ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42e17 |
|---|---|
| Clone Library Name | barley_pub |
>Q08474:VAM10_YEAST Vacuolar morphogenesis protein 10 - Saccharomyces cerevisiae| (Baker's yeast) Length = 114 Score = 32.7 bits (73), Expect = 3.5 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -3 Query: 440 SCAVQKSPKRENTKGLHQSSGCGLEGTQRPAFFHGGA 330 SC+ K R + L SS CGL T +P FH GA Sbjct: 51 SCSGAKELIRSSALELSCSSSCGLPATDKPGSFHSGA 87
>Q15772:SPEG_HUMAN Striated muscle preferentially expressed protein kinase - Homo| sapiens (Human) Length = 3223 Score = 32.7 bits (73), Expect = 3.5 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 13/133 (9%) Frame = -2 Query: 423 IPKKGEHK--GATSKFRLWARGNAAASLLPRRGGKLTQEGNGES---EL------GNGQR 277 +P G+ GA+ + RG++A S LPR G + G ++ EL G G Sbjct: 1992 LPSPGQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRSPGPGAT 2051 Query: 276 QRIENRQGDPARTRALYRRIMKLLLGGRSNHRRGGLRNRMAEA-PGRA-SPLRRKAADLI 103 + G+ + L +LL GG + + GLR + E+ GRA P +AA Sbjct: 2052 RLARGGLGEGEYAQRLQALRQRLLRGGPEDGKVSGLRGPLLESLGGRARDPRMARAASSE 2111 Query: 102 CFARRPPPTSERG 64 PP RG Sbjct: 2112 AAPHHQPPLENRG 2124
>P52909:JUND_RAT Transcription factor jun-D - Rattus norvegicus (Rat)| Length = 341 Score = 32.3 bits (72), Expect = 4.5 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +3 Query: 123 GAGARPSPELRPSDSAARLCDGSISRPAVISLSSYIGLEFGPDPPGGSRSVDAARFPIQI 302 GA A P+P +D AA G+ P +LSS+ G G PPGG+ +V A P+ Sbjct: 162 GAPAPPAP----ADLAAT--PGATETPVYANLSSFAG---GAGPPGGAATVAFAAEPVPF 212 Query: 303 P 305 P Sbjct: 213 P 213
>P15066:JUND_MOUSE Transcription factor jun-D - Mus musculus (Mouse)| Length = 341 Score = 32.3 bits (72), Expect = 4.5 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = +3 Query: 123 GAGARPSPELRPSDSAARLCDGSISRPAVISLSSYIGLEFGPDPPGGSRSVDAARFPIQI 302 GA A P+P +D AA G+ P +LSS+ G G PPGG+ +V A P+ Sbjct: 162 GAPAPPAP----ADLAAT--PGATETPVYANLSSFAG---GAGPPGGAATVAFAAEPVPF 212 Query: 303 P 305 P Sbjct: 213 P 213
>Q99150:SRP54_YARLI Signal recognition particle 54 kDa protein homolog - Yarrowia| lipolytica (Candida lipolytica) Length = 536 Score = 32.3 bits (72), Expect = 4.6 Identities = 22/71 (30%), Positives = 30/71 (42%) Frame = -2 Query: 354 ASLLPRRGGKLTQEGNGESELGNGQRQRIENRQGDPARTRALYRRIMKLLLGGRSNHRRG 175 AS+ R GGK NG R++N Q +PA+ A RR +++ GG Sbjct: 426 ASMASRMGGK------------NGMMSRMQNAQNNPAQMAAAQRRAQQMMGGGAGGMPGM 473 Query: 174 GLRNRMAEAPG 142 G M PG Sbjct: 474 GGMPGMGGMPG 484
>Q6UXD7:MFSD7_HUMAN Major facilitator superfamily domain-containing protein 7 - Homo| sapiens (Human) Length = 560 Score = 32.0 bits (71), Expect = 5.9 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 1/72 (1%) Frame = +3 Query: 642 DRRGRGEPGCYXXXXXXXXXXXXXXXXENNTGAGEEHPTTHRAHPEPPG-AATALPWQQQ 818 DR G G G E+ G G HP HRA P G AAT P + Sbjct: 473 DRGGAGRAGVLGPSTATPECTARGASLEDPRGPGSPHPACHRATPRAQGPAATDAPSRPG 532 Query: 819 HCSGCLLDSVFI 854 +G + S FI Sbjct: 533 RLAGRVQASRFI 544
