ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf38j12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099559:Os01g0711600 | 417 | e-117 | 2 | AK102316:Os05g0539800 | 363 | e-101 | 3 | AK061570:Os05g0539800 | 363 | e-101 | 4 | AK071709:Os03g0799500 | 243 | 1e-64 | 5 | Os05g0388400:Os05g0388400 | 31 | 1.4 | 6 | AK110697:Os01g0144800 | 30 | 3.1 | 7 | AK121288:Os03g0226600 | 29 | 4.1 | 8 | AK069173:Os03g0226600 | 29 | 4.1 | 9 | Os09g0569800:Os09g0569800 | 29 | 5.3 | 10 | AK119371:Os08g0520400 | 29 | 5.3 | 11 | AK108053:Os05g0509400 | 29 | 5.3 | 12 | AK106827:Os05g0570200 | 29 | 5.3 | 13 | AK102428:Os08g0520400 | 29 | 5.3 | 14 | AK064309:Os08g0520400 | 29 | 5.3 | 15 | Os04g0512100:Os04g0512100 | 28 | 6.9 | 16 | Os02g0236500:Os02g0236500 | 28 | 6.9 | 17 | X84649:Os03g0766100 | 28 | 6.9 | 18 | X15231:Os03g0766100 | 28 | 6.9 | 19 | AK119301:Os07g0571100 | 28 | 6.9 | 20 | AK108254:Os03g0766100 | 28 | 6.9 | 21 | AK099771:Os07g0571100 | 28 | 6.9 | 22 | AK109979: | 28 | 9.1 |
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>AK099559:Os01g0711600 | Length = 241 Score = 417 bits (1073), Expect = e-117 Identities = 189/235 (80%), Positives = 206/235 (87%) Frame = +1 Query: 136 SSMEAEAAFDVEDSRSNDELQELWPVGEIDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGI 315 SSM+A AAFD ED+ S++ LQELWPVGEIDPKR RFPCCIVWTPLP+VSWLAPYIGH GI Sbjct: 7 SSMDAGAAFDDEDASSSNSLQELWPVGEIDPKRARFPCCIVWTPLPIVSWLAPYIGHAGI 66 Query: 316 CQEDGSVLDFAGSNFVSMDNFAYGSVARYLQLDRKKCCFPANLGAHVCESTYKHTEVGTA 495 C+EDG+VLDFAGSN VSMDNFAYGS+ARYLQLDRKKCCFP NL HVCE +YKH E GTA Sbjct: 67 CREDGTVLDFAGSNLVSMDNFAYGSIARYLQLDRKKCCFPVNLATHVCERSYKHAEAGTA 126 Query: 496 TSWDSTLQLGTRHFQHKYYNLFTCNCYSFVANCLNRLAHGGSAEWNVLNVAALVWLHGEW 675 SWD LQLG R F HK+YNLFTCNCYSFVANCLNRLA+ GS +WNVLNVAALVWL G+W Sbjct: 127 ISWDDALQLGMRSFGHKFYNLFTCNCYSFVANCLNRLAYNGSVKWNVLNVAALVWLRGQW 186 Query: 676 VDKMSVVRSFAPFVTVTCIGIFMAGWSFLIGLSAFCLLLIGWFVFAVYCTKGLVC 840 VDKMSVVRSF PF+TVTC+GI MAGW FLIG++AF LLIGWFVFAVYC K LVC Sbjct: 187 VDKMSVVRSFFPFLTVTCVGILMAGWPFLIGMAAFSSLLIGWFVFAVYCMKDLVC 241
>AK102316:Os05g0539800 | Length = 233 Score = 363 bits (933), Expect = e-101 Identities = 164/233 (70%), Positives = 190/233 (81%) Frame = +1 Query: 142 MEAEAAFDVEDSRSNDELQELWPVGEIDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGICQ 321 ME EAA S++E+QELWP+GE+D K RFPCCIVWTPLPVVSWLAPYIGHVGI + Sbjct: 1 MEVEAACGDGVVSSSNEMQELWPLGEVDQKGTRFPCCIVWTPLPVVSWLAPYIGHVGIAR 60 Query: 322 EDGSVLDFAGSNFVSMDNFAYGSVARYLQLDRKKCCFPANLGAHVCESTYKHTEVGTATS 501 EDG+V+DFAGSNFVS+D+ AYGS ARYLQLDR+KCCFPANL AHVC +Y+H+E GTA S Sbjct: 61 