ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf42e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121376:Os03g0300400 | 144 | 1e-34 | 2 | AF395880:Os03g0300400 | 144 | 1e-34 | 3 | Os04g0593400:Os04g0593400 | 44 | 1e-04 | 4 | Os04g0593500:Os04g0593500 | 38 | 0.011 | 5 | AK120569:Os03g0184300 | 32 | 0.58 | 6 | AK064916:Os07g0529600 | 31 | 0.98 | 7 | AY224441:Os05g0460600 | 30 | 1.7 | 8 | AK119676:Os04g0465600 | 30 | 1.7 | 9 | AK072931:Os05g0460600 | 30 | 1.7 | 10 | AK059231:Os04g0465600 | 30 | 1.7 | 11 | AK099157:Os12g0555200 | 30 | 2.8 | 12 | AK070762:Os12g0555200 | 30 | 2.8 | 13 | AK110313: | 29 | 4.9 | 14 | AK108563:Os02g0629900 | 28 | 6.3 | 15 | AK063102:Os02g0551600 | 28 | 6.3 | 16 | AY224437:Os05g0223000 | 28 | 6.4 | 17 | Os05g0545900:Os05g0545900 | 28 | 8.3 | 18 | Os07g0462000:Os07g0462000 | 28 | 8.3 | 19 | AK107192:Os05g0319700 | 28 | 8.3 |
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>AK121376:Os03g0300400 | Length = 160 Score = 144 bits (362), Expect = 1e-34 Identities = 71/99 (71%), Positives = 79/99 (79%) Frame = +2 Query: 320 AAMPFNLMKERLEFIDVEKCECKSTLXXXXXXXXXXXXXXSHIKVEPTANGGSVVKVQST 499 +AMPF+ MKERLEF+DV+KCECKSTL SHIKVEP ANGGSVVKV+ST Sbjct: 62 SAMPFSHMKERLEFLDVDKCECKSTLVEGGGIGKAIETATSHIKVEPAANGGSVVKVEST 121 Query: 500 YKLLPGVEVNDEITKAKESVTAIFKAVEAFLVANPDAYN 616 YKLLPGVEV DEITKAKES+T IFK EA+L+ANPDAYN Sbjct: 122 YKLLPGVEVKDEITKAKESLTGIFKTAEAYLIANPDAYN 160 Score = 120 bits (300), Expect = 2e-27 Identities = 57/73 (78%), Positives = 64/73 (87%) Frame = +1 Query: 67 MASTNSWTHEIESPVAAPRLFRAGVMDWHTLAPKLAPHIVASAHPVEGEGGIGSVRQFNF 246 MASTNSWTHEIESPVAAPRLFRA VMDWHTLAPK+A HIVASAHPV+G+G +GSVRQFNF Sbjct: 1 MASTNSWTHEIESPVAAPRLFRAAVMDWHTLAPKIASHIVASAHPVDGDGSVGSVRQFNF 60 Query: 247 TAGTHNSCHLQSR 285 T+ S H++ R Sbjct: 61 TSAMPFS-HMKER 72
>AF395880:Os03g0300400 | Length = 160 Score = 144 bits (362), Expect = 1e-34 Identities = 71/99 (71%), Positives = 79/99 (79%) Frame = +2 Query: 320 AAMPFNLMKERLEFIDVEKCECKSTLXXXXXXXXXXXXXXSHIKVEPTANGGSVVKVQST 499 +AMPF+ MKERLEF+DV+KCECKSTL SHIKVEP ANGGSVVKV+ST Sbjct: 62 SAMPFSHMKERLEFLDVDKCECKSTLVEGGGIGKAIETATSHIKVEPAANGGSVVKVEST 121 Query: 500 YKLLPGVEVNDEITKAKESVTAIFKAVEAFLVANPDAYN 616 YKLLPGVEV DEITKAKES+T IFK EA+L+ANPDAYN Sbjct: 122 YKLLPGVEVKDEITKAKESLTGIFKTAEAYLIANPDAYN 160 Score = 120 bits (300), Expect = 2e-27 Identities = 57/73 (78%), Positives = 64/73 (87%) Frame = +1 Query: 67 MASTNSWTHEIESPVAAPRLFRAGVMDWHTLAPKLAPHIVASAHPVEGEGGIGSVRQFNF 246 MASTNSWTHEIESPVAAPRLFRA VMDWHTLAPK+A HIVASAHPV+G+G +GSVRQFNF Sbjct: 1 MASTNSWTHEIESPVAAPRLFRAAVMDWHTLAPKIASHIVASAHPVDGDGSVGSVRQFNF 60 Query: 247 TAGTHNSCHLQSR 285 T+ S H++ R Sbjct: 61 TSAMPFS-HMKER 72
