ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38k07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102096:Os06g0683900 | 45 | 1e-04 | 2 | AK063941:Os06g0683900 | 45 | 1e-04 | 3 | AK102859:Os08g0528700 | 36 | 0.061 | 4 | Os04g0489200:Os04g0489200 | 34 | 0.18 | 5 | AK111122:Os06g0261300 | 30 | 0.44 | 6 | AK073534:Os06g0261300 | 30 | 0.44 | 7 | AK120631:Os03g0364700 | 33 | 0.51 | 8 | Os02g0119000:Os02g0119000 | 32 | 0.87 | 9 | Os02g0638200:Os02g0638200 | 30 | 3.3 | 10 | AK101708:Os10g0124500 | 30 | 3.3 | 11 | AK119671:Os04g0674000 | 29 | 5.7 | 12 | AK071276:Os04g0674000 | 29 | 5.7 | 13 | X56063:Os06g0726200 | 29 | 7.4 | 14 | AY378172:Os06g0726200 | 29 | 7.4 | 15 | Z29961:Os06g0726200 | 29 | 7.4 | 16 | AK105798:Os06g0726200 | 29 | 7.4 | 17 | AK104020:Os06g0726200 | 29 | 7.4 | 18 | AK099339:Os06g0726200 | 29 | 7.4 | 19 | AK061042:Os06g0726200 | 29 | 7.4 | 20 | Os02g0547300:Os02g0547300 | 28 | 9.7 | 21 | AK111477: | 28 | 9.7 | 22 | AY429017:Os06g0181300 | 28 | 9.7 | 23 | AK120846:Os10g0554900 | 28 | 9.7 | 24 | AK073508:Os02g0114200 | 28 | 9.7 | 25 | AK061078:Os02g0114200 | 28 | 9.7 |
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>AK102096:Os06g0683900 | Length = 431 Score = 45.1 bits (105), Expect = 1e-04 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Frame = -2 Query: 520 LRPEKE---QHRSGVAAYPASMKMAIGRK*EAFLPAGIRKKPRRLALHA-RRQCLSAHQT 353 L+P KE Q R GV+ P + +G K PA R KP L+A R + + Q Sbjct: 172 LKPIKEPPVQRRRGVSLGPLEIHHGVGSK----APAAARAKPFTTKLNAIREETRPSKQF 227 Query: 352 TLTV*PWPSASTRRRIRPDPGLAASIFKAR 263 + PWPS++TR+ + G AAS KAR Sbjct: 228 AVPAKPWPSSNTRQTLDSRQGTAASRAKAR 257
>AK063941:Os06g0683900 | Length = 431 Score = 45.1 bits (105), Expect = 1e-04 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Frame = -2 Query: 520 LRPEKE---QHRSGVAAYPASMKMAIGRK*EAFLPAGIRKKPRRLALHA-RRQCLSAHQT 353 L+P KE Q R GV+ P + +G K PA R KP L+A R + + Q Sbjct: 172 LKPIKEPPVQRRRGVSLGPLEIHHGVGSK----APAAARAKPFTTKLNAIREETRPSKQF 227 Query: 352 TLTV*PWPSASTRRRIRPDPGLAASIFKAR 263 + PWPS++TR+ + G AAS KAR Sbjct: 228 AVPAKPWPSSNTRQTLDSRQGTAASRAKAR 257
>AK102859:Os08g0528700 | Length = 187 Score = 35.8 bits (81), Expect = 0.061 Identities = 24/70 (34%), Positives = 33/70 (47%) Frame = +1 Query: 274 RLTPPALGRVGYASASRPKAMATP*ASSDAPTGTAVGREGRGAEASSGCLQARRPLTSGQ 453 R +PP+ G +S P+ A+P S+ P+ TA + ASS C A R T Sbjct: 86 RSSPPSHG------SSAPRRPASP--SASPPSATASACPTPRSPASSSCPAAPRASTHAT 137 Query: 454 WPSSSTQGMP 483 WP S+ G P Sbjct: 138 WPRGSSSGSP 147
>Os04g0489200:Os04g0489200 | Length = 307 Score = 34.3 bits (77), Expect = 0.18 Identities = 30/87 (34%), Positives = 36/87 (41%) Frame = -2 Query: 328 SASTRRRIRPDPGLAASIFKARCGPLASCFFSGCEVRRRGTAWSGDGRPPAPARSGHDQA 149 +A+ R RP P LAA+ PLA RRR RPPA AR GH + Sbjct: 169 AAAGPRAARPPPPLAAAAVPRSARPLAPT-----RHRRRSPPTV---RPPASARCGHPPS 220 Query: 148 SIRPTIAPSGT*REAHNPSYPSAAANR 68 + R P G AH P +A R Sbjct: 221 ARRGRRPPRGV---AHRPPLAAAVGPR 244
>AK111122:Os06g0261300 | Length = 110 Score = 29.6 bits (65), Expect(2) = 0.44 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 Query: 153 WSWPLRAGAGGRPSPDHAVPRR 218 WSW AG G+P H +PRR Sbjct: 9 WSWAAAAGGRGQPPIRHGLPRR 30 Score = 22.3 bits (46), Expect(2) = 0.44 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +2 Query: 311 PPRRGRRPWLHRERRLMRRQALPSGV 388 P RGRR WL R R + P V Sbjct: 32 PATRGRRWWLGRRSLAQSRGSAPIDV 57
