ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38j12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9H0R3:CA160_HUMAN Uncharacterized protein C1orf160 - Homo sapie... 124 4e-28
2Q8BVA2:CA160_MOUSE Uncharacterized protein C1orf160 homolog - Mu... 121 3e-27
3Q6P828:LITAF_XENTR Lipopolysaccharide-induced tumor necrosis fac... 35 0.56
4P47033:PRY3_YEAST Protein PRY3 - Saccharomyces cerevisiae (Baker... 32 4.7
5Q9ER04:TMPS5_MOUSE Transmembrane protease, serine 5 - Mus muscul... 31 6.1
6Q10268:MAC1_SCHPO Membrane-anchored protein 1 precursor - Schizo... 31 6.1
7P36170:YK82_YEAST Putative uncharacterized protein YKR102W precu... 31 8.0
8Q6W4X9:MUC6_HUMAN Mucin-6 precursor - Homo sapiens (Human) 31 8.0
9Q8N8Z8:ZN441_HUMAN Zinc finger protein 441 - Homo sapiens (Human) 31 8.0
10Q9CT10:RANB3_MOUSE Ran-binding protein 3 - Mus musculus (Mouse) 31 8.0

>Q9H0R3:CA160_HUMAN Uncharacterized protein C1orf160 - Homo sapiens (Human)|
          Length = 208
 Score =  124 bits (312), Expect = 4e-28
 Identities = 62/175 (35%), Positives = 99/175 (56%)
 Frame = +1

Query: 220 IDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGICQEDGSVLDFAGSNFVSMDNFAYGSVAR 399
           +D +R RFP C+VWTP+PV++W  P IGH+GIC   G + DFAG  FVS DN A+G  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 400 YLQLDRKKCCFPANLGAHVCESTYKHTEVGTATSWDSTLQLGTRHFQHKYYNLFTCNCYS 579
           Y +LD      PA + A                +WD+ +   +  ++H+ +NL   NC+S
Sbjct: 105 YWKLD------PAQVYA------------SGPNAWDTAVHDASEEYKHRMHNLCCDNCHS 146

Query: 580 FVANCLNRLAHGGSAEWNVLNVAALVWLHGEWVDKMSVVRSFAPFVTVTCIGIFM 744
            VA  LN + +  S  WN++ +     L+G++V   + V+++ PF+ +  +GI +
Sbjct: 147 HVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILL--LGIIL 199



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>Q8BVA2:CA160_MOUSE Uncharacterized protein C1orf160 homolog - Mus musculus (Mouse)|
          Length = 208

 Score =  121 bits (304), Expect = 3e-27
 Identities = 60/175 (34%), Positives = 98/175 (56%)
 Frame = +1

Query: 220 IDPKRGRFPCCIVWTPLPVVSWLAPYIGHVGICQEDGSVLDFAGSNFVSMDNFAYGSVAR 399
           +D +R RFP C+VWTP+PV++W  P IGH+GIC   G + DFAG  FVS DN A+G  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 400 YLQLDRKKCCFPANLGAHVCESTYKHTEVGTATSWDSTLQLGTRHFQHKYYNLFTCNCYS 579
           + +LD      P  + A                +WD+ +   +  ++H+ +NL   NC+S
Sbjct: 105 FWKLD------PGQVYA------------SGPNAWDTAVHDASEEYKHRMHNLCCDNCHS 146

Query: 580 FVANCLNRLAHGGSAEWNVLNVAALVWLHGEWVDKMSVVRSFAPFVTVTCIGIFM 744
            VA  LN + +  S  WN++ +     ++G++V   + V+++ PFV +  +GI +
Sbjct: 147 HVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLL--LGIIL 199



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>Q6P828:LITAF_XENTR Lipopolysaccharide-induced tumor necrosis factor-alpha factor|
           homolog - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis)
          Length = 148

 Score = 34.7 bits (78), Expect = 0.56
 Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
 Frame = -2

Query: 801 PPYQKQTECR*PY*ERPAGHKNTDARHSHEWRE*PNDRHFVHPFAVKPDKSCHIQNIPLR 622
           P Y++ T    PY   P  H+  DA++        N  + V P  ++P  +     +   
Sbjct: 21  PSYEEATFHHPPY---PPLHQGMDAKNMS------NPPYIVQPVPMQPPVTVQTVYVQQA 71

Query: 621 RTAVGKPVQAVCYE*---VTVAGEQVVVFVLEMSCAQL--QGTIPGCCCSNFCV-LVRRL 460
            T   +PVQ  C      +T   E     +  +SC  L   G I GCC   FC+  ++ +
Sbjct: 72  MTLYDRPVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCCLIPFCIDSLKDV 131

Query: 459 AYMCP 445
            + CP
Sbjct: 132 DHYCP 136



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>P47033:PRY3_YEAST Protein PRY3 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 881

 Score = 31.6 bits (70), Expect = 4.7
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = -3

Query: 290 ASHETTGRGVQTMQQGNRPLFGSISPTGHNSCSSSF----DLESSTSKAASASIEENTSV 123
           +S   T   V +++  N  +F + + +  ++  SS     D++ STSK A++S+ E+TS+
Sbjct: 344 SSRSVTSNSVNSVKFANTTVFSAQTTSSVSASLSSSVAADDIQGSTSKEATSSVSEHTSI 403