>Os04g0593400:Os04g0593400 | Length = 161 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = +1 Query: 82 SWTHEIESPVAAPRLFRA-GVMDWHTLAPKLAPHIVASAHPVEGEGGIGSVRQFNFTAG 255 S +HE+E+ V A L++ G + L P+L PHI+A V G+GG+G++ + F G Sbjct: 4 SQSHELETDVPASELWKIYGTLRAAELLPELLPHILAKVELVTGDGGVGTIVRLTFPPG 62
>Os04g0593500:Os04g0593500 | Length = 171 Score = 37.7 bits (86), Expect = 0.011 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +1 Query: 91 HEIESPVAAPRLFRA-GVMDWHTLAPKLAPHIVASAHPVEGEGGIGSVRQFNFTAGTH 261 HE+E+ + A ++ G L P+L P + + VEG+GG+GSV F G H Sbjct: 7 HELETGLPAAEVWEVYGGFLVAQLLPQLVPEVFSKVELVEGDGGVGSVLHVVFAPGAH 64
>AK120569:Os03g0184300 | Length = 623 Score = 32.0 bits (71), Expect = 0.58 Identities = 28/83 (33%), Positives = 36/83 (43%) Frame = +1 Query: 439 VAHQGGADGQRRKRRQGAIDIQAVAGRGGER*DHQSQGVCHRDLQGR*GLPRCQPGRLQL 618 V H G DG+RR RQ + + VAG G E G HR+ + G+PR R+ Sbjct: 4 VCHWHGGDGRRRGGRQAVVVVVVVAGGGAE-------GGGHREAER--GVPRLLLPRV-- 52 Query: 619 NHATPALIFVCFLADPIKPLLSR 687 H P V P + LL R Sbjct: 53 -HGAPPPPQVLLPPRPRRRLLPR 74
>AK064916:Os07g0529600 | Length = 402 Score = 31.2 bits (69), Expect = 0.98 Identities = 22/54 (40%), Positives = 26/54 (48%) Frame = +3 Query: 90 PRDRIAGRRTAPLPCRRHGLAHTGP*ARTTHRRQCPSC*GRRRHRQCQAV*LHR 251 PR R RR A L RHG A G RR+ G RRH+ +A+ LHR Sbjct: 139 PRRRRVARRAAVL---RHGGAQAGAPVPRRARRRVRRAGGLRRHQARRALHLHR 189
>AY224441:Os05g0460600 | Length = 460 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -1 Query: 252 CGEVKLPDTAYAAFALNRMGTGDDVWCELRGQCVPVHDAGTEEARCGDR 106 C + KL T + A A +G G+DV + +C+ G+ CG++ Sbjct: 258 CYQSKLDGTEHIAVAKGDIGDGEDVLVRVHSECLTGDILGSARCDCGNQ 306
>AK119676:Os04g0465600 | Length = 157 Score = 30.4 bits (67), Expect = 1.7 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MASTNSWTHEIESPVAAPRLFRAGVMDWHTLAPKLAPHIVASAHPVEGEG-GIGSVRQFN 243 MAS E++SP A +L+ A + D L PK+ P S VEG+G G+VR Sbjct: 1 MASKVELVVEVKSP--ADKLWTA-LRDSTELFPKIFPEQYKSIETVEGDGKSAGTVRLLK 57 Query: 244 FTAG 255 +T G Sbjct: 58 YTEG 61
>AK072931:Os05g0460600 | Length = 536 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -1 Query: 252 CGEVKLPDTAYAAFALNRMGTGDDVWCELRGQCVPVHDAGTEEARCGDR 106 C + KL T + A A +G G+DV + +C+ G+ CG++ Sbjct: 334 CYQSKLDGTEHIAVAKGDIGDGEDVLVRVHSECLTGDILGSARCDCGNQ 382
>AK059231:Os04g0465600 | Length = 157 Score = 30.4 bits (67), Expect = 1.7 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MASTNSWTHEIESPVAAPRLFRAGVMDWHTLAPKLAPHIVASAHPVEGEG-GIGSVRQFN 243 MAS E++SP A +L+ A + D L PK+ P S VEG+G G+VR Sbjct: 1 MASKVELVVEVKSP--ADKLWTA-LRDSTELFPKIFPEQYKSIETVEGDGKSAGTVRLLK 57 Query: 244 FTAG 255 +T G Sbjct: 58 YTEG 61
