ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42g02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK110977:Os06g0681300 | 77 | 9e-15 | 2 | AK067855:Os04g0627400 | 58 | 7e-09 | 3 | Os01g0917700:Os01g0917700 | 49 | 4e-06 | 4 | AK099317:Os07g0446000 | 47 | 1e-05 | 5 | AK072251:Os07g0446000 | 47 | 1e-05 | 6 | AK119609:Os03g0847900 | 40 | 0.001 | 7 | AK061411:Os03g0847900 | 40 | 0.001 | 8 | AK101984:Os04g0577200 | 32 | 0.32 | 9 | AY364311:Os02g0679500 | 30 | 1.6 | 10 | AK110069: | 30 | 2.1 | 11 | AK120397:Os03g0775200 | 28 | 4.6 | 12 | AK108137:Os01g0967200 | 28 | 4.6 | 13 | Os12g0485900:Os12g0485900 | 28 | 6.0 | 14 | Os06g0291100:Os06g0291100 | 28 | 6.0 | 15 | AY364310:Os12g0533400 | 28 | 6.0 | 16 | AK103596:Os07g0408500 | 28 | 6.0 | 17 | AK065886:Os02g0108000 | 28 | 6.0 | 18 | AK110199: | 28 | 7.8 | 19 | AK071807:Os11g0153400 | 28 | 7.8 | 20 | AK067300:Os12g0155200 | 28 | 7.8 | 21 | AK062283:Os01g0686200 | 28 | 7.8 |
|---|
>AK110977:Os06g0681300 | Length = 158 Score = 77.4 bits (189), Expect = 9e-15 Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 3/104 (2%) Frame = +2 Query: 110 SQIF-VAKEQEMVIGRPTDVKHVAHIGWSSSTPGTLTGNASPSWMNVIEGSSDFS--SMG 280 SQIF + K+QEM IG PTDV+HV+HIG T ++ PSWM+ G + S SMG Sbjct: 16 SQIFALQKQQEMEIGCPTDVRHVSHIGVG-------TSDSCPSWMSEFRGLEELSAGSMG 68 Query: 281 YFAPSAGTSWTSQDFEQHHQPPRDMLPLGMASEITGEDVSAALY 412 FA S TSW SQDF+ +PPR LP + ++ +G++ ++ + Sbjct: 69 SFAQSRKTSWASQDFD---KPPRATLPTEVCTDKSGQEAASCCH 109
>AK067855:Os04g0627400 | Length = 85 Score = 57.8 bits (138), Expect = 7e-09 Identities = 28/39 (71%), Positives = 28/39 (71%) Frame = +2 Query: 122 VAKEQEMVIGRPTDVKHVAHIGWSSSTPGTLTGNASPSW 238 V KE EM IG PTDVKHVAHIGW LTGNASPSW Sbjct: 5 VVKEHEMQIGSPTDVKHVAHIGWDG-----LTGNASPSW 38
>Os01g0917700:Os01g0917700 | Length = 186 Score = 48.5 bits (114), Expect = 4e-06 Identities = 26/49 (53%), Positives = 30/49 (61%) Frame = +2 Query: 128 KEQEMVIGRPTDVKHVAHIGWSSSTPGTLTGNASPSWMNVIEGSSDFSS 274 +E+EMVIG PTDVKHVAHIGW ST T + SW SS S+ Sbjct: 93 EEREMVIGLPTDVKHVAHIGWDGSTN---TTTSLRSWNRAAPPSSSASA 138
>AK099317:Os07g0446000 | Length = 251 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Frame = +2 Query: 134 QEMVIGRPTDVKHVAHIGWSS-STPGTLTGNA-SPSWMN-----VIEGSSDFSSMGYFAP 292 Q+M IG PTDVKHVAHIGW S P A +PSWM ++ +S S G Sbjct: 27 QDMQIGFPTDVKHVAHIGWDGPSVPNNNNNTAGAPSWMKDYHSAPLDSASFRSDRG--GS 84 Query: 293 SAGTSWTSQD 322 +A W SQ+ Sbjct: 85 AAANPWASQE 94
>AK072251:Os07g0446000 | Length = 251 Score = 47.4 bits (111), Expect = 1e-05 Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Frame = +2 Query: 134 QEMVIGRPTDVKHVAHIGWSS-STPGTLTGNA-SPSWMN-----VIEGSSDFSSMGYFAP 292 Q+M IG PTDVKHVAHIGW S P A +PSWM ++ +S S G Sbjct: 27 QDMQIGFPTDVKHVAHIGWDGPSVPNNNNNTAGAPSWMKDYHSAPLDSASFRSDRG--GS 84 Query: 293 SAGTSWTSQD 322 +A W SQ+ Sbjct: 85 AAANPWASQE 94
>AK119609:Os03g0847900 | Length = 166 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +2 Query: 128 KEQEMVIGRPTDVKHVAHIGW 190 +E+EMVIG PTDV+HV HIGW Sbjct: 113 EEREMVIGYPTDVQHVGHIGW 133
>AK061411:Os03g0847900 | Length = 166 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +2 Query: 128 KEQEMVIGRPTDVKHVAHIGW 190 +E+EMVIG PTDV+HV HIGW Sbjct: 113 EEREMVIGYPTDVQHVGHIGW 133
>AK101984:Os04g0577200 | Length = 479 Score = 32.3 bits (72), Expect = 0.32 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +2 Query: 128 KEQEMVIGRPTDVKHVAHI 184 +E+ M IGRPTDV+HV+H+ Sbjct: 89 EEEGMEIGRPTDVRHVSHV 107
