| Clone Name | FLbaf38k07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L19119.1|BLYA22S Hordeum vulgare abscisic acid and stress inducible (A22) gene Length = 3531 Score = 359 bits (181), Expect = 1e-95 Identities = 266/293 (90%), Gaps = 1/293 (0%) Strand = Plus / Minus Query: 521 agcatcttcaacaggcgcctaaaaactgctccgcgcgttaaaatattcgttttttgggcg 580 ||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||| |||| Sbjct: 1103 agcatctccaacaggcgcccaaaaactgttccgcgcgttaaaagattcgttttttaggcg 1044 Query: 581 ccgggctgctccagcagaagctgcaaaacgctgcgcgcactaaaaatttctgggcgcgcg 640 | | |||||||||||||||||||||||| |||||||| ||||||| || |||||||||| Sbjct: 1043 tcagactgctccagcagaagctgcaaaacactgcgcgcgctaaaaacttttgggcgcgcg 984 Query: 641 cttaaaaa-cgctatcgcgcgcagcatatttggtgcgccggcttgcgcgcgcaccaaact 699 || ||||| |||||||||||||| ||||||||||||| ||||||||||||||| |||||| Sbjct: 983 ctcaaaaaacgctatcgcgcgcaacatatttggtgcgtcggcttgcgcgcgcagcaaact 924 Query: 700 ctgagcggctgcagatgggaccgctggatcagcgcggattgggcgccgcactagcgcgcg 759 |||||||||||||||||||||||||||||| | |||||| |||||||| ||||||||| Sbjct: 923 ctgagcggctgcagatgggaccgctggatcggactggattgagcgccgcagtagcgcgcg 864 Query: 760 tctgttggagatgcttcggtccccgcgctgtaaaactgctacagtggcgcgct 812 ||||||||||||||| ||||||||||||| ||||||||||||||||| |||| Sbjct: 863 tctgttggagatgctccggtccccgcgcttcaaaactgctacagtggcacgct 811
>emb|AJ717740.1| Hordeum vulgare betaGAL1 gene, tRNA-Pro pseudogene, ORF_1 pseudogene and tnp2-like1 gene (partial) Length = 10640 Score = 85.7 bits (43), Expect = 3e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 736 gattgggcgccgcactagcgcgcgtctgttggagatgcttcggtccccgcgctgtaaaac 795 ||||||||| |||||||||||| |||||||| ||||| | ||||||||||||| ||||| Sbjct: 8404 gattgggcgtcgcactagcgcgtgtctgttgaagatgttccggtccccgcgctttaaaaa 8463 Query: 796 tgctacagtggcgcg 810 |||||||||| |||| Sbjct: 8464 tgctacagtgacgcg 8478 Score = 44.1 bits (22), Expect = 1.1 Identities = 46/54 (85%) Strand = Plus / Plus Query: 665 atatttggtgcgccggcttgcgcgcgcaccaaactctgagcggctgcagatggg 718 |||||||||||| | ||||||| || || ||||||||| || ||||||| |||| Sbjct: 8343 atatttggtgcgtcagcttgcgggcacagcaaactctgggctgctgcaggtggg 8396
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 48.1 bits (24), Expect = 0.073 Identities = 54/64 (84%) Strand = Plus / Plus Query: 661 cagcatatttggtgcgccggcttgcgcgcgcaccaaactctgagcggctgcagatgggac 720 |||||||||| ||| ||| | | | |||||| ||||||||| || |||||||||||||| Sbjct: 74646 cagcatatttagtgggcccggtcgtgcgcgctgcaaactctgggctgctgcagatgggac 74705 Query: 721 cgct 724 |||| Sbjct: 74706 cgct 74709
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 725 ggatcagcgcggattgggcgcc 746 |||||||||||||||||||||| Sbjct: 5505061 ggatcagcgcggattgggcgcc 5505082
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 742 gcgccgcactagcgcgcgtctgttggagat 771 ||||||| ||||||||||||||||| |||| Sbjct: 113361 gcgccgcgctagcgcgcgtctgttgaagat 113332
>gb|AC120400.11| Mus musculus chromosome 1, clone RP24-351P4, complete sequence Length = 144055 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1036 ctagaattaaattaatttttaa 1057 |||||||||||||||||||||| Sbjct: 33044 ctagaattaaattaatttttaa 33023
>gb|AC123695.10| Mus musculus chromosome 15, clone RP23-328C23, complete sequence Length = 217334 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 991 taagtgacggttgctaaactccacaa 1016 ||||||| |||||||||||||||||| Sbjct: 92262 taagtgatggttgctaaactccacaa 92287
>gb|AC156607.5| Mus musculus chromosome 1, clone RP23-230A23, complete sequence Length = 182640 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1036 ctagaattaaattaatttttaa 1057 |||||||||||||||||||||| Sbjct: 179845 ctagaattaaattaatttttaa 179824
>gb|AC162365.5| Mus musculus chromosome 19, clone RP23-75P11, complete sequence Length = 157286 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1036 ctagaattaaattaatttttaa 1057 |||||||||||||||||||||| Sbjct: 41288 ctagaattaaattaatttttaa 41267
>gb|AC118005.9| Mus musculus chromosome 19, clone RP23-318J14, complete sequence Length = 195212 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1036 ctagaattaaattaatttttaa 1057 |||||||||||||||||||||| Sbjct: 5079 ctagaattaaattaatttttaa 5100
>ref|XM_001211532.1| Aspergillus terreus NIH2624 predicted protein (ATEG_02354) mRNA, complete cds Length = 1758 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ccgcaacgccgcttctatgtt 501 ||||||||||||||||||||| Sbjct: 513 ccgcaacgccgcttctatgtt 533
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 gcctaagagcatcttcaacag 534 ||||||||||||||||||||| Sbjct: 29370546 gcctaagagcatcttcaacag 29370526
>gb|AC113295.5| Mus musculus chromosome 5, clone RP23-424M12, complete sequence Length = 239105 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 691 caccaaactctgagcggctgcagat 715 ||||||||||||| ||||||||||| Sbjct: 128869 caccaaactctgaccggctgcagat 128845
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 gcctaagagcatcttcaacag 534 ||||||||||||||||||||| Sbjct: 149409 gcctaagagcatcttcaacag 149389
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 514 gcctaagagcatcttcaacag 534 ||||||||||||||||||||| Sbjct: 65608 gcctaagagcatcttcaacag 65588
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gaggccgcccatctccagacc 201 ||||||||||||||||||||| Sbjct: 620463 gaggccgcccatctccagacc 620483
>emb|AJ289080.1|CAL289080 Candida albicans vps18 gene Length = 4962 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 946 gagggtatttataccctagta 966 ||||||||||||||||||||| Sbjct: 4862 gagggtatttataccctagta 4842
>emb|AJ222584.1|CPEVPSBC Euglena viridis chloroplast partial psbC gene & internal mat2 gene containing complete internal group II introns 2d & 2e Length = 3411 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1039 gaattaaattaatttttaaca 1059 ||||||||||||||||||||| Sbjct: 192 gaattaaattaatttttaaca 172
>ref|XM_722944.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07220) partial mRNA Length = 484 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1037 tagaattaaattaatttttaa 1057 ||||||||||||||||||||| Sbjct: 105 tagaattaaattaatttttaa 125 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 170,226,236 Number of extensions: 8758908 Number of successful extensions: 161235 Number of sequences better than 10.0: 19 Number of HSP's gapped: 161234 Number of HSP's successfully gapped: 20 Length of query: 1184 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1161 Effective length of database: 18,503,978,556 Effective search space: 21483119103516 Effective search space used: 21483119103516 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)