Query: 122 L 120
           +
Sbjct: 404 V 404



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>Q9ER04:TMPS5_MOUSE Transmembrane protease, serine 5 - Mus musculus (Mouse)|
          Length = 455

 Score = 31.2 bits (69), Expect = 6.1
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 594 PEPACPR-RFGGVECFECGSSCLASRRMGGQNV 689
           P   CP  R   ++C ECG+  LASR +GGQ V
Sbjct: 192 PSANCPSGRIVSLKCSECGARPLASRIVGGQAV 224



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>Q10268:MAC1_SCHPO Membrane-anchored protein 1 precursor - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 756

 Score = 31.2 bits (69), Expect = 6.1
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = -3

Query: 284 HETTGRGVQTMQQGNRPLFGSIS-----PTGHNSCSSSFDLESSTSKAASASIEENTSVL 120
           HET   G    + GNRP F S++     PT     ++ FDLE   ++ A +   E T   
Sbjct: 305 HET--EGYCPHKTGNRPGFPSLNIPRTRPTTAGIANTQFDLEPYRNRQAGSISSEGTDSR 362

Query: 119 VEHIKNQMSL 90
              ++NQ+S+
Sbjct: 363 FFDVENQVSV 372



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>P36170:YK82_YEAST Putative uncharacterized protein YKR102W precursor - Saccharomyces|
            cerevisiae (Baker's yeast)
          Length = 1169

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
 Frame = -3

Query: 233  LFGSISPTGHNSCSSSFDLESSTSKAA-------SASIEENTSVLVEHIKNQMSLHLMTL 75
            ++ + SP   N  + S D+E+S SKA+       + SI  N + +       +  H  T 
Sbjct: 1031 VYSTWSPQATNKLAVSSDIENSASKASFVSEAAETKSISRNNNFVPTSGTTSIETHTTTT 1090

Query: 74   ETFAENGQETAGSSAI 27
               +EN    + S A+
Sbjct: 1091 SNASENSDNVSASEAV 1106



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>Q6W4X9:MUC6_HUMAN Mucin-6 precursor - Homo sapiens (Human)|
          Length = 2392

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 1/87 (1%)
 Frame = -3

Query: 836  TKPFVQYTA-KTNHPIRSKQNADNPIRKDQPAIKIPMHVTVTNGANDRTTDILSTHSP*S 660
            T+   +YT  +T H   S   A +P+    P      H T T          L TH P  
Sbjct: 1390 TRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPF 1449

Query: 659  QTRAATFKTFHSAEPPWASRFRQFATN 579
             T   T  T H+   P  ++    A+N
Sbjct: 1450 STSLVTPST-HTVITPTHAQMASSASN 1475



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>Q8N8Z8:ZN441_HUMAN Zinc finger protein 441 - Homo sapiens (Human)|
          Length = 626

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +1

Query: 460 ESTYKHTEVGTATSWDSTLQLGTRHFQH--KYYNLFTCNCYSFVANCLNRLA--HGGSAE 627
           E  Y HT+ GTA S+    Q+  R  QH  K Y+   C  +S + N    +A  HG    
Sbjct: 71  EKPYTHTQCGTAFSYQPCFQIHERP-QHGKKLYDCKECASFSSLENLQRHMAAHHGDGPR 129

Query: 628 WNVLNVAALVW 660
              L   A +W
Sbjct: 130 ICKLCGNAFIW 140



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>Q9CT10:RANB3_MOUSE Ran-binding protein 3 - Mus musculus (Mouse)|
          Length = 491

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
 Frame = -1

Query: 697 ERQTFCPPIRREARQELPHSKHST------PPNR-RGQAGSGSLLRMSNSCR*TGCSICA 539
           E   +CPP++RE    L HS+  +      PP    GQA S  L       +  G     
Sbjct: 43  EDGNYCPPVKRERTSSLTHSEEKSSGFRLKPPTLIHGQAPSAGLPSQKPREQQRG----- 97

Query: 538 GNVLCPVARYYPR-MLLFQLLCACTSTRIHVPPD*QESSTSFCPAGGI*RQNHMQNYPCS 362
             VL P     P+  +L Q + +  +  + +P D    +TS  P      +N  Q  P S
Sbjct: 98  --VLRPAVLQAPQPKVLSQTVPSSGTNGVSMPADCTGPATSVSP------ENLTQRSP-S 148

Query: 361 QNLNQQNPGQIHPPDRFQHGLCKE 290
           ++  + +  +   P +  HG  +E
Sbjct: 149 ESAEETHTLEEKVPQKTPHGTSEE 172


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 185,172,610
Number of extensions: 4427979
Number of successful extensions: 13802
Number of sequences better than 10.0: 10
Number of HSP's gapped: 13778
Number of HSP's successfully gapped: 10
Length of query: 307
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 194
Effective length of database: 69,691,104
Effective search space: 13520074176
Effective search space used: 13520074176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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