| Clone Name | FLbaf38l02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121439:Os04g0530200 | 39 | 0.003 | 2 | AK105586:Os04g0530200 | 39 | 0.003 | 3 | Os03g0145000:Os03g0145000 | 28 | 3.5 | 4 | AK108405: | 28 | 4.6 | 5 | Os12g0127900:Os12g0127900 | 27 | 6.0 | 6 | AK109279:Os09g0376300 | 27 | 6.0 |
|---|
>AK121439:Os04g0530200 | Length = 72 Score = 38.5 bits (88), Expect = 0.003 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +2 Query: 92 KDPLSLSP-SPTKKGREGMGGFQRQVKERTMEXXXXXXXXXXXXXDFG---KKTWNKVKA 259 +D +S SP SP +K MGGF QVKER E G KK WNKVK+ Sbjct: 13 RDQISFSPPSPIRKR---MGGFDLQVKERAKELKHLKGAVMKGVKVVGDSCKKAWNKVKS 69 Query: 260 IK 265 IK Sbjct: 70 IK 71
>AK105586:Os04g0530200 | Length = 73 Score = 38.5 bits (88), Expect = 0.003 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +2 Query: 92 KDPLSLSP-SPTKKGREGMGGFQRQVKERTMEXXXXXXXXXXXXXDFG---KKTWNKVKA 259 +D +S SP SP +K MGGF QVKER E G KK WNKVK+ Sbjct: 14 RDQISFSPPSPIRKR---MGGFDLQVKERAKELKHLKGAVMKGVKVVGDSCKKAWNKVKS 70 Query: 260 IK 265 IK Sbjct: 71 IK 72
>Os03g0145000:Os03g0145000 | Length = 1324 Score = 28.1 bits (61), Expect = 3.5 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 Query: 9 RRFRHATRQSASPFLVPSLPPP 74 RR HA R +ASP PS PPP Sbjct: 1032 RRRPHAVRAAASPASAPSGPPP 1053
>AK108405: | Length = 287 Score = 27.7 bits (60), Expect = 4.6 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = -2 Query: 432 SKTDPTNQITTTTGGKKNRSYQAVHEHRSYQAVHEPAMGLER------RKEADGRGDLTD 271 S TD + T T GK + H+++ +H+P+ GLE + G+ +LT Sbjct: 60 SATDTLKIVLTATEGKTGKK-----PHQAFLTLHDPSTGLEESFPFSLKDNGKGKVELTQ 114 Query: 270 QRL 262 + L Sbjct: 115 KDL 117
>Os12g0127900:Os12g0127900 | Length = 239 Score = 27.3 bits (59), Expect = 6.0 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%) Frame = -1 Query: 82 SAAGGGKEGTRKGDADWR--VAW 20 +A GGG G KG+ DWR +AW Sbjct: 75 AAGGGGGGGGAKGEMDWRLLLAW 97
>AK109279:Os09g0376300 | Length = 168 Score = 27.3 bits (59), Expect = 6.0 Identities = 8/29 (27%), Positives = 14/29 (48%) Frame = -1 Query: 97 ILPDRSAAGGGKEGTRKGDADWRVAWRNR 11 + D GG G+ D+DW + W+ + Sbjct: 85 VASDDGGGGGWLSGSESDDSDWAIGWQEK 113 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,353,907 Number of extensions: 228439 Number of successful extensions: 913 Number of sequences better than 10.0: 6 Number of HSP's gapped: 911 Number of HSP's successfully gapped: 6 Length of query: 173 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 79 Effective length of database: 11,636,001 Effective search space: 919244079 Effective search space used: 919244079 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)