>AK073534:Os06g0261300 | Length = 110 Score = 29.6 bits (65), Expect(2) = 0.44 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 Query: 153 WSWPLRAGAGGRPSPDHAVPRR 218 WSW AG G+P H +PRR Sbjct: 9 WSWAAAAGGRGQPPIRHGLPRR 30 Score = 22.3 bits (46), Expect(2) = 0.44 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +2 Query: 311 PPRRGRRPWLHRERRLMRRQALPSGV 388 P RGRR WL R R + P V Sbjct: 32 PATRGRRWWLGRRSLAQSRGSAPIDV 57
>AK120631:Os03g0364700 | Length = 274 Score = 32.7 bits (73), Expect = 0.51 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +2 Query: 281 RRQPWVGSDTPPRRGRRPWLHRERRLMRRQALPSGVKGEAPRLLPDACR 427 RR+P PRR RR LHR RR A + + + LLPDA R Sbjct: 122 RRRPPGRPPRAPRRHRRAPLHRARRPPAVAAAEAATRADRRLLLPDAAR 170
>Os02g0119000:Os02g0119000 | Length = 1058 Score = 32.0 bits (71), Expect = 0.87 Identities = 18/61 (29%), Positives = 33/61 (54%) Frame = -3 Query: 660 RAIAFLSARPEIFSARSVLQLLLEQPGAQKTNILTRGAVFRRLLKMLLGQRKNNIEAALR 481 R + +L + I +AR+ + LL++PGA L+ + ++L K+ +R +AAL Sbjct: 971 RVVKWLPTKDTIEAARAASEKLLKRPGAGSEGPLSSCTMIKKLEKVKTAKRSVVHDAALN 1030 Query: 480 H 478 H Sbjct: 1031 H 1031
>Os02g0638200:Os02g0638200 | Length = 610 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +3 Query: 159 WPLRAGAGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPG 296 W GA RPSP P+R+ S ++ G +RA + SPG Sbjct: 148 WERHGGAVSRPSPHRGSPQRKRSGSRERSSGGGSRRA----SRSPG 189
>AK101708:Os10g0124500 | Length = 457 Score = 30.0 bits (66), Expect = 3.3 Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Frame = +2 Query: 299 GSDTPPRRGRRPWLHRERRLMRRQALPSGVKGEAPRL-------LPDACRQEGL-SLPAN 454 G PPRR RR PS V G A +P+ ++E L LPAN Sbjct: 65 GQPPPPRRRRRG----------EPPSPSPVPGTATSEAAVAGLPIPEEIQEEILLRLPAN 114 Query: 455 GHLHRRRVCRN----AASMLFFLWPKSIFNRRLKTAPRVKIF------VFWAPGCSSRSC 604 LH R VCR+ A++ F L +RR P V F W P C Sbjct: 115 SVLHCRAVCRSWRHIASTHAFLL----RHHRRQPEFPLVTSFRNPAPADQWMPNC----- 165 Query: 605 KTLRALKISGRALKNAIARSIFG--APACARTKL*AAADG 718 + L++A R IF P C + A+ DG Sbjct: 166 -------LDAILLRSAERRPIFSFPRPFCGGFPITASCDG 198
>AK119671:Os04g0674000 | Length = 321 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = +2 Query: 707 AADGTAGSARIGRRTSARLLEMLRSPRCKTATVAR 811 AA G GSAR G SARL +L P A +AR Sbjct: 34 AAGGGPGSARFGAALSARLGSLLPLPASPLAALAR 68
>AK071276:Os04g0674000 | Length = 321 Score = 29.3 bits (64), Expect = 5.7 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = +2 Query: 707 AADGTAGSARIGRRTSARLLEMLRSPRCKTATVAR 811 AA G GSAR G SARL +L P A +AR Sbjct: 34 AAGGGPGSARFGAALSARLGSLLPLPASPLAALAR 68
>X56063:Os06g0726200 | Length = 199 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 26 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 70
>AY378172:Os06g0726200 | Length = 195 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 22 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 66
>Z29961:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 41 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 85
>AK105798:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 41 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 85