EDGTVMDFAGSNFVSVDDLAYGSAARYLQLDRRKCCFPANLAAHVCARSYEHSEAGTAIS 120 Query: 502 WDSTLQLGTRHFQHKYYNLFTCNCYSFVANCLNRLAHGGSAEWNVLNVAALVWLHGEWVD 681 WD LQ G R F+HK YNLFTCN +SFVA+CLNRLA+GGS WNVLN+AALVWL G W+ Sbjct: 121 WDDALQSGARRFEHKCYNLFTCNSHSFVASCLNRLAYGGSVGWNVLNLAALVWLRGRWLG 180 Query: 682 KMSVVRSFAPFVTVTCIGIFMAGWSFLIGLSAFCLLLIGWFVFAVYCTKGLVC 840 KM+VVRS PF V C+G+ MAGWSFLI ++AF LL+GWFV VYC KGLVC Sbjct: 181 KMAVVRSLLPFAAVACVGVLMAGWSFLISMAAFSSLLLGWFVLGVYCFKGLVC 233
>AK061570:Os05g0539800 | Length = 233 Score = 363 bits (933), Expect = e-101 Identities = 164/233 (70%), Positives = 190/233 (81%) Frame = +1 Query: 142 MEAEAAFDVEDSRSNDELQELWPVGEIDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGICQ 321 ME EAA S++E+QELWP+GE+D K RFPCCIVWTPLPVVSWLAPYIGHVGI + Sbjct: 1 MEVEAACGDGVVSSSNEMQELWPLGEVDQKGTRFPCCIVWTPLPVVSWLAPYIGHVGIAR 60 Query: 322 EDGSVLDFAGSNFVSMDNFAYGSVARYLQLDRKKCCFPANLGAHVCESTYKHTEVGTATS 501 EDG+V+DFAGSNFVS+D+ AYGS ARYLQLDR+KCCFPANL AHVC +Y+H+E GTA S Sbjct: 61 EDGTVMDFAGSNFVSVDDLAYGSAARYLQLDRRKCCFPANLAAHVCARSYEHSEAGTAIS 120 Query: 502 WDSTLQLGTRHFQHKYYNLFTCNCYSFVANCLNRLAHGGSAEWNVLNVAALVWLHGEWVD 681 WD LQ G R F+HK YNLFTCN +SFVA+CLNRLA+GGS WNVLN+AALVWL G W+ Sbjct: 121 WDDALQSGARRFEHKCYNLFTCNSHSFVASCLNRLAYGGSVGWNVLNLAALVWLRGRWLG 180 Query: 682 KMSVVRSFAPFVTVTCIGIFMAGWSFLIGLSAFCLLLIGWFVFAVYCTKGLVC 840 KM+VVRS PF V C+G+ MAGWSFLI ++AF LL+GWFV VYC KGLVC Sbjct: 181 KMAVVRSLLPFAAVACVGVLMAGWSFLISMAAFSSLLLGWFVLGVYCFKGLVC 233
>AK071709:Os03g0799500 | Length = 204 Score = 243 bits (620), Expect = 1e-64 Identities = 110/206 (53%), Positives = 146/206 (70%) Frame = +1 Query: 220 IDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGICQEDGSVLDFAGSNFVSMDNFAYGSVAR 399 IDP+R RFPCCIVWTPLP++SWL P+IGH+GIC+EDG +LDFAG NFVS+DNFA+G+VAR Sbjct: 11 IDPRRARFPCCIVWTPLPLISWLIPFIGHIGICREDGVILDFAGPNFVSVDNFAFGAVAR 70 Query: 400 YLQLDRKKCCFPANLGAHVCESTYKHTEVGTATSWDSTLQLGTRHFQHKYYNLFTCNCYS 579 Y+Q++ +C YK E A++WD L+ G + FQH+ Y+LFTCNC+S Sbjct: 71 YIQVNSDEC--------------YKLLEPEGASTWDDALRKGVQEFQHRGYSLFTCNCHS 116 Query: 580 FVANCLNRLAHGGSAEWNVLNVAALVWLHGEWVDKMSVVRSFAPFVTVTCIGIFMAGWSF 759 FV N LNRL + G +WNV+++AA+++L G WV SVV++F PF V IG + G +F Sbjct: 117 FVVNNLNRLFYSGHDKWNVVSLAAVMFLRGRWVSTASVVKTFFPFALVITIGTLLGGATF 176 Query: 760 LIGLSAFCLLLIGWFVFAVYCTKGLV 837 LIGL AF ++ GWF+ YC K LV Sbjct: 177 LIGLLAFAAVMTGWFLVGTYCIKSLV 202
>Os05g0388400:Os05g0388400 | Length = 571 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = +3 Query: 240 IPLLHCLDSSSCSFMA--CSLHRPCWNLSGGWI----CPGFCWFKFCEH 368 +P + S FM C L+R CWNL+GG + PG + C H Sbjct: 352 VPPVVAFSLGSLGFMTPFCILNRWCWNLAGGSMVHPQVPGILFTPICPH 400
