOH Vasopressin V1a receptor - Microtus ochrogaster (Prairie vole)|
          Length = 420

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCV----TAWGEEFSLSLTHLIILDSRNICCH 648
           FV++  Y +CW   FI     + +W V      W +  + S+T   +L S N CC+
Sbjct: 296 FVIVTAYILCWAPFFI-----VQMWSVWDDNFIWTDSENPSITITALLASLNSCCN 346



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>Q9WTV8:V1AR_MICMA Vasopressin V1a receptor - Microtus montanus (Montane vole)|
          Length = 420

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +1

Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCV----TAWGEEFSLSLTHLIILDSRNICCH 648
           FV++  Y +CW   FI     + +W V      W +  + S+T   +L S N CC+
Sbjct: 296 FVIVTAYILCWAPFFI-----VQMWSVWDDNFIWTDSENPSITITALLASLNSCCN 346



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>Q8N2Y8:RUSC2_HUMAN RUN and SH3 domain-containing protein 2 - Homo sapiens (Human)|
          Length = 1516

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = +1

Query: 61  PSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQSHRYAIKSSVHNTAASR-RREQ 237
           PSP WS  +   P S   PP    A G     P + L     A+  S  N+   R  R +
Sbjct: 613 PSPPWSTQVCQGPHSSEMPPAGLRATGQ---GPLAQLMDPGPALPGSPANSHTQRDARAR 669

Query: 238 AIAIGKERREALMRAK 285
           A   G E R  L  +K
Sbjct: 670 ADGGGTESRPVLRYSK 685



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>Q05404:MYCLA_XENLA L-myc A protein - Xenopus laevis (African clawed frog)|
          Length = 344

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
 Frame = +1

Query: 58  APSPVWSVPIITEPRSRRAPPP*TMADGNAPGSPASSLQS-HRYAIKSSVHNTAASRRRE 234
           +P P +  PI  EP    +PP         PGSP +S  S     +K   HN    +RR 
Sbjct: 216 SPQPNFHSPIKEEPGEVTSPPALQQCSSPMPGSPLASGSSDSEDIVKKKNHNYLERKRRN 275

Query: 235 QAIAIGKERREALMRAKRVCRAP 303
              +     RE +    R  + P
Sbjct: 276 DLRSRFLALREEVPSLTRSTKTP 298



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>P45385:IGA3_HAEIN Immunoglobulin A1 protease precursor - Haemophilus influenzae|
          Length = 1545

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
 Frame = +1

Query: 13   ELSRTRPTVRSCLVSAPSPVW----SVPIITEPRSR----RAPPP*TMADGNAPGSPASS 168
            E+ +   TV +  ++ P+ +     SVP   E  +R      PPP       AP +P+ +
Sbjct: 988  EVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPP-------APATPSET 1040

Query: 169  LQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDEA-------- 324
             ++   A  S   +    +  + A     + RE    AK   +A    N+ A        
Sbjct: 1041 TET--VAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKE 1098

Query: 325  -----TIEDGDMVIDEKADIETRTAQAVEELKSALS 417
                 T E   +  +EKA +ET   Q V ++ S +S
Sbjct: 1099 TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVS 1134



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>P42782:IGA1_HAEIN Immunoglobulin A1 protease precursor - Haemophilus influenzae|
          Length = 1541

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
 Frame = +1

Query: 13   ELSRTRPTVRSCLVSAPSPVW----SVPIITEPRSR----RAPPP*TMADGNAPGSPASS 168
            E+ +   TV +  ++ P+ +     SVP   E  +R      PPP       AP +P+ +
Sbjct: 984  EVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPP-------APATPSET 1036

Query: 169  LQSHRYAIKSSVHNTAASRRREQAIAIGKERREALMRAKRVCRAPLSGNDEA-------- 324
             ++   A  S   +    +  + A     + RE    AK   +A    N+ A        
Sbjct: 1037 TET--VAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKE 1094

Query: 325  -----TIEDGDMVIDEKADIETRTAQAVEELKSALS 417
                 T E   +  +EKA +ET   Q V ++ S +S
Sbjct: 1095 TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVS 1130



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>P48211:CH60_CAUCR 60 kDa chaperonin - Caulobacter crescentus (Caulobacter vibrioides)|
          Length = 547

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 21/51 (41%), Positives = 27/51 (52%)
 Frame = +1

Query: 265 EALMRAKRVCRAPLSGNDEATIEDGDMVIDEKADIETRTAQAVEELKSALS 417
           E L RAK+V        D+ TI DG   + EKADIE R AQ   +++   S
Sbjct: 315 EMLGRAKKVSIT----KDDTTIVDG---VGEKADIEARIAQIKRQIEDTTS 358



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>Q62463:V1AR_MOUSE Vasopressin V1a receptor - Mus musculus (Mouse)|
          Length = 423

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 493 FVVLLGYSICWRSQFIL*YLPIWLWCVTAWGEEFSLSLTHLIILDSRNICCH 648
           FV++  Y +CW   FI+    +W      W +  + S T   +L S N CC+
Sbjct: 299 FVIVSAYILCWTPFFIVQMWSVW-DTNFVWTDSENPSTTITALLASLNSCCN 349


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 119,362,953
Number of extensions: 2613387
Number of successful extensions: 7232
Number of sequences better than 10.0: 16
Number of HSP's gapped: 7224
Number of HSP's successfully gapped: 16
Length of query: 226
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 117
Effective length of database: 70,788,284
Effective search space: 8282229228
Effective search space used: 8282229228
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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