>AK099157:Os12g0555200 | Length = 158 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +2 Query: 449 KVEPTANGGSVVKVQSTYKLLPGVEVNDEITKA-KESVTAIFKAVEAFLVANPDAY 613 K+E T + V K+ Y+L G ++ E K + ++ + +EA+LVA+P Y Sbjct: 102 KLEATGDATCVAKLTVEYELEDGASLSPEQEKMIVDGYFSMLQMIEAYLVAHPAEY 157
>AK070762:Os12g0555200 | Length = 158 Score = 29.6 bits (65), Expect = 2.8 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +2 Query: 449 KVEPTANGGSVVKVQSTYKLLPGVEVNDEITKA-KESVTAIFKAVEAFLVANPDAY 613 K+E T + V K+ Y+L G ++ E K + ++ + +EA+LVA+P Y Sbjct: 102 KLEATGDATCVAKLTVEYELEDGASLSPEQEKMIVDGYFSMLQMIEAYLVAHPAEY 157
>AK110313: | Length = 566 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +2 Query: 14 QQLHNSTHHFHLHRSS*QWLPPTAGPTRSNRRSPHRASSVPASWTGTHWPLSSHHTSSPV 193 QQ+H+++ +L S Q L P+A PT S S A+++P P S+P Sbjct: 184 QQMHSASLRANLQGSLQQLLRPSAHPTSSTTSSSSTATTLP-------HPHLQQQASNPA 236 Query: 194 P 196 P Sbjct: 237 P 237
>AK108563:Os02g0629900 | Length = 115 Score = 28.5 bits (62), Expect = 6.3 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +2 Query: 92 TRSNRRSPHRASSVPASWTG 151 TR RR+P R PA+WTG Sbjct: 41 TRGRRRAPARRPCTPATWTG 60
>AK063102:Os02g0551600 | Length = 216 Score = 28.5 bits (62), Expect = 6.3 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +2 Query: 68 WLPPTAGPTRSNR--RSPHRASSVPASW 145 +LPP P+ +R SP RASSVP SW Sbjct: 55 FLPPPTSPSPFHRFLPSPLRASSVPFSW 82
>AY224437:Os05g0223000 | Length = 189 Score = 28.5 bits (62), Expect = 6.4 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 439 VAHQGGADGQRRKRRQGAIDIQAVAGRG 522 VA G G+RR+RR+GA D AG G Sbjct: 12 VADAGEGGGRRRRRRRGAGDADGGAGAG 39
>Os05g0545900:Os05g0545900 | Length = 339 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -2 Query: 242 LNCLTLPMPPSPSTGWALATMCGASLGASVCQSMTPARKRR 120 L+ L P PPSPS A ++ + S C++ PARK+R Sbjct: 32 LDSLPPPPPPSPSQSGANSSTFLPAAAGSACEA--PARKKR 70
>Os07g0462000:Os07g0462000 | Length = 558 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 439 VAHQGGADGQRRKRR-QGAIDIQAVAGRGGER 531 VA GGA G+RR+RR + + + AGRG R Sbjct: 97 VAPDGGAAGRRRRRRGRPVVAVPTAAGRGRGR 128
>AK107192:Os05g0319700 | Length = 478 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = -1 Query: 534 SSFTSTPGNSLYVDCTLTTLPPLAVGSTLMCDVAVSIAVPMPPPSMRVDLHSHF 373 SS +S+ +S T+ T A + A+S AVP PPP + V +H HF Sbjct: 44 SSSSSSSSSSSPATSTVATGISAAAAAAANGTAALSSAVPAPPPVVIV-VHHHF 96 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,866,527 Number of extensions: 592041 Number of successful extensions: 2329 Number of sequences better than 10.0: 21 Number of HSP's gapped: 2323 Number of HSP's successfully gapped: 25 Length of query: 290 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 190 Effective length of database: 11,395,755 Effective search space: 2165193450 Effective search space used: 2165193450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