>AK104020:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 41 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 85
>AK099339:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 41 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 85
>AK061042:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +3 Query: 177 AGGRPSPDHAVPRRRTSHPEKKQLARGPQRALKIDAASPGSGRIR 311 AG P P A P R S P A P+ AASP S R R Sbjct: 41 AGADPPPPTAAPAARASAPAAAAAAARPRPPAVAAAASPPSCRAR 85
>Os02g0547300:Os02g0547300 | Length = 145 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Frame = -3 Query: 219 GGGAQHGLEMG----GLPHQPEAAMTRRRSGQR*RPP--AHNARHTIPRIH 85 GGG Q G G H A + R R G PP AH R +PR+H Sbjct: 62 GGGRQRLRRRGPGVVGRAHGRRARLLRARRGAAVSPPPHAHRRRLALPRLH 112
>AK111477: | Length = 208 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 Query: 213 RRRTSHPEKKQLARGPQRALKIDAASPGSGRIRLRVEAEGHG 338 R R PE++ + GP+R ++ D A + R VE E G Sbjct: 123 RGRVERPEQRAVDVGPERGVRRDGAQRDAARATADVEVERAG 164
>AY429017:Os06g0181300 | Length = 426 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Frame = -3 Query: 729 DPAVPSAAAQSLVRA----QAGAPNMLRA--IAFLSARPEIFSARSVLQLLLEQPGA 577 DP+VP+AAA + + A P +LRA + L+A P +A LQLL P + Sbjct: 19 DPSVPAAAANAALAALPFPSRPTPRLLRASLLRRLAADPVSAAALDSLQLLASLPSS 75
>AK120846:Os10g0554900 | Length = 369 Score = 28.5 bits (62), Expect = 9.7 Identities = 25/72 (34%), Positives = 31/72 (43%) Frame = +1 Query: 427 ARRPLTSGQWPSSSTQGMPQRRFYVVLSLA*EHLQQAPKNCSAR*NIRFLGAGLLQQKLQ 606 ARRP S SSS + R VL ++ P+ A R L A LLQ + Sbjct: 114 ARRPRRSSSGGSSSPENAGSTRGSAVLRDMMTRRKEEPEKEEAAHRARMLAARLLQWRFA 173 Query: 607 NAARTKNFWARA 642 N AR + ARA Sbjct: 174 N-ARMEKAMARA 184
>AK073508:Os02g0114200 | Length = 500 Score = 28.5 bits (62), Expect = 9.7 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%) Frame = +2 Query: 314 PRRGRRPWLHRER-----RLMRRQALPSGVKGEAPRLLPDACRQEGLSLPAN-------G 457 PR + P ER L+ ++A P+G G+ P + P + ++LP G Sbjct: 27 PRDAKFPAAQAERLIRSLNLLPKEAGPTGA-GDVPSVAPGELLERRVTLPGLPQGVGDLG 85 Query: 458 HL--HRRRVCRNAASMLFFLWPKSIFNRRLKTAPRVKIFVFWAPGCSS 595 H + R + A M +FL F R K V I++ PGCSS Sbjct: 86 HHAGYYRLPNTHDARMFYFL-----FESRGKKEDPVVIWLTGGPGCSS 128
>AK061078:Os02g0114200 | Length = 500 Score = 28.5 bits (62), Expect = 9.7 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 14/108 (12%) Frame = +2 Query: 314 PRRGRRPWLHRER-----RLMRRQALPSGVKGEAPRLLPDACRQEGLSLPAN-------G 457 PR + P ER L+ ++A P+G G+ P + P + ++LP G Sbjct: 27 PRDAKFPAAQAERLIRSLNLLPKEAGPTGA-GDVPSVAPGELLERRVTLPGLPQGVGDLG 85 Query: 458 HL--HRRRVCRNAASMLFFLWPKSIFNRRLKTAPRVKIFVFWAPGCSS 595 H + R + A M +FL F R K V I++ PGCSS Sbjct: 86 HHAGYYRLPNTHDARMFYFL-----FESRGKKEDPVVIWLTGGPGCSS 128 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 35,155,819 Number of extensions: 879090 Number of successful extensions: 3577 Number of sequences better than 10.0: 25 Number of HSP's gapped: 3573 Number of HSP's successfully gapped: 27 Length of query: 394 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 291 Effective length of database: 11,275,632 Effective search space: 3281208912 Effective search space used: 3281208912 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
