ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9CMI7:HIS82_PASMU Histidinol-phosphate aminotransferase 2 - Pas... 29 8.4

>Q9CMI7:HIS82_PASMU Histidinol-phosphate aminotransferase 2 - Pasteurella multocida|
          Length = 365
 Score = 29.3 bits (64), Expect = 8.4
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 126 LVGEGERERGSFRIGRPLEEAKKELGKATLI 34
           +V EG ++   ++ G+P+EE ++ELG   +I
Sbjct: 6   IVNEGVKQLHPYQAGKPIEELERELGITNII 36


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 73,808,967
Number of extensions: 1298315
Number of successful extensions: 4162
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4158
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 68
Effective length of database: 71,885,464
Effective search space: 4888211552
Effective search space used: 4888211552
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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