>AK110697:Os01g0144800 | Length = 124 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 694 RQTFCPPIRREARQELPHSKHSTPPNRRGQAGSGSLL 584 RQ CPP RR QE +H P R G G G+ L Sbjct: 67 RQPGCPPCRR---QEAVIHRHPAAPRRHGFIGGGAAL 100
>AK121288:Os03g0226600 | Length = 1176 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -3 Query: 233 LFGSISPTGHNSCSSSFDLESSTSKAASASIEENTS 126 + S S G +SC+S D ESSTS S S + S Sbjct: 869 MMNSTSSDGLSSCTSEADRESSTSSVTSLSAQHQES 904
>AK069173:Os03g0226600 | Length = 898 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -3 Query: 233 LFGSISPTGHNSCSSSFDLESSTSKAASASIEENTS 126 + S S G +SC+S D ESSTS S S + S Sbjct: 591 MMNSTSSDGLSSCTSEADRESSTSSVTSLSAQHQES 626
>Os09g0569800:Os09g0569800 | Length = 858 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 325 PPDRFQHGLCKEQAMKLQEEESRQCNK 245 P DR GLCK A +L+E+E R K Sbjct: 103 PADRIMSGLCKVPAKQLEEKELRAYRK 129
>AK119371:Os08g0520400 | Length = 466 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +1 Query: 7 GPIYGHQIAEEPAVSC-PFSAKVSRVMRCKLI*FFI 111 GP+ G + E+ AV C P SA++ R +R K + F + Sbjct: 173 GPVVGEMVVEDVAVDCAPRSAELRRRLRFKRMPFLV 208
>AK108053:Os05g0509400 | Length = 374 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -1 Query: 718 SRMARMTERQTFCPPIRREARQELPHSKHSTPPNRRGQAGSGSLLRMSNSC--R*TGCSI 545 SR RM+ + EA ++ HS STPP R S L+ C TGCS+ Sbjct: 137 SRQKRMSLKINRRSEANAEAVEDAHHSSSSTPPRRGCNCKKSSCLKKYCDCYQDGTGCSL 196
>AK106827:Os05g0570200 | Length = 308 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +1 Query: 256 VWTPLPVVSWLAPYIGHVGICQEDGSVLDFAG--SNFVSMDNFAYGSVARYLQLDRKKC 426 VWTP+P + ++GH C + +F G +D+ + SV+R +Q C Sbjct: 199 VWTPVPTLVGRMLFVGHG--CSRSYELANFPGFQEGIYFLDDLQFYSVSRIVQYQEYLC 255
>AK102428:Os08g0520400 | Length = 466 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +1 Query: 7 GPIYGHQIAEEPAVSC-PFSAKVSRVMRCKLI*FFI 111 GP+ G + E+ AV C P SA++ R +R K + F + Sbjct: 173 GPVVGEMVVEDVAVDCAPRSAELRRRLRFKRMPFLV 208
>AK064309:Os08g0520400 | Length = 466 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +1 Query: 7 GPIYGHQIAEEPAVSC-PFSAKVSRVMRCKLI*FFI 111 GP+ G + E+ AV C P SA++ R +R K + F + Sbjct: 173 GPVVGEMVVEDVAVDCAPRSAELRRRLRFKRMPFLV 208
>Os04g0512100:Os04g0512100 | Length = 420 Score = 28.5 bits (62), Expect = 6.9 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Frame = +1 Query: 52 CPFSAKVSRVMRCKLI*FFICSTSTEVFSSMEAEAAF---DVEDSR------SNDELQEL 204 C ++KV+R L C +V + E E V +SR SNDE ++ Sbjct: 154 CGSNSKVTRATAIAL-----CQRGVQVILNQEKEYGMLKSRVPESRAIYLKFSNDETPQI 208 Query: 205 WPVGEIDPKRGRFPCCIVWTP 267 W ID +GR P ++ P Sbjct: 209 WIGDSIDDAQGRAPKGTIFIP 229