>Q5R866:KLD7A_PONPY Kelch domain-containing protein 7A precursor - Pongo pygmaeus| (Orangutan) Length = 937 Score = 32.0 bits (71), Expect = 5.9 Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 16/130 (12%) Frame = -3 Query: 416 KRENTKGLHQSSGCGLEGTQRPAFFHGGAANSRRKEMGNLNWETGSVNGS---------- 267 +R ++KG GC E + P GA ++ RK + E GS Sbjct: 68 RRRSSKGAEAPQGCSCENPRGPYVLVTGATSTDRKSQRKGSGEERGGQGSDSEQVPPCCR 127 Query: 266 ----RTARGIRPELE--PYIGG**NYCWAGDRTIAEAGCGIGWPKLRGGPRPCAEKPRI* 105 RTA G P+ P +G N AG A+ C G P +P E P + Sbjct: 128 SQETRTAVGGNPDPPHLPRLGSEPNSSPAGLIAAADGSCAGGEPSPPQDSKP-PEHPGLG 186 Query: 104 SASPAGRHQP 75 P H P Sbjct: 187 QLEPPHCHHP 196
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 31.6 bits (70), Expect = 7.8 Identities = 37/140 (26%), Positives = 53/140 (37%) Frame = -2 Query: 540 PETCRNTWPPSAHFTISSPAAKQSVQHRRA*CLFMCSTKIPKKGEHKGATSKFRLWARGN 361 PE+ + P +H ISS ++ H RA + H S+ +R Sbjct: 438 PESPKPAPAPGSHREISSSPTSKNRSHGRA----------KRDKSHSHTPSRRMGRSRSP 487 Query: 360 AAASLLPRRGGKLTQEGNGESELGNGQRQRIENRQGDPARTRALYRRIMKLLLGGRSNHR 181 A A R T+ G+ S +R R R G R+R+ RR RS R Sbjct: 488 ATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWG---RSRSPQRRGR-----SRSPQR 539 Query: 180 RGGLRNRMAEAPGRASPLRR 121 G R+R + GR+ RR Sbjct: 540 PGWSRSRNTQRRGRSRSARR 559
>Q9UGU5:HM2L1_HUMAN High mobility group protein 2-like 1 - Homo sapiens (Human)| Length = 601 Score = 27.7 bits (60), Expect(2) = 8.2 Identities = 20/87 (22%), Positives = 33/87 (37%) Frame = -3 Query: 557 VSSSCSQRPAETHGHHQLISQSPAQPRSNLYSTDEPNAYSCAVQKSPKRENTKGLHQSSG 378 VS S + P E G H+ P + + EP+ + SPK + + + + S Sbjct: 152 VSGSSGELPLEDGGSHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVDEES- 210 Query: 377 CGLEGTQRPAFFHGGAANSRRKEMGNL 297 + + A + S R E G L Sbjct: 211 --FQYPSQQATVKKSSKKSARDEQGAL 235 Score = 22.3 bits (46), Expect(2) = 8.2 Identities = 11/40 (27%), Positives = 18/40 (45%) Frame = -1 Query: 223 EDNEITAGREIEPSQRRAAESDGRSSGEGLAPAPKSRGSD 104 E + G E++ + A + SS +P P+ GSD Sbjct: 231 EQGALLLGHELQSFLKTARKKHKSSSDAHSSPGPEGCGSD 270 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 228,407,017 Number of extensions: 5179106 Number of successful extensions: 15367 Number of sequences better than 10.0: 9 Number of HSP's gapped: 15348 Number of HSP's successfully gapped: 10 Length of query: 440 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 324 Effective length of database: 68,868,219 Effective search space: 22313302956 Effective search space used: 22313302956 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