>AY364311:Os02g0679500 | Length = 439 Score = 30.0 bits (66), Expect = 1.6 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = +2 Query: 140 MVIGRPTDVKHVAHI 184 M IGRPTDV+HV+H+ Sbjct: 62 MQIGRPTDVRHVSHV 76
>AK110069: | Length = 788 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/79 (29%), Positives = 30/79 (37%) Frame = -1 Query: 591 ICSLVYQDITLLVSMASTTLVATVEADADESFVADELTREPTTXXXXXXXXXXXXXGTSG 412 + V +T V +++ TLV TV + V E+ T T G Sbjct: 488 VVEAVSSPVTEKVHVSTETLVYTVGTGSTAHAVTTEVATTSTETIYKTVYV------TKG 541 Query: 411 YRAADTSSPVISEAIPRGN 355 Y A S V SEA P GN Sbjct: 542 YETAPASKEVASEAAPTGN 560
>AK120397:Os03g0775200 | Length = 729 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +3 Query: 297 QGPPGRPKTSSSITSRHETCCLSGWLRRSP 386 +GPPGRP SS CL W RR P Sbjct: 5 RGPPGRPAASSG--------CLGCWRRRPP 26
>AK108137:Os01g0967200 | Length = 258 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +2 Query: 128 KEQEMVIGRPTDVKHVAHI 184 ++ M IG PTDV+HVAH+ Sbjct: 21 QQPPMEIGWPTDVRHVAHV 39
>Os12g0485900:Os12g0485900 | Length = 1298 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 245 VIEGSSDFSSMGYFAPSAGTSWTSQDFEQHHQPPRDMLPL 364 +I G++ F S+ YF+ + G T+ +FE+ P + L L Sbjct: 1160 IIHGNNRFISLKYFSLAIGACGTALEFEEGSMPKVEHLKL 1199
>Os06g0291100:Os06g0291100 | Length = 323 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 131 EQEMVIGRPTDVKHVAHIGWSSSTPGTLTGNASPSW 238 +QE V+G P ++H GW+S T G +W Sbjct: 201 DQEAVLGHPAVGLFLSHSGWNSVTEAAAAGVPLLAW 236
>AY364310:Os12g0533400 | Length = 364 Score = 28.1 bits (61), Expect = 6.0 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 140 MVIGRPTDVKHVAHI 184 M IG PTDV+HVAH+ Sbjct: 1 MEIGWPTDVRHVAHV 15
>AK103596:Os07g0408500 | Length = 487 Score = 28.1 bits (61), Expect = 6.0 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 140 MVIGRPTDVKHVAHI 184 M IG PTDV+HVAH+ Sbjct: 74 MEIGWPTDVRHVAHV 88
>AK065886:Os02g0108000 | Length = 167 Score = 28.1 bits (61), Expect = 6.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 279 ATSRRPQGPPGRPKTSSSITSRHETCCLSG 368 A +RRP+G GR TS+ T CC +G Sbjct: 138 AAARRPRGRRGRAATSARKTPPRARCCGAG 167
>AK110199: | Length = 1093 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +2 Query: 152 RPTDVKHVAHIGWSSSTPGTLTGNASPSWMNVIEGSSDFSSMGYFAPSAGTSWTSQDFEQ 331 RP + +++ST L+ A + + + SS +S + +P+ ++ +S E Sbjct: 42 RPRTSSSAVNPAYAASTSNLLSPPARGNSFSDLLRSSSYSQVNLHSPANNSTSSSPHRES 101 Query: 332 HHQPPRDMLPLGMAS 376 +PPR MAS Sbjct: 102 PSRPPRQATSTHMAS 116
>AK071807:Os11g0153400 | Length = 479 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 140 MVIGRPTDVKHVAHI 184 M IG PTDV+HVAH+ Sbjct: 89 MEIGWPTDVQHVAHV 103
>AK067300:Os12g0155200 | Length = 193 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 140 MVIGRPTDVKHVAHI 184 M IG PTDV+HVAH+ Sbjct: 65 MEIGWPTDVQHVAHV 79
>AK062283:Os01g0686200 | Length = 426 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +2 Query: 131 EQEMVIGRPTDVKHVAHIGWSSSTPGTLTG---NASPSWMNVI 250 EQ V+ P V H GW+S+T G A P+W + I Sbjct: 337 EQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAYPAWSDQI 379 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,557,755 Number of extensions: 368486 Number of successful extensions: 1188 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1184 Number of HSP's successfully gapped: 21 Length of query: 233 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 136 Effective length of database: 11,515,878 Effective search space: 1566159408 Effective search space used: 1566159408 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