>Os02g0236500:Os02g0236500 | Length = 1084 Score = 28.5 bits (62), Expect = 6.9 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Frame = -1 Query: 688 TFCPPIRREARQELPH-------SKHSTPPNRRGQAGSGSLLRMSNSCR*TGCSICAGNV 530 + CP +R E R E P S S+PP + A S R C++CA Sbjct: 869 SLCPRVR-ERRAERPSPSLSFSPSLVSSPPAKPAPAHHCSRARPRGRRPRRACAVCAARP 927 Query: 529 LCPVARYYPRMLLFQLLCACTSTRIHVPP 443 CP A R Q C +T+ PP Sbjct: 928 RCPAAPTAARP-RSQRACPSRATQSAAPP 955
>X84649:Os03g0766100 | Length = 134 Score = 28.5 bits (62), Expect = 6.9 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = -2 Query: 558 QVVVFVLEMSCAQLQGTIPGCCCSNFCVLVRRL 460 Q + + + C QLQG +P C C C +++ + Sbjct: 63 QPMALLQQQCCMQLQGMMPQCHCGTSCQMMQSM 95
>X15231:Os03g0766100 | Length = 134 Score = 28.5 bits (62), Expect = 6.9 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = -2 Query: 558 QVVVFVLEMSCAQLQGTIPGCCCSNFCVLVRRL 460 Q + + + C QLQG +P C C C +++ + Sbjct: 63 QPMALLQQQCCMQLQGMMPQCHCGTSCQMMQSM 95
>AK119301:Os07g0571100 | Length = 1089 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +1 Query: 172 DSRSNDELQELWPVGEIDPKRGRFPCCIVWTPLPVVSWLA--PYIGHVG 312 + R LQ+ P EI ++ P P+PV SWL P G++G Sbjct: 415 ERRPQPALQQQKPKNEIKHEKSAMPAVTPPMPIPVGSWLGSFPPFGYLG 463
>AK108254:Os03g0766100 | Length = 134 Score = 28.5 bits (62), Expect = 6.9 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = -2 Query: 558 QVVVFVLEMSCAQLQGTIPGCCCSNFCVLVRRL 460 Q + + + C QLQG +P C C C +++ + Sbjct: 63 QPMALLQQQCCMQLQGMMPQCHCGTSCQMMQSM 95
>AK099771:Os07g0571100 | Length = 1042 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +1 Query: 172 DSRSNDELQELWPVGEIDPKRGRFPCCIVWTPLPVVSWLA--PYIGHVG 312 + R LQ+ P EI ++ P P+PV SWL P G++G Sbjct: 34 ERRPQPALQQQKPKNEIKHEKSAMPAVTPPMPIPVGSWLGSFPPFGYLG 82
>AK109979: | Length = 934 Score = 28.1 bits (61), Expect = 9.1 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = -1 Query: 385 HMQNYPCSQNLNQQNPGQIHPPDRFQHGLCKEQAMKLQEEESRQCNKGIALSLGL-SHQL 209 HMQ + Q +QQ Q HP Q +++S+Q + L HQL Sbjct: 8 HMQPHMAQQQQSQQQQQQQHPGAMQNAANFAMQPSVYAQQQSQQMQPPPSHQQQLQQHQL 67 Query: 208 ATTPAVHRLIWNLQHRKQLQ 149 H++ LQH++Q Q Sbjct: 68 QQQHHQHQMQQQLQHQQQQQ 87 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,058,563 Number of extensions: 783565 Number of successful extensions: 2583 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2580 Number of HSP's successfully gapped: 22 Length of query: 307 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 207 Effective length of database: 11,395,755 Effective search space: 2358921285 Effective search space used: 2358921285 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
